F424082

General Info

Members Datasets Scaffolds Average Seq Length
366 275 732 427

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0000110|Ga0395905_0000110_107032_108417
Length 461
Sequence MHTPEHHSVIIVGGGQAGLSLSHYLQQGGIDHLVLEKHTPMHAWRTQRWDAFCLVTPNWQCKLPGHAYSGDDPHGFMKKDEILAYLEGFLRKVDPPILTGVTVQQVKAMPEGGYAVSTSAGDQTSRQTYTADHVVVASGGYHQPIIPRLAERLPARIVQLHSEQYRNAASLPEGDVLVVGSGQSGAQIAEDLHLAGKRVHLAVGDAPRCARFYRGRDVVDWLADLGYYDMPVDAHPLREGVRDNTNHYVTGRDGGRDIDLRAFARQGMKLYGLLDGLDGVTLRFKDTLRASLDHADKVYNGINATIDKHIAHKHIDAPPASVYEPLWQPDAQGDAHTALDLDQAGITAIIWCIGFQPDFKWVDAPVFNGRGHPAHQRGVTPQAGLYFLGLPWLYTWGSGRFSGVARDAQHIANHIGAHQGRACPSIQAARISRPQSTDATAGFSETSPDATPSCDSRATMP

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
12 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
13 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
14 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
17 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300012502 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610 Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
45 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
46 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
50 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
84 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
85 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
86 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
87 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
88 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
93 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
94 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
97 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
98 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
99 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
100 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
101 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
102 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
103 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
104 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
105 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
106 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
107 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
108 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
109 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
114 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
115 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
116 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
119 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
120 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
121 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
127 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
128 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
142 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
143 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
144 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
145 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
146 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
147 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
148 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
149 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
150 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
151 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
152 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
153 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
156 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
157 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
158 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
159 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
160 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
161 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
162 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
163 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
164 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
165 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
166 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
167 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
168 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
169 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
170 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
171 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
172 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
173 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
174 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
175 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
176 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
177 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
178 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
179 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
180 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
181 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
182 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
183 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
184 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
185 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
186 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
187 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
188 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
189 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
190 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
191 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
192 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
193 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
194 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
195 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
196 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
197 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
198 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
199 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
200 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
201 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
202 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
203 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
204 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
205 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
206 2791355266 Rhizobium sp. L43 Isolate Nodule
207 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
208 2802429633 Rhizobium anhuiense J3 Isolate Nodule
209 2802429634 Rhizobium anhuiense S10 Isolate Nodule
210 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
211 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
212 2802429637 Rhizobium anhuiense C15 Isolate Nodule
213 2818991446 Variovorax sp. 1180 Isolate Unclassified
214 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
215 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
216 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
217 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
218 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
219 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
220 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
221 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
222 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
223 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
224 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
225 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
226 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
227 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
228 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
229 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
230 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
231 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
232 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
233 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
234 2842694124 Methylopila sp. R-72369 Isolate Unclassified
235 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
236 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
237 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
238 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
239 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
240 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
241 2899924645 Variovorax sp. 369 Isolate Unclassified
242 2902330777 Methylobacterium sp. 2A Isolate Unclassified
243 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
244 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
245 2904456579 Variovorax sp. 2002 Isolate Unclassified
246 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
247 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
248 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
249 2928051484 Variovorax sp. 1133 Isolate Unclassified
250 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
251 2928070936 Variovorax gossypii 1167 Isolate Unclassified
252 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
253 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
254 2929520902 Variovorax beijingensis 502 Isolate Unclassified
255 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
256 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
257 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
258 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
259 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
260 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
261 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
262 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
263 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
264 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
265 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
266 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
267 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
268 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
269 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
270 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
271 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
272 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
273 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
274 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
275 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 66.39
Metatranscriptomes 0.55
Isolates 33.06

