F424317

General Info

Members Datasets Scaffolds Average Seq Length
367 231 724 292

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10000297|Ga0105240_1000029773
Length 326
Sequence LIFLTLRPLFFRIRFSATIVNERSRSLCIGIIMKRVILFLVTNLAVMLVLSVTASILGINRYMTANGLNFGMLLMFCALMGFGGSFISLLLSKTIAKWSTGARVIEHPQNSTEMWLVDTVNRLATRAGLTMPEVAVYDGPPNAFATGASKSNSLVAVSTGLLQGMTKEEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVMFFARIVGYFVDSALRRNNEQSSGPGIGYMVTVVVCEIVFGILASIIVMYFSRQREYRADSGAAKLMGSPTPMIGALRRLGGMEADGLPQNLQASGIAGRGSWMGLFSSHPPIESRIASLQGRANA

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
8 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
12 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
13 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
14 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
15 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
16 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
17 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
18 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
19 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
20 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
21 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
57 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
61 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
70 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
71 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
73 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
74 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
82 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
117 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
118 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
119 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
120 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
124 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
125 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
126 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
127 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
128 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
129 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
130 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
131 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
132 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
133 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
134 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
135 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
136 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
140 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
143 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
144 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
145 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
146 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
147 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
148 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
149 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
152 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
153 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
154 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
155 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
156 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
157 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
158 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
159 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
160 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
163 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
164 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
165 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
166 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
167 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
168 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
169 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
170 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
171 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
174 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
175 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
