F423271

General Info

Members Datasets Scaffolds Average Seq Length
364 178 364 263

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100127051|Ga0075431_1001270512
Length 285
Sequence VARFKLTVEYAGTRYSGWQIQKNARTVQGEIDRAVSAVTGRRDFELYGSGRTDAGVHALAQVAHLDVSTNLPPETLLRRINEELPADINILAATIVPHRFHARHDAVARRYLYQIARRRTAFAKPFVWWVKEPLDLQRMRLAANAFVGFKDFQSFAASDDVEADDARGVSGTRSTMVLVDRLEIVDAGELVLVGIEGSHFLWKMVRRIVGVLVEIGRGGLGPAVATTFLSVSSTAPARLTAPASGLFLESVRYKGEARDLPWRAATPLFTGHSSRTPSASRTTSP

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
114 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
115 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
116 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
120 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
121 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
122 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
123 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
137 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
154 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
175 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.73
Metatranscriptomes 0.27
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.1
Nodule 0
Rhizoplane 3.85
Rhizosphere 94.78
Stem 0
Stem Tuber 0
Unclassified 0.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10076994 3300005290 Bacteria 3566
2 Ga0065715_10002950 3300005293 Bacteria 7746
3 Ga0065715_10092382 3300005293 Bacteria 5150
4 Ga0065715_10105036 3300005293 Bacteria 2919
5 Ga0065715_10122470 3300005293 Bacteria 2204
6 Ga0065715_10134422 3300005293 Bacteria 1955
7 Ga0065715_10135258 3300005293 Bacteria 1941
8 Ga0065707_10085257 3300005295 Bacteria 6311
9 Ga0070683_100003405 3300005329 Bacteria 12898
10 Ga0070670_100012162 3300005331 Bacteria 7363
11 Ga0070670_100202012 3300005331 Unclassified 1727
12 Ga0070666_10023671 3300005335 Unclassified 3998
13 Ga0070680_100124861 3300005336 Bacteria 2150
14 Ga0070660_100047400 3300005339 Bacteria 3298
15 Ga0070691_10084498 3300005341 Unclassified 1558
16 Ga0070692_10319609 3300005345 Unclassified 954
17 Ga0070668_100106660 3300005347 Bacteria 2226
18 Ga0070668_100678604 3300005347 Bacteria 907
19 Ga0070669_100021711 3300005353 Bacteria 4589
20 Ga0070669_100308445 3300005353 Bacteria 1275
21 Ga0070669_100440613 3300005353 Bacteria 1072
22 Ga0070675_100064640 3300005354 Bacteria 3025
23 Ga0070675_100485125 3300005354 Unclassified 1112
24 Ga0070671_100062691 3300005355 Bacteria 3095
25 Ga0070671_100071947 3300005355 Bacteria 2887
26 Ga0070671_100517641 3300005355 Bacteria 1027
27 Ga0070674_100375249 3300005356 Bacteria 1155
28 Ga0070673_100069180 3300005364 Bacteria 2829
29 Ga0070673_100435575 3300005364 Unclassified 1177
30 Ga0070688_100150959 3300005365 Unclassified 1588
31 Ga0070688_100153912 3300005365 Unclassified 1574
32 Ga0070667_100393233 3300005367 Bacteria 1261
33 Ga0070703_10054145 3300005406 Bacteria 1292
34 Ga0070713_100030698 3300005436 Bacteria 4271
35 Ga0070700_100004801 3300005441 Bacteria 7092
36 Ga0070700_100096600 3300005441 Bacteria 1939
37 Ga0070700_100112866 3300005441 Bacteria 1810
38 Ga0070694_100113191 3300005444 Bacteria 1936
39 Ga0070694_100149910 3300005444 Bacteria 1702
40 Ga0070678_100091919 3300005456 Unclassified 2330
41 Ga0070681_10001877 3300005458 Bacteria 18970
42 Ga0070681_10044311 3300005458 Bacteria 4453
43 Ga0068867_100143909 3300005459 Bacteria 1866
44 Ga0068867_100472057 3300005459 Bacteria 1073
45 Ga0070706_100071219 3300005467 Bacteria 3215
46 Ga0070707_100324670 3300005468 Bacteria 1495
47 Ga0070707_100522441 3300005468 Bacteria 1149
48 Ga0070698_100104602 3300005471 Bacteria 2800
49 Ga0070699_100209765 3300005518 Bacteria 1733
50 Ga0070699_100459924 3300005518 Bacteria 1154
51 Ga0070679_100006935 3300005530 Bacteria 10568
52 Ga0070679_100068700 3300005530 Bacteria 3534
53 Ga0070684_100001650 3300005535 Bacteria 16184
54 Ga0070672_100336742 3300005543 Bacteria 1284
55 Ga0070672_100440571 3300005543 Unclassified 1121
56 Ga0070695_100059344 3300005545 Bacteria 2476
57 Ga0070695_100417456 3300005545 Bacteria 1021
58 Ga0070696_100313964 3300005546 Bacteria 1204
59 Ga0070665_100283714 3300005548 Bacteria 1658
60 Ga0070665_100364229 3300005548 Bacteria 1452
61 Ga0070704_100018254 3300005549 Bacteria 4481
62 Ga0070704_100059287 3300005549 Bacteria 2730
63 Ga0068855_100218295 3300005563 Bacteria 2140
64 Ga0070664_100126991 3300005564 Bacteria 2238
65 Ga0068852_100293534 3300005616 Bacteria 1571
66 Ga0068859_100001875 3300005617 Bacteria 21409
67 Ga0068859_100227140 3300005617 Bacteria 1955
68 Ga0068864_100047126 3300005618 Bacteria 3701
69 Ga0068864_100678409 3300005618 Unclassified 1005
70 Ga0068861_100042080 3300005719 Bacteria 3424
71 Ga0068861_100283030 3300005719 Bacteria 1429
72 Ga0068870_10226922 3300005840 Unclassified 1146
73 Ga0068858_100005426 3300005842 Bacteria 12493
74 Ga0068860_100516820 3300005843 Bacteria 1194
75 Ga0068862_100153994 3300005844 Bacteria 2048
76 Ga0068862_100159189 3300005844 Bacteria 2015
77 Ga0075367_10100071 3300006178 Bacteria 1771
78 Ga0068871_100480377 3300006358 Unclassified 1118
79 Ga0075428_100000023 3300006844 Bacteria 127355
80 Ga0075428_100004865 3300006844 Bacteria 14906
81 Ga0075428_100011874 3300006844 Bacteria 9686
82 Ga0075428_100021627 3300006844 Bacteria 7121
83 Ga0075428_100082843 3300006844 Bacteria 3500
84 Ga0075428_100178939 3300006844 Unclassified 2296
85 Ga0075428_100546042 3300006844 Bacteria 1239
86 Ga0075428_100780601 3300006844 Bacteria 1016
87 Ga0075430_100009038 3300006846 Bacteria 8423
88 Ga0075430_100027280 3300006846 Bacteria 4854
89 Ga0075430_100043246 3300006846 Bacteria 3807
90 Ga0075430_100457911 3300006846 Unclassified 1053
91 Ga0075430_100479749 3300006846 Bacteria 1026
92 Ga0075431_100005088 3300006847 Bacteria 12936
93 Ga0075431_100022886 3300006847 Bacteria 6388
94 Ga0075431_100046596 3300006847 Bacteria 4471
95 Ga0075431_100094475 3300006847 Unclassified 3086
96 Ga0075431_100127051 3300006847 Bacteria 2631
97 Ga0075431_100192202 3300006847 Bacteria 2091
98 Ga0075431_100298194 3300006847 Bacteria 1629
99 Ga0075433_10005419 3300006852 Bacteria 10024
100 Ga0075433_10007763 3300006852 Bacteria 8523
101 Ga0075433_10281852 3300006852 Bacteria 1472
102 Ga0075433_10494035 3300006852 Bacteria 1077
103 Ga0075434_100006859 3300006871 Bacteria 10488
104 Ga0075434_100289814 3300006871 Bacteria 1657