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 35.25
Nodule 14.75
Rhizoplane 1.91
Rhizosphere 30.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0000110 3300037471 Bacteria 137078
2 JGI24739J22299_10009435 3300001989 Bacteria 3636
3 JGI25152J39213_1001086 3300002773 Bacteria 12781
4 JGI25152J39213_1002145 3300002773 Bacteria 7741
5 JGI25152J39213_1005373 3300002773 Bacteria 3755
6 JGI25150J39212_1001145 3300002774 Bacteria 7956
7 JGI25159J45721_1006254 3300002987 Bacteria 3593
8 JGI25151J46595_10000711 3300003187 Bacteria 27887
9 JGI25151J46595_10001353 3300003187 Bacteria 16979
10 JGI25153J46596_10001029 3300003215 Bacteria 16979
11 JGI25153J46596_10001780 3300003215 Bacteria 12773
12 JGI25153J46596_10011489 3300003215 Bacteria 3907
13 rootH1_10017248 3300003316 Bacteria 2039
14 rootH1_10034861 3300003316 Bacteria 3672
15 rootH2_10012974 3300003320 Bacteria 7165
16 JGI25160J50197_1000625 3300003354 Bacteria 19742
17 JGI25160J50197_1009524 3300003354 Bacteria 3593
18 JGI25161J50226_1004215 3300003374 Bacteria 3060
19 Ga0006562J51391_1088296 3300003578 Bacteria 3540
20 Ga0006562J51391_1088297 3300003578 Bacteria 6190
21 Ga0055535_1000458 3300003761 Bacteria 37664
22 Ga0055542_1000029 3300003762 Bacteria 248836
23 Ga0055526_1006239 3300003771 Bacteria 6537
24 Ga0055526_1007012 3300003771 Bacteria 5972
25 Ga0055524_1002865 3300003775 Bacteria 8644
26 Ga0055536_1002055 3300003781 Bacteria 11504
27 Ga0055528_1018203 3300003790 Bacteria 2391
28 Ga0055530_10000435 3300003791 Bacteria 37051
29 Ga0055540_1001545 3300003792 Bacteria 13482
30 Ga0055540_1027155 3300003792 Bacteria 1373
31 Ga0055531_10002652 3300003794 Bacteria 11800
32 Ga0055531_10021452 3300003794 Bacteria 2504
33 Ga0055543_1000277 3300004625 Bacteria 37789
34 Ga0055543_1000704 3300004625 Bacteria 17012
35 Ga0065165_1002069 3300005262 Bacteria 18525
36 Ga0065165_1015881 3300005262 Bacteria 2849
37 Ga0070668_100002839 3300005347 Bacteria 12765
38 Ga0068853_100004999 3300005539 Bacteria 10334
39 Ga0070665_100085971 3300005548 Bacteria 3151
40 Ga0068855_100222983 3300005563 Bacteria 2113
41 Ga0068854_100141626 3300005578 Bacteria 1846
42 Ga0068852_100072652 3300005616 Bacteria 3024
43 Ga0068851_10006247 3300005834 Bacteria 5436
44 Ga0075365_10000433 3300006038 Bacteria 15505
45 Ga0075367_10027103 3300006178 Bacteria 3256
46 Ga0075369_10013023 3300006186 Bacteria 3293
47 Ga0075369_10038322 3300006186 Bacteria 2044
48 Ga0075366_10030587 3300006195 Bacteria 3166
49 Ga0075370_10032794 3300006353 Bacteria 2905
50 Ga0105240_10000240 3300009093 Bacteria 109195
51 Ga0105237_10001680 3300009545 Bacteria 28647
52 Ga0105237_10132283 3300009545 Bacteria 2489
53 Ga0105238_10038497 3300009551 Bacteria 4856
54 Ga0157347_1000173 3300012502 Bacteria 3514
55 Ga0157373_10007151 3300013100 Bacteria 8325
56 Ga0157370_10002857 3300013104 Bacteria 20624
57 Ga0182008_10000480 3300014497 Bacteria 30451
58 Ga0182007_10003678 3300015262 Bacteria 7180
59 Ga0182005_1006052 3300015265 Bacteria 3734
60 Ga0209436_103988 3300025208 Bacteria 3739
61 Ga0209672_101364 3300025228 Bacteria 9121
62 Ga0209147_100311 3300025229 Bacteria 37961
63 Ga0209258_100018 3300025242 Bacteria 567561
64 Ga0207425_1000684 3300025245 Bacteria 18534
65 Ga0207425_1001655 3300025245 Bacteria 8948
66 Ga0207425_1001860 3300025245 Bacteria 8116
67 Ga0207425_1002250 3300025245 Bacteria 6983
68 Ga0209677_100927 3300025253 Bacteria 14350
69 Ga0209148_1000030 3300025254 Bacteria 567582
70 Ga0209129_1000277 3300025258 Bacteria 49016
71 Ga0209129_1000465 3300025258 Bacteria 29855
72 Ga0209129_1000544 3300025258 Bacteria 26136
73 Ga0209129_1001682 3300025258 Bacteria 11983
74 Ga0209233_1000203 3300025261 Bacteria 118984
75 Ga0209565_1000465 3300025263 Bacteria 30541
76 Ga0209565_1001542 3300025263 Bacteria 9906
77 Ga0209565_1007127 3300025263 Bacteria 3050
78 Ga0209673_1000138 3300025273 Bacteria 158321
79 Ga0209673_1000610 3300025273 Bacteria 54743
80 Ga0209673_1001712 3300025273 Bacteria 18539
81 Ga0209673_1004001 3300025273 Bacteria 8187
82 Ga0209673_1004016 3300025273 Bacteria 8156