176 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
179 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
183 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
184 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
187 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
188 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
189 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
190 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
191 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
192 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
193 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
194 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
195 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
196 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
197 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
198 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
199 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
200 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
201 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
202 2818991436 Collimonas arenae 515 Isolate Unclassified
203 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
204 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
205 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
206 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
207 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
208 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
209 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
210 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
211 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
212 2857564685 Duganella sp. R-74599 Isolate Unclassified
213 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
214 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
215 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
216 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
217 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
218 2904424332 Duganella sp. 1411 Isolate Rhizosphere
219 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
220 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
221 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
222 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
223 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
224 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
225 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
226 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
227 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
228 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
229 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
230 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
231 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.1
Metatranscriptomes 0
Isolates 13.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.16
Nodule 2.45
Rhizoplane 1.91
Rhizosphere 56.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10000297 3300009093 Bacteria 96825
2 JGI25155J39150_1000160 3300002704 Bacteria 30113
3 JGI25155J39150_1000161 3300002704 Bacteria 30010
4 JGI25156J39149_1000309 3300002705 Bacteria 32348
5 JGI25156J39149_1000348 3300002705 Bacteria 30009
6 JGI25156J39149_1000701 3300002705 Bacteria 17867
7 JGI25156J39149_1005029 3300002705 Bacteria 3904
8 JGI25162J39368_1000015 3300002737 Bacteria 316381
9 JGI25162J39368_1005836 3300002737 Bacteria 2279
10 JGI25154J39366_1000188 3300002738 Bacteria 46212
11 JGI25154J39366_1000256 3300002738 Bacteria 33932
12 JGI25154J39366_1000292 3300002738 Bacteria 30017
13 JGI25154J39366_1002194 3300002738 Bacteria 5413
14 JGI25157J39369_1000206 3300002741 Bacteria 49227
15 JGI25157J39369_1000233 3300002741 Bacteria 43165
16 JGI25164J39214_1002658 3300002772 Bacteria 2600
17 JGI25151J46595_10001099 3300003187 Bacteria 19902
18 JGI25151J46595_10001952 3300003187 Bacteria 13045
19 JGI25151J46595_10018255 3300003187 Bacteria 3020
20 JGI25165J46597_1000001 3300003214 Bacteria 1111887
21 rootL2_10043287 3300003322 Bacteria 11407
22 Ga0055538_1000001 3300003751 Bacteria 1111887
23 Ga0055538_1000002 3300003751 Bacteria 999437