105 Ga0075429_100003459 3300006880 Bacteria 13484
106 Ga0075429_100014075 3300006880 Bacteria 6932
107 Ga0075429_100094926 3300006880 Bacteria 2601
108 Ga0075429_100163391 3300006880 Bacteria 1950
109 Ga0075436_100061314 3300006914 Unclassified 2598
110 Ga0075436_100242490 3300006914 Bacteria 1282
111 Ga0097620_100001875 3300006931 Bacteria 21409
112 Ga0097620_100227120 3300006931 Bacteria 1955
113 Ga0075435_100041227 3300007076 Bacteria 3690
114 Ga0075435_100071475 3300007076 Bacteria 2834
115 Ga0105240_10161913 3300009093 Bacteria 2657
116 Ga0111539_10000001 3300009094 Bacteria 1035431
117 Ga0111539_10001050 3300009094 Bacteria 36366
118 Ga0111539_10117444 3300009094 Bacteria 3118
119 Ga0111539_10134181 3300009094 Unclassified 2899
120 Ga0105247_10011179 3300009101 Bacteria 5412
121 Ga0114129_10004280 3300009147 Bacteria 20164
122 Ga0114129_10017547 3300009147 Bacteria 10190
123 Ga0114129_10022149 3300009147 Bacteria 9019
124 Ga0114129_10023920 3300009147 Bacteria 8657
125 Ga0114129_10037027 3300009147 Bacteria 6888
126 Ga0114129_10066943 3300009147 Bacteria 5009
127 Ga0114129_10118659 3300009147 Bacteria 3644
128 Ga0114129_10171829 3300009147 Bacteria 2954
129 Ga0114129_10176668 3300009147 Bacteria 2908
130 Ga0114129_10280994 3300009147 Bacteria 2224
131 Ga0114129_10332343 3300009147 Bacteria 2017
132 Ga0114129_10368730 3300009147 Bacteria 1898
133 Ga0114129_10411515 3300009147 Bacteria 1780
134 Ga0105248_10104200 3300009177 Unclassified 3198
135 Ga0105248_10114508 3300009177 Bacteria 3042
136 Ga0105248_10758684 3300009177 Unclassified 1095
137 Ga0105238_10234780 3300009551 Bacteria 1811
138 Ga0105249_10057701 3300009553 Bacteria 3557
139 Ga0105249_10215191 3300009553 Bacteria 1888
140 Ga0105249_10298204 3300009553 Bacteria 1616
141 Ga0105249_10371258 3300009553 Unclassified 1454
142 Ga0105249_10388824 3300009553 Bacteria 1422
143 Ga0105249_10680267 3300009553 Unclassified 1088
144 Ga0105239_10836445 3300010375 Bacteria 1055
145 Ga0157374_10077863 3300013296 Bacteria 3139
146 Ga0157374_10120661 3300013296 Bacteria 2530
147 Ga0157374_10435363 3300013296 Bacteria 1311
148 Ga0157378_10503531 3300013297 Bacteria 1210
149 Ga0163162_10466317 3300013306 Bacteria 1394
150 Ga0157372_10199702 3300013307 Bacteria 2316
151 Ga0157372_10250488 3300013307 Bacteria 2056
152 Ga0157375_10262354 3300013308 Unclassified 1889
153 Ga0163163_10020071 3300014325 Bacteria 6289
154 Ga0157380_10005677 3300014326 Bacteria 8727
155 Ga0157380_10008421 3300014326 Bacteria 7362
156 Ga0157380_10038564 3300014326 Bacteria 3711
157 Ga0157380_10042543 3300014326 Bacteria 3551
158 Ga0157380_10199217 3300014326 Bacteria 1775
159 Ga0157380_10208500 3300014326 Bacteria 1740
160 Ga0157379_10002554 3300014968 Bacteria 15272
161 Ga0157379_10264318 3300014968 Bacteria 1564
162 Ga0157376_10573453 3300014969 Unclassified 1120
163 Ga0206353_10314146 3300020082 Bacteria 1397
164 Ga0207697_10000685 3300025315 Bacteria 19294
165 Ga0207682_10033337 3300025893 Bacteria 2073
166 Ga0207688_10008481 3300025901 Bacteria 5592
167 Ga0207643_10075972 3300025908 Bacteria 1940
168 Ga0207684_10140310 3300025910 Bacteria 2077
169 Ga0207707_10019217 3300025912 Bacteria 5963
170 Ga0207660_10173578 3300025917 Bacteria 1670
171 Ga0207657_10056105 3300025919 Bacteria 3400
172 Ga0207652_10014997 3300025921 Bacteria 6287
173 Ga0207646_10114629 3300025922 Bacteria 2420
174 Ga0207646_10221061 3300025922 Bacteria 1711
175 Ga0207681_10042987 3300025923 Bacteria 3022
176 Ga0207681_10107470 3300025923 Bacteria 2024
177 Ga0207681_10424929 3300025923 Bacteria 1077
178 Ga0207694_10351295 3300025924 Bacteria 1220
179 Ga0207650_10027301 3300025925 Bacteria 4085
180 Ga0207650_10064186 3300025925 Bacteria 2748
181 Ga0207659_10030683 3300025926 Unclassified 3675
182 Ga0207687_10231012 3300025927 Bacteria 1461
183 Ga0207644_10045303 3300025931 Bacteria 3129
184 Ga0207644_10329077 3300025931 Bacteria 1237
185 Ga0207669_10011091 3300025937 Bacteria 4372
186 Ga0207669_10044657 3300025937 Bacteria 2605
187 Ga0207669_10071679 3300025937 Bacteria 2178
188 Ga0207669_10265393 3300025937 Bacteria 1286
189 Ga0207691_10182905 3300025940 Unclassified 1831
190 Ga0207691_10266041 3300025940 Bacteria 1477
191 Ga0207711_10093382 3300025941 Bacteria 2650
192 Ga0207711_10475152 3300025941 Bacteria 1164
193 Ga0207661_10004259 3300025944 Bacteria 10016
194 Ga0207661_10024177 3300025944 Bacteria 4601
195 Ga0207679_10367121 3300025945 Bacteria 1259
196 Ga0207667_10103630 3300025949 Bacteria 2934
197 Ga0207651_10047486 3300025960 Bacteria 2895
198 Ga0207651_10113677 3300025960 Bacteria 2038
199 Ga0207712_10048371 3300025961 Bacteria 2958
200 Ga0207668_10080043 3300025972 Bacteria 2366
201 Ga0207703_10153294 3300026035 Bacteria 2011
202 Ga0207678_10339202 3300026067 Unclassified 1295
203 Ga0207708_10005291 3300026075 Bacteria 9503
204 Ga0207708_10276271 3300026075 Bacteria 1360
205 Ga0207702_10454855 3300026078 Unclassified 1243
206 Ga0207674_10010280 3300026116 Bacteria 10619
207 Ga0207675_100031806 3300026118 Bacteria 4916
208 Ga0207675_100068773 3300026118 Bacteria 3309
209 Ga0207675_100263889 3300026118 Bacteria 1670
210 Ga0207683_10103608 3300026121 Bacteria 2542
211 Ga0207683_10105539 3300026121 Bacteria 2518
212 Ga0207683_10122653 3300026121 Bacteria 2334
213 Ga0207428_10000002 3300027907 Bacteria 854851
214 Ga0207428_10001901 3300027907 Bacteria 21151
215 Ga0207428_10063632 3300027907 Unclassified 2914
216 Ga0268266_10317582 3300028379 Bacteria 1457
217 Ga0268266_10632760 3300028379 Bacteria 1029
218 Ga0268266_10761273 3300028379 Unclassified 935
219 Ga0307408_100320570 3300031548 Bacteria 1305
220 Ga0307405_10126055 3300031731 Bacteria 1761
221 Ga0307413_10045374 3300031824 Bacteria 2605
222 Ga0307410_10133113 3300031852 Bacteria 1829
223 Ga0307407_10035313 3300031903 Bacteria 2746
224 Ga0307407_10105544 3300031903 Unclassified 1758
225 Ga0307409_100050304 3300031995 Bacteria 3182
226 Ga0307409_100176736 3300031995 Bacteria 1885
227 Ga0307409_100257291 3300031995 Bacteria 1600
228 Ga0307416_100303503 3300032002 Bacteria 1588
229 Ga0307416_100418125 3300032002 Unclassified 1384
230 Ga0307416_101262516 3300032002 Bacteria 844
231 Ga0307411_10088079 3300032005 Bacteria 2158
232 Ga0373937_0368729 3300036401 Bacteria 1361
233 Ga0451835_0407189 3300041492 Bacteria 1138
234 Ga0439450_017869 3300042008 Bacteria 1484