83 Ga0209673_1004083 3300025273 Bacteria 8047
84 Ga0209673_1008874 3300025273 Bacteria 4424
85 Ga0209130_1000253 3300025284 Bacteria 67426
86 Ga0209130_1001016 3300025284 Bacteria 21713
87 Ga0209675_1000278 3300025291 Bacteria 48974
88 Ga0209675_1000757 3300025291 Bacteria 21688
89 Ga0209675_1006901 3300025291 Bacteria 4462
90 Ga0209676_1000005 3300025292 Bacteria 1076001
91 Ga0209676_1004774 3300025292 Bacteria 7379
92 Ga0209025_1000526 3300025294 Bacteria 72957
93 Ga0209025_1000574 3300025294 Bacteria 66723
94 Ga0209025_1002581 3300025294 Bacteria 18770
95 Ga0209025_1007240 3300025294 Bacteria 8345
96 Ga0209025_1013447 3300025294 Bacteria 5142
97 Ga0209025_1013456 3300025294 Bacteria 5139
98 Ga0209564_1000426 3300025295 Bacteria 74234
99 Ga0209564_1001628 3300025295 Bacteria 21774
100 Ga0209564_1004605 3300025295 Bacteria 8316
101 Ga0209564_1005989 3300025295 Bacteria 6722
102 Ga0209758_1000127 3300025297 Bacteria 189368
103 Ga0209758_1001096 3300025297 Bacteria 35059
104 Ga0209758_1001183 3300025297 Bacteria 33014
105 Ga0209758_1006296 3300025297 Bacteria 8621
106 Ga0209050_1000007 3300025298 Bacteria 1187891
107 Ga0209050_1000394 3300025298 Bacteria 81992
108 Ga0209050_1003794 3300025298 Bacteria 10798
109 Ga0209256_1000038 3300025299 Bacteria 375225
110 Ga0209256_1000104 3300025299 Bacteria 189367
111 Ga0209256_1000696 3300025299 Bacteria 44631
112 Ga0209256_1012804 3300025299 Bacteria 3171
113 Ga0209256_1013386 3300025299 Bacteria 3045
114 Ga0207426_1000090 3300025302 Bacteria 280662
115 Ga0207426_1000149 3300025302 Bacteria 189367
116 Ga0207426_1000526 3300025302 Bacteria 55544
117 Ga0207426_1000931 3300025302 Bacteria 29195
118 Ga0209051_1000009 3300025303 Bacteria 706778
119 Ga0209051_1000607 3300025303 Bacteria 41634
120 Ga0209051_1002081 3300025303 Bacteria 15101
121 Ga0209051_1015129 3300025303 Bacteria 3564
122 Ga0209051_1032000 3300025303 Bacteria 2014
123 Ga0209257_1000011 3300025304 Bacteria 1112630
124 Ga0209257_1006263 3300025304 Bacteria 7781
125 Ga0207656_10015599 3300025321 Bacteria 2943
126 Ga0207695_10000118 3300025913 Bacteria 237085
127 Ga0207671_10002694 3300025914 Bacteria 18622
128 Ga0207694_10042896 3300025924 Bacteria 3491
129 Ga0207668_10001653 3300025972 Bacteria 13028
130 Ga0207640_10113776 3300025981 Bacteria 1924
131 Ga0207639_10013492 3300026041 Bacteria 5721
132 Ga0207639_10119169 3300026041 Bacteria 2165
133 Ga0268266_10031159 3300028379 Bacteria 4528
134 Ga0307515_10004408 3300028794 Bacteria 29144
135 Ga0307408_100022333 3300031548 Bacteria 4298
136 Ga0307406_10018351 3300031901 Bacteria 4086
137 Ga0307507_10147765 3300033179 Bacteria 1779
138 Ga0373927_0000191 3300035695 Bacteria 48913
139 Ga0373925_0003006 3300037068 Bacteria 13264
140 Ga0395898_0094574 3300037466 Bacteria 2872
141 Ga0436365_1514104 3300039437 Bacteria 2029
142 Ga0439465_0008421 3300041413 Bacteria 3256
143 Ga0451849_0668808 3300041505 Bacteria 2176
144 Ga0451851_1278647 3300041507 Bacteria 1731
145 Ga0451855_0992070 3300041511 Bacteria 2088
146 Ga0439432_021782 3300042006 Bacteria 2121
147 Ga0439455_0012575 3300042012 Bacteria 1904
148 Ga0451577_0118972 3300042876 Bacteria 2366
149 Ga0466968_0005984 3300044735 Bacteria 4562
150 Ga0451576_0047546 3300045051 Bacteria 4510
151 Ga0495627_015389 3300046453 Bacteria 2642
152 Ga0495591_000081 3300046458 Bacteria 107738
153 Ga0495629_0034571 3300046459 Bacteria 3573
154 Ga0495638_0001641 3300046460 Bacteria 19858
155 Ga0495650_0017357 3300046471 Bacteria 3611
156 Ga0495585_0007474 3300046492 Bacteria 6685
157 Ga0495607_0013153 3300046501 Bacteria 5434
158 Ga0495610_0020983 3300046512 Bacteria 3605
159 Ga0495616_0004780 3300046513 Bacteria 8485
160 Ga0495620_0013015 3300046515 Bacteria 4271
161 Ga0495620_0061154 3300046515 Bacteria 1568
162 Ga0495631_0002140 3300046518 Bacteria 11413
163 Ga0495631_0012392 3300046518 Bacteria 4164
164 Ga0495632_0000078 3300046519 Bacteria 100643
165 Ga0495637_0048116 3300046520 Bacteria 1797
166 Ga0495643_0090903 3300046522 Bacteria 1574
167 Ga0495648_0024317 3300046524 Bacteria 4128