24 Ga0055538_1000054 3300003751 Bacteria 123566
25 Ga0055539_1000001 3300003752 Bacteria 1111887
26 Ga0055539_1000002 3300003752 Bacteria 999437
27 Ga0055539_1000066 3300003752 Bacteria 136557
28 Ga0055533_1000003 3300003756 Bacteria 1111887
29 Ga0055533_1000004 3300003756 Bacteria 999437
30 Ga0055533_1000076 3300003756 Bacteria 136557
31 Ga0055532_1000016 3300003758 Bacteria 327509
32 Ga0055532_1000097 3300003758 Bacteria 98781
33 Ga0055525_1000002 3300003759 Bacteria 999437
34 Ga0055525_1000003 3300003759 Bacteria 962094
35 Ga0055525_1000098 3300003759 Bacteria 136557
36 Ga0055535_1007861 3300003761 Bacteria 1983
37 Ga0055526_1009581 3300003771 Bacteria 4635
38 Ga0055524_1000413 3300003775 Bacteria 36091
39 Ga0055524_1018987 3300003775 Bacteria 2366
40 Ga0055536_1000061 3300003781 Bacteria 100255
41 Ga0055534_1002344 3300003784 Bacteria 6617
42 Ga0055541_1000001 3300003841 Bacteria 1111887
43 Ga0055541_1000002 3300003841 Bacteria 896405
44 Ga0055541_1000056 3300003841 Bacteria 123566
45 Ga0070658_10208967 3300005327 Bacteria 1648
46 Ga0070676_10007710 3300005328 Bacteria 5779
47 Ga0070670_100168191 3300005331 Bacteria 1901
48 Ga0070670_100314153 3300005331 Bacteria 1372
49 Ga0070666_10173696 3300005335 Bacteria 1510
50 Ga0070682_100157928 3300005337 Bacteria 1563
51 Ga0070668_100322381 3300005347 Bacteria 1301
52 Ga0070671_100140029 3300005355 Bacteria 2041
53 Ga0070674_100160453 3300005356 Bacteria 1706
54 Ga0070667_100008559 3300005367 Bacteria 8480
55 Ga0070678_100000697 3300005456 Bacteria 16601
56 Ga0070681_10001273 3300005458 Bacteria 21994
57 Ga0068853_100093052 3300005539 Bacteria 2653
58 Ga0068853_100336278 3300005539 Bacteria 1402
59 Ga0070672_100152128 3300005543 Bacteria 1915
60 Ga0070672_100485567 3300005543 Bacteria 1067
61 Ga0070665_100651644 3300005548 Bacteria 1066
62 Ga0068855_100000115 3300005563 Bacteria 100226
63 Ga0068855_100113554 3300005563 Bacteria 3107
64 Ga0068854_100059884 3300005578 Bacteria 2753
65 Ga0068856_100069837 3300005614 Bacteria 3474
66 Ga0068852_100104719 3300005616 Bacteria 2561
67 Ga0068864_100196149 3300005618 Bacteria 1853
68 Ga0068858_100007150 3300005842 Bacteria 10832
69 Ga0068858_100042652 3300005842 Bacteria 4206
70 Ga0105251_10003625 3300009011 Bacteria 11098
71 Ga0105251_10017214 3300009011 Bacteria 3880
72 Ga0105244_10002354 3300009036 Bacteria 14352
73 Ga0105240_10009752 3300009093 Bacteria 13559
74 Ga0105247_10140769 3300009101 Bacteria 1581
75 Ga0105248_10481625 3300009177 Bacteria 1399
76 Ga0105237_10007117 3300009545 Bacteria 12291
77 Ga0105238_10005814 3300009551 Bacteria 12210
78 Ga0105238_10128491 3300009551 Bacteria 2512
79 Ga0157370_10005452 3300013104 Bacteria 14268
80 Ga0157374_10000385 3300013296 Bacteria 40495
81 Ga0157378_10285852 3300013297 Bacteria 1591
82 Ga0163163_10016741 3300014325 Bacteria 6820
83 Ga0182008_10000357 3300014497 Bacteria 35568
84 Ga0182008_10064745 3300014497 Bacteria 1799
85 Ga0157379_10008059 3300014968 Bacteria 9148
86 Ga0157376_10015463 3300014969 Bacteria 5765
87 Ga0182006_1000002 3300015261 Bacteria 887990
88 Ga0182006_1001697 3300015261 Bacteria 12866
89 Ga0182006_1010057 3300015261 Bacteria 4217
90 Ga0182006_1017627 3300015261 Bacteria 3030
91 Ga0182007_10000162 3300015262 Bacteria 46148
92 Ga0182007_10001622 3300015262 Bacteria 11922
93 Ga0182005_1000029 3300015265 Bacteria 214132
94 Ga0182005_1000525 3300015265 Bacteria 19487
95 Ga0163161_10041320 3300017792 Bacteria 3314
96 Ga0213872_10003816 3300021361 Bacteria 8210
97 Ga0213872_10004615 3300021361 Bacteria 7261
98 Ga0209435_100040 3300025206 Bacteria 115475
99 Ga0209435_100070 3300025206 Bacteria 63829
100 Ga0209435_100117 3300025206 Bacteria 29514
101 Ga0209784_100002 3300025224 Bacteria 1753105
102 Ga0209784_100004 3300025224 Bacteria 1378156
103 Ga0209566_100003 3300025225 Bacteria 1753105
104 Ga0209566_100004 3300025225 Bacteria 1531866
105 Ga0209674_100004 3300025226 Bacteria 1753105
106 Ga0209674_100006 3300025226 Bacteria 1531866
107 Ga0209147_100023 3300025229 Bacteria 437803
108 Ga0209147_100141 3300025229 Bacteria 115466
109 Ga0209563_100006 3300025230 Bacteria 1753105
110 Ga0209563_100009 3300025230 Bacteria 1378156
111 Ga0207427_100567 3300025231 Bacteria 18645
