F424730

General Info

Members Datasets Scaffolds Average Seq Length
368 245 275 561

Family's Representative Sequence

Representative Sequence 3300025940|Ga0207691_10009350|Ga0207691_100093502
Length 630
Sequence MKTERAENPRRPIRIPPPKMADGVASPDGTAEATKQNLEAQPHPSKKIDMNAAKQAGNGQGAEDQREGLDFVRRIVEEDNRTGKWGGRVATRFPPEPNGYLHIGHAKSIALNFGIAEEYGGECNLRYDDTNPAKEEEEYVKSIEEDVRWLGARPANILWASDYFDTMYEYAQDLIRKGLAYVDDQTAEQIRQSRGTLTAPGRESPFRNRTPAENLDLFDRMRKGEFPDGSKVLRAKIDMASPNLNLRDPVMYRILHESHHNTGDKWCVYPMYDWAHGFEDSLEKITHSICTLEFENHRPLYDWFIDAVNLNRAERDRIWHPQQIEFARLNLTYTMLSKRKLLQLVNEKTVSGWDDPRMPTISGFRRKGYTPESIRAFAKHIGVNKFNSTVDVGVLENFLREDLNKRAPRRMAVLRPLKVVITNYPEGQVDQLDAINNPEDPAAGTRKVPFGRVLYIEQDDFRETPPPKYFRLFPGNEVRLRYAYYVKCTAVVKDASGAITEIHCTYDPATRGGDSPDGRKVKSTIHWVAADSAADAEVRLYEHLFAKADPDDVPEGQDWRANLNPKSLEVISHAKLEPGLREVMAGEKFQFERLGYFAADPDSKPGRPVFNRAVSLKDTWAKEAQKGQQK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
3 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
4 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
5 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
6 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
7 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
8 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
9 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
10 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
11 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
12 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
13 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
14 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
15 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
16 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
17 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
18 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
19 2738543010 Bacillus sp. YR335 Isolate Unclassified
20 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
21 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
22 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
23 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
24 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
25 2818991441 Niallia circulans 3243 Isolate Rhizosphere
26 2818991459 Paenibacillus sp. 597 Isolate Unclassified
27 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
28 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
29 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
30 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
31 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
32 2857472729 Cohnella sp. R-74144 Isolate Unclassified
33 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
34 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
35 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
36 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
37 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
38 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
39 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
40 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
41 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
42 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
43 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
44 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
45 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
46 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
47 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
48 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
49 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
50 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
51 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
52 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
53 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
54 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
55 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
56 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
57 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
58 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
59 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
60 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
61 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
62 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
63 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
64 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
65 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
66 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
67 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
68 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
69 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
70 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
71 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
72 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
73 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
74 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
75 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
76 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
77 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
78 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
79 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
80 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
81 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
82 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
83 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
84 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
85 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
86 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
87 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
88 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
89 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
90 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
91 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
92 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
93 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
94 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
95 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
96 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
97 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
98 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
99 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
100 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
101 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
102 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
103 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
104 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
105 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
106 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
107 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
108 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
109 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
110 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
111 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
112 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
113 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
114 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
115 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
116 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
117 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
118 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
119 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
120 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
121 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
122 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
123 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
124 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
125 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
126 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
127 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
128 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
129 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
130 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
134 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
135 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
136 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
144 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
145 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
147 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
148 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
149 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
150 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
151 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
152 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
153 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
154 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
155 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
156 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
157 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
158 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
159 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
160 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
161 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
162 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
163 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
164 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
165 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
166 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
167 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
168 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
169 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
170 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
171 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
172 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
173 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
174 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
175 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
176 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
177 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
178 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
179 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
180 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
181 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
182 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
183 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
184 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
185 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
186 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
187 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
188 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
189 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
190 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
191 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
192 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
193 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
194 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
195 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
196 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
197 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
198 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
199 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
200 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
201 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
202 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
203 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
204 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
205 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
206 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
207 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
208 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
209 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
210 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
211 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
212 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
213 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
214 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
215 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
216 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
217 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
218 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
219 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
220 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
221 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
222 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
223 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
224 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
225 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
226 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
227 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
228 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
229 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
230 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
231 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
232 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
233 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
234 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
235 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
236 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
237 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
238 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
239 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
240 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
241 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
242 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
243 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
244 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
245 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 72.83
Metatranscriptomes 1.9
Isolates 25.27

