F424840

General Info

Members Datasets Scaffolds Average Seq Length
368 180 736 403

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0161237|Ga0501033_0161237_75_1433
Length 452
Sequence MGVISSYQSLKTKIDAPPIRAAFLFLNSIPKETLMDYDIQDHAPEHKSGIAPAARGEHDQIMQMFEEFKAANDERLASLGHRADVLLEEKVDRINGALDAQIKRIDELALKSARPSLDGSRVRHGDTTAREHKSAFDAYVRSGEASALRQIETKAMSAGSNADGGYLVPTELEHEIGQRLAAISPIRAIASVREISGGIYKKPFMTAGPATGWVGETDSRTQTTSPTLDALSFPAMELYAMPAATATLLDDSAVNIDEWIASEVELTFAVQEGAAFVNGDGSSKPKGFLNYTAVANTSWAWGSLGYVASGSAGAFPASDPSDVLVDTIYALKAGYRQNGTFVMNRKTQAAIRKFKDTGGSYLWQPPAQAGGRASLMTFPLVEAEDMPDIGANSLPIAFGDFKRGYLIVDRLGVRVLRDPYSAKPYVLFYTTKRVGGGVQDFDAIKLVKFAAS

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
3 3300000044 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
84 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
85 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
86 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
92 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
93 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
94 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
95 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
96 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
97 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
98 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
110 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
125 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
159 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
160 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
163 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
164 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
165 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
172 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
173 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
174 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
175 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
176 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
177 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
178 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
179 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
180 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.28
Metatranscriptomes 0
Isolates 2.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.08
Nodule 0.27
Rhizoplane 3.8
Rhizosphere 87.5
Stem 0
Stem Tuber 0
Unclassified 5.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_0161237 3300049570 Bacteria 1614
2 ARcpr5yngRDRAFT_c000033 3300000043 Bacteria 21895
3 ARSoilOldRDRAFT_c000073 3300000044 Bacteria 19311
4 JGI25406J46586_10001232 3300003203 Bacteria 12030
5 Ga0065715_10000891 3300005293 Bacteria 15781
6 Ga0070666_10022721 3300005335 Unclassified 4076
7 Ga0070680_100022635 3300005336 Bacteria 5008
8 Ga0068868_100094218 3300005338 Unclassified 2415
9 Ga0070660_100083368 3300005339 Bacteria 2511
10 Ga0070689_100011711 3300005340 Bacteria 6291
11 Ga0070691_10009307 3300005341 Bacteria 4490
12 Ga0070687_100009984 3300005343 Bacteria 4085
13 Ga0070692_10066898 3300005345 Bacteria 1906
14 Ga0070675_100067770 3300005354 Bacteria 2953
15 Ga0070673_100039606 3300005364 Bacteria 3608
16 Ga0070667_100022729 3300005367 Bacteria 5200
17 Ga0070703_10002945 3300005406 Bacteria 4871
18 Ga0070709_10009230 3300005434 Bacteria 5430
19 Ga0070714_100071254 3300005435 Bacteria 3004
20 Ga0070713_100006561 3300005436 Bacteria 8083
21 Ga0070710_10001010 3300005437 Bacteria 13349
22 Ga0070711_100011532 3300005439 Bacteria 5493
23 Ga0070705_100000045 3300005440 Bacteria 62815
24 Ga0070700_100043829 3300005441 Bacteria 2753
25 Ga0070694_100012840 3300005444 Bacteria 5221
26 Ga0070663_100053701 3300005455 Unclassified 2877
