F424993

General Info

Members Datasets Scaffolds Average Seq Length
369 276 734 506

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100030173|Ga0075430_1000301733
Length 536
Sequence LADVRVGVDVGGTNTDAVVMAGRRLLGWAKTPTTADVTGGILSGVREALARAETTPAAVRAVMIGTTHFTNAVVERRRLEPTAAVRLGLPATASVPPFADWPADLRDAIDGRGYLAHGGYEYDGREIAPLDEAELRDIARQIRRQGATALAICAVFSPIRADLEWRAAAILQEGLPDVRVSLSHEIGRLGLLERENACILNACLSGLAATTVTAIVAALHEMALDAAVYLSQNDGTLMSAEFARRYPVLTFASGPTNSMRGAAYLSGLRDAIVIDVGGTTADVGALVGGFPREASLAVEVGGVRTNFRMPDLLTLGLGGGSLVRPGVAGTPPTIGPDSVGYRLTDRAIVFGGHDLTATDVAVATGLAALGDPARLSPDQRALAPAAIAEVRRRLAEAIDQVKTSAAEVPVVLVGGGSILVDGALPGASTAIRPDHFEVANAIGAAIGQVSGEVDQVHSLDETSRDDLIARVAAGADPDTVEVVDAEDVPLAYLPGSATRVHVKVVGALRAASGELQENLARSSPLATRNWSTDVGD

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
11 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
12 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
42 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
43 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
45 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
50 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
57 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
63 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
64 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
65 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
66 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
74 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
75 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
78 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
86 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
87 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
88 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
89 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
92 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
95 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
96 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
99 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
100 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
101 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
115 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
116 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
137 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
142 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
143 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
144 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
145 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
146 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
147 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
148 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
149 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
150 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
151 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
154 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
155 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
156 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
157 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
160 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
161 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
162 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
163 2511231018 Pseudomonas sp. GM60 Isolate Nodule
164 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
165 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
166 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
167 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
168 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
169 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
170 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
171 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
172 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
173 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
174 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
175 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
176 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
177 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
178 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
179 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
180 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
181 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
182 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
183 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
184 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
185 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
186 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
187 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
188 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
189 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
190 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
191 2643221568 Rhizobium sp. Root564 Isolate Unclassified
192 2643221582 Rhizobium sp. Root651 Isolate Unclassified
193 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
194 2643221618 Ensifer sp. Root231 Isolate Unclassified
195 2643221626 Ensifer sp. Root31 Isolate Unclassified
196 2643221655 Ensifer sp. Root1252 Isolate Unclassified
197 2643221659 Ensifer sp. Root127 Isolate Unclassified
198 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
199 2643221693 Rhizobium sp. Root491 Isolate Unclassified
200 2643221698 Ensifer sp. Root142 Isolate Unclassified
201 2643221712 Ensifer sp. Root258 Isolate Unclassified
202 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
203 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
204 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
205 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
206 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
207 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
208 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
209 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
210 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
211 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
212 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
213 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
214 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
215 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
216 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
217 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
218 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
219 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
220 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
221 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
222 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
223 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
224 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
225 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
226 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
227 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
228 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
229 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
230 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
231 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
232 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
233 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
234 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
235 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
236 2844163670 Ensifer sp. 1H6 Isolate Unclassified
237 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
238 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
239 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
240 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
241 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
242 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
243 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
244 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
245 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
246 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
247 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
248 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
249 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
250 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
251 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
252 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
253 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
254 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
255 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
256 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
257 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
258 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
259 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
260 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
261 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
262 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
263 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
264 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
265 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
266 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
267 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
268 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
269 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
270 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
271 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
272 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
273 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
274 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
275 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
276 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 62.87
Metatranscriptomes 0
Isolates 37.13