168 Ga0495648_0045300 3300046524 Bacteria 2737
169 Ga0495654_0019552 3300046530 Bacteria 3542
170 Ga0495654_0046168 3300046530 Bacteria 2147
171 Ga0495609_0002899 3300046538 Bacteria 10227
172 Ga0495633_0084822 3300046558 Bacteria 1473
173 Ga0495668_0014242 3300046616 Bacteria 4669
174 Ga0495611_0018541 3300046648 Bacteria 2985
175 Ga0495625_0006922 3300046660 Bacteria 10003
176 Ga0495625_0010629 3300046660 Bacteria 7594
177 Ga0495625_0019441 3300046660 Bacteria 5267
178 Ga0495661_0114897 3300046665 Bacteria 1495
179 Ga0495588_0000899 3300046674 Bacteria 13051
180 Ga0495588_0012394 3300046674 Bacteria 4030
181 Ga0495670_0024990 3300046691 Bacteria 2954
182 Ga0495670_0033934 3300046691 Bacteria 2540
183 Ga0495600_0012211 3300046809 Bacteria 5366
184 Ga0495604_0002343 3300047317 Bacteria 15184
185 Ga0495676_0000492 3300047321 Bacteria 32413
186 Ga0495687_032215 3300047443 Bacteria 2395
187 Ga0495686_0000296 3300047472 Bacteria 86346
188 Ga0495686_0014779 3300047472 Bacteria 5363
189 Ga0495614_0001098 3300048089 Bacteria 11577
190 Ga0496100_0057796 3300048903 Bacteria 2542
191 Ga0496102_0113623 3300048905 Bacteria 2526
192 Ga0496103_0005685 3300048906 Bacteria 7452
193 Ga0496113_0018300 3300048916 Bacteria 4877
194 Ga0496116_0014883 3300048919 Bacteria 6179
195 Ga0496116_0042724 3300048919 Bacteria 3095
196 Ga0496117_0002425 3300048920 Bacteria 23586
197 Ga0496117_0083820 3300048920 Bacteria 2082
198 Ga0496118_0003791 3300048921 Bacteria 18642
199 Ga0496118_0007977 3300048921 Bacteria 11065
200 Ga0496118_0016959 3300048921 Bacteria 6652
201 Ga0496119_0001949 3300048922 Bacteria 23508
202 Ga0496119_0007616 3300048922 Bacteria 9711
203 Ga0496119_0041878 3300048922 Bacteria 2910
204 Ga0496120_0001004 3300048923 Bacteria 38046
205 Ga0496121_0001867 3300048924 Bacteria 33811
206 Ga0496121_0006268 3300048924 Bacteria 14880
207 Ga0496121_0021492 3300048924 Bacteria 6317
208 Ga0496121_0050784 3300048924 Bacteria 3499
209 Ga0496121_0105787 3300048924 Bacteria 2159
210 Ga0496122_0009232 3300048925 Bacteria 10435
211 Ga0496122_0009567 3300048925 Bacteria 10173
212 Ga0496123_0000191 3300048926 Bacteria 124299
213 Ga0496123_0044476 3300048926 Bacteria 3036
214 Ga0496124_0074429 3300048927 Bacteria 2807
215 Ga0496125_0005141 3300048928 Bacteria 14718
216 Ga0496126_0025844 3300048929 Bacteria 5641
217 Ga0501083_0030569 3300049744 Bacteria 3699
218 nmdc:mga03683_3526_c1 3300050489 Bacteria 5064
219 nmdc:mga03683_6175_c1 3300050489 Bacteria 4091
220 nmdc:mga0yw44_9574_c1 3300050492 Bacteria 4909
221 nmdc:mga0k408_236484_c1 3300050493 Bacteria 1091
222 nmdc:mga0sz30_45674_c1 3300050516 Bacteria 1848
223 nmdc:mga0sz30_5410_c1 3300050516 Bacteria 4681
224 Ga0500578_0037158 3300053086 Bacteria 3127
225 Ga0500651_0001096 3300053093 Bacteria 13385
226 Ga0500556_0000096 3300053104 Bacteria 82203
227 Ga0500562_008558 3300053108 Bacteria 2585
228 Ga0500571_000027 3300053110 Bacteria 51623
229 Ga0500618_000048 3300053125 Bacteria 106392
230 Ga0500618_000375 3300053125 Bacteria 30801
231 Ga0500618_003196 3300053125 Bacteria 5732
232 Ga0500618_003860 3300053125 Bacteria 4991
233 Ga0500655_000349 3300053133 Bacteria 10139
234 Ga0500658_0001226 3300053134 Bacteria 10431
235 Ga0500658_0001229 3300053134 Bacteria 10418
236 Ga0500658_0001517 3300053134 Bacteria 9307
237 Ga0500568_0000147 3300053139 Bacteria 61270
238 Ga0500568_0004206 3300053139 Bacteria 7759
239 Ga0500573_0026881 3300053140 Bacteria 3308
240 Ga0500574_000319 3300053141 Bacteria 5933
241 Ga0500590_011402 3300053148 Bacteria 4502
242 Ga0500616_0000482 3300053153 Bacteria 51738
243 Ga0500622_0000618 3300053156 Bacteria 32174
244 Ga0500638_000413 3300053162 Bacteria 10173
245 Ga0500636_0002440 3300053177 Bacteria 10304
246 2510840924 2510461069 Bacteria 5505000
247 2510897650 2510461076 Bacteria 8618824
248 2511132328 2510917022 Bacteria 6504556
249 2511181608 2510917028 Bacteria 6185411
250 2511197896 2510917030 Bacteria 7460662
251 2513580334 2513237085 Bacteria 7695351
252 2513592072 2513237087 Bacteria 5817514
253 2513634134 2513237093 Bacteria 7545552