235 Ga0439446_0093269 3300042156 Bacteria 945
236 Ga0439435_0075298 3300042436 Bacteria 1005
237 Ga0439440_0016527 3300042993 Bacteria 1617
238 Ga0453684_0052385 3300044712 Bacteria 5337
239 Ga0453684_0304971 3300044712 Bacteria 1809
240 Ga0466967_0129756 3300045976 Bacteria 2339
241 Ga0495642_0138470 3300046528 Bacteria 1050
242 Ga0495635_0022630 3300046663 Bacteria 4380
243 Ga0495647_0166388 3300046681 Bacteria 953
244 Ga0496100_0187325 3300048903 Bacteria 1500
245 Ga0496104_0001913 3300048907 Bacteria 18049
246 Ga0496105_0013470 3300048908 Bacteria 6492
247 Ga0496106_0109576 3300048909 Bacteria 2149
248 Ga0496106_0241895 3300048909 Unclassified 1442
249 Ga0496108_0008679 3300048911 Bacteria 8240
250 Ga0496109_0225860 3300048912 Bacteria 1761
251 Ga0496110_0019153 3300048913 Bacteria 5754
252 Ga0496110_0256737 3300048913 Bacteria 1591
253 Ga0496111_0204114 3300048914 Bacteria 1469
254 Ga0496112_0015700 3300048915 Bacteria 7073
255 Ga0496112_0023111 3300048915 Bacteria 5935
256 Ga0496112_0306237 3300048915 Bacteria 1534
257 Ga0496114_0538486 3300048917 Bacteria 1032
258 Ga0501034_0125751 3300049571 Bacteria 2549
259 Ga0501036_0348787 3300049572 Bacteria 1236
260 Ga0501036_0586334 3300049572 Bacteria 925
261 Ga0501038_0033141 3300049574 Bacteria 4550
262 Ga0501038_0221838 3300049574 Bacteria 1508
263 Ga0501038_0230322 3300049574 Bacteria 1475
264 Ga0501038_0307529 3300049574 Bacteria 1243
265 Ga0501039_0033316 3300049575 Bacteria 3973
266 Ga0501040_0056029 3300049576 Bacteria 2704
267 Ga0501040_0170240 3300049576 Unclassified 1542
268 Ga0501040_0255217 3300049576 Bacteria 1251
269 Ga0501041_0356672 3300049577 Bacteria 924
270 Ga0501042_0198533 3300049578 Bacteria 1447
271 Ga0501042_0323296 3300049578 Bacteria 1115
272 Ga0501043_0039564 3300049579 Bacteria 3705
273 Ga0501046_0008320 3300049580 Bacteria 9049
274 Ga0501046_0111195 3300049580 Bacteria 2093
275 Ga0501047_0016224 3300049581 Bacteria 7106
276 Ga0501048_0425552 3300049582 Bacteria 950
277 Ga0501068_0010830 3300049584 Bacteria 5131
278 Ga0501070_0009702 3300049586 Bacteria 8140
279 Ga0501071_0061497 3300049587 Bacteria 2720
280 Ga0501071_0070450 3300049587 Unclassified 2547
281 Ga0501071_0091993 3300049587 Bacteria 2229
282 Ga0501072_0040706 3300049588 Bacteria 3649
283 Ga0501072_0086025 3300049588 Bacteria 2495
284 Ga0501072_0118219 3300049588 Bacteria 2112
285 Ga0501072_0186731 3300049588 Bacteria 1653
286 Ga0501073_0029740 3300049589 Bacteria 3904
287 Ga0501073_0100828 3300049589 Bacteria 2005
288 Ga0501073_0123494 3300049589 Bacteria 1794
289 Ga0501074_0162725 3300049590 Bacteria 1594
290 Ga0501074_0302816 3300049590 Unclassified 1135
291 Ga0501075_0014003 3300049591 Bacteria 5741
292 Ga0501075_0171386 3300049591 Bacteria 1656
293 Ga0501076_0032598 3300049592 Bacteria 4067
294 Ga0501076_0112050 3300049592 Bacteria 2206
295 Ga0501076_0129379 3300049592 Bacteria 2047
296 Ga0501079_0053314 3300049741 Bacteria 3120
297 Ga0501079_0068615 3300049741 Unclassified 2737
298 Ga0501079_0227756 3300049741 Bacteria 1456
299 Ga0501079_0608238 3300049741 Bacteria 860
300 Ga0501080_0600216 3300049742 Unclassified 977
301 Ga0501081_0060419 3300049743 Bacteria 2626
302 Ga0501081_0062887 3300049743 Bacteria 2575
303 Ga0501083_0005303 3300049744 Bacteria 9121
304 Ga0501035_0085587 3300049822 Bacteria 2778
305 Ga0501035_0106080 3300049822 Bacteria 2464
306 Ga0501035_0201993 3300049822 Bacteria 1704
307 Ga0501045_0013899 3300049824 Bacteria 5695
308 Ga0501045_0015535 3300049824 Bacteria 5401
309 Ga0501045_0077924 3300049824 Unclassified 2443
310 Ga0501045_0080393 3300049824 Bacteria 2403
311 nmdc:mga06z11_219951_c1 3300050494 Bacteria 1109
312 nmdc:mga06z11_82230_c1 3300050494 Bacteria 1730
313 nmdc:mga05p37_17452_c1 3300050507 Bacteria 8662
314 nmdc:mga05p37_217218_c1 3300050507 Bacteria 2309
315 nmdc:mga05p37_324493_c1 3300050507 Bacteria 1821
316 nmdc:mga05p37_40457_c1 3300050507 Bacteria 5725
317 nmdc:mga05p37_55618_c1 3300050507 Bacteria 4870
318 nmdc:mga05p37_575488_c1 3300050507 Bacteria 1276
319 nmdc:mga05p37_72020_c1 3300050507 Bacteria 4252
320 nmdc:mga05p37_77019_c1 3300050507 Bacteria 4105
321 nmdc:mga05p37_953_c1 3300050507 Bacteria 12723
322 nmdc:mga09592_157211_c1 3300050508 Bacteria 1962
323 nmdc:mga09592_19961_c1 3300050508 Bacteria 5504
324 nmdc:mga09592_414493_c1 3300050508 Bacteria 1164
325 nmdc:mga09592_55765_c1 3300050508 Bacteria 3339
326 nmdc:mga09592_570771_c1 3300050508 Bacteria 971
327 nmdc:mga09592_8511_c1 3300050508 Bacteria 8343
328 nmdc:mga09592_87043_c1 3300050508 Bacteria 2666
329 nmdc:mga0qj67_1927_c1 3300050509 Bacteria 14738
330 nmdc:mga0qj67_352889_c1 3300050509 Bacteria 1189
331 nmdc:mga0qj67_4747_c1 3300050509 Bacteria 3597
332 nmdc:mga06r32_106090_c1 3300050510 Bacteria 2760
333 nmdc:mga06r32_169870_c1 3300050510 Bacteria 2164
334 nmdc:mga06r32_18447_c1 3300050510 Bacteria 6387
335 nmdc:mga06r32_204858_c1 3300050510 Bacteria 1961
336 nmdc:mga06r32_341040_c1 3300050510 Unclassified 1483
337 nmdc:mga06r32_364834_c1 3300050510 Bacteria 1428
338 nmdc:mga06r32_5558_c1 3300050510 Bacteria 11357
339 nmdc:mga06r32_66428_c1 3300050510 Bacteria 3480
340 nmdc:mga08y16_147105_c1 3300050511 Bacteria 2449
341 nmdc:mga08y16_158883_c1 3300050511 Unclassified 2349
342 nmdc:mga08y16_209454_c1 3300050511 Bacteria 2019
343 nmdc:mga08y16_23276_c1 3300050511 Bacteria 6542
344 nmdc:mga08y16_319272_c1 3300050511 Unclassified 1599
345 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
346 nmdc:mga08y16_475486_c1 3300050511 Bacteria 1272
347 nmdc:mga08y16_921_c1 3300050511 Bacteria 28527
348 nmdc:mga0n895_291018_c1 3300050512 Bacteria 1656
349 nmdc:mga0n895_5004_c1 3300050512 Bacteria 10993
350 nmdc:mga0rr50_114333_c1 3300050513 Bacteria 2140
351 nmdc:mga08x19_207567_c1 3300050514 Bacteria 1344
352 nmdc:mga0a205_334335_c1 3300050515 Bacteria 1384
353 Ga0495601_0099354 3300053077 Bacteria 1879
354 Ga0500556_0052759 3300053104 Bacteria 1476
355 Ga0501084_0083177 3300054114 Bacteria 2686
356 Ga0501084_0227714 3300054114 Bacteria 1573
357 Ga0501084_0293225 3300054114 Bacteria 1374
358 Ga0501082_0019595 3300060353 Bacteria 5834
359 Ga0501082_0101595 3300060353 Bacteria 2488
360 Ga0501082_0220716 3300060353 Bacteria 1649
361 Ga0501082_0233118 3300060353 Bacteria 1602
362 Ga0501082_0258048 3300060353 Bacteria 1516
363 Ga0501082_0343585 3300060353 Bacteria 1301
364 Ga0530510_0294574 3300061734 Bacteria 1214

