F424442

General Info

Members Datasets Scaffolds Average Seq Length
367 215 734 321

Family's Representative Sequence

Representative Sequence 3300046453|Ga0495627_001467|Ga0495627_001467_2842_3807
Length 321
Sequence MQRLFLQEVATRDGFQNEARFIETADKIAMIDALSQCGFAKIEVTSFTSPKAITALRDAEAVMHGIRRNPAVEYTVLVPNVRGAERALACNIDEANLVMSVSEPHNRSNLRMSREQSFAQLREVFSVIGAKGPVAINVSLSTVFGCPMQGDVPVGEVLHWVERFAELGARGVTLCDTTGMAYPSQVEALSRAVRERFPALQLTLHFHNTRGMALANALAAIDAGVDRFDSSLGGLGGCPYAPGASGNVCTEDLLHMLQLMGFSTGVDLDRVLAVARQLPGLIGHEIPSQVLKAGKRLDLHPIPAHVASLEKQVANTLELRP

Samples

Sample ID Description Type Environment
1 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
2 2124908027 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v1 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
5 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
6 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
12 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
26 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
27 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
28 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
41 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
42 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
50 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
72 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
84 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
85 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
86 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
87 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
88 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
89 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
90 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044668 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3E2 Metagenome Unclassified
95 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
96 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
97 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
98 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
102 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
105 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
106 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
109 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
110 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
111 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
112 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
113 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
114 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
115 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
116 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
117 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
118 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
121 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
122 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
123 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
124 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
137 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
138 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
141 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
142 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
143 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
144 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
145 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
146 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
149 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
150 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
158 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
159 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
164 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
165 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
168 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
169 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
175 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
176 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
177 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
178 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