112 Ga0209437_100004 3300025233 Bacteria 1378156
113 Ga0209437_100080 3300025233 Bacteria 275402
114 Ga0209437_100229 3300025233 Bacteria 95900
115 Ga0209258_100179 3300025242 Bacteria 137687
116 Ga0209258_100346 3300025242 Bacteria 66811
117 Ga0209646_1000033 3300025246 Bacteria 369507
118 Ga0209646_1000218 3300025246 Bacteria 62078
119 Ga0209646_1000270 3300025246 Bacteria 48877
120 Ga0209026_1000150 3300025250 Bacteria 111025
121 Ga0209026_1000534 3300025250 Bacteria 26239
122 Ga0209677_100003 3300025253 Bacteria 1753105
123 Ga0209677_100005 3300025253 Bacteria 1378156
124 Ga0209759_1000359 3300025256 Bacteria 58766
125 Ga0209759_1000408 3300025256 Bacteria 52948
126 Ga0209759_1000447 3300025256 Bacteria 47749
127 Ga0209233_1000005 3300025261 Bacteria 1531866
128 Ga0209565_1000257 3300025263 Bacteria 56512
129 Ga0209455_1004118 3300025272 Bacteria 4886
130 Ga0209673_1021572 3300025273 Bacteria 2248
131 Ga0209675_1000385 3300025291 Bacteria 36755
132 Ga0209675_1003734 3300025291 Bacteria 7068
133 Ga0209676_1000183 3300025292 Bacteria 145352
134 Ga0209025_1000229 3300025294 Bacteria 131241
135 Ga0209025_1000723 3300025294 Bacteria 56017
136 Ga0209025_1003505 3300025294 Bacteria 14747
137 Ga0209025_1003948 3300025294 Bacteria 13309
138 Ga0209564_1000310 3300025295 Bacteria 95920
139 Ga0209564_1000505 3300025295 Bacteria 64298
140 Ga0209564_1000536 3300025295 Bacteria 61397
141 Ga0209758_1009167 3300025297 Bacteria 6226
142 Ga0209256_1000248 3300025299 Bacteria 95920
143 Ga0209256_1000746 3300025299 Bacteria 42579
144 Ga0209051_1009588 3300025303 Bacteria 4974
145 Ga0207655_1008972 3300025728 Bacteria 6272
146 Ga0207710_10082459 3300025900 Bacteria 1494
147 Ga0207680_10012720 3300025903 Bacteria 4296
148 Ga0207705_10056869 3300025909 Bacteria 2822
149 Ga0207695_10001772 3300025913 Bacteria 34083
150 Ga0207695_10005302 3300025913 Bacteria 17177
151 Ga0207695_10009601 3300025913 Bacteria 11947
152 Ga0207695_10030712 3300025913 Bacteria 5912
153 Ga0207694_10005631 3300025924 Bacteria 9605
154 Ga0207650_10149034 3300025925 Bacteria 1845
155 Ga0207669_10250110 3300025937 Bacteria 1319
156 Ga0207691_10013887 3300025940 Bacteria 7685
157 Ga0207667_10000025 3300025949 Bacteria 350159
158 Ga0207667_10000067 3300025949 Bacteria 184547
159 Ga0207667_10068794 3300025949 Bacteria 3686
160 Ga0207667_10114317 3300025949 Bacteria 2782
161 Ga0207640_10086601 3300025981 Bacteria 2157
162 Ga0207703_10017151 3300026035 Bacteria 5648
163 Ga0207703_10031795 3300026035 Bacteria 4174
164 Ga0207639_10075009 3300026041 Bacteria 2658
165 Ga0207702_10104315 3300026078 Bacteria 2509
166 Ga0207648_10091057 3300026089 Bacteria 2666
167 Ga0207683_10006579 3300026121 Bacteria 9947
168 Ga0207698_10005976 3300026142 Bacteria 7563
169 Ga0207698_10006589 3300026142 Bacteria 7260
170 Ga0268266_10059818 3300028379 Bacteria 3282
171 Ga0265316_10022278 3300031344 Bacteria 5346
172 Ga0307408_100044999 3300031548 Bacteria 3150
173 Ga0307405_10208978 3300031731 Bacteria 1423
174 Ga0307413_10033888 3300031824 Bacteria 2913
175 Ga0307413_10338767 3300031824 Bacteria 1156
176 Ga0307414_10032451 3300032004 Bacteria 3438
177 Ga0395901_0224627 3300038443 Bacteria 1962
178 Ga0436361_0200296 3300039447 Bacteria 9744
179 Ga0436361_0326827 3300039447 Bacteria 14258
180 Ga0436361_1043985 3300039447 Bacteria 3755
181 Ga0453684_0000014 3300044712 Bacteria 993311
182 Ga0466957_0029030 3300044842 Bacteria 3296
183 Ga0466967_0429504 3300045976 Bacteria 1289
184 Ga0495590_0000101 3300046457 Bacteria 52125
185 Ga0495651_0003787 3300046462 Bacteria 11571
186 Ga0495653_0000001 3300046463 Bacteria 720352
187 Ga0495653_0001109 3300046463 Bacteria 20752
188 Ga0495650_0000131 3300046471 Bacteria 174698
189 Ga0495605_0003550 3300046474 Bacteria 9245
190 Ga0495605_0003834 3300046474 Bacteria 8916
191 Ga0495585_0025990 3300046492 Bacteria 3348
192 Ga0495585_0116795 3300046492 Bacteria 1414
193 Ga0495596_0000723 3300046500 Bacteria 20358
194 Ga0495596_0004856 3300046500 Bacteria 6456
195 Ga0495607_0003026 3300046501 Bacteria 13105
196 Ga0495607_0003697 3300046501 Bacteria 11599
197 Ga0495583_0000141 3300046506 Bacteria 121899
198 Ga0495606_0010853 3300046507 Bacteria 7505
199 Ga0495606_0053033 3300046507 Bacteria 2633