254 2513707079 2513237103 Bacteria 7647401
255 2513909544 2513237144 Bacteria 7530820
256 2514020364 2513237162 Bacteria 7468464
257 2515110252 2515075009 Bacteria 7288508
258 2515634457 2515154113 Bacteria 7807172
259 2515643682 2515154114 Bacteria 7848616
260 2515657080 2515154116 Bacteria 7552979
261 2515743420 2515154134 Bacteria 7220242
262 2517038935 2516653077 Bacteria 7555578
263 2517079200 2516653085 Bacteria 7346596
264 2517093128 2517093000 Bacteria 7412387
265 2537875163 2537561587 Bacteria 5425293
266 2585225413 2582581298 Bacteria 7315509
267 2585274682 2582581307 Bacteria 6597605
268 2585278578 2582581308 Bacteria 7413247
269 2585324564 2582581315 Bacteria 7318924
270 2585393697 2582581866 Bacteria 6859583
271 2585529381 2585427526 Bacteria 7258840
272 2585535381 2585427527 Bacteria 7273426
273 2585539566 2585427528 Bacteria 6842387
274 2585548312 2585427529 Bacteria 7395659
275 2585556768 2585427530 Bacteria 7383882
276 2585562047 2585427531 Bacteria 6992870
277 2585837523 2585427593 Bacteria 7141551
278 2585902467 2585427608 Bacteria 6544331
279 2585907791 2585427609 Bacteria 6667127
280 2587983211 2585428125 Bacteria 6662905
281 2596372160 2595698237 Bacteria 6712432
282 2599622039 2599185214 Bacteria 8209958
283 2599677019 2599185226 Bacteria 8233575
284 2599680554 2599185227 Bacteria 8246414
285 2599692570 2599185229 Bacteria 8216126
286 2616308096 2615840626 Bacteria 7921970
287 2616555174 2615840698 Bacteria 7319877
288 2725948875 2724679232 Bacteria 7646494
289 2738747634 2738541281 Bacteria 5112672
290 2739036955 2738541333 Bacteria 7106503
291 2739356897 2738543032 Bacteria 5115625
292 2766062797 2765235942 Bacteria 7445910
293 2776910620 2775507049 Bacteria 6284736
294 2793361633 2791355266 Bacteria 7116587
295 2799182882 2799112218 Bacteria 4315149
296 2806047663 2802429633 Bacteria 7341974
297 2806055082 2802429634 Bacteria 7083200
298 2806062016 2802429635 Bacteria 7650140
299 2806067258 2802429636 Bacteria 7597525
300 2806076579 2802429637 Bacteria 7067217
301 2819600886 2818991446 Bacteria 7757362
302 2819613899 2818991448 Bacteria 6772224
303 2819613901 2818991448 Bacteria 6772224
304 2819641025 2818991453 Bacteria 7181617
305 2819642863 2818991453 Bacteria 7181617
306 2821448016 2821443989 Bacteria 7658172
307 2829750915 2829745981 Bacteria 5406054
308 2831270530 2831265667 Bacteria 7184833
309 2838056754 2838054893 Bacteria 7451788
310 2838691703 2838686498 Bacteria 7807632
311 2838733813 2838729681 Bacteria 7400765
312 2838747123 2838742623 Bacteria 7396178
313 2841856264 2841851746 Bacteria 7532261
314 2842112089 2842110456 Bacteria 7656360
315 2842162052 2842156927 Bacteria 6894975
316 2842169571 2842163707 Bacteria 6916235
317 2842185894 2842180545 Bacteria 6888678
318 2842218915 2842217011 Bacteria 7497767
319 2842235422 2842229732 Bacteria 7475766
320 2842248123 2842243621 Bacteria 7421798
321 2842262283 2842257432 Bacteria 7401195
322 2842276676 2842271015 Bacteria 7807131
323 2842306619 2842304105 Bacteria 7023636
324 2842695186 2842694124 Bacteria 4063419
325 2844456112 2844454524 Bacteria 7952546
326 2846541066 2846540461 Bacteria 5471451
327 2857521765 2857516855 Bacteria 7787325
328 2861693039 2861691609 Bacteria 5628931
329 2861695814 2861691609 Bacteria 5628931
330 2889306206 2889306138 Bacteria 6358934
331 2899808633 2899803654 Bacteria 5577784
332 2899931576 2899924645 Bacteria 7487985
333 2902332616 2902330777 Bacteria 6395352
334 2902410143 2902405164 Bacteria 6784948
335 2904455633 2904449895 Bacteria 6927402
336 2904462244 2904456579 Bacteria 6819253
337 2916703009 2916699645 Bacteria 3568996
338 2919100809 2919100787 Bacteria 7710546
339 2919454486 2919450847 Bacteria 5631160
340 2928056584 2928051484 Bacteria 7773759
341 2928068954 2928064002 Bacteria 7419480
342 2928073930 2928070936 Bacteria 8062541
343 2928086226 2928084124 Bacteria 7159212
344 2928129108 2928125067 Bacteria 5937560
345 2929526823 2929520902 Bacteria 6765052
346 2933573688 2933570622 Bacteria 7023390
347 2933587417 2933586486 Bacteria 7667493
348 2935907286 2935901341 Bacteria 7341747