27 Ga0070681_10037298 3300005458 Bacteria 4878
28 Ga0070681_10040242 3300005458 Bacteria 4684
29 Ga0070681_10052242 3300005458 Bacteria 4076
30 Ga0070679_100149357 3300005530 Bacteria 2314
31 Ga0070679_100207743 3300005530 Bacteria 1922
32 Ga0070686_100018995 3300005544 Bacteria 4044
33 Ga0070686_100032441 3300005544 Unclassified 3203
34 Ga0070695_100007365 3300005545 Bacteria 6525
35 Ga0070695_100037495 3300005545 Bacteria 3055
36 Ga0070696_100003584 3300005546 Bacteria 10347
37 Ga0070665_100033793 3300005548 Bacteria 5144
38 Ga0070665_100037811 3300005548 Unclassified 4852
39 Ga0070704_100008082 3300005549 Bacteria 6285
40 Ga0068857_100035726 3300005577 Bacteria 4402
41 Ga0068857_100133416 3300005577 Bacteria 2241
42 Ga0068854_100111279 3300005578 Bacteria 2066
43 Ga0068864_100046597 3300005618 Unclassified 3720
44 Ga0068864_100082478 3300005618 Bacteria 2821
45 Ga0068860_100153997 3300005843 Bacteria 2215
46 Ga0068862_100006034 3300005844 Bacteria 10088
47 Ga0081455_10001954 3300005937 Bacteria 24756
48 Ga0081455_10077407 3300005937 Bacteria 2736
49 Ga0081539_10000051 3300005985 Bacteria 268337
50 Ga0070717_10004538 3300006028 Bacteria 10039
51 Ga0075364_10106336 3300006051 Bacteria 1870
52 Ga0070716_100003471 3300006173 Bacteria 7427
53 Ga0105242_10013150 3300009176 Bacteria 6386
54 Ga0105249_10012723 3300009553 Bacteria 7416
55 Ga0105239_10091585 3300010375 Bacteria 3355
56 Ga0105239_10161675 3300010375 Unclassified 2502
57 Ga0105246_10034775 3300011119 Bacteria 3361
58 Ga0157370_10012847 3300013104 Bacteria 8657
59 Ga0157370_10074282 3300013104 Bacteria 3207
60 Ga0157370_10082595 3300013104 Bacteria 3022
61 Ga0157378_10064849 3300013297 Unclassified 3268
62 Ga0163162_10082630 3300013306 Unclassified 3285
63 Ga0157372_10477259 3300013307 Bacteria 1454
64 Ga0157372_10589170 3300013307 Bacteria 1296
65 Ga0157377_10072495 3300014745 Unclassified 1994
66 Ga0207666_1005493 3300025271 Bacteria 1621
67 Ga0209564_1001227 3300025295 Bacteria 28939
68 Ga0207710_10063629 3300025900 Unclassified 1679
69 Ga0207680_10057452 3300025903 Unclassified 2354
70 Ga0207685_10004306 3300025905 Unclassified 3601
71 Ga0207699_10025153 3300025906 Unclassified 3266
72 Ga0207705_10167667 3300025909 Bacteria 1652
73 Ga0207707_10017720 3300025912 Bacteria 6213
74 Ga0207707_10178866 3300025912 Bacteria 1852
75 Ga0207707_10243683 3300025912 Bacteria 1562
76 Ga0207693_10020153 3300025915 Bacteria 5305
77 Ga0207663_10016226 3300025916 Unclassified 4124
78 Ga0207660_10006314 3300025917 Bacteria 7684
79 Ga0207660_10066846 3300025917 Bacteria 2602
80 Ga0207662_10123768 3300025918 Bacteria 1624
81 Ga0207657_10012483 3300025919 Bacteria 8385
82 Ga0207652_10167746 3300025921 Bacteria 1969
83 Ga0207652_10201356 3300025921 Bacteria 1792
84 Ga0207706_10114014 3300025933 Bacteria 2378
85 Ga0207686_10006422 3300025934 Bacteria 6328
86 Ga0207709_10093306 3300025935 Unclassified 1973
87 Ga0207670_10032512 3300025936 Bacteria 3355
88 Ga0207667_10205502 3300025949 Bacteria 2019
89 Ga0207712_10015554 3300025961 Bacteria 4912
90 Ga0207658_10184341 3300025986 Bacteria 1730
91 Ga0207639_10140030 3300026041 Bacteria 2014
92 Ga0207708_10019980 3300026075 Bacteria 5050
93 Ga0207676_10068862 3300026095 Bacteria 2832
94 Ga0207674_10009702 3300026116 Bacteria 10973
95 Ga0207675_100019627 3300026118 Bacteria 6309
96 Ga0209966_1002903 3300027695 Bacteria 2872
97 Ga0207428_10009843 3300027907 Bacteria 8563
98 Ga0268265_10001684 3300028380 Bacteria 18028
99 Ga0268264_10021566 3300028381 Bacteria 5259
100 Ga0265325_10000106 3300031241 Bacteria 59197
101 Ga0265325_10022903 3300031241 Bacteria 3417
102 Ga0265325_10027235 3300031241 Bacteria 3091
103 Ga0265329_10005695 3300031242 Bacteria 5008