Biome Distribution

Category Percentage (%)
Aerial Root 0.54
Bulb 0
Endosphere 3.53
Nodule 1.63
Rhizoplane 0.82
Rhizosphere 70.65
Stem 0
Stem Tuber 0
Unclassified 22.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_408518 2162886007 Bacteria 5643
2 JGI25406J46586_10005362 3300003203 Bacteria 5951
3 rootH2_10036929 3300003320 Bacteria 6859
4 Ga0006562J51391_1007253 3300003578 Bacteria 2200
5 Ga0055538_1000290 3300003751 Bacteria 25542
6 Ga0055532_1003845 3300003758 Bacteria 2423
7 Ga0065704_10070475 3300005289 Bacteria 23526
8 Ga0065715_10014078 3300005293 Bacteria 2455
9 Ga0065707_10000455 3300005295 Bacteria 78106
10 Ga0065707_10004165 3300005295 Bacteria 3591
11 Ga0065707_10082979 3300005295 Bacteria 11051
12 Ga0070680_100001468 3300005336 Bacteria 17110
13 Ga0070689_100121214 3300005340 Bacteria 2089
14 Ga0070689_100123374 3300005340 Bacteria 2071
15 Ga0070694_100020449 3300005444 Bacteria 4220
16 Ga0070698_100018351 3300005471 Bacteria 7367
17 Ga0070698_100030279 3300005471 Bacteria 5612
18 Ga0070698_100057157 3300005471 Bacteria 3949
19 Ga0070699_100007709 3300005518 Bacteria 9357
20 Ga0070696_100021344 3300005546 Bacteria 4390
21 Ga0070665_100000158 3300005548 Bacteria 124017
22 Ga0070665_100001468 3300005548 Bacteria 27608
23 Ga0068855_100002154 3300005563 Bacteria 24335
24 Ga0068855_100084642 3300005563 Bacteria 3671
25 Ga0068855_100115821 3300005563 Bacteria 3072
26 Ga0068856_100158270 3300005614 Bacteria 2275
27 Ga0068852_100002014 3300005616 Bacteria 13836
28 Ga0068859_100094020 3300005617 Bacteria 3049
29 Ga0081538_10019007 3300005981 Bacteria 5131
30 Ga0081540_1003480 3300005983 Bacteria 12421
31 Ga0081539_10014983 3300005985 Bacteria 5681
32 Ga0075427_10000991 3300006194 Bacteria 3522
33 Ga0075370_10012680 3300006353 Bacteria 4462
34 Ga0075428_100010104 3300006844 Bacteria 10484
35 Ga0075428_100112941 3300006844 Bacteria 2959
36 Ga0075431_100016016 3300006847 Bacteria 7608
37 Ga0075433_10028014 3300006852 Bacteria 4785
38 Ga0075433_10128176 3300006852 Unclassified 2254
39 Ga0075429_100092031 3300006880 Bacteria 2645
40 Ga0097620_100094012 3300006931 Bacteria 3049
41 Ga0079104_1000336 3300006946 Bacteria 57390
42 Ga0079104_1003564 3300006946 Bacteria 7156
43 Ga0105244_10027488 3300009036 Bacteria 3064
44 Ga0105240_10000662 3300009093 Bacteria 63312
45 Ga0111539_10100990 3300009094 Bacteria 3387
46 Ga0105245_10007559 3300009098 Bacteria 9523
47 Ga0114129_10004751 3300009147 Bacteria 19193
48 Ga0114129_10011022 3300009147 Bacteria 12879
49 Ga0114129_10034382 3300009147 Bacteria 7159
50 Ga0114129_10046680 3300009147 Bacteria 6087
51 Ga0105243_10164871 3300009148 Bacteria 1914
52 Ga0105237_10000113 3300009545 Bacteria 114034
53 Ga0105237_10008953 3300009545 Bacteria 10777
54 Ga0105249_10009261 3300009553 Bacteria 8610
55 Ga0105239_10000797 3300010375 Bacteria 44708
56 Ga0105246_10000518 3300011119 Bacteria 21045
57 Ga0105246_10072482 3300011119 Bacteria 2428
58 Ga0157373_10011037 3300013100 Bacteria 6654
59 Ga0157370_10000386 3300013104 Bacteria 55365
60 Ga0157369_10004366 3300013105 Bacteria 16691
61 Ga0157374_10000002 3300013296 Bacteria 1054226
62 Ga0157372_10019962 3300013307 Bacteria 7224
63 Ga0157372_10050025 3300013307 Bacteria 4650
64 Ga0209784_100190 3300025224 Bacteria 48824
65 Ga0209566_100046 3300025225 Bacteria 247053
66 Ga0209566_100112 3300025225 Bacteria 111585
67 Ga0209566_100184 3300025225 Bacteria 66408
68 Ga0209566_103386 3300025225 Bacteria 2471
69 Ga0209147_100099 3300025229 Bacteria 162754
70 Ga0209147_102461 3300025229 Bacteria 4581
71 Ga0209437_100473 3300025233 Bacteria 30599
72 Ga0209258_102055 3300025242 Bacteria 5723
73 Ga0209025_1003443 3300025294 Bacteria 14978
74 Ga0207660_10052437 3300025917 Bacteria 2904
75 Ga0207646_10129586 3300025922 Bacteria 2270
76 Ga0207659_10008025 3300025926 Bacteria 6532
77 Ga0207691_10009350 3300025940 Bacteria 9408
78 Ga0207712_10018473 3300025961 Bacteria 4542
79 Ga0207658_10058207 3300025986 Bacteria 2875
80 Ga0207674_10002081 3300026116 Bacteria 25367
81 Ga0209281_1000097 3300027111 Bacteria 227540
82 Ga0209281_1000865 3300027111 Bacteria 26484
83 Ga0207428_10000845 3300027907 Bacteria 34476
84 Ga0268266_10000296 3300028379 Bacteria 80995
85 Ga0268266_10001492 3300028379 Bacteria 27721
86 Ga0265319_1000124 3300028563 Bacteria 57503
87 Ga0265318_10000067 3300028577 Bacteria 101172
88 Ga0265318_10004201 3300028577 Bacteria 7030
89 Ga0265318_10004258 3300028577 Bacteria 6978
90 Ga0265338_10062883 3300028800 Bacteria 3241
91 Ga0268256_1003644 3300030500 Bacteria 6834
92 Ga0265330_10000024 3300031235 Bacteria 149068
93 Ga0265332_10000047 3300031238 Bacteria 113689
94 Ga0265328_10007263 3300031239 Bacteria 4630
95 Ga0265320_10000056 3300031240 Bacteria 107107
96 Ga0265320_10026500 3300031240 Bacteria 3032
97 Ga0265325_10015833 3300031241 Bacteria 4229
98 Ga0265329_10000347 3300031242 Bacteria 24351
99 Ga0265329_10004141 3300031242 Bacteria 6124
100 Ga0265340_10000141 3300031247 Bacteria 36357
101 Ga0265340_10001022 3300031247 Bacteria 15969
102 Ga0265340_10012260 3300031247 Bacteria 4528
103 Ga0265340_10013526 3300031247 Bacteria 4284
104 Ga0265340_10020076 3300031247 Bacteria 3438
105 Ga0265339_10002004 3300031249 Bacteria 14958
106 Ga0265339_10004188 3300031249 Bacteria 9893
107 Ga0265339_10006944 3300031249 Bacteria 7365
108 Ga0265331_10000284 3300031250 Bacteria 56219
109 Ga0265316_10000050 3300031344 Bacteria 127118
110 Ga0265316_10000077 3300031344 Bacteria 101598
111 Ga0265316_10000336 3300031344 Bacteria 52656
112 Ga0265316_10006230 3300031344 Bacteria 11433
113 Ga0307408_100027168 3300031548 Bacteria 3941
114 Ga0265313_10000003 3300031595 Bacteria 196723
115 Ga0265313_10000552 3300031595 Bacteria 39023
116 Ga0265313_10000554 3300031595 Bacteria 38970
117 Ga0316575_10006517 3300031665 Bacteria 4202
118 Ga0316575_10012324 3300031665 Bacteria 3179
119 Ga0316575_10019853 3300031665 Bacteria 2573
120 Ga0316579_10028749 3300031691 Bacteria 2532
121 Ga0316579_10044078 3300031691 Bacteria 2077
122 Ga0316579_10059394 3300031691 Bacteria 1797
123 Ga0265314_10000143 3300031711 Bacteria 107730
124 Ga0265314_10000148 3300031711 Bacteria 105207
125 Ga0265342_10000047 3300031712 Bacteria 130035
126 Ga0265342_10028934 3300031712 Bacteria 3444
127 Ga0265342_10037082 3300031712 Bacteria 2975
128 Ga0316576_10026575 3300031727 Bacteria 4063
129 Ga0316576_10039963 3300031727 Bacteria 3369
130 Ga0316578_10002031 3300031728 Bacteria 8625
131 Ga0307405_10025226 3300031731 Bacteria 3409
132 Ga0316577_10003093 3300031733 Bacteria 8358
133 Ga0316577_10003441 3300031733 Bacteria 7999
134 Ga0316577_10012028 3300031733 Bacteria 4704
135 Ga0316577_10019641 3300031733 Bacteria 3741