179 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
180 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
181 2511231015 Pseudomonas sp. GM49 Isolate Nodule
182 2511231017 Pseudomonas sp. GM55 Isolate Nodule
183 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
184 2547132374 Acidovorax radicis N35 Isolate Unclassified
185 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
186 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
187 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
188 2643221570 Acidovorax sp. Root568 Isolate Unclassified
189 2643221596 Acidovorax sp. Root70 Isolate Unclassified
190 2643221611 Acidovorax sp. Root219 Isolate Unclassified
191 2643221652 Acidovorax sp. Root402 Isolate Unclassified
192 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
193 2721755523 Delftia sp. HK171 Isolate Unclassified
194 2738543012 Acidovorax sp. CF301 Isolate Unclassified
195 2738543015 Pseudomonas sp. GV041 Isolate Unclassified
196 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
197 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
198 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
199 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
200 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
201 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
202 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
203 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
204 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
205 2885198086 Variovorax sp. 679 Isolate Unclassified
206 2885211737 Variovorax sp. 553 Isolate Unclassified
207 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
208 2928163908 Burkholderia sp. 567 Isolate Unclassified
209 2931396565 Pseudomonas sp. DR48 Isolate Rhizosphere
210 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
211 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
212 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
213 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
214 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
215 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.56
Metatranscriptomes 0.27
Isolates 11.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.63
Nodule 1.09
Rhizoplane 3.81
Rhizosphere 72.48
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495627_001467 3300046453 Bacteria 13747
2 MRS2a_Contig_127 2124908027 Bacteria 16503
3 MRS2a_Contig_9668 2124908027 Bacteria 1729
4 JGI24735J21928_10002372 3300002067 Bacteria 6558
5 Ga0055532_1000190 3300003758 Bacteria 51412
6 Ga0055532_1000529 3300003758 Bacteria 16669
7 Ga0055527_1000291 3300003760 Bacteria 29060
8 Ga0055535_1000506 3300003761 Bacteria 34557
9 Ga0055542_1000502 3300003762 Bacteria 35790
10 Ga0055529_1000495 3300003763 Bacteria 35799
11 Ga0065714_10000930 3300005288 Bacteria 2189
12 Ga0065704_10136320 3300005289 Bacteria 1567
13 Ga0065712_10012187 3300005290 Bacteria 3170
14 Ga0065715_10130471 3300005293 Bacteria 2026
15 Ga0070658_10057021 3300005327 Bacteria 3177
16 Ga0070660_100001233 3300005339 Bacteria 17366
17 Ga0070669_100033880 3300005353 Bacteria 3696
18 Ga0070675_100035854 3300005354 Bacteria 4034
19 Ga0070659_100000055 3300005366 Bacteria 88573
20 Ga0068853_100098234 3300005539 Bacteria 2585
21 Ga0070672_100408051 3300005543 Bacteria 1165
22 Ga0068855_100146546 3300005563 Bacteria 2687
23 Ga0068852_100013927 3300005616 Bacteria 6168
24 Ga0081539_10016192 3300005985 Bacteria 5348
25 Ga0075432_10007080 3300006058 Bacteria 3820
26 Ga0075362_10005546 3300006177 Bacteria 4629
27 Ga0079104_1000004 3300006946 Bacteria 444549
28 Ga0105251_10000066 3300009011 Bacteria 99856
29 Ga0105251_10012171 3300009011 Bacteria 4881
30 Ga0105244_10045536 3300009036 Bacteria 2256
31 Ga0105250_10000033 3300009092 Bacteria 157956
32 Ga0105250_10068026 3300009092 Bacteria 1437
33 Ga0105250_10078413 3300009092 Bacteria 1338
34 Ga0105240_10000229 3300009093 Bacteria 111182
35 Ga0105240_10005075 3300009093 Bacteria 19737
36 Ga0105240_10023042 3300009093 Bacteria 8247
37 Ga0114129_10030738 3300009147 Bacteria 7595
38 Ga0105243_10000547 3300009148 Bacteria 37977
39 Ga0105243_10178982 3300009148 Bacteria 1842