104 Ga0265339_10005649 3300031249 Bacteria 8300
105 Ga0265331_10000006 3300031250 Bacteria 418907
106 Ga0265331_10001182 3300031250 Bacteria 19775
107 Ga0265327_10000808 3300031251 Bacteria 47626
108 Ga0265313_10002494 3300031595 Bacteria 15858
109 Ga0265313_10008437 3300031595 Bacteria 6842
110 Ga0265313_10018285 3300031595 Bacteria 3942
111 Ga0265314_10022838 3300031711 Bacteria 4785
112 Ga0265314_10026876 3300031711 Bacteria 4318
113 Ga0265342_10003344 3300031712 Bacteria 13246
114 Ga0265342_10011231 3300031712 Bacteria 6144
115 Ga0373958_0008390 3300034819 Bacteria 1672
116 Ga0373940_0009852 3300035088 Bacteria 2233
117 Ga0373951_0003763 3300035091 Bacteria 3654
118 Ga0373932_0002860 3300035112 Bacteria 4268
119 Ga0373939_0011670 3300035114 Bacteria 2223
120 Ga0373941_0009050 3300035115 Bacteria 2496
121 Ga0373942_0005232 3300035207 Bacteria 3005
122 Ga0373961_0009094 3300035241 Bacteria 2425
123 Ga0373931_0006307 3300035691 Bacteria 5532
124 Ga0373931_0168787 3300035691 Bacteria 1288
125 Ga0395899_0000090 3300037312 Bacteria 156587
126 Ga0395899_0124386 3300037312 Bacteria 1845
127 Ga0395900_0000017 3300037418 Bacteria 369602
128 Ga0395900_0001625 3300037418 Bacteria 26414
129 Ga0395900_0034488 3300037418 Bacteria 5211
130 Ga0395900_0240735 3300037418 Bacteria 1815
131 Ga0395898_0000030 3300037466 Bacteria 369577
132 Ga0395898_0001570 3300037466 Bacteria 31287
133 Ga0395898_0085773 3300037466 Bacteria 3035
134 Ga0395905_0000081 3300037471 Bacteria 160409
135 Ga0395901_0000015 3300038443 Bacteria 373388
136 Ga0395901_0010927 3300038443 Bacteria 9199
137 Ga0395901_0029074 3300038443 Bacteria 5686
138 Ga0395901_0082827 3300038443 Bacteria 3352
139 Ga0466963_0015797 3300044694 Bacteria 4684
140 Ga0466967_0000881 3300045976 Bacteria 15995
141 Ga0495638_0020567 3300046460 Bacteria 4359
142 Ga0495648_0054137 3300046524 Bacteria 2426
143 Ga0495686_0076690 3300047472 Bacteria 2048
144 Ga0495686_0106491 3300047472 Bacteria 1686
145 Ga0496102_0003495 3300048905 Bacteria 13324
146 Ga0496102_0057608 3300048905 Unclassified 3548
147 Ga0496104_0330679 3300048907 Bacteria 1437
148 Ga0496106_0018768 3300048909 Bacteria 5122
149 Ga0496106_0043486 3300048909 Unclassified 3370
150 Ga0496107_0228562 3300048910 Bacteria 1384
151 Ga0496108_0016669 3300048911 Bacteria 6001
152 Ga0496110_0245793 3300048913 Unclassified 1628
153 Ga0496111_0016361 3300048914 Bacteria 5108
154 Ga0496112_0000004 3300048915 Bacteria 553294
155 Ga0496113_0002626 3300048916 Bacteria 10516
156 Ga0496115_0063062 3300048918 Bacteria 2990
157 Ga0496115_0078030 3300048918 Bacteria 2694
158 Ga0496116_0025069 3300048919 Bacteria 4394
159 Ga0496117_0095724 3300048920 Bacteria 1896
160 Ga0496118_0086013 3300048921 Bacteria 2186
161 Ga0496118_0101528 3300048921 Bacteria 1942
162 Ga0496121_0000885 3300048924 Bacteria 54051
163 Ga0496123_0000245 3300048926 Bacteria 109471
164 Ga0496123_0072411 3300048926 Bacteria 2144
165 Ga0496125_0000040 3300048928 Bacteria 314478
166 Ga0496126_0033338 3300048929 Bacteria 4845
167 Ga0496126_0044989 3300048929 Bacteria 4060
168 Ga0501031_0000275 3300049568 Bacteria 29050
169 Ga0501031_0004533 3300049568 Bacteria 9003
170 Ga0501031_0008196 3300049568 Bacteria 6800
171 Ga0501031_0011722 3300049568 Bacteria 5716
172 Ga0501031_0022608 3300049568 Bacteria 4097
173 Ga0501031_0035691 3300049568 Bacteria 3244
174 Ga0501031_0046906 3300049568 Bacteria 2817
175 Ga0501032_0000038 3300049569 Bacteria 115810
176 Ga0501032_0000703 3300049569 Bacteria 27246
177 Ga0501032_0099846 3300049569 Bacteria 1923
178 Ga0501032_0263071 3300049569 Bacteria 1118
179 Ga0501033_0000070 3300049570 Bacteria 97795
180 Ga0501033_0000089 3300049570 Bacteria 86782
181 Ga0501033_0001237 3300049570 Bacteria 22932