Biome Distribution

Category Percentage (%)
Aerial Root 1.63
Bulb 0
Endosphere 17.34
Nodule 17.34
Rhizoplane 2.98
Rhizosphere 40.92
Stem 0
Stem Tuber 0
Unclassified 1.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100030173 3300006846 Bacteria 4604
2 JGI25162J39368_1001185 3300002737 Bacteria 15369
3 JGI25158J39367_1002866 3300002739 Bacteria 2733
4 JGI25152J39213_1000315 3300002773 Bacteria 31149
5 JGI25152J39213_1001113 3300002773 Bacteria 12554
6 JGI25159J45721_1000043 3300002987 Bacteria 63751
7 JGI25165J46597_1000263 3300003214 Bacteria 68906
8 JGI25153J46596_10000363 3300003215 Bacteria 31149
9 JGI25153J46596_10001846 3300003215 Bacteria 12554
10 rootH1_10015153 3300003323 Bacteria 6835
11 JGI25160J50197_1000144 3300003354 Bacteria 63751
12 JGI25161J50226_1000601 3300003374 Bacteria 14919
13 Ga0058692_1001242 3300003856 Bacteria 9749
14 Ga0055543_1000200 3300004625 Bacteria 49056
15 Ga0065165_1000461 3300005262 Bacteria 63722
16 Ga0065714_10002843 3300005288 Bacteria 15799
17 Ga0070666_10014166 3300005335 Bacteria 5074
18 Ga0070667_100003178 3300005367 Bacteria 14078
19 Ga0070667_100043213 3300005367 Bacteria 3782
20 Ga0070665_100020344 3300005548 Bacteria 6666
21 Ga0070665_100196493 3300005548 Unclassified 2018
22 Ga0068860_100001411 3300005843 Bacteria 26062
23 Ga0068862_100004553 3300005844 Bacteria 11687
24 Ga0081455_10003083 3300005937 Bacteria 19425
25 Ga0081538_10004326 3300005981 Bacteria 13120
26 Ga0081539_10000219 3300005985 Bacteria 134405
27 Ga0075364_10000758 3300006051 Bacteria 16936
28 Ga0075364_10001033 3300006051 Bacteria 14803
29 Ga0075366_10027956 3300006195 Bacteria 3309
30 Ga0075370_10004164 3300006353 Bacteria 6976
31 Ga0075428_100009440 3300006844 Bacteria 10828
32 Ga0075429_100045690 3300006880 Unclassified 3810
33 Ga0099826_10018532 3300006948 Bacteria 5251
34 Ga0111539_10017612 3300009094 Bacteria 8842
35 Ga0105245_10203197 3300009098 Bacteria 1904
36 Ga0114129_10012400 3300009147 Bacteria 12133
37 Ga0105243_10000150 3300009148 Bacteria 79825
38 Ga0105238_10013029 3300009551 Bacteria 8391
39 Ga0105249_10004309 3300009553 Bacteria 12302
40 Ga0105239_10013060 3300010375 Bacteria 9232
41 Ga0157373_10007815 3300013100 Bacteria 7952
42 Ga0157371_10000002 3300013102 Bacteria 665040
43 Ga0157370_10000269 3300013104 Bacteria 65839
44 Ga0157370_10042339 3300013104 Bacteria 4389
45 Ga0157369_10044062 3300013105 Bacteria 4859
46 Ga0157379_10179314 3300014968 Bacteria 1914
47 Ga0213872_10001530 3300021361 Bacteria 14868
48 Ga0209436_101502 3300025208 Bacteria 8018
49 Ga0209437_100104 3300025233 Bacteria 220736
50 Ga0207425_1000858 3300025245 Bacteria 14885
51 Ga0209129_1000426 3300025258 Bacteria 31943
52 Ga0209129_1000884 3300025258 Bacteria 18443
53 Ga0209233_1000054 3300025261 Bacteria 439669
54 Ga0209130_1000274 3300025284 Bacteria 64411
55 Ga0209025_1000925 3300025294 Bacteria 44920
56 Ga0209025_1001358 3300025294 Bacteria 32858
57 Ga0209025_1013323 3300025294 Bacteria 5179
58 Ga0209758_1000875 3300025297 Bacteria 41411
59 Ga0209758_1003054 3300025297 Bacteria 15931
60 Ga0209758_1003279 3300025297 Bacteria 15009
61 Ga0207426_1000460 3300025302 Bacteria 63857
62 Ga0207681_10073276 3300025923 Bacteria 2395
63 Ga0207709_10000005 3300025935 Bacteria 806813
64 Ga0207712_10031100 3300025961 Bacteria 3592
65 Ga0207658_10002171 3300025986 Bacteria 14589
66 Ga0207658_10050230 3300025986 Bacteria 3068
67 Ga0209371_1000012 3300027312 Bacteria 748304
68 Ga0209371_1001161 3300027312 Bacteria 19274
69 Ga0209371_1001251 3300027312 Bacteria 18144
70 Ga0209371_1001440 3300027312 Bacteria 16178
71 Ga0209282_1000154 3300027666 Bacteria 40042
72 Ga0209282_1008240 3300027666 Bacteria 6565
73 Ga0268266_10014054 3300028379 Bacteria 6892
74 Ga0268266_10061484 3300028379 Bacteria 3239
75 Ga0268266_10130799 3300028379 Bacteria 2245
76 Ga0268264_10000122 3300028381 Bacteria 189690
77 Ga0268256_1000013 3300030500 Bacteria 752103
78 Ga0268256_1000992 3300030500 Bacteria 19265
79 Ga0268256_1004579 3300030500 Bacteria 5686
80 Ga0307509_10000003 3300031507 Bacteria 577578