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049588 Ga0501072_0086025 Ga0501072_0086025_40_768 220
2 3300026075 Ga0207708_10276271 Ga0207708_102762712 223
3 3300049571 Ga0501034_0125751 Ga0501034_0125751_1647_2378 231
4 3300046681 Ga0495647_0166388 Ga0495647_0166388_11_721 232
5 3300044712 Ga0453684_0304971 Ga0453684_0304971_1003_1788 238
6 3300006844 Ga0075428_100021627 Ga0075428_1000216275 246
7 3300006846 Ga0075430_100027280 Ga0075430_1000272804 246
8 3300006880 Ga0075429_100003459 Ga0075429_1000034598 246
9 3300009147 Ga0114129_10171829 Ga0114129_101718292 246
10 3300031824 Ga0307413_10045374 Ga0307413_100453744 246
11 3300031903 Ga0307407_10035313 Ga0307407_100353133 246
12 3300031995 Ga0307409_100176736 Ga0307409_1001767362 246
13 3300032002 Ga0307416_100303503 Ga0307416_1003035032 246
14 3300032005 Ga0307411_10088079 Ga0307411_100880792 246
15 3300049576 Ga0501040_0255217 Ga0501040_0255217_356_1123 246
16 3300049588 Ga0501072_0118219 Ga0501072_0118219_560_1327 246
17 3300049590 Ga0501074_0162725 Ga0501074_0162725_194_961 246
18 3300049590 Ga0501074_0302816 Ga0501074_0302816_357_1124 246
19 3300049591 Ga0501075_0171386 Ga0501075_0171386_78_845 246
20 3300049741 Ga0501079_0227756 Ga0501079_0227756_529_1296 246
21 3300049742 Ga0501080_0600216 Ga0501080_0600216_189_956 246
22 3300049824 Ga0501045_0077924 Ga0501045_0077924_355_1122 246
23 3300050507 nmdc:mga05p37_77019_c1 nmdc:mga05p37_77019_c1_2931_3698 246
24 3300050508 nmdc:mga09592_8511_c1 nmdc:mga09592_8511_c1_4565_5332 246
25 3300054114 Ga0501084_0227714 Ga0501084_0227714_369_1136 246
26 3300060353 Ga0501082_0101595 Ga0501082_0101595_592_1359 246
27 3300049576 Ga0501040_0170240 Ga0501040_0170240_113_943 248
28 3300049587 Ga0501071_0070450 Ga0501071_0070450_1443_2273 248
29 3300049588 Ga0501072_0040706 Ga0501072_0040706_1496_2326 248
30 3300049592 Ga0501076_0112050 Ga0501076_0112050_947_1777 248
31 3300049741 Ga0501079_0053314 Ga0501079_0053314_86_916 248
32 3300049743 Ga0501081_0060419 Ga0501081_0060419_1723_2553 248
33 3300060353 Ga0501082_0233118 Ga0501082_0233118_193_1023 248
34 3300005336 Ga0070680_100124861 Ga0070680_1001248612 249
35 3300005341 Ga0070691_10084498 Ga0070691_100844982 249
36 3300005441 Ga0070700_100004801 Ga0070700_1000048013 249
37 3300005444 Ga0070694_100113191 Ga0070694_1001131913 249
38 3300005545 Ga0070695_100417456 Ga0070695_1004174561 249
39 3300005549 Ga0070704_100059287 Ga0070704_1000592874 249
40 3300006847 Ga0075431_100046596 Ga0075431_1000465964 249
41 3300006871 Ga0075434_100289814 Ga0075434_1002898141 249
42 3300006880 Ga0075429_100163391 Ga0075429_1001633912 249
43 3300009094 Ga0111539_10134181 Ga0111539_101341813 249
44 3300014326 Ga0157380_10008421 Ga0157380_100084216 249
45 3300014326 Ga0157380_10042543 Ga0157380_100425432 249
46 3300025908 Ga0207643_10075972 Ga0207643_100759723 249
47 3300025917 Ga0207660_10173578 Ga0207660_101735783 249
48 3300025940 Ga0207691_10266041 Ga0207691_102660413 249
49 3300026075 Ga0207708_10005291 Ga0207708_1000529111 249
50 3300027907 Ga0207428_10063632 Ga0207428_100636323 249
51 3300031731 Ga0307405_10126055 Ga0307405_101260553 249
52 3300031852 Ga0307410_10133113 Ga0307410_101331133 249
53 3300031903 Ga0307407_10105544 Ga0307407_101055443 249
54 3300031995 Ga0307409_100050304 Ga0307409_1000503045 249
55 3300032002 Ga0307416_101262516 Ga0307416_1012625161 249
56 3300049589 Ga0501073_0029740 Ga0501073_0029740_2582_3355 249
57 3300050494 nmdc:mga06z11_219951_c1 nmdc:mga06z11_219951_c1_134_907 249
58 3300050507 nmdc:mga05p37_575488_c1 nmdc:mga05p37_575488_c1_123_896 249
59 3300050508 nmdc:mga09592_570771_c1 nmdc:mga09592_570771_c1_134_937 249
60 3300050510 nmdc:mga06r32_66428_c1 nmdc:mga06r32_66428_c1_1544_2350 249
61 3300050511 nmdc:mga08y16_158883_c1 nmdc:mga08y16_158883_c1_1435_2208 249
62 3300050511 nmdc:mga08y16_23276_c1 nmdc:mga08y16_23276_c1_246_1019 249
63 3300050511 nmdc:mga08y16_475486_c1 nmdc:mga08y16_475486_c1_56_829 249
64 3300050512 nmdc:mga0n895_291018_c1 nmdc:mga0n895_291018_c1_153_926 249
65 3300013296 Ga0157374_10120661 Ga0157374_101206612 250
66 3300013308 Ga0157375_10262354 Ga0157375_102623543 250
67 3300032002 Ga0307416_100418125 Ga0307416_1004181252 250
68 3300005353 Ga0070669_100440613 Ga0070669_1004406131 251
69 3300005459 Ga0068867_100472057 Ga0068867_1004720571 251
70 3300005518 Ga0070699_100459924 Ga0070699_1004599242 251
71 3300025923 Ga0207681_10424929 Ga0207681_104249291 251
72 3300026118 Ga0207675_100263889 Ga0207675_1002638892 251
73 3300031995 Ga0307409_100257291 Ga0307409_1002572912 251
74 3300042008 Ga0439450_017869 Ga0439450_017869_460_1260 251
75 3300042993 Ga0439440_0016527 Ga0439440_0016527_708_1508 251
76 3300005293 Ga0065715_10092382 Ga0065715_100923822 252
77 3300005293 Ga0065715_10134422 Ga0065715_101344222 252
78 3300005293 Ga0065715_10135258 Ga0065715_101352581 252
79 3300005329 Ga0070683_100003405 Ga0070683_1000034055 252
80 3300005331 Ga0070670_100012162 Ga0070670_1000121622 252
81 3300005347 Ga0070668_100106660 Ga0070668_1001066602 252
82 3300005347 Ga0070668_100678604 Ga0070668_1006786041 252
83 3300005354 Ga0070675_100064640 Ga0070675_1000646403 252
84 3300005354 Ga0070675_100485125 Ga0070675_1004851251 252
85 3300005355 Ga0070671_100062691 Ga0070671_1000626912 252
86 3300005356 Ga0070674_100375249 Ga0070674_1003752492 252
87 3300005365 Ga0070688_100150959 Ga0070688_1001509591 252
88 3300005441 Ga0070700_100096600 Ga0070700_1000966001 252
89 3300005456 Ga0070678_100091919 Ga0070678_1000919192 252
90 3300005535 Ga0070684_100001650 Ga0070684_1000016503 252
91 3300005546 Ga0070696_100313964 Ga0070696_1003139642 252
92 3300005618 Ga0068864_100047126 Ga0068864_1000471262 252