182 Ga0501033_0001794 3300049570 Bacteria 18728
183 Ga0501033_0006669 3300049570 Bacteria 9022
184 Ga0501033_0011642 3300049570 Bacteria 6726
185 Ga0501033_0013951 3300049570 Bacteria 6112
186 Ga0501033_0015816 3300049570 Bacteria 5718
187 Ga0501033_0021105 3300049570 Bacteria 4916
188 Ga0501033_0051278 3300049570 Bacteria 3058
189 Ga0501033_0121220 3300049570 Bacteria 1898
190 Ga0501034_0000087 3300049571 Bacteria 166714
191 Ga0501034_0000228 3300049571 Bacteria 106111
192 Ga0501034_0001325 3300049571 Bacteria 33444
193 Ga0501034_0007205 3300049571 Bacteria 11870
194 Ga0501034_0038703 3300049571 Bacteria 4829
195 Ga0501034_0042779 3300049571 Bacteria 4586
196 Ga0501034_0121825 3300049571 Bacteria 2594
197 Ga0501034_0125285 3300049571 Bacteria 2554
198 Ga0501034_0125736 3300049571 Bacteria 2549
199 Ga0501034_0159062 3300049571 Bacteria 2231
200 Ga0501034_0293272 3300049571 Bacteria 1564
201 Ga0501034_0341118 3300049571 Bacteria 1428
202 Ga0501036_0000010 3300049572 Bacteria 163304
203 Ga0501036_0000256 3300049572 Bacteria 36120
204 Ga0501036_0021204 3300049572 Bacteria 5458
205 Ga0501036_0027477 3300049572 Bacteria 4807
206 Ga0501036_0172810 3300049572 Bacteria 1820
207 Ga0501037_0000014 3300049573 Bacteria 171015
208 Ga0501037_0000135 3300049573 Bacteria 68925
209 Ga0501037_0000900 3300049573 Bacteria 22173
210 Ga0501037_0000988 3300049573 Bacteria 21083
211 Ga0501037_0012326 3300049573 Bacteria 6293
212 Ga0501037_0016604 3300049573 Bacteria 5417
213 Ga0501037_0020796 3300049573 Bacteria 4845
214 Ga0501037_0030603 3300049573 Bacteria 3977
215 Ga0501037_0046902 3300049573 Bacteria 3167
216 Ga0501037_0112043 3300049573 Bacteria 1965
217 Ga0501038_0000023 3300049574 Bacteria 151469
218 Ga0501038_0000079 3300049574 Bacteria 81639
219 Ga0501038_0003897 3300049574 Bacteria 13872
220 Ga0501038_0010759 3300049574 Bacteria 8363
221 Ga0501038_0027484 3300049574 Bacteria 5061
222 Ga0501038_0068092 3300049574 Bacteria 3027
223 Ga0501038_0072580 3300049574 Bacteria 2916
224 Ga0501038_0199175 3300049574 Bacteria 1608
225 Ga0501038_0303202 3300049574 Bacteria 1253
226 Ga0501039_0000044 3300049575 Bacteria 108828
227 Ga0501039_0000527 3300049575 Bacteria 27669
228 Ga0501039_0002586 3300049575 Bacteria 13526
229 Ga0501041_0034936 3300049577 Bacteria 3045
230 Ga0501042_0009450 3300049578 Bacteria 6497
231 Ga0501043_0000021 3300049579 Bacteria 155025
232 Ga0501043_0000022 3300049579 Bacteria 154467
233 Ga0501043_0000088 3300049579 Bacteria 82282
234 Ga0501043_0001351 3300049579 Bacteria 21483
235 Ga0501043_0010677 3300049579 Bacteria 7194
236 Ga0501043_0014277 3300049579 Bacteria 6214
237 Ga0501043_0027762 3300049579 Bacteria 4443
238 Ga0501043_0034100 3300049579 Bacteria 4004
239 Ga0501043_0035160 3300049579 Bacteria 3941
240 Ga0501043_0118401 3300049579 Bacteria 2077
241 Ga0501046_0000341 3300049580 Bacteria 47097
242 Ga0501046_0001731 3300049580 Bacteria 20832
243 Ga0501046_0047541 3300049580 Bacteria 3401
244 Ga0501046_0068330 3300049580 Bacteria 2766
245 Ga0501046_0246770 3300049580 Bacteria 1315
246 Ga0501047_0000041 3300049581 Bacteria 184355
247 Ga0501047_0000412 3300049581 Bacteria 47833
248 Ga0501047_0001977 3300049581 Bacteria 19664
249 Ga0501047_0014690 3300049581 Bacteria 7451
250 Ga0501047_0025064 3300049581 Bacteria 5730
251 Ga0501047_0192159 3300049581 Bacteria 1904
252 Ga0501047_0207859 3300049581 Bacteria 1817
253 Ga0501047_0276611 3300049581 Bacteria 1524
254 Ga0501048_0000022 3300049582 Bacteria 68365
255 Ga0501048_0012049 3300049582 Bacteria 6443
256 Ga0501048_0018908 3300049582 Bacteria 5063
257 Ga0501067_0000541 3300049583 Bacteria 20513
258 Ga0501068_0026483 3300049584 Bacteria 3416
259 Ga0501069_0000012 3300049585 Bacteria 148453
260 Ga0501069_0012795 3300049585 Bacteria 4467