81 Ga0307415_100008486 3300032126 Bacteria 5699
82 Ga0307510_10000005 3300033180 Bacteria 633068
83 Ga0307510_10000012 3300033180 Bacteria 345634
84 Ga0373953_0001311 3300035117 Bacteria 7125
85 Ga0373956_0054108 3300035119 Bacteria 1808
86 Ga0373957_0040727 3300035120 Bacteria 1748
87 Ga0373933_0002518 3300035724 Bacteria 10293
88 Ga0373937_0016702 3300036401 Bacteria 6522
89 Ga0373937_0208685 3300036401 Bacteria 1837
90 Ga0395898_0019892 3300037466 Bacteria 6827
91 Ga0436364_0370576 3300037853 Bacteria 8323
92 Ga0395901_0006152 3300038443 Bacteria 12162
93 Ga0400489_67773 3300039093 Bacteria 9870
94 Ga0436365_0108213 3300039437 Bacteria 2327
95 Ga0436365_0730098 3300039437 Bacteria 3991
96 Ga0436360_0079975 3300039438 Bacteria 5394
97 Ga0436361_0632832 3300039447 Bacteria 15526
98 Ga0466971_0053752 3300044719 Unclassified 1815
99 Ga0466967_0030739 3300045976 Bacteria 4510
100 Ga0466967_0044698 3300045976 Bacteria 3844
101 Ga0495617_000066 3300046452 Bacteria 92026
102 Ga0495629_0103685 3300046459 Bacteria 1984
103 Ga0495638_0001051 3300046460 Bacteria 27180
104 Ga0495580_0004853 3300046472 Bacteria 11250
105 Ga0495585_0033023 3300046492 Bacteria 2932
106 Ga0495607_0013575 3300046501 Bacteria 5332
107 Ga0495583_0004874 3300046506 Bacteria 9363
108 Ga0495583_0038623 3300046506 Bacteria 2255
109 Ga0495606_0014386 3300046507 Bacteria 6181
110 Ga0495620_0001834 3300046515 Bacteria 12512
111 Ga0495631_0006486 3300046518 Bacteria 6037
112 Ga0495632_0000078 3300046519 Bacteria 100643
113 Ga0495632_0007501 3300046519 Bacteria 6836
114 Ga0495663_0000421 3300046525 Bacteria 15452
115 Ga0495663_0000906 3300046525 Bacteria 9957
116 Ga0495654_0000533 3300046530 Bacteria 30686
117 Ga0495654_0003801 3300046530 Bacteria 9140
118 Ga0495654_0004455 3300046530 Bacteria 8306
119 Ga0495668_0005080 3300046616 Bacteria 9055
120 Ga0495668_0005264 3300046616 Bacteria 8851
121 Ga0495668_0015288 3300046616 Bacteria 4486
122 Ga0495625_0001234 3300046660 Bacteria 32301
123 Ga0495588_0000820 3300046674 Bacteria 13850
124 Ga0495588_0002762 3300046674 Bacteria 7536
125 Ga0495613_0042418 3300046689 Bacteria 3367
126 Ga0495613_0105069 3300046689 Bacteria 2039
127 Ga0495671_0032691 3300046692 Bacteria 2655
128 Ga0495649_0012560 3300046694 Bacteria 4920
129 Ga0495660_0018365 3300046810 Bacteria 4021
130 Ga0495660_0044504 3300046810 Bacteria 2441
131 Ga0495680_0065234 3300047322 Bacteria 2789
132 Ga0495687_001599 3300047443 Bacteria 20444
133 Ga0495687_023230 3300047443 Bacteria 2964
134 Ga0495673_0000113 3300047469 Bacteria 163495
135 Ga0495681_0032318 3300047470 Bacteria 2636
136 Ga0495686_0012975 3300047472 Bacteria 5806
137 Ga0496102_0003227 3300048905 Bacteria 13833
138 Ga0496102_0010294 3300048905 Bacteria 8041
139 Ga0496104_0115384 3300048907 Bacteria 2577
140 Ga0496105_0032016 3300048908 Bacteria 4313
141 Ga0496106_0000729 3300048909 Bacteria 23698
142 Ga0496113_0138297 3300048916 Bacteria 1915
143 Ga0496115_0007813 3300048918 Bacteria 7886
144 Ga0496116_0000049 3300048919 Bacteria 314452
145 Ga0496116_0000216 3300048919 Bacteria 108542
146 Ga0496116_0026713 3300048919 Bacteria 4213
147 Ga0496116_0052213 3300048919 Bacteria 2709
148 Ga0496116_0091964 3300048919 Bacteria 1841
149 Ga0496117_0000012 3300048920 Bacteria 608530
150 Ga0496117_0000016 3300048920 Bacteria 523642
151 Ga0496117_0007126 3300048920 Bacteria 11049
152 Ga0496118_0000051 3300048921 Bacteria 241198
153 Ga0496118_0002299 3300048921 Bacteria 25964
154 Ga0496118_0030386 3300048921 Bacteria 4509
155 Ga0496119_0012377 3300048922 Bacteria 6936
156 Ga0496119_0055483 3300048922 Bacteria 2406
157 Ga0496119_0060148 3300048922 Bacteria 2276
158 Ga0496120_0000660 3300048923 Bacteria 50656
159 Ga0496120_0008810 3300048923 Bacteria 7247
160 Ga0496121_0000005 3300048924 Bacteria 1034486
161 Ga0496121_0005387 3300048924 Bacteria 16437
162 Ga0496121_0015281 3300048924 Bacteria 8062
163 Ga0496121_0159160 3300048924 Unclassified 1653
164 Ga0496122_0000002 3300048925 Bacteria 905834
165 Ga0496122_0000195 3300048925 Bacteria 138274
166 Ga0496122_0019125 3300048925 Bacteria 6280