136 Ga0307407_10033706 3300031903 Bacteria 2796
137 Ga0307409_100025836 3300031995 Bacteria 4128
138 Ga0307409_100079193 3300031995 Bacteria 2647
139 Ga0307416_100067419 3300032002 Bacteria 2951
140 Ga0316583_10000579 3300032133 Bacteria 11087
141 Ga0316583_10000729 3300032133 Bacteria 10229
142 Ga0316585_10023577 3300032137 Bacteria 1899
143 Ga0316574_0000254 3300035398 Bacteria 19497
144 Ga0316574_0005773 3300035398 Bacteria 6636
145 Ga0373937_0006646 3300036401 Bacteria 9981
146 Ga0316582_0000469 3300036647 Bacteria 15041
147 Ga0316582_0004345 3300036647 Bacteria 7138
148 Ga0316582_0055747 3300036647 Bacteria 2520
149 Ga0316584_0002344 3300036712 Bacteria 11934
150 Ga0316584_0016262 3300036712 Bacteria 5333
151 Ga0316584_0106478 3300036712 Bacteria 2098
152 Ga0373925_0056675 3300037068 Bacteria 2936
153 Ga0316581_0002940 3300037588 Bacteria 4178
154 Ga0395901_0285285 3300038443 Bacteria 1715
155 Ga0400489_75158 3300039093 Bacteria 8674
156 Ga0436365_1033789 3300039437 Bacteria 5553
157 Ga0439436_0011557 3300041404 Bacteria 2682
158 Ga0439449_0018668 3300042007 Bacteria 2601
159 Ga0451577_0002977 3300042876 Bacteria 19376
160 Ga0451577_0006341 3300042876 Bacteria 11815
161 Ga0451577_0007483 3300042876 Bacteria 10725
162 Ga0451577_0024460 3300042876 Bacteria 5494
163 Ga0451577_0043648 3300042876 Bacteria 4016
164 Ga0466969_0007802 3300044656 Bacteria 5689
165 Ga0453683_0000080 3300044673 Bacteria 145649
166 Ga0453683_0001110 3300044673 Bacteria 24607
167 Ga0453683_0012324 3300044673 Bacteria 5605
168 Ga0453683_0020654 3300044673 Bacteria 4208
169 Ga0453683_0048141 3300044673 Bacteria 2674
170 Ga0466966_0044031 3300044684 Bacteria 2859
171 Ga0466961_0022971 3300044693 Bacteria 4012
172 Ga0466961_0055442 3300044693 Bacteria 2527
173 Ga0453684_0000007 3300044712 Bacteria 1301482
174 Ga0453684_0000044 3300044712 Bacteria 585643
175 Ga0453684_0000137 3300044712 Bacteria 323390
176 Ga0453684_0000415 3300044712 Bacteria 174067
177 Ga0453684_0000827 3300044712 Bacteria 104649
178 Ga0453684_0002346 3300044712 Bacteria 46306
179 Ga0453684_0003715 3300044712 Bacteria 33778
180 Ga0453684_0010279 3300044712 Bacteria 16027
181 Ga0453684_0013587 3300044712 Bacteria 13199
182 Ga0453684_0017913 3300044712 Bacteria 10927
183 Ga0453684_0021878 3300044712 Bacteria 9517
184 Ga0453684_0067802 3300044712 Bacteria 4535
185 Ga0453684_0081527 3300044712 Bacteria 4035
186 Ga0453684_0085110 3300044712 Bacteria 3930
187 Ga0453684_0087369 3300044712 Bacteria 3864
188 Ga0453684_0141262 3300044712 Bacteria 2875
189 Ga0453684_0168791 3300044712 Bacteria 2581
190 Ga0466959_0019934 3300045049 Bacteria 4937
191 Ga0466959_0025046 3300045049 Bacteria 4420
192 Ga0451576_0000058 3300045051 Bacteria 298769
193 Ga0451576_0000168 3300045051 Bacteria 165624
194 Ga0451576_0008049 3300045051 Bacteria 12439
195 Ga0451576_0009393 3300045051 Bacteria 11339
196 Ga0451576_0017215 3300045051 Bacteria 7950
197 Ga0495629_0045407 3300046459 Bacteria 3082
198 Ga0495630_0000361 3300046517 Bacteria 36008
199 Ga0495630_0092840 3300046517 Bacteria 2281
200 Ga0495624_0020558 3300046690 Bacteria 4390
201 Ga0495680_0126604 3300047322 Bacteria 1881
202 Ga0495684_0005763 3300047471 Bacteria 9635
203 Ga0495684_0022555 3300047471 Bacteria 4841
204 Ga0496110_0000899 3300048913 Bacteria 20905
205 Ga0496112_0066597 3300048915 Bacteria 3554
206 Ga0496116_0002261 3300048919 Bacteria 20422
207 Ga0496116_0003750 3300048919 Bacteria 14857
208 Ga0496116_0006890 3300048919 Bacteria 10203
209 Ga0496116_0008535 3300048919 Bacteria 8875
210 Ga0496116_0016478 3300048919 Bacteria 5779
211 Ga0496116_0083707 3300048919 Bacteria 1968
212 Ga0496117_0000097 3300048920 Bacteria 196340
213 Ga0496117_0014733 3300048920 Bacteria 6713
214 Ga0496118_0023628 3300048921 Bacteria 5332
215 Ga0496119_0000014 3300048922 Bacteria 313816
216 Ga0496119_0004957 3300048922 Bacteria 13015
217 Ga0496119_0014126 3300048922 Bacteria 6277
218 Ga0496119_0039767 3300048922 Bacteria 3019
219 Ga0496120_0000007 3300048923 Bacteria 436796
220 Ga0496120_0000023 3300048923 Bacteria 240991
221 Ga0496120_0000914 3300048923 Bacteria 41060
222 Ga0496120_0002012 3300048923 Bacteria 22123
223 Ga0496120_0010613 3300048923 Bacteria 6405
224 Ga0496121_0113337 3300048924 Bacteria 2063
225 Ga0496122_0000014 3300048925 Bacteria 491410
226 Ga0496122_0000101 3300048925 Bacteria 197550
227 Ga0496122_0018971 3300048925 Bacteria 6311
228 Ga0496122_0024725 3300048925 Bacteria 5247
229 Ga0496122_0032699 3300048925 Bacteria 4295
230 Ga0496122_0046588 3300048925 Bacteria 3356
231 Ga0496123_0004848 3300048926 Bacteria 13854
232 Ga0496123_0005200 3300048926 Bacteria 13227
233 Ga0496123_0024099 3300048926 Bacteria 4636
234 Ga0496124_0000721 3300048927 Bacteria 54189
235 Ga0496124_0000957 3300048927 Bacteria 46053
236 Ga0496125_0000067 3300048928 Bacteria 248871
237 Ga0496125_0002200 3300048928 Bacteria 26013
238 Ga0496125_0003295 3300048928 Bacteria 19806
239 Ga0496125_0031895 3300048928 Bacteria 4688
240 Ga0496126_0000019 3300048929 Bacteria 564723
241 Ga0496126_0000108 3300048929 Bacteria 197529
242 Ga0496126_0000764 3300048929 Bacteria 58209
243 Ga0496126_0001881 3300048929 Bacteria 30513
244 Ga0496126_0002094 3300048929 Bacteria 27942
245 Ga0496126_0006104 3300048929 Bacteria 13508
246 Ga0501343_000971 3300049132 Bacteria 1857
247 Ga0501305_000618 3300049161 Bacteria 3015
248 Ga0501312_004335 3300049528 Bacteria 1667
249 Ga0501316_001265 3300049532 Bacteria 2104
250 Ga0501317_002258 3300049533 Bacteria 1797
251 Ga0501335_000223 3300049551 Bacteria 3177
252 Ga0501038_0020179 3300049574 Bacteria 5996
253 Ga0501040_0022704 3300049576 Bacteria 4203
254 Ga0501072_0056910 3300049588 Bacteria 3081
255 Ga0501075_0017591 3300049591 Bacteria 5163
256 Ga0501075_0024382 3300049591 Bacteria 4435
257 Ga0501076_0034797 3300049592 Bacteria 3940
258 Ga0501217_005454 3300049661 Bacteria 2661
259 Ga0501079_0021119 3300049741 Bacteria 4977
260 Ga0501081_0066949 3300049743 Bacteria 2498
261 Ga0501081_0123966 3300049743 Bacteria 1842
262 Ga0501045_0037438 3300049824 Bacteria 3526
263 Ga0501212_001400 3300049851 Bacteria 2706
264 nmdc:mga05p37_14462_c1 3300050507 Bacteria 3668
265 nmdc:mga05p37_217_c1 3300050507 Bacteria 57809
266 nmdc:mga05p37_40349_c1 3300050507 Bacteria 5732
267 nmdc:mga05p37_93636_c1 3300050507 Bacteria 3702
268 nmdc:mga09592_116408_c1 3300050508 Bacteria 2294
269 nmdc:mga09592_34503_c1 3300050508 Bacteria 4230
270 nmdc:mga0n895_18531_c1 3300050512 Bacteria 6444
271 nmdc:mga08x19_35082_c1 3300050514 Bacteria 3173
272 nmdc:mga0a205_27009_c1 3300050515 Bacteria 5481
273 Ga0590074_002213 3300059423 Bacteria 3194
274 Ga0590075_003398 3300059424 Bacteria 3790
275 Ga0501082_0033358 3300060353 Bacteria 4442