200 Ga0495608_0006903 3300046511 Bacteria 8042
201 Ga0495608_0175261 3300046511 Bacteria 1358
202 Ga0495610_0001151 3300046512 Bacteria 24058
203 Ga0495610_0006407 3300046512 Bacteria 8104
204 Ga0495616_0022665 3300046513 Bacteria 3389
205 Ga0495616_0029803 3300046513 Bacteria 2876
206 Ga0495628_0003023 3300046516 Bacteria 15076
207 Ga0495628_0010092 3300046516 Bacteria 8033
208 Ga0495631_0005812 3300046518 Bacteria 6431
209 Ga0495631_0073226 3300046518 Bacteria 1479
210 Ga0495643_0008885 3300046522 Bacteria 6316
211 Ga0495644_0011848 3300046523 Bacteria 3355
212 Ga0495644_0017970 3300046523 Bacteria 2701
213 Ga0495648_0000264 3300046524 Bacteria 59176
214 Ga0495648_0000510 3300046524 Bacteria 41818
215 Ga0495648_0001026 3300046524 Bacteria 28493
216 Ga0495642_0025277 3300046528 Bacteria 2353
217 Ga0495652_0027444 3300046529 Bacteria 5016
218 Ga0495654_0070866 3300046530 Bacteria 1652
219 Ga0495609_0045065 3300046538 Bacteria 1977
220 Ga0495597_0028693 3300046542 Bacteria 2545
221 Ga0495597_0031554 3300046542 Bacteria 2410
222 Ga0495622_0025071 3300046557 Bacteria 2786
223 Ga0495622_0029771 3300046557 Bacteria 2551
224 Ga0495633_0003683 3300046558 Bacteria 10114
225 Ga0495633_0016185 3300046558 Bacteria 3853
226 Ga0495668_0085994 3300046616 Bacteria 1725
227 Ga0495625_0001004 3300046660 Bacteria 37269
228 Ga0495625_0001713 3300046660 Bacteria 25509
229 Ga0495625_0028726 3300046660 Bacteria 4167
230 Ga0495661_0005012 3300046665 Bacteria 9454
231 Ga0495588_0004651 3300046674 Bacteria 6060
232 Ga0495588_0042398 3300046674 Bacteria 2326
233 Ga0495588_0044439 3300046674 Bacteria 2275
234 Ga0495657_0120209 3300046675 Bacteria 1655
235 Ga0495599_0001025 3300046678 Bacteria 15709
236 Ga0495623_0067601 3300046679 Bacteria 2230
237 Ga0495646_0006783 3300046680 Bacteria 7266
238 Ga0495646_0022406 3300046680 Bacteria 3985
239 Ga0495669_0019483 3300046684 Bacteria 2928
240 Ga0495624_0030236 3300046690 Bacteria 3529
241 Ga0495624_0094379 3300046690 Bacteria 1844
242 Ga0495670_0000765 3300046691 Bacteria 15421
243 Ga0495670_0202128 3300046691 Bacteria 1052
244 Ga0495671_0000370 3300046692 Bacteria 36938
245 Ga0495649_0000004 3300046694 Bacteria 699364
246 Ga0495649_0000005 3300046694 Bacteria 634408
247 Ga0495649_0002284 3300046694 Bacteria 13617
248 Ga0495589_0004449 3300046794 Bacteria 7449
249 Ga0495600_0022011 3300046809 Bacteria 4089
250 Ga0495581_0083948 3300047315 Bacteria 1845
251 Ga0495604_0002071 3300047317 Bacteria 16186
252 Ga0495672_0000007 3300047320 Bacteria 578827
253 Ga0495672_0000017 3300047320 Bacteria 454975
254 Ga0495672_0077634 3300047320 Bacteria 1861
255 Ga0495683_0000752 3300047323 Bacteria 23393
256 Ga0495687_009462 3300047443 Bacteria 5442
257 Ga0495687_027233 3300047443 Bacteria 2678
258 Ga0495677_0025217 3300047445 Bacteria 2157
259 Ga0495679_003740 3300047446 Bacteria 7235
260 Ga0495673_0000239 3300047469 Bacteria 77968
261 Ga0495673_0028192 3300047469 Bacteria 2661
262 Ga0495673_0038957 3300047469 Bacteria 2159
263 Ga0495673_0070889 3300047469 Bacteria 1466
264 Ga0495681_0070375 3300047470 Bacteria 1586
265 Ga0495686_0003175 3300047472 Bacteria 14485
266 Ga0495602_0051818 3300048088 Bacteria 3651
267 Ga0495614_0051898 3300048089 Bacteria 1758
268 Ga0495626_0020368 3300048091 Bacteria 3307
269 Ga0495626_0040347 3300048091 Bacteria 2205
270 Ga0496101_0034457 3300048904 Bacteria 3576
271 Ga0496111_0027080 3300048914 Bacteria 4052
272 Ga0496114_0013290 3300048917 Bacteria 6600
273 Ga0496114_0015799 3300048917 Bacteria 6075
274 Ga0496115_0046550 3300048918 Bacteria 3467
275 Ga0496115_0356240 3300048918 Bacteria 1193
276 Ga0496116_0003240 3300048919 Bacteria 16214
277 Ga0496116_0005331 3300048919 Bacteria 11983
278 Ga0496116_0005458 3300048919 Bacteria 11776
279 Ga0496116_0029437 3300048919 Bacteria 3959
280 Ga0496116_0033310 3300048919 Bacteria 3658
281 Ga0496117_0000001 3300048920 Bacteria 2526244
282 Ga0496118_0000008 3300048921 Bacteria 644537
283 Ga0496121_0009467 3300048924 Bacteria 11193
284 Ga0496121_0037215 3300048924 Bacteria 4325
285 Ga0496121_0047593 3300048924 Bacteria 3657
286 Ga0496122_0000455 3300048925 Bacteria 85041
287 Ga0496122_0000892 3300048925 Bacteria 55236
288 Ga0496122_0006027 3300048925 Bacteria 14139