349 2936369049 2936367885 Bacteria 7324495
350 2936377599 2936375103 Bacteria 6652732
351 2984572549 2984568884 Bacteria 3884413
352 3005446609 3005445848 Bacteria 6906074
353 639646532 639633055 Bacteria 7751309
354 8001848319 8001845381 Bacteria 5804942
355 8003322113 8003314358 Bacteria 10575343
356 8005309316 8005307578 Bacteria 7395396
357 8005377553 8005376324 Bacteria 6590079
358 8005460891 8005460587 Bacteria 7157962
359 8005560500 8005556819 Bacteria 6908598
360 8005564041 8005563573 Bacteria 7153261
361 8005576800 8005570704 Bacteria 6957481
362 8005651328 8005645114 Bacteria 6950293
363 8018168900 8018163183 Bacteria 7277977
364 8023684363 8023680758 Bacteria 7729763
365 8054560636 8054558443 Bacteria 5204801
366 8057875915 8057874678 Bacteria 7494653
367 Ga0395905_0000110
368 JGI24739J22299_10009435
369 JGI25152J39213_1001086
370 JGI25152J39213_1002145
371 JGI25152J39213_1005373
372 JGI25150J39212_1001145
373 JGI25159J45721_1006254
374 JGI25151J46595_10000711
375 JGI25151J46595_10001353
376 JGI25153J46596_10001029
377 JGI25153J46596_10001780
378 JGI25153J46596_10011489
379 rootH1_10017248
380 rootH1_10034861
381 rootH2_10012974
382 JGI25160J50197_1000625
383 JGI25160J50197_1009524
384 JGI25161J50226_1004215
385 Ga0006562J51391_1088296
386 Ga0006562J51391_1088297
387 Ga0055535_1000458
388 Ga0055542_1000029
389 Ga0055526_1006239
390 Ga0055526_1007012
391 Ga0055524_1002865
392 Ga0055536_1002055
393 Ga0055528_1018203
394 Ga0055530_10000435
395 Ga0055540_1001545
396 Ga0055540_1027155
397 Ga0055531_10002652
398 Ga0055531_10021452
399 Ga0055543_1000277
400 Ga0055543_1000704
401 Ga0065165_1002069
402 Ga0065165_1015881
403 Ga0070668_100002839
404 Ga0068853_100004999
405 Ga0070665_100085971
406 Ga0068855_100222983
407 Ga0068854_100141626
408 Ga0068852_100072652
409 Ga0068851_10006247
410 Ga0075365_10000433
411 Ga0075367_10027103
412 Ga0075369_10013023
413 Ga0075369_10038322
414 Ga0075366_10030587
415 Ga0075370_10032794
416 Ga0105240_10000240
417 Ga0105237_10001680
418 Ga0105237_10132283
419 Ga0105238_10038497
420 Ga0157347_1000173
421 Ga0157373_10007151
422 Ga0157370_10002857
423 Ga0182008_10000480
424 Ga0182007_10003678
425 Ga0182005_1006052
426 Ga0209436_103988
427 Ga0209672_101364
428 Ga0209147_100311
429 Ga0209258_100018
430 Ga0207425_1000684
431 Ga0207425_1001655
432 Ga0207425_1001860
433 Ga0207425_1002250
434 Ga0209677_100927
435 Ga0209148_1000030
436 Ga0209129_1000277
437 Ga0209129_1000465
438 Ga0209129_1000544
439 Ga0209129_1001682
440 Ga0209233_1000203
441 Ga0209565_1000465
442 Ga0209565_1001542
443 Ga0209565_1007127
444 Ga0209673_1000138
445 Ga0209673_1000610
446 Ga0209673_1001712
447 Ga0209673_1004001
448 Ga0209673_1004016
449 Ga0209673_1004083
450 Ga0209673_1008874
451 Ga0209130_1000253
452 Ga0209130_1001016
453 Ga0209675_1000278
454 Ga0209675_1000757
455 Ga0209675_1006901
456 Ga0209676_1000005
457 Ga0209676_1004774
458 Ga0209025_1000526
459 Ga0209025_1000574
460 Ga0209025_1002581
461 Ga0209025_1007240
462 Ga0209025_1013447
463 Ga0209025_1013456
464 Ga0209564_1000426
465 Ga0209564_1001628
466 Ga0209564_1004605
467 Ga0209564_1005989
468 Ga0209758_1000127
469 Ga0209758_1001096
470 Ga0209758_1001183
471 Ga0209758_1006296
472 Ga0209050_1000007
473 Ga0209050_1000394
474 Ga0209050_1003794
475 Ga0209256_1000038
476 Ga0209256_1000104
477 Ga0209256_1000696
478 Ga0209256_1012804
479 Ga0209256_1013386
480 Ga0207426_1000090
481 Ga0207426_1000149
482 Ga0207426_1000526
483 Ga0207426_1000931
484 Ga0209051_1000009
485 Ga0209051_1000607
486 Ga0209051_1002081
487 Ga0209051_1015129
488 Ga0209051_1032000
489 Ga0209257_1000011
490 Ga0209257_1006263
491 Ga0207656_10015599
492 Ga0207695_10000118
493 Ga0207671_10002694
494 Ga0207694_10042896
495 Ga0207668_10001653
496 Ga0207640_10113776
497 Ga0207639_10013492
498 Ga0207639_10119169
499 Ga0268266_10031159
500 Ga0307515_10004408
501 Ga0307408_100022333
502 Ga0307406_10018351
503 Ga0307507_10147765
504 Ga0373927_0000191
505 Ga0373925_0003006
506 Ga0395898_0094574
507 Ga0436365_1514104
508 Ga0439465_0008421
509 Ga0451849_0668808
510 Ga0451851_1278647