261 Ga0501069_0034855 3300049585 Bacteria 2771
262 Ga0501070_0000692 3300049586 Bacteria 30900
263 Ga0501070_0000986 3300049586 Bacteria 25571
264 Ga0501070_0001122 3300049586 Bacteria 24014
265 Ga0501070_0006883 3300049586 Bacteria 9672
266 Ga0501070_0008825 3300049586 Bacteria 8522
267 Ga0501070_0012634 3300049586 Bacteria 7122
268 Ga0501070_0032553 3300049586 Bacteria 4363
269 Ga0501070_0036146 3300049586 Bacteria 4125
270 Ga0501070_0043292 3300049586 Bacteria 3747
271 Ga0501070_0053858 3300049586 Bacteria 3336
272 Ga0501070_0078445 3300049586 Bacteria 2733
273 Ga0501070_0087652 3300049586 Bacteria 2576
274 Ga0501070_0228704 3300049586 Bacteria 1524
275 Ga0501071_0001855 3300049587 Bacteria 12528
276 Ga0501071_0014884 3300049587 Bacteria 5330
277 Ga0501071_0029749 3300049587 Bacteria 3857
278 Ga0501071_0032984 3300049587 Bacteria 3680
279 Ga0501071_0033903 3300049587 Bacteria 3630
280 Ga0501071_0102430 3300049587 Bacteria 2111
281 Ga0501072_0005690 3300049588 Bacteria 9490
282 Ga0501072_0016483 3300049588 Bacteria 5675
283 Ga0501072_0057206 3300049588 Bacteria 3073
284 Ga0501072_0075588 3300049588 Bacteria 2664
285 Ga0501072_0112596 3300049588 Bacteria 2166
286 Ga0501073_0000082 3300049589 Bacteria 59745
287 Ga0501073_0014437 3300049589 Bacteria 5739
288 Ga0501073_0027084 3300049589 Bacteria 4102
289 Ga0501073_0048656 3300049589 Bacteria 2976
290 Ga0501073_0185496 3300049589 Bacteria 1440
291 Ga0501074_0000021 3300049590 Bacteria 71950
292 Ga0501074_0000325 3300049590 Bacteria 27683
293 Ga0501074_0013437 3300049590 Bacteria 5952
294 Ga0501074_0033073 3300049590 Bacteria 3747
295 Ga0501076_0093978 3300049592 Bacteria 2414
296 Ga0501076_0222144 3300049592 Bacteria 1544
297 Ga0501079_0002217 3300049741 Bacteria 14010
298 Ga0501079_0009897 3300049741 Bacteria 7234
299 Ga0501079_0147484 3300049741 Bacteria 1834
300 Ga0501079_0195377 3300049741 Bacteria 1579
301 Ga0501080_0000138 3300049742 Bacteria 50982
302 Ga0501080_0000451 3300049742 Bacteria 31990
303 Ga0501080_0000905 3300049742 Bacteria 24287
304 Ga0501080_0020312 3300049742 Bacteria 6146
305 Ga0501081_0111652 3300049743 Bacteria 1940
306 Ga0501081_0188132 3300049743 Bacteria 1494
307 Ga0501083_0000114 3300049744 Bacteria 55139
308 Ga0501083_0000166 3300049744 Bacteria 43156
309 Ga0501083_0004596 3300049744 Bacteria 9753
310 Ga0501083_0022758 3300049744 Bacteria 4348
311 Ga0501035_0000039 3300049822 Bacteria 156824
312 Ga0501035_0000047 3300049822 Bacteria 146497
313 Ga0501035_0000146 3300049822 Bacteria 86011
314 Ga0501035_0001418 3300049822 Bacteria 24567
315 Ga0501035_0003306 3300049822 Bacteria 15451
316 Ga0501035_0015586 3300049822 Bacteria 7012
317 Ga0501035_0028411 3300049822 Bacteria 5105
318 Ga0501035_0039741 3300049822 Bacteria 4256
319 Ga0501035_0058372 3300049822 Bacteria 3438
320 Ga0501044_0000047 3300049823 Bacteria 146449
321 Ga0501044_0000054 3300049823 Bacteria 141399
322 Ga0501044_0000361 3300049823 Bacteria 56979
323 Ga0501044_0001876 3300049823 Bacteria 24349
324 Ga0501044_0023774 3300049823 Bacteria 6516
325 Ga0501044_0078681 3300049823 Bacteria 3341
326 Ga0501044_0081312 3300049823 Bacteria 3280
327 Ga0501044_0099313 3300049823 Bacteria 2929
328 Ga0501044_0143307 3300049823 Bacteria 2377
329 Ga0501044_0202892 3300049823 Bacteria 1940
330 Ga0501044_0208896 3300049823 Bacteria 1907
331 Ga0501044_0285191 3300049823 Bacteria 1584
332 Ga0501045_0037335 3300049824 Bacteria 3530
333 Ga0501045_0060989 3300049824 Bacteria 2766
334 Ga0501045_0199310 3300049824 Bacteria 1492
335 nmdc:mga00v17_131552_c1 3300050491 Bacteria 1599
336 nmdc:mga08y16_37349_c1 3300050511 Bacteria 5102
337 Ga0500651_0047817 3300053093 Bacteria 2689
338 Ga0500562_011187 3300053108 Bacteria 2278
339 Ga0500594_0012998 3300053118 Bacteria 1972