289 Ga0496123_0000197 3300048926 Bacteria 122784
290 Ga0496123_0000842 3300048926 Bacteria 48999
291 Ga0496123_0005378 3300048926 Bacteria 12909
292 Ga0496123_0023883 3300048926 Bacteria 4667
293 Ga0496124_0072402 3300048927 Bacteria 2854
294 Ga0496124_0076014 3300048927 Bacteria 2773
295 Ga0496125_0000356 3300048928 Bacteria 86420
296 Ga0496125_0003177 3300048928 Bacteria 20359
297 Ga0496125_0004893 3300048928 Bacteria 15183
298 Ga0496126_0361382 3300048929 Bacteria 1186
299 Ga0495682_0000002 3300049460 Bacteria 595732
300 Ga0495682_0000036 3300049460 Bacteria 125400
301 Ga0495682_0008033 3300049460 Bacteria 4173
302 Ga0501034_0000260 3300049571 Bacteria 95474
303 Ga0501036_0289848 3300049572 Bacteria 1370
304 Ga0501040_0079314 3300049576 Bacteria 2273
305 Ga0501076_0144053 3300049592 Bacteria 1937
306 Ga0501249_002684 3300049679 Bacteria 3586
307 Ga0501269_000195 3300049766 Bacteria 18239
308 Ga0495601_0003885 3300053077 Bacteria 8598
309 Ga0500618_000756 3300053125 Bacteria 18284
310 Ga0500573_0200700 3300053140 Bacteria 1059
311 Ga0500619_000640 3300053154 Bacteria 5943
312 2511251407 2511231003 Bacteria 5606035
313 2511384983 2511231026 Bacteria 5225445
314 2513956997 2513237150 Bacteria 6553639
315 2514043161 2513237165 Bacteria 6771773
316 2521557922 2521172590 Bacteria 5047645
317 2547374540 2547132103 Bacteria 5115736
318 2550693840 2548876994 Bacteria 4904866
319 2550693963 2548876994 Bacteria 4904866
320 2553003048 2551306416 Bacteria 6152985
321 2601670757 2600255292 Bacteria 6300551
322 2765568613 2765235838 Bacteria 5445269
323 2765569045 2765235838 Bacteria 5445269
324 2808984450 2808606386 Bacteria 4471946
325 2809131176 2808606415 Bacteria 4576710
326 2809150489 2808606419 Bacteria 4576925
327 2819540745 2818991436 Bacteria 5376622
328 2819591209 2818991445 Bacteria 4955017
329 2819595115 2818991445 Bacteria 4955017
330 2819614934 2818991449 Bacteria 5518009
331 2834643866 2834641062 Bacteria 5559922
332 2839096069 2839094727 Bacteria 5534556
333 2839096506 2839094727 Bacteria 5534556
334 2843692060 2843690924 Bacteria 5169057
335 2846034613 2846033681 Bacteria 4377894
336 2846038795 2846037992 Bacteria 4526407
337 2852622003 2852618963 Bacteria 4577824
338 2857552652 2857547612 Bacteria 6179999
339 2857565316 2857564685 Bacteria 6290584
340 2884815760 2884811622 Bacteria 5552861
341 2884816691 2884811622 Bacteria 5552861
342 2884836818 2884836552 Bacteria 5219991
343 2884836938 2884836552 Bacteria 5219991
344 2884853109 2884852848 Bacteria 5221161
345 2884853229 2884852848 Bacteria 5221161
346 2885085689 2885080285 Bacteria 6355622
347 2896155653 2896154374 Bacteria 5221518
348 2896155773 2896154374 Bacteria 5221518
349 2904426623 2904424332 Bacteria 7633521
350 2904441308 2904439833 Bacteria 5931679
351 2904531752 2904530477 Bacteria 5876334
352 2904588023 2904584206 Bacteria 6028872
353 2904589817 2904589729 Bacteria 6113573
354 2904602797 2904601388 Bacteria 5884906
355 2919046386 2919046199 Bacteria 5567169
356 2919079699 2919079590 Bacteria 5946433
357 2923511161 2923510766 Bacteria 5926163
358 2928131101 2928130867 Bacteria 5467269
359 2932414968 2932410948 Bacteria 6312192
360 2932419654 2932416698 Bacteria 6315112
361 644749386 644736347 Bacteria 6476522
362 8003404822 8003400568 Bacteria 5535898
363 Ga0105240_10000297
364 JGI25155J39150_1000160
365 JGI25155J39150_1000161
366 JGI25156J39149_1000309
367 JGI25156J39149_1000348
368 JGI25156J39149_1000701
369 JGI25156J39149_1005029
370 JGI25162J39368_1000015
371 JGI25162J39368_1005836
372 JGI25154J39366_1000188
373 JGI25154J39366_1000256
374 JGI25154J39366_1000292
375 JGI25154J39366_1002194
376 JGI25157J39369_1000206
377 JGI25157J39369_1000233
378 JGI25164J39214_1002658
379 JGI25151J46595_10001099
380 JGI25151J46595_10001952
381 JGI25151J46595_10018255
382 JGI25165J46597_1000001
383 rootL2_10043287
384 Ga0055538_1000001
385 Ga0055538_1000002
386 Ga0055538_1000054
387 Ga0055539_1000001
388 Ga0055539_1000002
389 Ga0055539_1000066
390 Ga0055533_1000003
391 Ga0055533_1000004
392 Ga0055533_1000076
393 Ga0055532_1000016
394 Ga0055532_1000097
395 Ga0055525_1000002
396 Ga0055525_1000003
397 Ga0055525_1000098
398 Ga0055535_1007861
399 Ga0055526_1009581