93 3300005719 Ga0068861_100042080 Ga0068861_1000420801 252
94 3300005844 Ga0068862_100159189 Ga0068862_1001591892 252
95 3300006844 Ga0075428_100004865 Ga0075428_10000486515 252
96 3300006847 Ga0075431_100298194 Ga0075431_1002981942 252
97 3300006852 Ga0075433_10007763 Ga0075433_1000776310 252
98 3300006852 Ga0075433_10281852 Ga0075433_102818521 252
99 3300006871 Ga0075434_100006859 Ga0075434_1000068594 252
100 3300006914 Ga0075436_100242490 Ga0075436_1002424902 252
101 3300007076 Ga0075435_100041227 Ga0075435_1000412273 252
102 3300009147 Ga0114129_10022149 Ga0114129_100221496 252
103 3300009177 Ga0105248_10114508 Ga0105248_101145082 252
104 3300009553 Ga0105249_10298204 Ga0105249_102982042 252
105 3300013296 Ga0157374_10077863 Ga0157374_100778632 252
106 3300013297 Ga0157378_10503531 Ga0157378_105035312 252
107 3300014326 Ga0157380_10038564 Ga0157380_100385642 252
108 3300014968 Ga0157379_10264318 Ga0157379_102643182 252
109 3300025925 Ga0207650_10064186 Ga0207650_100641862 252
110 3300025931 Ga0207644_10045303 Ga0207644_100453032 252
111 3300025937 Ga0207669_10265393 Ga0207669_102653931 252
112 3300025941 Ga0207711_10093382 Ga0207711_100933822 252
113 3300025944 Ga0207661_10004259 Ga0207661_100042592 252
114 3300026116 Ga0207674_10010280 Ga0207674_100102801 252
115 3300026118 Ga0207675_100068773 Ga0207675_1000687733 252
116 3300026121 Ga0207683_10103608 Ga0207683_101036083 252
117 3300042156 Ga0439446_0093269 Ga0439446_0093269_28_831 252
118 3300048907 Ga0496104_0001913 Ga0496104_0001913_14700_15488 252
119 3300048908 Ga0496105_0013470 Ga0496105_0013470_3724_4512 252
120 3300048909 Ga0496106_0241895 Ga0496106_0241895_524_1312 252
121 3300048911 Ga0496108_0008679 Ga0496108_0008679_1869_2657 252
122 3300048913 Ga0496110_0019153 Ga0496110_0019153_4668_5456 252
123 3300048915 Ga0496112_0015700 Ga0496112_0015700_3951_4739 252
124 3300050507 nmdc:mga05p37_17452_c1 nmdc:mga05p37_17452_c1_5100_5888 252
125 3300050510 nmdc:mga06r32_364834_c1 nmdc:mga06r32_364834_c1_523_1311 252
126 3300050511 nmdc:mga08y16_209454_c1 nmdc:mga08y16_209454_c1_107_895 252
127 3300050512 nmdc:mga0n895_5004_c1 nmdc:mga0n895_5004_c1_744_1532 252
128 3300050513 nmdc:mga0rr50_114333_c1 nmdc:mga0rr50_114333_c1_75_866 252
129 3300050514 nmdc:mga08x19_207567_c1 nmdc:mga08x19_207567_c1_434_1222 252
130 3300031548 Ga0307408_100320570 Ga0307408_1003205702 253
131 3300049574 Ga0501038_0307529 Ga0501038_0307529_91_882 253
132 3300049575 Ga0501039_0033316 Ga0501039_0033316_1268_2059 253
133 3300049578 Ga0501042_0198533 Ga0501042_0198533_219_1010 253
134 3300049824 Ga0501045_0080393 Ga0501045_0080393_228_1019 253
135 3300006844 Ga0075428_100082843 Ga0075428_1000828434 254
136 3300006846 Ga0075430_100009038 Ga0075430_1000090382 254
137 3300006846 Ga0075430_100043246 Ga0075430_1000432462 254
138 3300006846 Ga0075430_100457911 Ga0075430_1004579112 254
139 3300006847 Ga0075431_100005088 Ga0075431_10000508812 254
140 3300006847 Ga0075431_100022886 Ga0075431_1000228863 254
141 3300006847 Ga0075431_100094475 Ga0075431_1000944752 254
142 3300006880 Ga0075429_100014075 Ga0075429_1000140754 254
143 3300009094 Ga0111539_10001050 Ga0111539_1000105021 254
144 3300009147 Ga0114129_10176668 Ga0114129_101766682 254
145 3300009147 Ga0114129_10411515 Ga0114129_104115152 254
146 3300027907 Ga0207428_10001901 Ga0207428_1000190113 254
147 3300050507 nmdc:mga05p37_40457_c1 nmdc:mga05p37_40457_c1_1614_2426 254
148 3300050508 nmdc:mga09592_157211_c1 nmdc:mga09592_157211_c1_831_1625 254
149 3300050508 nmdc:mga09592_19961_c1 nmdc:mga09592_19961_c1_44_856 254
150 3300050509 nmdc:mga0qj67_1927_c1 nmdc:mga0qj67_1927_c1_12994_13806 254
151 3300050509 nmdc:mga0qj67_352889_c1 nmdc:mga0qj67_352889_c1_265_1083 254
152 3300050510 nmdc:mga06r32_106090_c1 nmdc:mga06r32_106090_c1_966_1784 254
153 3300050510 nmdc:mga06r32_18447_c1 nmdc:mga06r32_18447_c1_806_1600 254
154 3300050510 nmdc:mga06r32_204858_c1 nmdc:mga06r32_204858_c1_851_1633 254
155 3300050510 nmdc:mga06r32_5558_c1 nmdc:mga06r32_5558_c1_10101_10913 254
156 3300050511 nmdc:mga08y16_921_c1 nmdc:mga08y16_921_c1_16090_16872 254
157 3300005293 Ga0065715_10002950 Ga0065715_100029503 255
158 3300005293 Ga0065715_10105036 Ga0065715_101050362 255
159 3300005293 Ga0065715_10122470 Ga0065715_101224702 255
160 3300005295 Ga0065707_10085257 Ga0065707_100852573 255
161 3300005331 Ga0070670_100202012 Ga0070670_1002020122 255
162 3300005345 Ga0070692_10319609 Ga0070692_103196091 255
163 3300005353 Ga0070669_100021711 Ga0070669_1000217114 255
164 3300005353 Ga0070669_100308445 Ga0070669_1003084452 255
165 3300005355 Ga0070671_100517641 Ga0070671_1005176412 255
166 3300005364 Ga0070673_100435575 Ga0070673_1004355751 255
167 3300005365 Ga0070688_100153912 Ga0070688_1001539122 255
168 3300005406 Ga0070703_10054145 Ga0070703_100541452 255
169 3300005436 Ga0070713_100030698 Ga0070713_1000306985 255
170 3300005444 Ga0070694_100149910 Ga0070694_1001499102 255
171 3300005458 Ga0070681_10044311 Ga0070681_100443112 255
172 3300005467 Ga0070706_100071219 Ga0070706_1000712194 255
173 3300005468 Ga0070707_100324670 Ga0070707_1003246702 255
174 3300005468 Ga0070707_100522441 Ga0070707_1005224412 255
175 3300005471 Ga0070698_100104602 Ga0070698_1001046022 255
176 3300005518 Ga0070699_100209765 Ga0070699_1002097652 255
177 3300005530 Ga0070679_100068700 Ga0070679_1000687004 255
178 3300005543 Ga0070672_100440571 Ga0070672_1004405711 255
179 3300005545 Ga0070695_100059344 Ga0070695_1000593442 255
180 3300005548 Ga0070665_100283714 Ga0070665_1002837141 255
181 3300005549 Ga0070704_100018254 Ga0070704_1000182542 255
182 3300005563 Ga0068855_100218295 Ga0068855_1002182953 255