167 Ga0496123_0000002 3300048926 Bacteria 1811682
168 Ga0496123_0000153 3300048926 Bacteria 140053
169 Ga0496123_0018647 3300048926 Bacteria 5505
170 Ga0496123_0021266 3300048926 Bacteria 5047
171 Ga0496124_0000574 3300048927 Bacteria 62330
172 Ga0496125_0000449 3300048928 Bacteria 74908
173 Ga0496125_0057177 3300048928 Unclassified 3161
174 Ga0496125_0129517 3300048928 Bacteria 1780
175 Ga0496126_0000081 3300048929 Bacteria 218818
176 Ga0495678_004651 3300049459 Bacteria 7873
177 Ga0501031_0000234 3300049568 Bacteria 31584
178 Ga0501032_0006588 3300049569 Bacteria 8526
179 Ga0501033_0001980 3300049570 Bacteria 17849
180 Ga0501034_0003346 3300049571 Bacteria 18286
181 Ga0501036_0000368 3300049572 Bacteria 31710
182 Ga0501037_0000043 3300049573 Bacteria 118391
183 Ga0501040_0004694 3300049576 Bacteria 8869
184 Ga0501043_0000169 3300049579 Bacteria 58853
185 Ga0501047_0002029 3300049581 Bacteria 19364
186 Ga0501047_0020184 3300049581 Bacteria 6398
187 Ga0501070_0001123 3300049586 Bacteria 24014
188 Ga0501074_0006437 3300049590 Bacteria 8481
189 Ga0501035_0011021 3300049822 Bacteria 8370
190 Ga0501044_0001107 3300049823 Bacteria 32046
191 Ga0501045_0007790 3300049824 Bacteria 7450
192 nmdc:mga00v17_21_c1 3300050491 Bacteria 55853
193 nmdc:mga00v17_3_c1 3300050491 Bacteria 242367
194 nmdc:mga0yw44_24638_c1 3300050492 Bacteria 3409
195 nmdc:mga06z11_57274_c1 3300050494 Bacteria 2019
196 nmdc:mga07m45_29849_c1 3300050496 Bacteria 3019
197 nmdc:mga05p37_30627_c1 3300050507 Bacteria 6565
198 nmdc:mga05p37_87641_c1 3300050507 Unclassified 3837
199 nmdc:mga09592_95670_c1 3300050508 Bacteria 2541
200 nmdc:mga0qj67_27200_c1 3300050509 Bacteria 4430
201 nmdc:mga0sz30_20456_c1 3300050516 Bacteria 2669
202 Ga0500578_0018699 3300053086 Bacteria 4450
203 Ga0500644_0001675 3300053088 Bacteria 5776
204 Ga0500557_013262 3300053105 Bacteria 2164
205 Ga0500592_000010 3300053116 Bacteria 76714
206 Ga0500592_000081 3300053116 Bacteria 23392
207 Ga0500592_000165 3300053116 Bacteria 13294
208 Ga0500608_003469 3300053122 Bacteria 5915
209 Ga0500618_001005 3300053125 Bacteria 14223
210 Ga0500618_002311 3300053125 Bacteria 7325
211 Ga0500658_0001615 3300053134 Bacteria 8992
212 Ga0500658_0003154 3300053134 Bacteria 6288
213 Ga0500561_0000162 3300053137 Bacteria 12553
214 Ga0500568_0000553 3300053139 Bacteria 27567
215 Ga0500573_0011165 3300053140 Bacteria 5024
216 Ga0500616_0000011 3300053153 Bacteria 732880
217 Ga0500616_0001757 3300053153 Bacteria 19825
218 Ga0500622_0000393 3300053156 Bacteria 42195
219 Ga0500622_0004684 3300053156 Bacteria 8463
220 Ga0500627_0000036 3300053158 Bacteria 79400
221 Ga0500627_0000039 3300053158 Bacteria 70430
222 Ga0500627_0000166 3300053158 Bacteria 19492
223 Ga0500627_0000373 3300053158 Bacteria 12187
224 Ga0500627_0005012 3300053158 Bacteria 4339
225 Ga0500634_0002952 3300053161 Bacteria 7405
226 Ga0500636_0000007 3300053177 Bacteria 171404
227 Ga0500636_0001818 3300053177 Bacteria 11685
228 Ga0500661_000038 3300055283 Bacteria 19798
229 Ga0530510_0001794 3300061734 Bacteria 14642
230 Ga0530510_0096405 3300061734 Bacteria 2162
231 2501077835 2501025502 Bacteria 9641094
232 2511092199 2510917013 Bacteria 9951648
233 2511131556 2510917022 Bacteria 6504556
234 2511186312 2510917028 Bacteria 6185411
235 2511335710 2511231018 Bacteria 6436256
236 2513578420 2513237085 Bacteria 7695351
237 2513711119 2513237103 Bacteria 7647401
238 2513913373 2513237144 Bacteria 7530820
239 2515645167 2515154114 Bacteria 7848616
240 2515738150 2515154134 Bacteria 7220242
241 2517041162 2516653077 Bacteria 7555578
242 2517080207 2516653085 Bacteria 7346596
243 2537875062 2537561587 Bacteria 5425293
244 2537877442 2537561587 Bacteria 5425293
245 2554245511 2554235003 Bacteria 5877155
246 2558905871 2558860112 Bacteria 9931328
247 2559296659 2558860242 Bacteria 5568029
248 2585169547 2582581283 Bacteria 6030556
249 2585232207 2582581299 Bacteria 6518058
250 2585275023 2582581307 Bacteria 6597605
251 2585332975 2582581316 Bacteria 7774528
252 2585525547 2585427526 Bacteria 7258840