400 Ga0055524_1000413
401 Ga0055524_1018987
402 Ga0055536_1000061
403 Ga0055534_1002344
404 Ga0055541_1000001
405 Ga0055541_1000002
406 Ga0055541_1000056
407 Ga0070658_10208967
408 Ga0070676_10007710
409 Ga0070670_100168191
410 Ga0070670_100314153
411 Ga0070666_10173696
412 Ga0070682_100157928
413 Ga0070668_100322381
414 Ga0070671_100140029
415 Ga0070674_100160453
416 Ga0070667_100008559
417 Ga0070678_100000697
418 Ga0070681_10001273
419 Ga0068853_100093052
420 Ga0068853_100336278
421 Ga0070672_100152128
422 Ga0070672_100485567
423 Ga0070665_100651644
424 Ga0068855_100000115
425 Ga0068855_100113554
426 Ga0068854_100059884
427 Ga0068856_100069837
428 Ga0068852_100104719
429 Ga0068864_100196149
430 Ga0068858_100007150
431 Ga0068858_100042652
432 Ga0105251_10003625
433 Ga0105251_10017214
434 Ga0105244_10002354
435 Ga0105240_10009752
436 Ga0105247_10140769
437 Ga0105248_10481625
438 Ga0105237_10007117
439 Ga0105238_10005814
440 Ga0105238_10128491
441 Ga0157370_10005452
442 Ga0157374_10000385
443 Ga0157378_10285852
444 Ga0163163_10016741
445 Ga0182008_10000357
446 Ga0182008_10064745
447 Ga0157379_10008059
448 Ga0157376_10015463
449 Ga0182006_1000002
450 Ga0182006_1001697
451 Ga0182006_1010057
452 Ga0182006_1017627
453 Ga0182007_10000162
454 Ga0182007_10001622
455 Ga0182005_1000029
456 Ga0182005_1000525
457 Ga0163161_10041320
458 Ga0213872_10003816
459 Ga0213872_10004615
460 Ga0209435_100040
461 Ga0209435_100070
462 Ga0209435_100117
463 Ga0209784_100002
464 Ga0209784_100004
465 Ga0209566_100003
466 Ga0209566_100004
467 Ga0209674_100004
468 Ga0209674_100006
469 Ga0209147_100023
470 Ga0209147_100141
471 Ga0209563_100006
472 Ga0209563_100009
473 Ga0207427_100567
474 Ga0209437_100004
475 Ga0209437_100080
476 Ga0209437_100229
477 Ga0209258_100179
478 Ga0209258_100346
479 Ga0209646_1000033
480 Ga0209646_1000218
481 Ga0209646_1000270
482 Ga0209026_1000150
483 Ga0209026_1000534
484 Ga0209677_100003
485 Ga0209677_100005
486 Ga0209759_1000359
487 Ga0209759_1000408
488 Ga0209759_1000447
489 Ga0209233_1000005
490 Ga0209565_1000257
491 Ga0209455_1004118
492 Ga0209673_1021572
493 Ga0209675_1000385
494 Ga0209675_1003734
495 Ga0209676_1000183
496 Ga0209025_1000229
497 Ga0209025_1000723
498 Ga0209025_1003505
499 Ga0209025_1003948
500 Ga0209564_1000310
501 Ga0209564_1000505
502 Ga0209564_1000536
503 Ga0209758_1009167
504 Ga0209256_1000248
505 Ga0209256_1000746
506 Ga0209051_1009588
507 Ga0207655_1008972
508 Ga0207710_10082459
509 Ga0207680_10012720
510 Ga0207705_10056869
511 Ga0207695_10001772
512 Ga0207695_10005302
513 Ga0207695_10009601
514 Ga0207695_10030712
515 Ga0207694_10005631
516 Ga0207650_10149034
517 Ga0207669_10250110
518 Ga0207691_10013887
519 Ga0207667_10000025
520 Ga0207667_10000067
521 Ga0207667_10068794
522 Ga0207667_10114317
523 Ga0207640_10086601
524 Ga0207703_10017151
525 Ga0207703_10031795
526 Ga0207639_10075009
527 Ga0207702_10104315
528 Ga0207648_10091057
529 Ga0207683_10006579
530 Ga0207698_10005976
531 Ga0207698_10006589
532 Ga0268266_10059818
533 Ga0265316_10022278
534 Ga0307408_100044999
535 Ga0307405_10208978
536 Ga0307413_10033888
537 Ga0307413_10338767
538 Ga0307414_10032451
539 Ga0395901_0224627
540 Ga0436361_0200296
541 Ga0436361_0326827
542 Ga0436361_1043985
543 Ga0453684_0000014
544 Ga0466957_0029030
545 Ga0466967_0429504
546 Ga0495590_0000101
547 Ga0495651_0003787
548 Ga0495653_0000001
549 Ga0495653_0001109
550 Ga0495650_0000131
551 Ga0495605_0003550
552 Ga0495605_0003834
553 Ga0495585_0025990
554 Ga0495585_0116795
555 Ga0495596_0000723
556 Ga0495596_0004856
557 Ga0495607_0003026
558 Ga0495607_0003697
559 Ga0495583_0000141
560 Ga0495606_0010853
561 Ga0495606_0053033
562 Ga0495608_0006903
563 Ga0495608_0175261
564 Ga0495610_0001151
565 Ga0495610_0006407
566 Ga0495616_0022665
567 Ga0495616_0029803
568 Ga0495628_0003023
569 Ga0495628_0010092
570 Ga0495631_0005812
571 Ga0495631_0073226
572 Ga0495643_0008885
573 Ga0495644_0011848
574 Ga0495644_0017970
575 Ga0495648_0000264
576 Ga0495648_0000510
577 Ga0495648_0001026
578 Ga0495642_0025277
579 Ga0495652_0027444
580 Ga0495654_0070866
581 Ga0495609_0045065
582 Ga0495597_0028693
583 Ga0495597_0031554
584 Ga0495622_0025071
585 Ga0495622_0029771
586 Ga0495633_0003683
587 Ga0495633_0016185