511 Ga0451855_0992070
512 Ga0439432_021782
513 Ga0439455_0012575
514 Ga0451577_0118972
515 Ga0466968_0005984
516 Ga0451576_0047546
517 Ga0495627_015389
518 Ga0495591_000081
519 Ga0495629_0034571
520 Ga0495638_0001641
521 Ga0495650_0017357
522 Ga0495585_0007474
523 Ga0495607_0013153
524 Ga0495610_0020983
525 Ga0495616_0004780
526 Ga0495620_0013015
527 Ga0495620_0061154
528 Ga0495631_0002140
529 Ga0495631_0012392
530 Ga0495632_0000078
531 Ga0495637_0048116
532 Ga0495643_0090903
533 Ga0495648_0024317
534 Ga0495648_0045300
535 Ga0495654_0019552
536 Ga0495654_0046168
537 Ga0495609_0002899
538 Ga0495633_0084822
539 Ga0495668_0014242
540 Ga0495611_0018541
541 Ga0495625_0006922
542 Ga0495625_0010629
543 Ga0495625_0019441
544 Ga0495661_0114897
545 Ga0495588_0000899
546 Ga0495588_0012394
547 Ga0495670_0024990
548 Ga0495670_0033934
549 Ga0495600_0012211
550 Ga0495604_0002343
551 Ga0495676_0000492
552 Ga0495687_032215
553 Ga0495686_0000296
554 Ga0495686_0014779
555 Ga0495614_0001098
556 Ga0496100_0057796
557 Ga0496102_0113623
558 Ga0496103_0005685
559 Ga0496113_0018300
560 Ga0496116_0014883
561 Ga0496116_0042724
562 Ga0496117_0002425
563 Ga0496117_0083820
564 Ga0496118_0003791
565 Ga0496118_0007977
566 Ga0496118_0016959
567 Ga0496119_0001949
568 Ga0496119_0007616
569 Ga0496119_0041878
570 Ga0496120_0001004
571 Ga0496121_0001867
572 Ga0496121_0006268
573 Ga0496121_0021492
574 Ga0496121_0050784
575 Ga0496121_0105787
576 Ga0496122_0009232
577 Ga0496122_0009567
578 Ga0496123_0000191
579 Ga0496123_0044476
580 Ga0496124_0074429
581 Ga0496125_0005141
582 Ga0496126_0025844
583 Ga0501083_0030569
584 nmdc:mga03683_3526_c1
585 nmdc:mga03683_6175_c1
586 nmdc:mga0yw44_9574_c1
587 nmdc:mga0k408_236484_c1
588 nmdc:mga0sz30_45674_c1
589 nmdc:mga0sz30_5410_c1
590 Ga0500578_0037158
591 Ga0500651_0001096
592 Ga0500556_0000096
593 Ga0500562_008558
594 Ga0500571_000027
595 Ga0500618_000048
596 Ga0500618_000375
597 Ga0500618_003196
598 Ga0500618_003860
599 Ga0500655_000349
600 Ga0500658_0001226
601 Ga0500658_0001229
602 Ga0500658_0001517
603 Ga0500568_0000147
604 Ga0500568_0004206
605 Ga0500573_0026881
606 Ga0500574_000319
607 Ga0500590_011402
608 Ga0500616_0000482
609 Ga0500622_0000618
610 Ga0500638_000413
611 Ga0500636_0002440
612 2510840924
613 2510897650
614 2511132328
615 2511181608
616 2511197896
617 2513580334
618 2513592072
619 2513634134
620 2513707079
621 2513909544
622 2514020364
623 2515110252
624 2515634457
625 2515643682
626 2515657080
627 2515743420
628 2517038935
629 2517079200
630 2517093128
631 2537875163
632 2585225413
633 2585274682
634 2585278578
635 2585324564
636 2585393697
637 2585529381
638 2585535381
639 2585539566
640 2585548312
641 2585556768
642 2585562047
643 2585837523
644 2585902467
645 2585907791
646 2587983211
647 2596372160
648 2599622039
649 2599677019
650 2599680554
651 2599692570
652 2616308096
653 2616555174
654 2725948875
655 2738747634
656 2739036955
657 2739356897
658 2766062797
659 2776910620
660 2793361633
661 2799182882
662 2806047663
663 2806055082
664 2806062016
665 2806067258
666 2806076579
667 2819600886
668 2819613899
669 2819613901
670 2819641025
671 2819642863
672 2821448016
673 2829750915
674 2831270530
675 2838056754
676 2838691703
677 2838733813
678 2838747123
679 2841856264
680 2842112089
681 2842162052
682 2842169571
683 2842185894
684 2842218915
685 2842235422
686 2842248123
687 2842262283
688 2842276676
689 2842306619
690 2842695186
691 2844456112
692 2846541066
693 2857521765
694 2861693039
695 2861695814
696 2889306206
697 2899808633
698 2899931576
699 2902332616
700 2902410143
701 2904455633
702 2904462244
703 2916703009
704 2919100809
705 2919454486
706 2928056584
707 2928068954
708 2928073930
709 2928086226
710 2928129108
711 2929526823
712 2933573688
713 2933587417
714 2935907286
715 2936369049
716 2936377599
717 2984572549
718 3005446609
719 639646532
720 8001848319
721 8003322113
722 8005309316
723 8005377553
724 8005460891
725 8005560500
726 8005564041
727 8005576800
728 8005651328
729 8018168900
730 8023684363
731 8054560636
732 8057875915