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2571042143 2571532445 453
2 3300038443 Ga0395901_0285285 Ga0395901_0285285_47_1603 514
3 3300048925 Ga0496122_0018971 Ga0496122_0018971_870_2531 520
4 3300006946 Ga0079104_1000336 Ga0079104_100033625 521
5 3300027111 Ga0209281_1000097 Ga0209281_1000097135 521
6 3300003751 Ga0055538_1000290 Ga0055538_10002906 522
7 3300025224 Ga0209784_100190 Ga0209784_10019010 522
8 3300049132 Ga0501343_000971 Ga0501343_000971_35_1651 522
9 3300049161 Ga0501305_000618 Ga0501305_000618_1342_2958 522
10 3300049532 Ga0501316_001265 Ga0501316_001265_431_2047 522
11 3300049533 Ga0501317_002258 Ga0501317_002258_142_1758 522
12 3300049661 Ga0501217_005454 Ga0501217_005454_994_2610 522
13 3300049851 Ga0501212_001400 Ga0501212_001400_83_1699 522
14 3300049528 Ga0501312_004335 Ga0501312_004335_18_1640 524
15 3300048915 Ga0496112_0066597 Ga0496112_0066597_1579_3234 525
16 3300048919 Ga0496116_0016478 Ga0496116_0016478_1580_3271 525
17 3300048920 Ga0496117_0014733 Ga0496117_0014733_752_2443 525
18 3300048922 Ga0496119_0039767 Ga0496119_0039767_629_2320 525
19 3300048923 Ga0496120_0000914 Ga0496120_0000914_5924_7615 525
20 3300048925 Ga0496122_0032699 Ga0496122_0032699_1616_3289 525
21 3300048925 Ga0496122_0046588 Ga0496122_0046588_655_2346 525
22 3300048926 Ga0496123_0004848 Ga0496123_0004848_1187_2860 525
23 3300048927 Ga0496124_0000721 Ga0496124_0000721_46768_48441 525
24 3300048927 Ga0496124_0000957 Ga0496124_0000957_38525_40216 525
25 3300048928 Ga0496125_0002200 Ga0496125_0002200_1616_3289 525
26 3300048929 Ga0496126_0002094 Ga0496126_0002094_9316_11007 525
27 3300048929 Ga0496126_0006104 Ga0496126_0006104_8972_10663 525
28 3300059423 Ga0590074_002213 Ga0590074_002213_1425_3062 529
29 3300030500 Ga0268256_1003644 Ga0268256_10036445 532
30 3300048913 Ga0496110_0000899 Ga0496110_0000899_9200_10849 532
31 3300049551 Ga0501335_000223 Ga0501335_000223_767_2419 532
32 3300031548 Ga0307408_100027168 Ga0307408_1000271682 535
33 3300031731 Ga0307405_10025226 Ga0307405_100252261 535
34 3300031995 Ga0307409_100025836 Ga0307409_1000258362 535
35 3300032002 Ga0307416_100067419 Ga0307416_1000674191 535
36 3300006946 Ga0079104_1003564 Ga0079104_10035644 537
37 3300009098 Ga0105245_10007559 Ga0105245_100075598 537
38 3300027111 Ga0209281_1000865 Ga0209281_10008655 537
39 3300044673 Ga0453683_0000080 Ga0453683_0000080_20667_22382 538
40 3300031242 Ga0265329_10004141 Ga0265329_100041415 539
41 3300031711 Ga0265314_10000148 Ga0265314_1000014817 539
42 3300042876 Ga0451577_0006341 Ga0451577_0006341_6003_7691 540
43 iso_pu_bacteria 2857609550 2857612144 540
44 3300049591 Ga0501075_0024382 Ga0501075_0024382_1175_2821 541
45 3300049592 Ga0501076_0034797 Ga0501076_0034797_1294_2940 541
46 3300060353 Ga0501082_0033358 Ga0501082_0033358_1802_3448 541
47 iso_pu_bacteria 2818991441 2819568333 541
48 iso_pu_bacteria 2857472729 2857473176 541
49 iso_pu_bacteria 2956897341 2956900914 541
50 iso_pu_bacteria 3001892409 3001895607 541
51 iso_pu_bacteria 3006973921 3006975437 541
52 iso_pu_bacteria 8055632911 8055636043 541
53 3300011119 Ga0105246_10000518 Ga0105246_100005189 542
54 3300048919 Ga0496116_0008535 Ga0496116_0008535_1277_3049 542
55 3300048928 Ga0496125_0031895 Ga0496125_0031895_407_2179 542
56 iso_pu_bacteria 2818991459 2819674199 542
57 iso_pu_bacteria 2904755435 2904762530 542
58 iso_pu_bacteria 2919414237 2919419290 542
59 iso_pu_bacteria 2919425241 2919432675 542
60 iso_pu_bacteria 2925326138 2925328752 542
61 iso_pu_bacteria 2929297113 2929297493 542
62 iso_pu_bacteria 8054795415 8054803101 542
63 3300025229 Ga0209147_102461 Ga0209147_1024614 543
64 iso_pu_bacteria 2585428059 2587744397 543
65 iso_pu_bacteria 2643221676 2644422802 543
66 iso_pu_bacteria 2865002811 2865007023 543
67 iso_pu_bacteria 2888578766 2888584690 543
68 iso_pu_bacteria 2889049205 2889052849 543
69 iso_pu_bacteria 2964375228 2964375484 543
70 iso_pu_bacteria 2977254563 2977259115 543
71 iso_pu_bacteria 2990275345 2990280155 543
72 iso_pu_bacteria 3006978542 3006982546 543
73 iso_pu_bacteria 8007375930 8007377482 543
74 iso_pu_bacteria 8057977335 8057981565 543
75 3300048919 Ga0496116_0002261 Ga0496116_0002261_7621_9294 544
76 3300048919 Ga0496116_0006890 Ga0496116_0006890_63_1736 544
77 3300048920 Ga0496117_0000097 Ga0496117_0000097_12774_14447 544
78 3300048921 Ga0496118_0023628 Ga0496118_0023628_2522_4195 544
79 3300048922 Ga0496119_0000014 Ga0496119_0000014_182018_183691 544
80 3300048922 Ga0496119_0014126 Ga0496119_0014126_1011_2684 544
81 3300048923 Ga0496120_0000007 Ga0496120_0000007_177051_178724 544
82 3300048923 Ga0496120_0000023 Ga0496120_0000023_221944_223617 544
83 3300048923 Ga0496120_0002012 Ga0496120_0002012_12996_14669 544
84 3300048925 Ga0496122_0000014 Ga0496122_0000014_263242_264915 544
85 3300048925 Ga0496122_0024725 Ga0496122_0024725_858_2531 544
86 3300048926 Ga0496123_0005200 Ga0496123_0005200_10697_12370 544
87 3300048928 Ga0496125_0000067 Ga0496125_0000067_228452_230125 544
88 3300048929 Ga0496126_0000019 Ga0496126_0000019_263242_264915 544
89 3300048929 Ga0496126_0000764 Ga0496126_0000764_33655_35328 544
90 iso_pu_bacteria 2510917027 2511176421 544
91 iso_pu_bacteria 2512564013 2512637498 544
92 iso_pu_bacteria 2738543010 2739234068 544
93 iso_pu_bacteria 2857453340 2857457628 544