40 Ga0105248_10322547 3300009177 Bacteria 1740
41 Ga0105248_10562741 3300009177 Bacteria 1286
42 Ga0105237_10097776 3300009545 Bacteria 2926
43 Ga0105239_10000839 3300010375 Bacteria 43658
44 Ga0105239_10007284 3300010375 Bacteria 12699
45 Ga0105246_10110028 3300011119 Bacteria 2022
46 Ga0157371_10189382 3300013102 Bacteria 1473
47 Ga0157370_10070692 3300013104 Bacteria 3294
48 Ga0157369_10000268 3300013105 Bacteria 70336
49 Ga0157375_10147339 3300013308 Bacteria 2486
50 Ga0182008_10000089 3300014497 Bacteria 69969
51 Ga0182008_10007326 3300014497 Bacteria 6101
52 Ga0182008_10123095 3300014497 Bacteria 1289
53 Ga0182006_1007583 3300015261 Bacteria 4959
54 Ga0182006_1077464 3300015261 Bacteria 1219
55 Ga0182005_1003309 3300015265 Bacteria 5505
56 Ga0163161_10044607 3300017792 Bacteria 3194
57 Ga0206354_10424944 3300020081 Bacteria 1772
58 Ga0209672_100080 3300025228 Bacteria 143481
59 Ga0209147_100071 3300025229 Bacteria 215861
60 Ga0209147_100091 3300025229 Bacteria 168353
61 Ga0209258_100082 3300025242 Bacteria 247739
62 Ga0209148_1000195 3300025254 Bacteria 109654
63 Ga0209759_1004919 3300025256 Bacteria 4836
64 Ga0209565_1006597 3300025263 Bacteria 3234
65 Ga0209455_1000172 3300025272 Bacteria 109654
66 Ga0209673_1000076 3300025273 Bacteria 230907
67 Ga0207696_1032074 3300025711 Bacteria 1584
68 Ga0207696_1042651 3300025711 Bacteria 1321
69 Ga0207655_1006992 3300025728 Bacteria 7392
70 Ga0207713_1000724 3300025735 Bacteria 30902
71 Ga0207713_1021020 3300025735 Bacteria 3139
72 Ga0207647_10001075 3300025904 Bacteria 21061
73 Ga0207695_10000268 3300025913 Bacteria 130752
74 Ga0207695_10020055 3300025913 Bacteria 7672
75 Ga0207695_10048688 3300025913 Bacteria 4474
76 Ga0207671_10028223 3300025914 Bacteria 4195
77 Ga0207657_10000087 3300025919 Bacteria 88335
78 Ga0207649_10149277 3300025920 Bacteria 1608
79 Ga0207694_10075553 3300025924 Bacteria 2637
80 Ga0207690_10000071 3300025932 Bacteria 88665
81 Ga0207709_10000019 3300025935 Bacteria 402225
82 Ga0207709_10289318 3300025935 Bacteria 1214
83 Ga0207691_10065039 3300025940 Bacteria 3302
84 Ga0207711_10216637 3300025941 Bacteria 1750
85 Ga0207667_10058539 3300025949 Bacteria 4040
86 Ga0207639_10074372 3300026041 Bacteria 2668
87 Ga0207678_10104432 3300026067 Bacteria 2418
88 Ga0207708_10332403 3300026075 Bacteria 1242
89 Ga0207698_10009359 3300026142 Bacteria 6244
90 Ga0209281_1000005 3300027111 Bacteria 1242284
91 Ga0209371_1000713 3300027312 Bacteria 28089
92 Ga0207428_10001135 3300027907 Bacteria 28911
93 Ga0265338_10000708 3300028800 Bacteria 56942
94 Ga0268256_1000608 3300030500 Bacteria 28089
95 Ga0307405_10030210 3300031731 Bacteria 3175
96 Ga0307406_10002603 3300031901 Bacteria 9832
97 Ga0307412_10013271 3300031911 Bacteria 4824
98 Ga0395899_0016095 3300037312 Bacteria 5701
99 Ga0395900_0000015 3300037418 Bacteria 384313
100 Ga0395900_0028321 3300037418 Bacteria 5737
101 Ga0395898_0000346 3300037466 Bacteria 104661
102 Ga0395898_0011051 3300037466 Bacteria 9405
103 Ga0395898_0037403 3300037466 Bacteria 4814
104 Ga0395901_0000121 3300038443 Bacteria 100690
105 Ga0395901_0000769 3300038443 Bacteria 35972
106 Ga0395901_0097729 3300038443 Bacteria 3078
107 Ga0439438_006409 3300041405 Bacteria 4156
108 Ga0439447_009243 3300041407 Bacteria 3002
109 Ga0439466_0007941 3300041411 Bacteria 4002
110 Ga0439451_008704 3300042009 Bacteria 2056
111 Ga0439452_004263 3300042010 Bacteria 4833
112 Ga0439463_000427 3300042016 Bacteria 11745
113 Ga0450911_003909 3300042115 Bacteria 2527
114 Ga0450898_003121 3300042134 Bacteria 2360
115 Ga0451577_0174735 3300042876 Bacteria 1936
116 Ga0466969_0006727 3300044656 Bacteria 6112
117 Ga0466972_0014184 3300044658 Bacteria 3994
118 Ga0466980_0064119 3300044668 Bacteria 2566
119 Ga0453683_0086945 3300044673 Bacteria 1959
120 Ga0495617_002668 3300046452 Bacteria 6942
121 Ga0495617_023305 3300046452 Bacteria 2091
122 Ga0495590_0006547 3300046457 Bacteria 4541
123 Ga0495590_0016766 3300046457 Bacteria 2643
124 Ga0495590_0037151 3300046457 Bacteria 1699
125 Ga0495591_000224 3300046458 Bacteria 56456
126 Ga0495591_001621 3300046458 Bacteria 13604
127 Ga0495638_0055622 3300046460 Bacteria 2457
128 Ga0495580_0004305 3300046472 Bacteria 11969