588 Ga0495668_0085994
589 Ga0495625_0001004
590 Ga0495625_0001713
591 Ga0495625_0028726
592 Ga0495661_0005012
593 Ga0495588_0004651
594 Ga0495588_0042398
595 Ga0495588_0044439
596 Ga0495657_0120209
597 Ga0495599_0001025
598 Ga0495623_0067601
599 Ga0495646_0006783
600 Ga0495646_0022406
601 Ga0495669_0019483
602 Ga0495624_0030236
603 Ga0495624_0094379
604 Ga0495670_0000765
605 Ga0495670_0202128
606 Ga0495671_0000370
607 Ga0495649_0000004
608 Ga0495649_0000005
609 Ga0495649_0002284
610 Ga0495589_0004449
611 Ga0495600_0022011
612 Ga0495581_0083948
613 Ga0495604_0002071
614 Ga0495672_0000007
615 Ga0495672_0000017
616 Ga0495672_0077634
617 Ga0495683_0000752
618 Ga0495687_009462
619 Ga0495687_027233
620 Ga0495677_0025217
621 Ga0495679_003740
622 Ga0495673_0000239
623 Ga0495673_0028192
624 Ga0495673_0038957
625 Ga0495673_0070889
626 Ga0495681_0070375
627 Ga0495686_0003175
628 Ga0495602_0051818
629 Ga0495614_0051898
630 Ga0495626_0020368
631 Ga0495626_0040347
632 Ga0496101_0034457
633 Ga0496111_0027080
634 Ga0496114_0013290
635 Ga0496114_0015799
636 Ga0496115_0046550
637 Ga0496115_0356240
638 Ga0496116_0003240
639 Ga0496116_0005331
640 Ga0496116_0005458
641 Ga0496116_0029437
642 Ga0496116_0033310
643 Ga0496117_0000001
644 Ga0496118_0000008
645 Ga0496121_0009467
646 Ga0496121_0037215
647 Ga0496121_0047593
648 Ga0496122_0000455
649 Ga0496122_0000892
650 Ga0496122_0006027
651 Ga0496123_0000197
652 Ga0496123_0000842
653 Ga0496123_0005378
654 Ga0496123_0023883
655 Ga0496124_0072402
656 Ga0496124_0076014
657 Ga0496125_0000356
658 Ga0496125_0003177
659 Ga0496125_0004893
660 Ga0496126_0361382
661 Ga0495682_0000002
662 Ga0495682_0000036
663 Ga0495682_0008033
664 Ga0501034_0000260
665 Ga0501036_0289848
666 Ga0501040_0079314
667 Ga0501076_0144053
668 Ga0501249_002684
669 Ga0501269_000195
670 Ga0495601_0003885
671 Ga0500618_000756
672 Ga0500573_0200700
673 Ga0500619_000640
674 2511251407
675 2511384983
676 2513956997
677 2514043161
678 2521557922
679 2547374540
680 2550693840
681 2550693963
682 2553003048
683 2601670757
684 2765568613
685 2765569045
686 2808984450
687 2809131176
688 2809150489
689 2819540745
690 2819591209
691 2819595115
692 2819614934
693 2834643866
694 2839096069
695 2839096506
696 2843692060
697 2846034613
698 2846038795
699 2852622003
700 2857552652
701 2857565316
702 2884815760
703 2884816691
704 2884836818
705 2884836938
706 2884853109
707 2884853229
708 2885085689
709 2896155653
710 2896155773
711 2904426623
712 2904441308
713 2904531752
714 2904588023
715 2904589817
716 2904602797
717 2919046386
718 2919079699
719 2923511161
720 2928131101
721 2932414968
722 2932419654
723 644749386
724 8003404822

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01435

Peptidase_M48

Peptidase family M48

110

324

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cqb-assembly1.cif.gz_A crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633 0.9557 71 152
3cqb-assembly1.cif.gz_B crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633 0.9384 64 151
3cqb-assembly1.cif.gz_B crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633 0.814 64 151
3cqb-assembly1.cif.gz_A crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633 0.7481 71 152
6bh8-assembly2.cif.gz_B crystal structure of zmpste24 in complex with phosphoramidon 0.6945 55 288
ID Description Score Start End Superfamily
af_P23894_64_157_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9978 71 161 3.30.2010.10
af_P23894_64_157_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9557 71 161 3.30.2010.10
af_P9WHS5_62_152_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.8903 75 156 3.30.2010.10
af_Q59076_58_147_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.8562 75 160 3.30.2010.10
af_P95164_109_202_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.8334 102 156 3.30.2010.10
ID Description Score Start End GO Terms
AF-A0A3D2D9Z2-F1-model_v4 deleted 0.9449 73 255
AF-A0A3D2D9Z2-F1-model_v4 deleted 0.9349 73 255
AF-A0A2M7C416-F1-model_v4 Protease HtpX 0.934 52 291 GO:0004222
GO:0005886
GO:0006508
GO:0046872
AF-A0A509CQ29-F1-model_v4 deleted 0.9321 86 258
AF-A0A2N0ZYZ2-F1-model_v4 Protease HtpX 0.9308 93 289 GO:0004222
GO:0005886
GO:0006508
GO:0046872

Map