94 iso_pu_bacteria 2971410472 2971413594 544
95 iso_pu_bacteria 8056533031 8056536765 544
96 3300025294 Ga0209025_1003443 Ga0209025_10034439 545
97 3300048919 Ga0496116_0003750 Ga0496116_0003750_12744_14468 545
98 3300048925 Ga0496122_0000101 Ga0496122_0000101_116138_117859 545
99 3300048926 Ga0496123_0024099 Ga0496123_0024099_1126_2847 545
100 3300048929 Ga0496126_0000108 Ga0496126_0000108_41738_43399 545
101 3300048929 Ga0496126_0001881 Ga0496126_0001881_25792_27513 545
102 iso_pu_bacteria 2744054657 2745168624 545
103 iso_pu_bacteria 2816332336 2817620905 545
104 iso_pu_bacteria 2831905167 2831908023 545
105 iso_pu_bacteria 2857460504 2857460867 545
106 iso_pu_bacteria 2857465823 2857468552 545
107 iso_pu_bacteria 2857591370 2857595534 545
108 iso_pu_bacteria 2857604169 2857605756 545
109 iso_pu_bacteria 2915597211 2915597929 545
110 iso_pu_bacteria 2915606848 2915610488 545
111 iso_pu_bacteria 2929183550 2929189440 545
112 3300003758 Ga0055532_1003845 Ga0055532_10038452 546
113 3300025225 Ga0209566_100046 Ga0209566_100046158 546
114 3300025229 Ga0209147_100099 Ga0209147_10009976 546
115 iso_pu_bacteria 2548877040 2550905865 546
116 iso_pu_bacteria 2721755693 2723606421 546
117 iso_pu_bacteria 2728368933 2728531134 546
118 iso_pu_bacteria 2728369359 2730137019 546
119 iso_pu_bacteria 2751185905 2753808743 546
120 iso_pu_bacteria 2791355222 2793185699 546
121 iso_pu_bacteria 2802428803 2802437910 546
122 iso_pu_bacteria 2889276214 2889276973 546
123 iso_pu_bacteria 2904113452 2904117754 546
124 iso_pu_bacteria 2907202186 2907207190 546
125 iso_pu_bacteria 2938649242 2938652473 546
126 iso_pu_bacteria 2939702853 2939702957 546
127 iso_pu_bacteria 2968558590 2968561785 546
128 iso_pu_bacteria 2980125574 2980126056 546
129 iso_pu_bacteria 2980182181 2980187796 546
130 iso_pu_bacteria 2988225383 2988227537 546
131 iso_pu_bacteria 2996632988 2996637875 546
132 iso_pu_bacteria 2996706504 2996712357 546
133 iso_pu_bacteria 648028048 648172406 546
134 iso_pu_bacteria 8054465665 8054471542 546
135 iso_pu_bacteria 8057473075 8057473096 546
136 3300045051 Ga0451576_0000168 Ga0451576_0000168_58185_59978 547
137 iso_pu_bacteria 2600255286 2601640349 547
138 iso_pu_bacteria 2864733723 2864739774 547
139 iso_pu_bacteria 2971403814 2971410273 547
140 iso_pu_bacteria 2984527788 2984531367 547
141 iso_pu_bacteria 2984532647 2984537476 547
142 3300025225 Ga0209566_100112 Ga0209566_100112101 548
143 3300025242 Ga0209258_102055 Ga0209258_1020551 548
144 3300048922 Ga0496119_0004957 Ga0496119_0004957_128_1807 548
145 3300048923 Ga0496120_0010613 Ga0496120_0010613_343_2022 548
146 3300048928 Ga0496125_0003295 Ga0496125_0003295_3968_5647 548
147 iso_pu_bacteria 2524023129 2524189124 548
148 iso_pu_bacteria 2571042588 2573038548 548
149 iso_pu_bacteria 2579778775 2580935330 548
150 iso_pu_bacteria 2619619294 2621277544 548
151 iso_pu_bacteria 2881636855 2881641879 548
152 iso_pu_bacteria 2929206907 2929212050 548
153 iso_pu_bacteria 2971511577 2971514305 548
154 iso_pu_bacteria 8046991243 8046997656 548
155 3300003320 rootH2_10036929 rootH2_100369293 549
156 3300005293 Ga0065715_10014078 Ga0065715_100140782 549
157 3300005563 Ga0068855_100115821 Ga0068855_1001158213 549
158 3300009093 Ga0105240_10000662 Ga0105240_1000066217 549
159 3300009545 Ga0105237_10000113 Ga0105237_1000011348 549
160 3300009545 Ga0105237_10008953 Ga0105237_100089538 549
161 3300010375 Ga0105239_10000797 Ga0105239_1000079736 549
162 3300041404 Ga0439436_0011557 Ga0439436_0011557_881_2587 549
163 3300042007 Ga0439449_0018668 Ga0439449_0018668_57_1763 549
164 3300046459 Ga0495629_0045407 Ga0495629_0045407_212_1912 549
165 iso_pu_bacteria 2563366752 2563930089 549
166 iso_pu_bacteria 2643221543 2643740762 549
167 iso_pu_bacteria 2821111986 2821116660 549
168 iso_pu_bacteria 2885526491 2885532396 549
169 iso_pu_bacteria 2889042446 2889048221 549
170 iso_pu_bacteria 2904162308 2904167924 549
171 iso_pu_bacteria 2904490793 2904494489 549
172 iso_pu_bacteria 2931384279 2931385338 549
173 iso_pu_bacteria 2939679117 2939680482 549
174 iso_pu_bacteria 2945991243 2945996018 549
175 3300005983 Ga0081540_1003480 Ga0081540_10034804 550
176 3300009147 Ga0114129_10046680 Ga0114129_100466802 550
177 3300013296 Ga0157374_10000002 Ga0157374_10000002147 550
178 3300028577 Ga0265318_10004258 Ga0265318_100042586 550
179 3300028800 Ga0265338_10062883 Ga0265338_100628833 550
180 3300031241 Ga0265325_10015833 Ga0265325_100158334 550
181 3300031247 Ga0265340_10012260 Ga0265340_100122602 550
182 3300031247 Ga0265340_10013526 Ga0265340_100135262 550
183 3300031247 Ga0265340_10020076 Ga0265340_100200762 550
184 3300031249 Ga0265339_10004188 Ga0265339_100041888 550
185 3300031344 Ga0265316_10000336 Ga0265316_1000033612 550
186 3300031344 Ga0265316_10006230 Ga0265316_100062308 550
187 3300031595 Ga0265313_10000552 Ga0265313_100005525 550
188 3300031595 Ga0265313_10000554 Ga0265313_1000055435 550
189 3300031712 Ga0265342_10028934 Ga0265342_100289342 550
190 3300031712 Ga0265342_10037082 Ga0265342_100370822 550
191 3300044656 Ga0466969_0007802 Ga0466969_0007802_1849_3546 550
192 3300044693 Ga0466961_0022971 Ga0466961_0022971_1961_3673 550
193 3300044693 Ga0466961_0055442 Ga0466961_0055442_82_1779 550
194 3300045049 Ga0466959_0019934 Ga0466959_0019934_1587_3284 550
195 3300045049 Ga0466959_0025046 Ga0466959_0025046_656_2368 550