129 Ga0495580_0014143 3300046472 Bacteria 6065
130 Ga0495605_0000470 3300046474 Bacteria 35866
131 Ga0495605_0002522 3300046474 Bacteria 11299
132 Ga0495605_0003778 3300046474 Bacteria 8983
133 Ga0495605_0047564 3300046474 Bacteria 2103
134 Ga0495605_0095402 3300046474 Bacteria 1373
135 Ga0495584_0000686 3300046491 Bacteria 22477
136 Ga0495584_0001410 3300046491 Bacteria 14471
137 Ga0495584_0072186 3300046491 Bacteria 1734
138 Ga0495585_0000282 3300046492 Bacteria 50936
139 Ga0495585_0004671 3300046492 Bacteria 8828
140 Ga0495596_0000835 3300046500 Bacteria 18636
141 Ga0495607_0000047 3300046501 Bacteria 121696
142 Ga0495607_0002943 3300046501 Bacteria 13398
143 Ga0495607_0005502 3300046501 Bacteria 9045
144 Ga0495607_0007690 3300046501 Bacteria 7428
145 Ga0495607_0008631 3300046501 Bacteria 6949
146 Ga0495607_0009093 3300046501 Bacteria 6753
147 Ga0495583_0000008 3300046506 Bacteria 411092
148 Ga0495583_0000045 3300046506 Bacteria 220503
149 Ga0495583_0000206 3300046506 Bacteria 99380
150 Ga0495583_0000281 3300046506 Bacteria 82123
151 Ga0495583_0004924 3300046506 Bacteria 9285
152 Ga0495583_0006736 3300046506 Bacteria 7433
153 Ga0495606_0000360 3300046507 Bacteria 77832
154 Ga0495606_0001429 3300046507 Bacteria 32047
155 Ga0495606_0011489 3300046507 Bacteria 7218
156 Ga0495610_0011451 3300046512 Bacteria 5421
157 Ga0495610_0015787 3300046512 Bacteria 4374
158 Ga0495616_0000456 3300046513 Bacteria 31180
159 Ga0495616_0002483 3300046513 Bacteria 12208
160 Ga0495616_0008459 3300046513 Bacteria 6096
161 Ga0495620_0012381 3300046515 Bacteria 4410
162 Ga0495631_0016887 3300046518 Bacteria 3465
163 Ga0495632_0000037 3300046519 Bacteria 158699
164 Ga0495632_0001836 3300046519 Bacteria 17116
165 Ga0495632_0002620 3300046519 Bacteria 13548
166 Ga0495637_0001050 3300046520 Bacteria 17305
167 Ga0495643_0003881 3300046522 Bacteria 10742
168 Ga0495643_0005109 3300046522 Bacteria 8974
169 Ga0495643_0086591 3300046522 Bacteria 1622
170 Ga0495643_0159248 3300046522 Bacteria 1112
171 Ga0495644_0000054 3300046523 Bacteria 55331
172 Ga0495644_0096463 3300046523 Bacteria 1117
173 Ga0495648_0001650 3300046524 Bacteria 21659
174 Ga0495666_0061527 3300046526 Bacteria 1793
175 Ga0495642_0001123 3300046528 Bacteria 12315
176 Ga0495642_0017500 3300046528 Bacteria 2800
177 Ga0495652_0105579 3300046529 Bacteria 2276
178 Ga0495654_0000112 3300046530 Bacteria 92528
179 Ga0495654_0078951 3300046530 Bacteria 1547
180 Ga0495665_0096088 3300046531 Bacteria 1556
181 Ga0495665_0181928 3300046531 Bacteria 1092
182 Ga0495609_0000107 3300046538 Bacteria 97734
183 Ga0495609_0000157 3300046538 Bacteria 70102
184 Ga0495609_0000552 3300046538 Bacteria 29569
185 Ga0495609_0000681 3300046538 Bacteria 26243
186 Ga0495609_0005556 3300046538 Bacteria 6583
187 Ga0495621_0001548 3300046539 Bacteria 5990
188 Ga0495621_0040575 3300046539 Bacteria 1632
189 Ga0495597_0004447 3300046542 Bacteria 7701
190 Ga0495622_0060735 3300046557 Bacteria 1750
191 Ga0495656_0000900 3300046615 Bacteria 9618
192 Ga0495656_0001551 3300046615 Bacteria 7510
193 Ga0495668_0036502 3300046616 Bacteria 2753
194 Ga0495611_0002446 3300046648 Bacteria 8484
195 Ga0495611_0002453 3300046648 Bacteria 8465
196 Ga0495611_0088397 3300046648 Bacteria 1430
197 Ga0495625_0001919 3300046660 Bacteria 23507
198 Ga0495625_0002739 3300046660 Bacteria 18665
199 Ga0495625_0015881 3300046660 Bacteria 5942
200 Ga0495625_0044650 3300046660 Bacteria 3207
201 Ga0495659_0000002 3300046664 Bacteria 176698
202 Ga0495659_0000864 3300046664 Bacteria 10784
203 Ga0495659_0005499 3300046664 Bacteria 3986
204 Ga0495659_0009135 3300046664 Bacteria 3161
205 Ga0495661_0000006 3300046665 Bacteria 427288
206 Ga0495661_0000057 3300046665 Bacteria 135044
207 Ga0495661_0000154 3300046665 Bacteria 80795
208 Ga0495661_0005142 3300046665 Bacteria 9326
209 Ga0495661_0016364 3300046665 Bacteria 4918
210 Ga0495669_0060622 3300046684 Bacteria 1711
211 Ga0495670_0001337 3300046691 Bacteria 12033
212 Ga0495670_0023614 3300046691 Bacteria 3035
213 Ga0495670_0025097 3300046691 Bacteria 2948
214 Ga0495671_0001474 3300046692 Bacteria 15778
215 Ga0495649_0000106 3300046694 Bacteria 74615
216 Ga0495649_0000811 3300046694 Bacteria 25193