253 2585561263 2585427531 Bacteria 6992870
254 2585901785 2585427608 Bacteria 6544331
255 2585908143 2585427609 Bacteria 6667127
256 2587983822 2585428125 Bacteria 6662905
257 2599602851 2599185210 Bacteria 5624189
258 2599604744 2599185210 Bacteria 5624189
259 2601611841 2600255279 Bacteria 5605316
260 2601749657 2600255308 Bacteria 5611129
261 2616552895 2615840698 Bacteria 7319877
262 2617381329 2617270742 Bacteria 6808054
263 2623590473 2622736626 Bacteria 7181580
264 2643729700 2643221541 Bacteria 5498788
265 2643854626 2643221568 Bacteria 5187270
266 2643917371 2643221582 Bacteria 5804683
267 2644044060 2643221606 Bacteria 5588032
268 2644104810 2643221618 Bacteria 7717186
269 2644151241 2643221626 Bacteria 8069654
270 2644313229 2643221655 Bacteria 7722067
271 2644336315 2643221659 Bacteria 7890716
272 2644392529 2643221671 Bacteria 5496681
273 2644520787 2643221693 Bacteria 5513853
274 2644547151 2643221698 Bacteria 7756764
275 2644612852 2643221712 Bacteria 7729434
276 2766065071 2765235942 Bacteria 7445910
277 2778174528 2775507266 Bacteria 7392367
278 2808987112 2808606387 Bacteria 5697198
279 2819560586 2818991439 Bacteria 6907412
280 2838666582 2838661181 Bacteria 7385261
281 2838677922 2838675328 Bacteria 4909118
282 2838679040 2838675328 Bacteria 4909118
283 2838690777 2838686498 Bacteria 7807632
284 2838717172 2838714209 Bacteria 5525906
285 2838717992 2838714209 Bacteria 5525906
286 2838722217 2838719591 Bacteria 5523910
287 2838723338 2838719591 Bacteria 5523910
288 2838727921 2838724970 Bacteria 4908691
289 2838728708 2838724970 Bacteria 4908691
290 2838736676 2838729681 Bacteria 7400765
291 2838749638 2838742623 Bacteria 7396178
292 2841849579 2841846520 Bacteria 5345850
293 2841858302 2841851746 Bacteria 7532261
294 2841861380 2841859092 Bacteria 5436171
295 2841863526 2841859092 Bacteria 5436171
296 2842116771 2842110456 Bacteria 7656360
297 2842127673 2842124991 Bacteria 5346824
298 2842132815 2842130223 Bacteria 4909145
299 2842133809 2842130223 Bacteria 4909145
300 2842154808 2842152218 Bacteria 4908957
301 2842155927 2842152218 Bacteria 4908957
302 2842160597 2842156927 Bacteria 6894975
303 2842164096 2842163707 Bacteria 6916235
304 2842173307 2842170452 Bacteria 5525737
305 2842174238 2842170452 Bacteria 5525737
306 2842178429 2842175837 Bacteria 4908771
307 2842179423 2842175837 Bacteria 4908771
308 2842184213 2842180545 Bacteria 6888678
309 2842190280 2842187318 Bacteria 5524014
310 2842190943 2842187318 Bacteria 5524014
311 2842214594 2842211629 Bacteria 5523832
312 2842215258 2842211629 Bacteria 5523832
313 2842221625 2842217011 Bacteria 7497767
314 2842227313 2842224351 Bacteria 5524473
315 2842228103 2842224351 Bacteria 5524473
316 2842231795 2842229732 Bacteria 7475766
317 2842250616 2842243621 Bacteria 7421798
318 2842264482 2842257432 Bacteria 7401195
319 2842274908 2842271015 Bacteria 7807131
320 2842485445 2842482326 Bacteria 7212537
321 2842518353 2842515876 Bacteria 5436280
322 2842520309 2842515876 Bacteria 5436280
323 2844169638 2844163670 Bacteria 7266046
324 2844460431 2844454524 Bacteria 7952546
325 2857517991 2857516855 Bacteria 7787325
326 2881646867 2881644220 Bacteria 5302661
327 2889791798 2889790730 Bacteria 5689708
328 2894773992 2894772417 Bacteria 5305674
329 2899796423 2899792073 Bacteria 4926588
330 2899804709 2899803654 Bacteria 5577784
331 2899849966 2899845264 Bacteria 5672268
332 2919117430 2919114240 Bacteria 5700270
333 2919168963 2919166419 Bacteria 4952238
334 2926758877 2926754445 Bacteria 5964435
335 2926763612 2926760298 Bacteria 5505990
336 2928511019 2928510474 Bacteria 4815308
337 2929143470 2929138655 Bacteria 5810547
338 2933009809 2933006813 Bacteria 4912075
339 2933010952 2933006813 Bacteria 4912075
340 2933013980 2933011516 Bacteria 5439334
341 2933016001 2933011516 Bacteria 5439334
342 2933592987 2933586486 Bacteria 7667493
343 2933596129 2933594066 Bacteria 5594265
344 2935903197 2935901341 Bacteria 7341747
345 2941504446 2941499720 Bacteria 7599444
346 2978970077 2978969890 Bacteria 5400756
347 2978971708 2978969890 Bacteria 5400756