196 3300046517 Ga0495630_0092840 Ga0495630_0092840_39_1718 550
197 3300048919 Ga0496116_0083707 Ga0496116_0083707_55_1761 550
198 3300048924 Ga0496121_0113337 Ga0496121_0113337_14_1720 550
199 3300050507 nmdc:mga05p37_40349_c1 nmdc:mga05p37_40349_c1_1382_3067 550
200 iso_pu_bacteria 2898907183 2898907847 550
201 3300003578 Ga0006562J51391_1007253 Ga0006562J51391_10072532 551
202 3300005336 Ga0070680_100001468 Ga0070680_1000014686 551
203 3300005563 Ga0068855_100002154 Ga0068855_10000215414 551
204 3300005616 Ga0068852_100002014 Ga0068852_1000020147 551
205 3300006353 Ga0075370_10012680 Ga0075370_100126802 551
206 3300006847 Ga0075431_100016016 Ga0075431_1000160164 551
207 3300009036 Ga0105244_10027488 Ga0105244_100274881 551
208 3300013104 Ga0157370_10000386 Ga0157370_1000038612 551
209 3300013105 Ga0157369_10004366 Ga0157369_100043664 551
210 3300013307 Ga0157372_10019962 Ga0157372_100199622 551
211 3300025225 Ga0209566_100184 Ga0209566_1001844 551
212 3300025917 Ga0207660_10052437 Ga0207660_100524372 551
213 3300031665 Ga0316575_10019853 Ga0316575_100198532 551
214 3300031727 Ga0316576_10039963 Ga0316576_100399632 551
215 3300031733 Ga0316577_10003093 Ga0316577_100030933 551
216 3300035398 Ga0316574_0000254 Ga0316574_0000254_354_2042 551
217 3300036647 Ga0316582_0004345 Ga0316582_0004345_3670_5358 551
218 3300036712 Ga0316584_0002344 Ga0316584_0002344_2809_4497 551
219 3300039437 Ga0436365_1033789 Ga0436365_1033789_440_2116 551
220 3300044684 Ga0466966_0044031 Ga0466966_0044031_665_2341 551
221 3300044712 Ga0453684_0000827 Ga0453684_0000827_44035_45738 551
222 3300044712 Ga0453684_0085110 Ga0453684_0085110_528_2231 551
223 iso_pu_bacteria 2904595352 2904596343 551
224 iso_pu_bacteria 8057733483 8057735416 551
225 3300005563 Ga0068855_100084642 Ga0068855_1000846422 552
226 3300025225 Ga0209566_103386 Ga0209566_1033862 552
227 3300025233 Ga0209437_100473 Ga0209437_10047311 552
228 3300026116 Ga0207674_10002081 Ga0207674_100020816 552
229 3300028563 Ga0265319_1000124 Ga0265319_100012421 552
230 3300028577 Ga0265318_10000067 Ga0265318_1000006760 552
231 3300031235 Ga0265330_10000024 Ga0265330_1000002441 552
232 3300031238 Ga0265332_10000047 Ga0265332_1000004770 552
233 3300031239 Ga0265328_10007263 Ga0265328_100072634 552
234 3300031240 Ga0265320_10000056 Ga0265320_1000005625 552
235 3300031242 Ga0265329_10000347 Ga0265329_100003475 552
236 3300031247 Ga0265340_10000141 Ga0265340_1000014122 552
237 3300031249 Ga0265339_10002004 Ga0265339_100020047 552
238 3300031250 Ga0265331_10000284 Ga0265331_1000028413 552
239 3300031344 Ga0265316_10000077 Ga0265316_1000007757 552
240 3300031595 Ga0265313_10000003 Ga0265313_10000003113 552
241 3300031711 Ga0265314_10000143 Ga0265314_1000014326 552
242 3300031712 Ga0265342_10000047 Ga0265342_1000004781 552
243 3300031995 Ga0307409_100079193 Ga0307409_1000791932 552
244 3300042876 Ga0451577_0007483 Ga0451577_0007483_530_2206 552
245 3300044712 Ga0453684_0000007 Ga0453684_0000007_322919_324595 552
246 3300046517 Ga0495630_0000361 Ga0495630_0000361_31356_33080 552
247 3300046690 Ga0495624_0020558 Ga0495624_0020558_1860_3584 552
248 3300047471 Ga0495684_0005763 Ga0495684_0005763_2040_3764 552
249 3300049574 Ga0501038_0020179 Ga0501038_0020179_3652_5346 552
250 3300049576 Ga0501040_0022704 Ga0501040_0022704_503_2197 552
251 3300049741 Ga0501079_0021119 Ga0501079_0021119_1533_3227 552
252 3300049743 Ga0501081_0066949 Ga0501081_0066949_97_1791 552
253 3300049824 Ga0501045_0037438 Ga0501045_0037438_1780_3474 552
254 iso_pu_bacteria 2919160200 2919164981 552
255 iso_pu_bacteria 2946053406 2946058725 552
256 3300005548 Ga0070665_100001468 Ga0070665_10000146816 553
257 3300013100 Ga0157373_10011037 Ga0157373_100110374 553
258 3300013307 Ga0157372_10050025 Ga0157372_100500252 553
259 3300025986 Ga0207658_10058207 Ga0207658_100582073 553
260 3300028379 Ga0268266_10001492 Ga0268266_1000149216 553
261 3300031344 Ga0265316_10000050 Ga0265316_10000050105 553
262 3300031691 Ga0316579_10028749 Ga0316579_100287492 553
263 3300031727 Ga0316576_10026575 Ga0316576_100265752 553
264 3300031733 Ga0316577_10003441 Ga0316577_100034412 553
265 3300031733 Ga0316577_10019641 Ga0316577_100196413 553
266 3300032133 Ga0316583_10000579 Ga0316583_100005792 553
267 3300037588 Ga0316581_0002940 Ga0316581_0002940_1978_3663 553
268 3300044673 Ga0453683_0048141 Ga0453683_0048141_311_2017 553
269 3300044712 Ga0453684_0000415 Ga0453684_0000415_54754_56463 553
270 3300044712 Ga0453684_0002346 Ga0453684_0002346_22773_24614 553
271 3300044712 Ga0453684_0003715 Ga0453684_0003715_16606_18315 553
272 3300044712 Ga0453684_0168791 Ga0453684_0168791_662_2371 553
273 3300045051 Ga0451576_0000058 Ga0451576_0000058_115432_117138 553
274 3300045051 Ga0451576_0008049 Ga0451576_0008049_744_2453 553
275 3300047322 Ga0495680_0126604 Ga0495680_0126604_86_1810 553
276 3300049588 Ga0501072_0056910 Ga0501072_0056910_1222_2946 553
277 3300059424 Ga0590075_003398 Ga0590075_003398_441_2150 553
278 iso_pu_bacteria 2576861424 2578339092 553
279 iso_pu_bacteria 2980176882 2980180519 553
280 3300005471 Ga0070698_100018351 Ga0070698_1000183514 554
281 3300005548 Ga0070665_100000158 Ga0070665_10000015851 554
282 3300005614 Ga0068856_100158270 Ga0068856_1001582702 554
283 3300025926 Ga0207659_10008025 Ga0207659_100080252 554