217 Ga0495649_0006189 3300046694 Bacteria 7472
218 Ga0495649_0186273 3300046694 Bacteria 1081
219 Ga0495589_0013424 3300046794 Bacteria 4227
220 Ga0495589_0058795 3300046794 Bacteria 1890
221 Ga0495660_0000868 3300046810 Bacteria 22348
222 Ga0495660_0020126 3300046810 Bacteria 3825
223 Ga0495660_0069611 3300046810 Bacteria 1870
224 Ga0495636_0000215 3300047318 Bacteria 22666
225 Ga0495636_0000825 3300047318 Bacteria 11427
226 Ga0495636_0061462 3300047318 Bacteria 1588
227 Ga0495674_0003028 3300047319 Bacteria 16365
228 Ga0495674_0041074 3300047319 Bacteria 4134
229 Ga0495674_0204692 3300047319 Bacteria 1636
230 Ga0495672_0000987 3300047320 Bacteria 29395
231 Ga0495672_0001300 3300047320 Bacteria 24899
232 Ga0495672_0008626 3300047320 Bacteria 7499
233 Ga0495672_0067308 3300047320 Bacteria 2040
234 Ga0495683_0001830 3300047323 Bacteria 13370
235 Ga0495683_0002983 3300047323 Bacteria 9991
236 Ga0495683_0006620 3300047323 Bacteria 6317
237 Ga0495683_0014523 3300047323 Bacteria 4103
238 Ga0495683_0034990 3300047323 Bacteria 2553
239 Ga0495683_0044587 3300047323 Bacteria 2230
240 Ga0495687_000343 3300047443 Bacteria 59599
241 Ga0495687_001473 3300047443 Bacteria 21559
242 Ga0495687_001864 3300047443 Bacteria 18327
243 Ga0495687_003928 3300047443 Bacteria 10415
244 Ga0495687_038507 3300047443 Bacteria 2121
245 Ga0495677_0001108 3300047445 Bacteria 10764
246 Ga0495677_0008533 3300047445 Bacteria 3804
247 Ga0495677_0010718 3300047445 Bacteria 3358
248 Ga0495685_000182 3300047447 Bacteria 20849
249 Ga0495673_0001831 3300047469 Bacteria 16045
250 Ga0495673_0010077 3300047469 Bacteria 5169
251 Ga0495681_0000695 3300047470 Bacteria 25705
252 Ga0495681_0006226 3300047470 Bacteria 7867
253 Ga0495681_0007514 3300047470 Bacteria 6945
254 Ga0495681_0022236 3300047470 Bacteria 3399
255 Ga0495686_0106672 3300047472 Bacteria 1684
256 Ga0495593_0014008 3300047673 Bacteria 4566
257 Ga0495614_0046630 3300048089 Bacteria 1858
258 Ga0495626_0000012 3300048091 Bacteria 258483
259 Ga0495626_0003714 3300048091 Bacteria 9645
260 Ga0495626_0006569 3300048091 Bacteria 6598
261 Ga0495626_0061041 3300048091 Bacteria 1716
262 Ga0495626_0063679 3300048091 Bacteria 1672
263 Ga0496102_0002302 3300048905 Bacteria 16319
264 Ga0496102_0297622 3300048905 Bacteria 1521
265 Ga0496103_0034143 3300048906 Bacteria 3110
266 Ga0496105_0104640 3300048908 Bacteria 2337
267 Ga0496106_0000140 3300048909 Bacteria 53893
268 Ga0496106_0156220 3300048909 Bacteria 1802
269 Ga0496107_0097440 3300048910 Bacteria 2153
270 Ga0496107_0263923 3300048910 Bacteria 1281
271 Ga0496110_0037400 3300048913 Bacteria 4219
272 Ga0496115_0029050 3300048918 Bacteria 4340
273 Ga0496116_0000231 3300048919 Bacteria 103493
274 Ga0496116_0011740 3300048919 Bacteria 7217
275 Ga0496116_0025531 3300048919 Bacteria 4342
276 Ga0496116_0079790 3300048919 Bacteria 2035
277 Ga0496117_0000460 3300048920 Bacteria 68039
278 Ga0496117_0002480 3300048920 Bacteria 23160
279 Ga0496117_0005335 3300048920 Bacteria 13552
280 Ga0496117_0080737 3300048920 Bacteria 2137
281 Ga0496118_0003562 3300048921 Bacteria 19427
282 Ga0496118_0006372 3300048921 Bacteria 13003
283 Ga0496118_0014116 3300048921 Bacteria 7494
284 Ga0496118_0047266 3300048921 Bacteria 3337
285 Ga0496118_0110176 3300048921 Bacteria 1830
286 Ga0496120_0024644 3300048923 Bacteria 3747
287 Ga0496121_0000153 3300048924 Bacteria 150635
288 Ga0496121_0001323 3300048924 Bacteria 42412
289 Ga0496121_0008909 3300048924 Bacteria 11651
290 Ga0496121_0020875 3300048924 Bacteria 6451
291 Ga0496121_0065624 3300048924 Bacteria 2952
292 Ga0496121_0066924 3300048924 Bacteria 2914
293 Ga0496121_0136778 3300048924 Bacteria 1824
294 Ga0496121_0141456 3300048924 Bacteria 1784
295 Ga0496122_0000186 3300048925 Bacteria 144012
296 Ga0496122_0002004 3300048925 Bacteria 30310
297 Ga0496122_0029519 3300048925 Bacteria 4624
298 Ga0496122_0090578 3300048925 Bacteria 2086
299 Ga0496123_0000162 3300048926 Bacteria 134316
300 Ga0496123_0022491 3300048926 Bacteria 4857
301 Ga0496124_0013054 3300048927 Bacteria 8136
302 Ga0496124_0164020 3300048927 Bacteria 1729
303 Ga0496124_0304161 3300048927 Bacteria 1150
304 Ga0496125_0000023 3300048928 Bacteria 449042