348 2979091349 2979089926 Bacteria 5670289
349 2979096872 2979095461 Bacteria 5669583
350 2979101459 2979100975 Bacteria 5423623
351 2984510590 2984509177 Bacteria 5274802
352 2984518706 2984518228 Bacteria 5277463
353 2984538940 2984537506 Bacteria 5277481
354 2984587097 2984587000 Bacteria 5263363
355 2984588850 2984587000 Bacteria 5263363
356 2984605634 2984601300 Bacteria 5455244
357 3001271125 3001267043 Bacteria 4823521
358 3001276747 3001272096 Bacteria 4729684
359 3005423504 3005416602 Bacteria 7064308
360 3006991497 3006988479 Bacteria 4767936
361 650843081 650716007 Bacteria 5573770
362 8005307966 8005307578 Bacteria 7395396
363 8005321052 8005314921 Bacteria 7072929
364 8005683680 8005682033 Bacteria 6726518
365 8018154139 8018150411 Bacteria 5549903
366 8055435353 8055431914 Bacteria 4551896
367 8057878053 8057874678 Bacteria 7494653
368 Ga0075430_100030173
369 JGI25162J39368_1001185
370 JGI25158J39367_1002866
371 JGI25152J39213_1000315
372 JGI25152J39213_1001113
373 JGI25159J45721_1000043
374 JGI25165J46597_1000263
375 JGI25153J46596_10000363
376 JGI25153J46596_10001846
377 rootH1_10015153
378 JGI25160J50197_1000144
379 JGI25161J50226_1000601
380 Ga0058692_1001242
381 Ga0055543_1000200
382 Ga0065165_1000461
383 Ga0065714_10002843
384 Ga0070666_10014166
385 Ga0070667_100003178
386 Ga0070667_100043213
387 Ga0070665_100020344
388 Ga0070665_100196493
389 Ga0068860_100001411
390 Ga0068862_100004553
391 Ga0081455_10003083
392 Ga0081538_10004326
393 Ga0081539_10000219
394 Ga0075364_10000758
395 Ga0075364_10001033
396 Ga0075366_10027956
397 Ga0075370_10004164
398 Ga0075428_100009440
399 Ga0075429_100045690
400 Ga0099826_10018532
401 Ga0111539_10017612
402 Ga0105245_10203197
403 Ga0114129_10012400
404 Ga0105243_10000150
405 Ga0105238_10013029
406 Ga0105249_10004309
407 Ga0105239_10013060
408 Ga0157373_10007815
409 Ga0157371_10000002
410 Ga0157370_10000269
411 Ga0157370_10042339
412 Ga0157369_10044062
413 Ga0157379_10179314
414 Ga0213872_10001530
415 Ga0209436_101502
416 Ga0209437_100104
417 Ga0207425_1000858
418 Ga0209129_1000426
419 Ga0209129_1000884
420 Ga0209233_1000054
421 Ga0209130_1000274
422 Ga0209025_1000925
423 Ga0209025_1001358
424 Ga0209025_1013323
425 Ga0209758_1000875
426 Ga0209758_1003054
427 Ga0209758_1003279
428 Ga0207426_1000460
429 Ga0207681_10073276
430 Ga0207709_10000005
431 Ga0207712_10031100
432 Ga0207658_10002171
433 Ga0207658_10050230
434 Ga0209371_1000012
435 Ga0209371_1001161
436 Ga0209371_1001251
437 Ga0209371_1001440
438 Ga0209282_1000154
439 Ga0209282_1008240
440 Ga0268266_10014054
441 Ga0268266_10061484
442 Ga0268266_10130799
443 Ga0268264_10000122
444 Ga0268256_1000013
445 Ga0268256_1000992
446 Ga0268256_1004579
447 Ga0307509_10000003
448 Ga0307415_100008486
449 Ga0307510_10000005
450 Ga0307510_10000012
451 Ga0373953_0001311
452 Ga0373956_0054108
453 Ga0373957_0040727
454 Ga0373933_0002518
455 Ga0373937_0016702
456 Ga0373937_0208685
457 Ga0395898_0019892
458 Ga0436364_0370576
459 Ga0395901_0006152
460 Ga0400489_67773
461 Ga0436365_0108213
462 Ga0436365_0730098
463 Ga0436360_0079975
464 Ga0436361_0632832
465 Ga0466971_0053752
466 Ga0466967_0030739
467 Ga0466967_0044698
468 Ga0495617_000066
469 Ga0495629_0103685
470 Ga0495638_0001051
471 Ga0495580_0004853
472 Ga0495585_0033023
473 Ga0495607_0013575
474 Ga0495583_0004874
475 Ga0495583_0038623
476 Ga0495606_0014386
477 Ga0495620_0001834
478 Ga0495631_0006486
479 Ga0495632_0000078
480 Ga0495632_0007501
481 Ga0495663_0000421
482 Ga0495663_0000906
483 Ga0495654_0000533
484 Ga0495654_0003801
485 Ga0495654_0004455
486 Ga0495668_0005080
487 Ga0495668_0005264
488 Ga0495668_0015288
489 Ga0495625_0001234
490 Ga0495588_0000820
491 Ga0495588_0002762
492 Ga0495613_0042418
493 Ga0495613_0105069
494 Ga0495671_0032691
495 Ga0495649_0012560
496 Ga0495660_0018365
497 Ga0495660_0044504
498 Ga0495680_0065234
499 Ga0495687_001599
500 Ga0495687_023230
501 Ga0495673_0000113
502 Ga0495681_0032318
503 Ga0495686_0012975
504 Ga0496102_0003227
505 Ga0496102_0010294
506 Ga0496104_0115384
507 Ga0496105_0032016
508 Ga0496106_0000729