183 3300005616 Ga0068852_100293534 Ga0068852_1002935341 255
184 3300005617 Ga0068859_100001875 Ga0068859_10000187510 255
185 3300005719 Ga0068861_100283030 Ga0068861_1002830302 255
186 3300005840 Ga0068870_10226922 Ga0068870_102269222 255
187 3300005843 Ga0068860_100516820 Ga0068860_1005168202 255
188 3300005844 Ga0068862_100153994 Ga0068862_1001539942 255
189 3300006178 Ga0075367_10100071 Ga0075367_101000712 255
190 3300006844 Ga0075428_100000023 Ga0075428_10000002386 255
191 3300006844 Ga0075428_100011874 Ga0075428_1000118742 255
192 3300006844 Ga0075428_100178939 Ga0075428_1001789393 255
193 3300006844 Ga0075428_100546042 Ga0075428_1005460421 255
194 3300006846 Ga0075430_100479749 Ga0075430_1004797491 255
195 3300006847 Ga0075431_100192202 Ga0075431_1001922022 255
196 3300006880 Ga0075429_100094926 Ga0075429_1000949262 255
197 3300006931 Ga0097620_100001875 Ga0097620_10000187510 255
198 3300007076 Ga0075435_100071475 Ga0075435_1000714754 255
199 3300009093 Ga0105240_10161913 Ga0105240_101619133 255
200 3300009094 Ga0111539_10000001 Ga0111539_10000001654 255
201 3300009094 Ga0111539_10117444 Ga0111539_101174442 255
202 3300009147 Ga0114129_10004280 Ga0114129_100042807 255
203 3300009147 Ga0114129_10037027 Ga0114129_100370275 255
204 3300009147 Ga0114129_10066943 Ga0114129_100669436 255
205 3300009147 Ga0114129_10118659 Ga0114129_101186592 255
206 3300009147 Ga0114129_10280994 Ga0114129_102809942 255
207 3300009147 Ga0114129_10368730 Ga0114129_103687302 255
208 3300009177 Ga0105248_10104200 Ga0105248_101042003 255
209 3300009551 Ga0105238_10234780 Ga0105238_102347802 255
210 3300009553 Ga0105249_10057701 Ga0105249_100577012 255
211 3300009553 Ga0105249_10371258 Ga0105249_103712582 255
212 3300009553 Ga0105249_10388824 Ga0105249_103888242 255
213 3300010375 Ga0105239_10836445 Ga0105239_108364451 255
214 3300013296 Ga0157374_10435363 Ga0157374_104353632 255
215 3300013307 Ga0157372_10199702 Ga0157372_101997022 255
216 3300013307 Ga0157372_10250488 Ga0157372_102504881 255
217 3300014325 Ga0163163_10020071 Ga0163163_100200713 255
218 3300014326 Ga0157380_10005677 Ga0157380_100056775 255
219 3300014326 Ga0157380_10199217 Ga0157380_101992172 255
220 3300020082 Ga0206353_10314146 Ga0206353_103141462 255
221 3300025315 Ga0207697_10000685 Ga0207697_1000068510 255
222 3300025901 Ga0207688_10008481 Ga0207688_100084813 255
223 3300025910 Ga0207684_10140310 Ga0207684_101403101 255
224 3300025922 Ga0207646_10114629 Ga0207646_101146293 255
225 3300025922 Ga0207646_10221061 Ga0207646_102210611 255
226 3300025923 Ga0207681_10107470 Ga0207681_101074701 255
227 3300025924 Ga0207694_10351295 Ga0207694_103512952 255
228 3300025925 Ga0207650_10027301 Ga0207650_100273013 255
229 3300025931 Ga0207644_10329077 Ga0207644_103290772 255
230 3300025937 Ga0207669_10011091 Ga0207669_100110913 255
231 3300025937 Ga0207669_10044657 Ga0207669_100446572 255
232 3300025937 Ga0207669_10071679 Ga0207669_100716793 255
233 3300025941 Ga0207711_10475152 Ga0207711_104751521 255
234 3300025944 Ga0207661_10024177 Ga0207661_100241773 255
235 3300025949 Ga0207667_10103630 Ga0207667_101036303 255
236 3300025960 Ga0207651_10113677 Ga0207651_101136772 255
237 3300025961 Ga0207712_10048371 Ga0207712_100483712 255
238 3300025972 Ga0207668_10080043 Ga0207668_100800432 255
239 3300026067 Ga0207678_10339202 Ga0207678_103392022 255
240 3300026078 Ga0207702_10454855 Ga0207702_104548552 255
241 3300026118 Ga0207675_100031806 Ga0207675_1000318063 255
242 3300026121 Ga0207683_10105539 Ga0207683_101055392 255
243 3300026121 Ga0207683_10122653 Ga0207683_101226533 255
244 3300027907 Ga0207428_10000002 Ga0207428_10000002667 255
245 3300028379 Ga0268266_10632760 Ga0268266_106327601 255
246 3300041492 Ga0451835_0407189 Ga0451835_0407189_247_1050 255
247 3300042436 Ga0439435_0075298 Ga0439435_0075298_87_869 255
248 3300044712 Ga0453684_0052385 Ga0453684_0052385_3157_3969 255
249 3300045976 Ga0466967_0129756 Ga0466967_0129756_236_1024 255
250 3300046528 Ga0495642_0138470 Ga0495642_0138470_129_911 255
251 3300048903 Ga0496100_0187325 Ga0496100_0187325_534_1328 255
252 3300048909 Ga0496106_0109576 Ga0496106_0109576_1293_2087 255
253 3300048912 Ga0496109_0225860 Ga0496109_0225860_178_966 255
254 3300048913 Ga0496110_0256737 Ga0496110_0256737_242_1036 255
255 3300048915 Ga0496112_0023111 Ga0496112_0023111_3777_4571 255
256 3300048915 Ga0496112_0306237 Ga0496112_0306237_657_1445 255
257 3300048917 Ga0496114_0538486 Ga0496114_0538486_19_807 255
258 3300049572 Ga0501036_0348787 Ga0501036_0348787_181_975 255
259 3300049572 Ga0501036_0586334 Ga0501036_0586334_116_910 255
260 3300049574 Ga0501038_0033141 Ga0501038_0033141_2931_3755 255
261 3300049574 Ga0501038_0221838 Ga0501038_0221838_355_1143 255
262 3300049574 Ga0501038_0230322 Ga0501038_0230322_403_1197 255
263 3300049576 Ga0501040_0056029 Ga0501040_0056029_1202_1996 255
264 3300049577 Ga0501041_0356672 Ga0501041_0356672_73_867 255
265 3300049578 Ga0501042_0323296 Ga0501042_0323296_25_819 255
266 3300049579 Ga0501043_0039564 Ga0501043_0039564_2409_3233 255
267 3300049580 Ga0501046_0008320 Ga0501046_0008320_4326_5150 255
268 3300049580 Ga0501046_0111195 Ga0501046_0111195_656_1450 255
269 3300049581 Ga0501047_0016224 Ga0501047_0016224_3173_3997 255
270 3300049582 Ga0501048_0425552 Ga0501048_0425552_129_935 255
271 3300049584 Ga0501068_0010830 Ga0501068_0010830_968_1792 255
272 3300049586 Ga0501070_0009702 Ga0501070_0009702_2671_3495 255
273 3300049587 Ga0501071_0061497 Ga0501071_0061497_260_1084 255
274 3300049587 Ga0501071_0091993 Ga0501071_0091993_805_1599 255
275 3300049588 Ga0501072_0186731 Ga0501072_0186731_179_973 255