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01494

FAD_binding_3

FAD binding domain

6

46

0.93

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

10

214

0.84

PF00743

FMO-like

Flavin-binding monooxygenase-like

65

214

0.83

PF13434

Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

74

208

0.79

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

7

223

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mig-assembly1.cif.gz_C pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9584 11 42
4mig-assembly1.cif.gz_A pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9573 11 42
4mig-assembly1.cif.gz_B pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9572 11 42
4mif-assembly1.cif.gz_D pyranose 2-oxidase from phanerochaete chrysosporium, wild type from natural source 0.9559 11 42
4mif-assembly1.cif.gz_B pyranose 2-oxidase from phanerochaete chrysosporium, wild type from natural source 0.9525 11 42
ID Description Score Start End Superfamily
af_P45522_400_562_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9387 11 41 3.40.50.720
3l4bH01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9168 12 41 3.40.50.720
4j0fB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9141 13 43 3.40.50.720
af_O60112_6_422_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9123 11 43 3.30.300.30
5mhaA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9115 176 204 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A5N7Y801-F1-model_v4 deleted 0.9414 7 136
AF-A0A1B1TW53-F1-model_v4 deleted 0.9382 8 419
AF-A0A1L9QQL8-F1-model_v4 FAD-dependent oxidoreductase 0.9379 8 420 GO:0004497
GO:0050660
AF-A0A5E7FRP9-F1-model_v4 FAD-dependent oxidoreductase 0.9374 8 415 GO:0004497
GO:0050660
AF-A0A4Q7GA81-F1-model_v4 MSMEG_0569 family flavin-dependent oxidoreductase 0.9361 8 420 GO:0004497
GO:0050660

Map