305 Ga0496125_0000233 3300048928 Bacteria 113820
306 Ga0496125_0001350 3300048928 Bacteria 36190
307 Ga0496125_0011517 3300048928 Bacteria 8836
308 Ga0496125_0020538 3300048928 Bacteria 6197
309 Ga0496125_0054922 3300048928 Bacteria 3251
310 Ga0496126_0000426 3300048929 Bacteria 84838
311 Ga0496126_0029499 3300048929 Bacteria 5212
312 Ga0496126_0051271 3300048929 Bacteria 3757
313 Ga0496126_0093062 3300048929 Bacteria 2647
314 Ga0496126_0238741 3300048929 Bacteria 1519
315 Ga0495678_000646 3300049459 Bacteria 32026
316 Ga0495678_002416 3300049459 Bacteria 12718
317 Ga0495678_038168 3300049459 Bacteria 1946
318 Ga0495682_0000496 3300049460 Bacteria 27218
319 Ga0495682_0000755 3300049460 Bacteria 20873
320 Ga0495682_0003020 3300049460 Bacteria 7649
321 Ga0495682_0031510 3300049460 Bacteria 1959
322 Ga0501034_0014521 3300049571 Bacteria 8110
323 Ga0501047_0252097 3300049581 Bacteria 1613
324 nmdc:mga03683_23539_c1 3300050489 Bacteria 2400
325 nmdc:mga05p37_47390_c1 3300050507 Bacteria 5285
326 Ga0500618_001214 3300053125 Bacteria 12186
327 2501076114 2501025501 Bacteria 7768574
328 2501085824 2501025502 Bacteria 9641094
329 2501411945 2501025504 Bacteria 8008976
330 2511088443 2510917013 Bacteria 9951648
331 2511100943 2510917014 Bacteria 8296963
332 2511107292 2510917015 Bacteria 7950052
333 2511318938 2511231015 Bacteria 6598026
334 2511333799 2511231017 Bacteria 6503007
335 2516020558 2515154189 Bacteria 9629850
336 2548498449 2547132374 Bacteria 5530232
337 2599746722 2599185240 Bacteria 7968121
338 2600208628 2599185355 Bacteria 7968906
339 2601624125 2600255283 Bacteria 6061572
340 2643867006 2643221570 Bacteria 5103772
341 2643992190 2643221596 Bacteria 5006805
342 2644075899 2643221611 Bacteria 6820941
343 2644294869 2643221652 Bacteria 5140275
344 2676744284 2675903129 Bacteria 7964495
345 2722884487 2721755523 Bacteria 6430384
346 2739247213 2738543012 Bacteria 7115078
347 2739256992 2738543015 Bacteria 6750701
348 2809034231 2808606395 Bacteria 6020352
349 2831270441 2831265667 Bacteria 7184833
350 2839143083 2839138175 Bacteria 6549354
351 2842721061 2842718218 Bacteria 4560148
352 2856294527 2856287931 Bacteria 7223934
353 2857367900 2857357740 Bacteria 9937880
354 2863424616 2863421361 Bacteria 7300805
355 2870071450 2870068957 Bacteria 8925310
356 2883089462 2883087390 Bacteria 9532701
357 2885199727 2885198086 Bacteria 7212419
358 2885213378 2885211737 Bacteria 7212420
359 2928160387 2928157003 Bacteria 7522202
360 2928170633 2928163908 Bacteria 7561269
361 2931401275 2931396565 Bacteria 7251677
362 2981996303 2981990288 Bacteria 7590678
363 642418205 641736154 Bacteria 7689995
364 8020941434 8020938398 Bacteria 7472757
365 8020957777 8020953355 Bacteria 7439080
366 8039104851 8039098773 Bacteria 6602928
367 8055228823 8055225921 Bacteria 3341787
368 Ga0495627_001467
369 MRS2a_Contig_127
370 MRS2a_Contig_9668
371 JGI24735J21928_10002372
372 Ga0055532_1000190
373 Ga0055532_1000529
374 Ga0055527_1000291
375 Ga0055535_1000506
376 Ga0055542_1000502
377 Ga0055529_1000495
378 Ga0065714_10000930
379 Ga0065704_10136320
380 Ga0065712_10012187
381 Ga0065715_10130471
382 Ga0070658_10057021
383 Ga0070660_100001233
384 Ga0070669_100033880
385 Ga0070675_100035854
386 Ga0070659_100000055
387 Ga0068853_100098234
388 Ga0070672_100408051
389 Ga0068855_100146546
390 Ga0068852_100013927
391 Ga0081539_10016192
392 Ga0075432_10007080
393 Ga0075362_10005546
394 Ga0079104_1000004
395 Ga0105251_10000066
396 Ga0105251_10012171
397 Ga0105244_10045536
398 Ga0105250_10000033
399 Ga0105250_10068026
400 Ga0105250_10078413
401 Ga0105240_10000229
402 Ga0105240_10005075
403 Ga0105240_10023042
404 Ga0114129_10030738
405 Ga0105243_10000547
406 Ga0105243_10178982
407 Ga0105248_10322547
408 Ga0105248_10562741
409 Ga0105237_10097776
410 Ga0105239_10000839
411 Ga0105239_10007284
412 Ga0105246_10110028
413 Ga0157371_10189382
414 Ga0157370_10070692
415 Ga0157369_10000268
416 Ga0157375_10147339
417 Ga0182008_10000089
418 Ga0182008_10007326
419 Ga0182008_10123095
420 Ga0182006_1007583
421 Ga0182006_1077464
422 Ga0182005_1003309
423 Ga0163161_10044607
424 Ga0206354_10424944
425 Ga0209672_100080
426 Ga0209147_100071
427 Ga0209147_100091