276 3300049589 Ga0501073_0100828 Ga0501073_0100828_36_839 255
277 3300049589 Ga0501073_0123494 Ga0501073_0123494_20_844 255
278 3300049591 Ga0501075_0014003 Ga0501075_0014003_1503_2297 255
279 3300049592 Ga0501076_0032598 Ga0501076_0032598_2936_3724 255
280 3300049592 Ga0501076_0129379 Ga0501076_0129379_296_1090 255
281 3300049741 Ga0501079_0068615 Ga0501079_0068615_1562_2350 255
282 3300049741 Ga0501079_0608238 Ga0501079_0608238_32_835 255
283 3300049743 Ga0501081_0062887 Ga0501081_0062887_1712_2500 255
284 3300049744 Ga0501083_0005303 Ga0501083_0005303_3781_4605 255
285 3300049822 Ga0501035_0085587 Ga0501035_0085587_498_1322 255
286 3300049822 Ga0501035_0106080 Ga0501035_0106080_312_1106 255
287 3300049822 Ga0501035_0201993 Ga0501035_0201993_14_802 255
288 3300049824 Ga0501045_0013899 Ga0501045_0013899_4105_4929 255
289 3300049824 Ga0501045_0015535 Ga0501045_0015535_28_822 255
290 3300050494 nmdc:mga06z11_82230_c1 nmdc:mga06z11_82230_c1_18_812 255
291 3300050507 nmdc:mga05p37_324493_c1 nmdc:mga05p37_324493_c1_691_1467 255
292 3300050507 nmdc:mga05p37_55618_c1 nmdc:mga05p37_55618_c1_211_1023 255
293 3300050507 nmdc:mga05p37_953_c1 nmdc:mga05p37_953_c1_10146_10940 255
294 3300050508 nmdc:mga09592_55765_c1 nmdc:mga09592_55765_c1_494_1282 255
295 3300050508 nmdc:mga09592_87043_c1 nmdc:mga09592_87043_c1_990_1790 255
296 3300050509 nmdc:mga0qj67_4747_c1 nmdc:mga0qj67_4747_c1_1510_2316 255
297 3300050510 nmdc:mga06r32_169870_c1 nmdc:mga06r32_169870_c1_266_1054 255
298 3300050510 nmdc:mga06r32_341040_c1 nmdc:mga06r32_341040_c1_488_1264 255
299 3300050511 nmdc:mga08y16_319272_c1 nmdc:mga08y16_319272_c1_366_1214 255
300 3300050511 nmdc:mga08y16_3_c1 nmdc:mga08y16_3_c1_734159_734947 255
301 3300053104 Ga0500556_0052759 Ga0500556_0052759_467_1258 255
302 3300054114 Ga0501084_0083177 Ga0501084_0083177_578_1402 255
303 3300054114 Ga0501084_0293225 Ga0501084_0293225_172_960 255
304 3300060353 Ga0501082_0019595 Ga0501082_0019595_1154_1978 255
305 3300060353 Ga0501082_0220716 Ga0501082_0220716_494_1282 255
306 3300060353 Ga0501082_0258048 Ga0501082_0258048_572_1366 255
307 3300061734 Ga0530510_0294574 Ga0530510_0294574_33_836 255
308 3300006844 Ga0075428_100780601 Ga0075428_1007806011 257
309 3300006852 Ga0075433_10494035 Ga0075433_104940351 257
310 3300009147 Ga0114129_10332343 Ga0114129_103323432 257
311 3300050511 nmdc:mga08y16_147105_c1 nmdc:mga08y16_147105_c1_1376_2161 257
312 3300050515 nmdc:mga0a205_334335_c1 nmdc:mga0a205_334335_c1_450_1235 257
313 3300005335 Ga0070666_10023671 Ga0070666_100236713 258
314 3300005617 Ga0068859_100227140 Ga0068859_1002271401 258
315 3300005842 Ga0068858_100005426 Ga0068858_1000054268 258
316 3300006847 Ga0075431_100127051 Ga0075431_1001270512 258
317 3300006852 Ga0075433_10005419 Ga0075433_100054198 258
318 3300006931 Ga0097620_100227120 Ga0097620_1002271201 258
319 3300009101 Ga0105247_10011179 Ga0105247_100111794 258
320 3300009147 Ga0114129_10017547 Ga0114129_100175476 258
321 3300009147 Ga0114129_10023920 Ga0114129_1002392010 258
322 3300009553 Ga0105249_10215191 Ga0105249_102151911 258
323 3300014968 Ga0157379_10002554 Ga0157379_1000255413 258
324 3300026035 Ga0207703_10153294 Ga0207703_101532942 258
325 3300036401 Ga0373937_0368729 Ga0373937_0368729_66_854 258
326 3300046663 Ga0495635_0022630 Ga0495635_0022630_1280_2068 258
327 3300050507 nmdc:mga05p37_217218_c1 nmdc:mga05p37_217218_c1_79_936 258
328 3300050507 nmdc:mga05p37_72020_c1 nmdc:mga05p37_72020_c1_942_1730 258
329 3300050508 nmdc:mga09592_414493_c1 nmdc:mga09592_414493_c1_120_977 258
330 3300053077 Ga0495601_0099354 Ga0495601_0099354_593_1381 258
331 3300005290 Ga0065712_10076994 Ga0065712_100769943 259
332 3300005339 Ga0070660_100047400 Ga0070660_1000474002 259
333 3300005355 Ga0070671_100071947 Ga0070671_1000719472 259
334 3300005364 Ga0070673_100069180 Ga0070673_1000691802 259
335 3300005367 Ga0070667_100393233 Ga0070667_1003932331 259
336 3300005441 Ga0070700_100112866 Ga0070700_1001128662 259
337 3300005458 Ga0070681_10001877 Ga0070681_100018775 259
338 3300005459 Ga0068867_100143909 Ga0068867_1001439092 259
339 3300005530 Ga0070679_100006935 Ga0070679_1000069353 259
340 3300005543 Ga0070672_100336742 Ga0070672_1003367421 259
341 3300005548 Ga0070665_100364229 Ga0070665_1003642292 259
342 3300005564 Ga0070664_100126991 Ga0070664_1001269912 259
343 3300005618 Ga0068864_100678409 Ga0068864_1006784091 259
344 3300006358 Ga0068871_100480377 Ga0068871_1004803772 259
345 3300006914 Ga0075436_100061314 Ga0075436_1000613142 259
346 3300009177 Ga0105248_10758684 Ga0105248_107586842 259
347 3300009553 Ga0105249_10680267 Ga0105249_106802671 259
348 3300013306 Ga0163162_10466317 Ga0163162_104663171 259
349 3300014326 Ga0157380_10208500 Ga0157380_102085001 259
350 3300014969 Ga0157376_10573453 Ga0157376_105734531 259
351 3300025893 Ga0207682_10033337 Ga0207682_100333372 259
352 3300025912 Ga0207707_10019217 Ga0207707_100192175 259
353 3300025919 Ga0207657_10056105 Ga0207657_100561052 259
354 3300025921 Ga0207652_10014997 Ga0207652_100149972 259
355 3300025923 Ga0207681_10042987 Ga0207681_100429872 259
356 3300025926 Ga0207659_10030683 Ga0207659_100306832 259
357 3300025927 Ga0207687_10231012 Ga0207687_102310122 259
358 3300025940 Ga0207691_10182905 Ga0207691_101829052 259
359 3300025945 Ga0207679_10367121 Ga0207679_103671212 259
360 3300025960 Ga0207651_10047486 Ga0207651_100474864 259
361 3300028379 Ga0268266_10317582 Ga0268266_103175822 259
362 3300028379 Ga0268266_10761273 Ga0268266_107612731 259
363 3300048914 Ga0496111_0204114 Ga0496111_0204114_12_791 259
364 3300060353 Ga0501082_0343585 Ga0501082_0343585_95_880 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01416