509 Ga0496113_0138297
510 Ga0496115_0007813
511 Ga0496116_0000049
512 Ga0496116_0000216
513 Ga0496116_0026713
514 Ga0496116_0052213
515 Ga0496116_0091964
516 Ga0496117_0000012
517 Ga0496117_0000016
518 Ga0496117_0007126
519 Ga0496118_0000051
520 Ga0496118_0002299
521 Ga0496118_0030386
522 Ga0496119_0012377
523 Ga0496119_0055483
524 Ga0496119_0060148
525 Ga0496120_0000660
526 Ga0496120_0008810
527 Ga0496121_0000005
528 Ga0496121_0005387
529 Ga0496121_0015281
530 Ga0496121_0159160
531 Ga0496122_0000002
532 Ga0496122_0000195
533 Ga0496122_0019125
534 Ga0496123_0000002
535 Ga0496123_0000153
536 Ga0496123_0018647
537 Ga0496123_0021266
538 Ga0496124_0000574
539 Ga0496125_0000449
540 Ga0496125_0057177
541 Ga0496125_0129517
542 Ga0496126_0000081
543 Ga0495678_004651
544 Ga0501031_0000234
545 Ga0501032_0006588
546 Ga0501033_0001980
547 Ga0501034_0003346
548 Ga0501036_0000368
549 Ga0501037_0000043
550 Ga0501040_0004694
551 Ga0501043_0000169
552 Ga0501047_0002029
553 Ga0501047_0020184
554 Ga0501070_0001123
555 Ga0501074_0006437
556 Ga0501035_0011021
557 Ga0501044_0001107
558 Ga0501045_0007790
559 nmdc:mga00v17_21_c1
560 nmdc:mga00v17_3_c1
561 nmdc:mga0yw44_24638_c1
562 nmdc:mga06z11_57274_c1
563 nmdc:mga07m45_29849_c1
564 nmdc:mga05p37_30627_c1
565 nmdc:mga05p37_87641_c1
566 nmdc:mga09592_95670_c1
567 nmdc:mga0qj67_27200_c1
568 nmdc:mga0sz30_20456_c1
569 Ga0500578_0018699
570 Ga0500644_0001675
571 Ga0500557_013262
572 Ga0500592_000010
573 Ga0500592_000081
574 Ga0500592_000165
575 Ga0500608_003469
576 Ga0500618_001005
577 Ga0500618_002311
578 Ga0500658_0001615
579 Ga0500658_0003154
580 Ga0500561_0000162
581 Ga0500568_0000553
582 Ga0500573_0011165
583 Ga0500616_0000011
584 Ga0500616_0001757
585 Ga0500622_0000393
586 Ga0500622_0004684
587 Ga0500627_0000036
588 Ga0500627_0000039
589 Ga0500627_0000166
590 Ga0500627_0000373
591 Ga0500627_0005012
592 Ga0500634_0002952
593 Ga0500636_0000007
594 Ga0500636_0001818
595 Ga0500661_000038
596 Ga0530510_0001794
597 Ga0530510_0096405
598 2501077835
599 2511092199
600 2511131556
601 2511186312
602 2511335710
603 2513578420
604 2513711119
605 2513913373
606 2515645167
607 2515738150
608 2517041162
609 2517080207
610 2537875062
611 2537877442
612 2554245511
613 2558905871
614 2559296659
615 2585169547
616 2585232207
617 2585275023
618 2585332975
619 2585525547
620 2585561263
621 2585901785
622 2585908143
623 2587983822
624 2599602851
625 2599604744
626 2601611841
627 2601749657
628 2616552895
629 2617381329
630 2623590473
631 2643729700
632 2643854626
633 2643917371
634 2644044060
635 2644104810
636 2644151241
637 2644313229
638 2644336315
639 2644392529
640 2644520787
641 2644547151
642 2644612852
643 2766065071
644 2778174528
645 2808987112
646 2819560586
647 2838666582
648 2838677922
649 2838679040
650 2838690777
651 2838717172
652 2838717992
653 2838722217
654 2838723338
655 2838727921
656 2838728708
657 2838736676
658 2838749638
659 2841849579
660 2841858302
661 2841861380
662 2841863526
663 2842116771
664 2842127673
665 2842132815
666 2842133809
667 2842154808
668 2842155927
669 2842160597
670 2842164096
671 2842173307
672 2842174238
673 2842178429
674 2842179423
675 2842184213
676 2842190280
677 2842190943
678 2842214594
679 2842215258
680 2842221625
681 2842227313
682 2842228103
683 2842231795
684 2842250616
685 2842264482
686 2842274908
687 2842485445
688 2842518353
689 2842520309
690 2844169638
691 2844460431
692 2857517991
693 2881646867
694 2889791798
695 2894773992
696 2899796423
697 2899804709
698 2899849966
699 2919117430
700 2919168963
701 2926758877
702 2926763612
703 2928511019
704 2929143470
705 2933009809
706 2933010952
707 2933013980
708 2933016001
709 2933592987
710 2933596129
711 2935903197
712 2941504446
713 2978970077
714 2978971708
715 2979091349
716 2979096872
717 2979101459
718 2984510590
719 2984518706
720 2984538940
721 2984587097
722 2984588850
723 2984605634
724 3001271125
725 3001276747
726 3005423504
727 3006991497
728 650843081
729 8005307966
730 8005321052
731 8005683680
732 8018154139
733 8055435353
734 8057878053