284 3300025940 Ga0207691_10009350 Ga0207691_100093502 554
285 3300028379 Ga0268266_10000296 Ga0268266_1000029644 554
286 3300036401 Ga0373937_0006646 Ga0373937_0006646_3494_5218 554
287 3300039093 Ga0400489_75158 Ga0400489_75158_4328_6025 554
288 3300045051 Ga0451576_0009393 Ga0451576_0009393_4260_6002 554
289 3300047471 Ga0495684_0022555 Ga0495684_0022555_208_1932 554
290 3300005444 Ga0070694_100020449 Ga0070694_1000204494 555
291 3300005518 Ga0070699_100007709 Ga0070699_1000077093 555
292 3300005546 Ga0070696_100021344 Ga0070696_1000213444 555
293 3300005981 Ga0081538_10019007 Ga0081538_100190073 555
294 3300006852 Ga0075433_10028014 Ga0075433_100280143 555
295 3300009148 Ga0105243_10164871 Ga0105243_101648711 555
296 3300025922 Ga0207646_10129586 Ga0207646_101295862 555
297 3300027907 Ga0207428_10000845 Ga0207428_100008452 555
298 3300031249 Ga0265339_10006944 Ga0265339_100069443 555
299 3300031665 Ga0316575_10006517 Ga0316575_100065171 555
300 3300031691 Ga0316579_10044078 Ga0316579_100440782 555
301 3300031691 Ga0316579_10059394 Ga0316579_100593941 555
302 3300031728 Ga0316578_10002031 Ga0316578_100020312 555
303 3300031733 Ga0316577_10012028 Ga0316577_100120282 555
304 3300032133 Ga0316583_10000729 Ga0316583_100007294 555
305 3300032137 Ga0316585_10023577 Ga0316585_100235771 555
306 3300035398 Ga0316574_0005773 Ga0316574_0005773_4837_6567 555
307 3300036647 Ga0316582_0000469 Ga0316582_0000469_11686_13416 555
308 3300036647 Ga0316582_0055747 Ga0316582_0055747_547_2259 555
309 3300036712 Ga0316584_0016262 Ga0316584_0016262_1084_2814 555
310 3300037068 Ga0373925_0056675 Ga0373925_0056675_964_2685 555
311 3300042876 Ga0451577_0024460 Ga0451577_0024460_308_2005 555
312 3300044673 Ga0453683_0001110 Ga0453683_0001110_861_2582 555
313 3300044712 Ga0453684_0000044 Ga0453684_0000044_364742_366433 555
314 3300044712 Ga0453684_0000137 Ga0453684_0000137_246017_247753 555
315 3300044712 Ga0453684_0017913 Ga0453684_0017913_7491_9212 555
316 3300044712 Ga0453684_0021878 Ga0453684_0021878_3339_5036 555
317 3300044712 Ga0453684_0087369 Ga0453684_0087369_1357_3027 555
318 3300045051 Ga0451576_0017215 Ga0451576_0017215_2918_4690 555
319 3300050514 nmdc:mga08x19_35082_c1 nmdc:mga08x19_35082_c1_147_1886 555
320 3300050515 nmdc:mga0a205_27009_c1 nmdc:mga0a205_27009_c1_3485_5182 555
321 3300005340 Ga0070689_100123374 Ga0070689_1001233741 556
322 3300005471 Ga0070698_100030279 Ga0070698_1000302796 556
323 3300009553 Ga0105249_10009261 Ga0105249_100092614 556
324 3300025961 Ga0207712_10018473 Ga0207712_100184732 556
325 3300028577 Ga0265318_10004201 Ga0265318_100042011 556
326 3300031240 Ga0265320_10026500 Ga0265320_100265002 556
327 3300031247 Ga0265340_10001022 Ga0265340_1000102211 556
328 3300031665 Ga0316575_10012324 Ga0316575_100123242 556
329 3300031903 Ga0307407_10033706 Ga0307407_100337062 556
330 3300042876 Ga0451577_0002977 Ga0451577_0002977_16687_18360 556
331 3300042876 Ga0451577_0043648 Ga0451577_0043648_936_2609 556
332 3300044673 Ga0453683_0012324 Ga0453683_0012324_3335_5008 556
333 3300044673 Ga0453683_0020654 Ga0453683_0020654_2108_3799 556
334 3300044712 Ga0453684_0010279 Ga0453684_0010279_13809_15497 556
335 3300044712 Ga0453684_0013587 Ga0453684_0013587_10510_12183 556
336 3300044712 Ga0453684_0067802 Ga0453684_0067802_1438_3111 556
337 3300044712 Ga0453684_0081527 Ga0453684_0081527_1844_3535 556
338 3300044712 Ga0453684_0141262 Ga0453684_0141262_31_1713 556
339 3300049591 Ga0501075_0017591 Ga0501075_0017591_2921_4615 556
340 3300049743 Ga0501081_0123966 Ga0501081_0123966_126_1820 556
341 2162886007 SwRhRL2b_contig_408518 SwRhRL2b_0865.00007410 561
342 3300003203 JGI25406J46586_10005362 JGI25406J46586_100053625 561
343 3300005289 Ga0065704_10070475 Ga0065704_100704759 561
344 3300005295 Ga0065707_10000455 Ga0065707_1000045513 561
345 3300005295 Ga0065707_10004165 Ga0065707_100041653 561
346 3300005295 Ga0065707_10082979 Ga0065707_100829794 561
347 3300005340 Ga0070689_100121214 Ga0070689_1001212141 561
348 3300005471 Ga0070698_100057157 Ga0070698_1000571571 561
349 3300005617 Ga0068859_100094020 Ga0068859_1000940203 561
350 3300005985 Ga0081539_10014983 Ga0081539_100149835 561
351 3300006194 Ga0075427_10000991 Ga0075427_100009914 561
352 3300006844 Ga0075428_100010104 Ga0075428_1000101042 561
353 3300006844 Ga0075428_100112941 Ga0075428_1001129412 561
354 3300006852 Ga0075433_10128176 Ga0075433_101281761 561
355 3300006880 Ga0075429_100092031 Ga0075429_1000920313 561
356 3300006931 Ga0097620_100094012 Ga0097620_1000940123 561
357 3300009094 Ga0111539_10100990 Ga0111539_101009902 561
358 3300009147 Ga0114129_10004751 Ga0114129_100047517 561
359 3300009147 Ga0114129_10011022 Ga0114129_1001102212 561
360 3300009147 Ga0114129_10034382 Ga0114129_100343823 561
361 3300011119 Ga0105246_10072482 Ga0105246_100724822 561
362 3300036712 Ga0316584_0106478 Ga0316584_0106478_189_1892 561
363 3300050507 nmdc:mga05p37_14462_c1 nmdc:mga05p37_14462_c1_1173_2876 561
364 3300050507 nmdc:mga05p37_217_c1 nmdc:mga05p37_217_c1_45078_46796 561
365 3300050507 nmdc:mga05p37_93636_c1 nmdc:mga05p37_93636_c1_1203_2906 561
366 3300050508 nmdc:mga09592_116408_c1 nmdc:mga09592_116408_c1_356_2047 561
367 3300050508 nmdc:mga09592_34503_c1 nmdc:mga09592_34503_c1_17_1711 561
368 3300050512 nmdc:mga0n895_18531_c1 nmdc:mga0n895_18531_c1_567_2252 561