PseudoU_synth_1

tRNA pseudouridine synthase

6

105

0.94

PF01416

PseudoU_synth_1

tRNA pseudouridine synthase

142

254

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nr0-assembly1.cif.gz_B crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.9382 2 246
8q70-assembly1.cif.gz_A-2 trna pseudouridine synthase a homodimer 0.9143 3 246
1vs3-assembly1.cif.gz_B crystal structure of the trna pseudouridine synthase trua from thermus thermophilus hb8 0.8953 1 247
2nre-assembly1.cif.gz_A-2 crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.8943 2 259
2nr0-assembly1.cif.gz_B crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.8859 2 246
ID Description Score Start End Superfamily
2nqpB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9644 2 106 3.30.70.580
af_C7J2E5_59_129_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9587 3 65 3.30.70.580
af_Q2FW37_1_104_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9568 3 105 3.30.70.580
af_A0A0R0F7R0_40_148_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9491 1 106 3.30.70.580
af_O74451_30_149_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.939 2 102 3.30.70.580
ID Description Score Start End GO Terms
AF-A0A2V7Z9L7-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9976 5 129 GO:0003723
GO:0031119
GO:0160147
AF-A0A3N6AX78-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9882 2 105 GO:0003723
GO:0031119
GO:0160147
AF-A0A533YIS0-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9859 1 106 GO:0003723
GO:0031119
GO:0160147
AF-X1RMX3-F1-model_v4 Pseudouridine synthase I TruA alpha/beta domain-containing protein 0.9849 2 106 GO:0003723
GO:0009982
GO:0031119
AF-A0A2V8TCU5-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9842 1 118 GO:0003723
GO:0031119
GO:0160147

Feature Viewer

pLDDT pTM Quality
93.59 0.9 High
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Predicted Structure (AlphaFold2)

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