340 Ga0500595_005705 3300053119 Bacteria 5391
341 Ga0500608_026524 3300053122 Bacteria 2722
342 Ga0500652_000062 3300053131 Bacteria 47514
343 Ga0500559_0000275 3300053136 Bacteria 39820
344 Ga0500559_0075424 3300053136 Bacteria 1525
345 Ga0500577_0000025 3300053142 Bacteria 38251
346 Ga0500616_0001298 3300053153 Bacteria 24834
347 Ga0500616_0013177 3300053153 Bacteria 4812
348 Ga0500622_0004399 3300053156 Bacteria 8872
349 Ga0501084_0007902 3300054114 Bacteria 8756
350 Ga0501084_0055461 3300054114 Bacteria 3315
351 Ga0501084_0282141 3300054114 Bacteria 1403
352 Ga0501082_0000193 3300060353 Bacteria 52651
353 Ga0501082_0000744 3300060353 Bacteria 28643
354 Ga0501082_0008034 3300060353 Bacteria 9108
355 Ga0501082_0011345 3300060353 Bacteria 7661
356 Ga0501082_0045269 3300060353 Bacteria 3795
357 Ga0501082_0130664 3300060353 Bacteria 2179
358 Ga0530510_0092760 3300061734 Bacteria 2204
359 2513590785 2513237087 Bacteria 5817514
360 2600375141 2600254933 Bacteria 4750527
361 2643774080 2643221550 Bacteria 4619371
362 2643774815 2643221551 Bacteria 3750538
363 2643793259 2643221555 Bacteria 3749717
364 2643838650 2643221564 Bacteria 4193379
365 2919452932 2919450847 Bacteria 5631160
366 2939670072 2939669807 Bacteria 5028511
367 2996313177 2996310559 Bacteria 6357320
368 8001850736 8001845381 Bacteria 5804942
369 Ga0501033_0161237
370 ARcpr5yngRDRAFT_c000033
371 ARSoilOldRDRAFT_c000073
372 JGI25406J46586_10001232
373 Ga0065715_10000891
374 Ga0070666_10022721
375 Ga0070680_100022635
376 Ga0068868_100094218
377 Ga0070660_100083368
378 Ga0070689_100011711
379 Ga0070691_10009307
380 Ga0070687_100009984
381 Ga0070692_10066898
382 Ga0070675_100067770
383 Ga0070673_100039606
384 Ga0070667_100022729
385 Ga0070703_10002945
386 Ga0070709_10009230
387 Ga0070714_100071254
388 Ga0070713_100006561
389 Ga0070710_10001010
390 Ga0070711_100011532
391 Ga0070705_100000045
392 Ga0070700_100043829
393 Ga0070694_100012840
394 Ga0070663_100053701
395 Ga0070681_10037298
396 Ga0070681_10040242
397 Ga0070681_10052242
398 Ga0070679_100149357
399 Ga0070679_100207743
400 Ga0070686_100018995
401 Ga0070686_100032441
402 Ga0070695_100007365
403 Ga0070695_100037495
404 Ga0070696_100003584
405 Ga0070665_100033793
406 Ga0070665_100037811
407 Ga0070704_100008082
408 Ga0068857_100035726
409 Ga0068857_100133416
410 Ga0068854_100111279
411 Ga0068864_100046597
412 Ga0068864_100082478
413 Ga0068860_100153997
414 Ga0068862_100006034
415 Ga0081455_10001954
416 Ga0081455_10077407
417 Ga0081539_10000051
418 Ga0070717_10004538
419 Ga0075364_10106336
420 Ga0070716_100003471
421 Ga0105242_10013150
422 Ga0105249_10012723
423 Ga0105239_10091585
424 Ga0105239_10161675
425 Ga0105246_10034775
426 Ga0157370_10012847
427 Ga0157370_10074282
428 Ga0157370_10082595
429 Ga0157378_10064849
430 Ga0163162_10082630
431 Ga0157372_10477259
432 Ga0157372_10589170
433 Ga0157377_10072495
434 Ga0207666_1005493
435 Ga0209564_1001227
436 Ga0207710_10063629
437 Ga0207680_10057452
438 Ga0207685_10004306
439 Ga0207699_10025153
440 Ga0207705_10167667
441 Ga0207707_10017720
442 Ga0207707_10178866
443 Ga0207707_10243683
444 Ga0207693_10020153
445 Ga0207663_10016226
446 Ga0207660_10006314
447 Ga0207660_10066846
448 Ga0207662_10123768
449 Ga0207657_10012483
450 Ga0207652_10167746
451 Ga0207652_10201356
452 Ga0207706_10114014
453 Ga0207686_10006422
454 Ga0207709_10093306
455 Ga0207670_10032512
456 Ga0207667_10205502
457 Ga0207712_10015554
458 Ga0207658_10184341
459 Ga0207639_10140030
460 Ga0207708_10019980
461 Ga0207676_10068862
462 Ga0207674_10009702
463 Ga0207675_100019627
464 Ga0209966_1002903
465 Ga0207428_10009843
466 Ga0268265_10001684
467 Ga0268264_10021566
468 Ga0265325_10000106
469 Ga0265325_10022903