428 Ga0209258_100082
429 Ga0209148_1000195
430 Ga0209759_1004919
431 Ga0209565_1006597
432 Ga0209455_1000172
433 Ga0209673_1000076
434 Ga0207696_1032074
435 Ga0207696_1042651
436 Ga0207655_1006992
437 Ga0207713_1000724
438 Ga0207713_1021020
439 Ga0207647_10001075
440 Ga0207695_10000268
441 Ga0207695_10020055
442 Ga0207695_10048688
443 Ga0207671_10028223
444 Ga0207657_10000087
445 Ga0207649_10149277
446 Ga0207694_10075553
447 Ga0207690_10000071
448 Ga0207709_10000019
449 Ga0207709_10289318
450 Ga0207691_10065039
451 Ga0207711_10216637
452 Ga0207667_10058539
453 Ga0207639_10074372
454 Ga0207678_10104432
455 Ga0207708_10332403
456 Ga0207698_10009359
457 Ga0209281_1000005
458 Ga0209371_1000713
459 Ga0207428_10001135
460 Ga0265338_10000708
461 Ga0268256_1000608
462 Ga0307405_10030210
463 Ga0307406_10002603
464 Ga0307412_10013271
465 Ga0395899_0016095
466 Ga0395900_0000015
467 Ga0395900_0028321
468 Ga0395898_0000346
469 Ga0395898_0011051
470 Ga0395898_0037403
471 Ga0395901_0000121
472 Ga0395901_0000769
473 Ga0395901_0097729
474 Ga0439438_006409
475 Ga0439447_009243
476 Ga0439466_0007941
477 Ga0439451_008704
478 Ga0439452_004263
479 Ga0439463_000427
480 Ga0450911_003909
481 Ga0450898_003121
482 Ga0451577_0174735
483 Ga0466969_0006727
484 Ga0466972_0014184
485 Ga0466980_0064119
486 Ga0453683_0086945
487 Ga0495617_002668
488 Ga0495617_023305
489 Ga0495590_0006547
490 Ga0495590_0016766
491 Ga0495590_0037151
492 Ga0495591_000224
493 Ga0495591_001621
494 Ga0495638_0055622
495 Ga0495580_0004305
496 Ga0495580_0014143
497 Ga0495605_0000470
498 Ga0495605_0002522
499 Ga0495605_0003778
500 Ga0495605_0047564
501 Ga0495605_0095402
502 Ga0495584_0000686
503 Ga0495584_0001410
504 Ga0495584_0072186
505 Ga0495585_0000282
506 Ga0495585_0004671
507 Ga0495596_0000835
508 Ga0495607_0000047
509 Ga0495607_0002943
510 Ga0495607_0005502
511 Ga0495607_0007690
512 Ga0495607_0008631
513 Ga0495607_0009093
514 Ga0495583_0000008
515 Ga0495583_0000045
516 Ga0495583_0000206
517 Ga0495583_0000281
518 Ga0495583_0004924
519 Ga0495583_0006736
520 Ga0495606_0000360
521 Ga0495606_0001429
522 Ga0495606_0011489
523 Ga0495610_0011451
524 Ga0495610_0015787
525 Ga0495616_0000456
526 Ga0495616_0002483
527 Ga0495616_0008459
528 Ga0495620_0012381
529 Ga0495631_0016887
530 Ga0495632_0000037
531 Ga0495632_0001836
532 Ga0495632_0002620
533 Ga0495637_0001050
534 Ga0495643_0003881
535 Ga0495643_0005109
536 Ga0495643_0086591
537 Ga0495643_0159248
538 Ga0495644_0000054
539 Ga0495644_0096463
540 Ga0495648_0001650
541 Ga0495666_0061527
542 Ga0495642_0001123
543 Ga0495642_0017500
544 Ga0495652_0105579
545 Ga0495654_0000112
546 Ga0495654_0078951
547 Ga0495665_0096088
548 Ga0495665_0181928
549 Ga0495609_0000107
550 Ga0495609_0000157
551 Ga0495609_0000552
552 Ga0495609_0000681
553 Ga0495609_0005556
554 Ga0495621_0001548
555 Ga0495621_0040575
556 Ga0495597_0004447
557 Ga0495622_0060735
558 Ga0495656_0000900
559 Ga0495656_0001551
560 Ga0495668_0036502
561 Ga0495611_0002446
562 Ga0495611_0002453
563 Ga0495611_0088397
564 Ga0495625_0001919
565 Ga0495625_0002739
566 Ga0495625_0015881
567 Ga0495625_0044650
568 Ga0495659_0000002
569 Ga0495659_0000864
570 Ga0495659_0005499
571 Ga0495659_0009135
572 Ga0495661_0000006
573 Ga0495661_0000057
574 Ga0495661_0000154
575 Ga0495661_0005142
576 Ga0495661_0016364
577 Ga0495669_0060622
578 Ga0495670_0001337
579 Ga0495670_0023614
580 Ga0495670_0025097
581 Ga0495671_0001474
582 Ga0495649_0000106
583 Ga0495649_0000811
584 Ga0495649_0006189
585 Ga0495649_0186273
586 Ga0495589_0013424
587 Ga0495589_0058795
588 Ga0495660_0000868
589 Ga0495660_0020126
590 Ga0495660_0069611
591 Ga0495636_0000215
592 Ga0495636_0000825
593 Ga0495636_0061462
594 Ga0495674_0003028
595 Ga0495674_0041074
596 Ga0495674_0204692
597 Ga0495672_0000987
598 Ga0495672_0001300
599 Ga0495672_0008626
600 Ga0495672_0067308
601 Ga0495683_0001830
602 Ga0495683_0002983
603 Ga0495683_0006620
604 Ga0495683_0014523
605 Ga0495683_0034990
606 Ga0495683_0044587
607 Ga0495687_000343
608 Ga0495687_001473
609 Ga0495687_001864
610 Ga0495687_003928
611 Ga0495687_038507
612 Ga0495677_0001108
613 Ga0495677_0008533
614 Ga0495677_0010718
615 Ga0495685_000182
616 Ga0495673_0001831
617 Ga0495673_0010077