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03950

tRNA-synt_1c_C

tRNA synthetases class I (E and Q), anti-codon binding domain

407

507

0.99

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

88

405

0.95

PF20974

tRNA-synt_1c_C2

tRNA synthetases class I (E and Q), anti-codon binding domain

524

600

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qrt-assembly1.cif.gz_A glutaminyl-trna synthetase mutant d235g complexed with glutamine transfer rna 0.977 8 552
1qrs-assembly1.cif.gz_A glutaminyl-trna synthetase mutant d235n complexed with glutamine transfer rna 0.9768 8 552
1qru-assembly1.cif.gz_A glutaminyl-trna synthetase mutant i129t complexed with glutamine transfer rna 0.9764 8 552
1qrt-assembly1.cif.gz_A glutaminyl-trna synthetase mutant d235g complexed with glutamine transfer rna 0.9752 8 552
4jyz-assembly1.cif.gz_A crystal structure of e. coli glutaminyl-trna synthetase bound to atp and native trna(gln) containing the cmnm5s2u34 anticodon wobble base 0.9751 8 553
ID Description Score Start End Superfamily
4p2bA02 Alpha Beta;Alpha-Beta Complex;Glutamyl-tRNA Synthetase; domain 3;Glutamyl-tRNA Synthetase; Domain 3 0.9775 100 208 3.90.800.10
af_Q8IE10_246_596_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9702 1 345 3.40.50.620
af_Q8BML9_683_770_2.40.240.10 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Ribosomal Protein L25; Chain P 0.9612 468 550 2.40.240.10
4p2bA02 Alpha Beta;Alpha-Beta Complex;Glutamyl-tRNA Synthetase; domain 3;Glutamyl-tRNA Synthetase; Domain 3 0.9589 100 208 3.90.800.10
af_Q58772_87_395_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9574 27 341 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A6N6X9W1-F1-model_v4 deleted 0.9924 116 241
AF-A0A090SBN7-F1-model_v4 deleted 0.9906 97 180
AF-A0A6N8K8H0-F1-model_v4 deleted 0.9894 54 188
AF-A0A6J5XSK1-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.9882 26 132 GO:0004818
GO:0005524
GO:0005829
GO:0006424
GO:0009791
GO:0017102
GO:0048608
AF-A0A7S1TLD4-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.9874 140 291 GO:0004819
GO:0005524
GO:0005829
GO:0006425

Feature Viewer

pLDDT pTM Quality
90.99 0.85 High
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Predicted Structure (AlphaFold2)

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