470 Ga0265325_10027235
471 Ga0265329_10005695
472 Ga0265339_10005649
473 Ga0265331_10000006
474 Ga0265331_10001182
475 Ga0265327_10000808
476 Ga0265313_10002494
477 Ga0265313_10008437
478 Ga0265313_10018285
479 Ga0265314_10022838
480 Ga0265314_10026876
481 Ga0265342_10003344
482 Ga0265342_10011231
483 Ga0373958_0008390
484 Ga0373940_0009852
485 Ga0373951_0003763
486 Ga0373932_0002860
487 Ga0373939_0011670
488 Ga0373941_0009050
489 Ga0373942_0005232
490 Ga0373961_0009094
491 Ga0373931_0006307
492 Ga0373931_0168787
493 Ga0395899_0000090
494 Ga0395899_0124386
495 Ga0395900_0000017
496 Ga0395900_0001625
497 Ga0395900_0034488
498 Ga0395900_0240735
499 Ga0395898_0000030
500 Ga0395898_0001570
501 Ga0395898_0085773
502 Ga0395905_0000081
503 Ga0395901_0000015
504 Ga0395901_0010927
505 Ga0395901_0029074
506 Ga0395901_0082827
507 Ga0466963_0015797
508 Ga0466967_0000881
509 Ga0495638_0020567
510 Ga0495648_0054137
511 Ga0495686_0076690
512 Ga0495686_0106491
513 Ga0496102_0003495
514 Ga0496102_0057608
515 Ga0496104_0330679
516 Ga0496106_0018768
517 Ga0496106_0043486
518 Ga0496107_0228562
519 Ga0496108_0016669
520 Ga0496110_0245793
521 Ga0496111_0016361
522 Ga0496112_0000004
523 Ga0496113_0002626
524 Ga0496115_0063062
525 Ga0496115_0078030
526 Ga0496116_0025069
527 Ga0496117_0095724
528 Ga0496118_0086013
529 Ga0496118_0101528
530 Ga0496121_0000885
531 Ga0496123_0000245
532 Ga0496123_0072411
533 Ga0496125_0000040
534 Ga0496126_0033338
535 Ga0496126_0044989
536 Ga0501031_0000275
537 Ga0501031_0004533
538 Ga0501031_0008196
539 Ga0501031_0011722
540 Ga0501031_0022608
541 Ga0501031_0035691
542 Ga0501031_0046906
543 Ga0501032_0000038
544 Ga0501032_0000703
545 Ga0501032_0099846
546 Ga0501032_0263071
547 Ga0501033_0000070
548 Ga0501033_0000089
549 Ga0501033_0001237
550 Ga0501033_0001794
551 Ga0501033_0006669
552 Ga0501033_0011642
553 Ga0501033_0013951
554 Ga0501033_0015816
555 Ga0501033_0021105
556 Ga0501033_0051278
557 Ga0501033_0121220
558 Ga0501034_0000087
559 Ga0501034_0000228
560 Ga0501034_0001325
561 Ga0501034_0007205
562 Ga0501034_0038703
563 Ga0501034_0042779
564 Ga0501034_0121825
565 Ga0501034_0125285
566 Ga0501034_0125736
567 Ga0501034_0159062
568 Ga0501034_0293272
569 Ga0501034_0341118
570 Ga0501036_0000010
571 Ga0501036_0000256
572 Ga0501036_0021204
573 Ga0501036_0027477
574 Ga0501036_0172810
575 Ga0501037_0000014
576 Ga0501037_0000135
577 Ga0501037_0000900
578 Ga0501037_0000988
579 Ga0501037_0012326
580 Ga0501037_0016604
581 Ga0501037_0020796
582 Ga0501037_0030603
583 Ga0501037_0046902
584 Ga0501037_0112043
585 Ga0501038_0000023
586 Ga0501038_0000079
587 Ga0501038_0003897
588 Ga0501038_0010759
589 Ga0501038_0027484
590 Ga0501038_0068092
591 Ga0501038_0072580
592 Ga0501038_0199175
593 Ga0501038_0303202
594 Ga0501039_0000044
595 Ga0501039_0000527
596 Ga0501039_0002586
597 Ga0501041_0034936
598 Ga0501042_0009450
599 Ga0501043_0000021
600 Ga0501043_0000022
601 Ga0501043_0000088
602 Ga0501043_0001351
603 Ga0501043_0010677
604 Ga0501043_0014277
605 Ga0501043_0027762
606 Ga0501043_0034100
607 Ga0501043_0035160
608 Ga0501043_0118401
609 Ga0501046_0000341
610 Ga0501046_0001731
611 Ga0501046_0047541
612 Ga0501046_0068330
613 Ga0501046_0246770
614 Ga0501047_0000041
615 Ga0501047_0000412
616 Ga0501047_0001977
617 Ga0501047_0014690
618 Ga0501047_0025064
619 Ga0501047_0192159
620 Ga0501047_0207859
621 Ga0501047_0276611
622 Ga0501048_0000022
623 Ga0501048_0012049
624 Ga0501048_0018908
625 Ga0501067_0000541
626 Ga0501068_0026483
627 Ga0501069_0000012
628 Ga0501069_0012795
629 Ga0501069_0034855
630 Ga0501070_0000692
631 Ga0501070_0000986
632 Ga0501070_0001122
633 Ga0501070_0006883
634 Ga0501070_0008825
635 Ga0501070_0012634
636 Ga0501070_0032553
637 Ga0501070_0036146
638 Ga0501070_0043292