618 Ga0495681_0000695
619 Ga0495681_0006226
620 Ga0495681_0007514
621 Ga0495681_0022236
622 Ga0495686_0106672
623 Ga0495593_0014008
624 Ga0495614_0046630
625 Ga0495626_0000012
626 Ga0495626_0003714
627 Ga0495626_0006569
628 Ga0495626_0061041
629 Ga0495626_0063679
630 Ga0496102_0002302
631 Ga0496102_0297622
632 Ga0496103_0034143
633 Ga0496105_0104640
634 Ga0496106_0000140
635 Ga0496106_0156220
636 Ga0496107_0097440
637 Ga0496107_0263923
638 Ga0496110_0037400
639 Ga0496115_0029050
640 Ga0496116_0000231
641 Ga0496116_0011740
642 Ga0496116_0025531
643 Ga0496116_0079790
644 Ga0496117_0000460
645 Ga0496117_0002480
646 Ga0496117_0005335
647 Ga0496117_0080737
648 Ga0496118_0003562
649 Ga0496118_0006372
650 Ga0496118_0014116
651 Ga0496118_0047266
652 Ga0496118_0110176
653 Ga0496120_0024644
654 Ga0496121_0000153
655 Ga0496121_0001323
656 Ga0496121_0008909
657 Ga0496121_0020875
658 Ga0496121_0065624
659 Ga0496121_0066924
660 Ga0496121_0136778
661 Ga0496121_0141456
662 Ga0496122_0000186
663 Ga0496122_0002004
664 Ga0496122_0029519
665 Ga0496122_0090578
666 Ga0496123_0000162
667 Ga0496123_0022491
668 Ga0496124_0013054
669 Ga0496124_0164020
670 Ga0496124_0304161
671 Ga0496125_0000023
672 Ga0496125_0000233
673 Ga0496125_0001350
674 Ga0496125_0011517
675 Ga0496125_0020538
676 Ga0496125_0054922
677 Ga0496126_0000426
678 Ga0496126_0029499
679 Ga0496126_0051271
680 Ga0496126_0093062
681 Ga0496126_0238741
682 Ga0495678_000646
683 Ga0495678_002416
684 Ga0495678_038168
685 Ga0495682_0000496
686 Ga0495682_0000755
687 Ga0495682_0003020
688 Ga0495682_0031510
689 Ga0501034_0014521
690 Ga0501047_0252097
691 nmdc:mga03683_23539_c1
692 nmdc:mga05p37_47390_c1
693 Ga0500618_001214
694 2501076114
695 2501085824
696 2501411945
697 2511088443
698 2511100943
699 2511107292
700 2511318938
701 2511333799
702 2516020558
703 2548498449
704 2599746722
705 2600208628
706 2601624125
707 2643867006
708 2643992190
709 2644075899
710 2644294869
711 2676744284
712 2722884487
713 2739247213
714 2739256992
715 2809034231
716 2831270441
717 2839143083
718 2842721061
719 2856294527
720 2857367900
721 2863424616
722 2870071450
723 2883089462
724 2885199727
725 2885213378
726 2928160387
727 2928170633
728 2931401275
729 2981996303
730 642418205
731 8020941434
732 8020957777
733 8039104851
734 8055228823

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00682

HMGL-like

HMGL-like

3

278

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6nds-assembly1.cif.gz_A-2 structure of an hmg-coa lyase from acenitobacter baumannii in complex with coenzyme a and 3-methylmalate 0.959 5 304
3mp5-assembly3.cif.gz_E crystal structure of human lyase r41m in complex with hmg-coa 0.9571 2 294
1ydo-assembly1.cif.gz_A crystal structure of the bacillis subtilis hmg-coa lyase, northeast structural genomics target sr181. 0.9567 1 293
2cw6-assembly1.cif.gz_A crystal structure of human hmg-coa lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria 0.9563 2 294
3mp5-assembly2.cif.gz_C crystal structure of human lyase r41m in complex with hmg-coa 0.9563 2 295
ID Description Score Start End Superfamily
af_Q0JNR8_151_451_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9562 3 294 3.20.20.70
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9542 5 293 3.20.20.70
af_Q4DFZ0_10_135_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9419 6 124 3.20.20.70
af_Q4DIQ4_8_322_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9355 3 284 3.20.20.70
1ydoB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9257 5 293 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A5C7A604-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9923 4 198 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A2D7XC08-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9867 1 199 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A254PXD9-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9837 3 304 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-A0A0N8PSJ7-F1-model_v4 Hydroxymethylglutaryl-CoA lyase 0.9837 5 208 GO:0004419
GO:0006552
GO:0046872
GO:0046951
AF-Q3TPS7-F1-model_v4 hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.9804 6 141 GO:0004419
GO:0016020
GO:0046872

Map