639 Ga0501070_0053858
640 Ga0501070_0078445
641 Ga0501070_0087652
642 Ga0501070_0228704
643 Ga0501071_0001855
644 Ga0501071_0014884
645 Ga0501071_0029749
646 Ga0501071_0032984
647 Ga0501071_0033903
648 Ga0501071_0102430
649 Ga0501072_0005690
650 Ga0501072_0016483
651 Ga0501072_0057206
652 Ga0501072_0075588
653 Ga0501072_0112596
654 Ga0501073_0000082
655 Ga0501073_0014437
656 Ga0501073_0027084
657 Ga0501073_0048656
658 Ga0501073_0185496
659 Ga0501074_0000021
660 Ga0501074_0000325
661 Ga0501074_0013437
662 Ga0501074_0033073
663 Ga0501076_0093978
664 Ga0501076_0222144
665 Ga0501079_0002217
666 Ga0501079_0009897
667 Ga0501079_0147484
668 Ga0501079_0195377
669 Ga0501080_0000138
670 Ga0501080_0000451
671 Ga0501080_0000905
672 Ga0501080_0020312
673 Ga0501081_0111652
674 Ga0501081_0188132
675 Ga0501083_0000114
676 Ga0501083_0000166
677 Ga0501083_0004596
678 Ga0501083_0022758
679 Ga0501035_0000039
680 Ga0501035_0000047
681 Ga0501035_0000146
682 Ga0501035_0001418
683 Ga0501035_0003306
684 Ga0501035_0015586
685 Ga0501035_0028411
686 Ga0501035_0039741
687 Ga0501035_0058372
688 Ga0501044_0000047
689 Ga0501044_0000054
690 Ga0501044_0000361
691 Ga0501044_0001876
692 Ga0501044_0023774
693 Ga0501044_0078681
694 Ga0501044_0081312
695 Ga0501044_0099313
696 Ga0501044_0143307
697 Ga0501044_0202892
698 Ga0501044_0208896
699 Ga0501044_0285191
700 Ga0501045_0037335
701 Ga0501045_0060989
702 Ga0501045_0199310
703 nmdc:mga00v17_131552_c1
704 nmdc:mga08y16_37349_c1
705 Ga0500651_0047817
706 Ga0500562_011187
707 Ga0500594_0012998
708 Ga0500595_005705
709 Ga0500608_026524
710 Ga0500652_000062
711 Ga0500559_0000275
712 Ga0500559_0075424
713 Ga0500577_0000025
714 Ga0500616_0001298
715 Ga0500616_0013177
716 Ga0500622_0004399
717 Ga0501084_0007902
718 Ga0501084_0055461
719 Ga0501084_0282141
720 Ga0501082_0000193
721 Ga0501082_0000744
722 Ga0501082_0008034
723 Ga0501082_0011345
724 Ga0501082_0045269
725 Ga0501082_0130664
726 Ga0530510_0092760
727 2513590785
728 2600375141
729 2643774080
730 2643774815
731 2643793259
732 2643838650
733 2919452932
734 2939670072
735 2996313177
736 8001850736

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05065

Phage_capsid

Phage capsid family

164

449

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6tsu-assembly1.cif.gz_U4 capsid of empty gta particle computed with c5 symmetry 0.7467 149 416
6tsu-assembly1.cif.gz_A5 capsid of empty gta particle computed with c5 symmetry 0.74 149 416
6tb9-assembly1.cif.gz_B5 capsid of native gta particle computed with c5 symmetry 0.7314 149 416
6tsu-assembly1.cif.gz_B5 capsid of empty gta particle computed with c5 symmetry 0.7275 152 415
6tb9-assembly1.cif.gz_C5 capsid of native gta particle computed with c5 symmetry 0.71 149 416
ID Description Score Start End Superfamily
af_P71947_196_475_3.30.2400.10 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold;Major capsid protein gp5 0.6434 131 414 3.30.2400.10
af_P71947_196_475_3.30.2400.10 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold;Major capsid protein gp5 0.6375 131 414 3.30.2400.10
af_Q2G1W8_117_397_3.30.2400.30 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold; 0.6179 121 410 3.30.2400.30
af_Q2G1W8_117_397_3.30.2400.30 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold; 0.6105 121 410 3.30.2400.30
af_Q18810_85_235_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.6058 304 335 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A1X6YAY3-F1-model_v4 Phage capsid-like C-terminal domain-containing protein 0.8823 288 349
AF-A0A2V2LG63-F1-model_v4 Phage major capsid protein 0.8615 228 417
AF-A0A2W5CCQ3-F1-model_v4 deleted 0.8597 238 418
AF-A0A379WSH5-F1-model_v4 Capsid protein 0.859 287 369
AF-A0A7V7BDU0-F1-model_v4 deleted 0.8551 248 417

Map