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05378

Hydant_A_N

Hydantoinase/oxoprolinase N-terminal region

5

175

0.97

PF01968

Hydantoinase_A

Hydantoinase/oxoprolinase

194

413

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4y0w-assembly1.cif.gz_B-2 yeaz from pseudomonas aeruginosa 0.8032 2 63
4y0w-assembly1.cif.gz_C-2 yeaz from pseudomonas aeruginosa 0.7871 2 63
5l9w-assembly2.cif.gz_b crystal structure of the apc core complex 0.7634 1 493
6yra-assembly2.cif.gz_C crystal structure of atp-dependent caprolactamase from pseudomonas jessenii 0.762 3 490
5l9w-assembly2.cif.gz_b crystal structure of the apc core complex 0.7599 1 493
ID Description Score Start End Superfamily
1huxB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8889 1 64 3.30.420.40
af_I1JIZ2_42_149_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.887 2 65 3.30.420.40
af_Q9VZV9_30_306_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8842 1 65 3.30.420.40
4ehtB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8807 1 64 3.30.420.40
af_A4IAE4_5_196_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8429 259 305 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A7Y5XGR5-F1-model_v4 deleted 0.9796 1 226
AF-A0A537QPY8-F1-model_v4 Hydantoinase/oxoprolinase family protein 0.9794 181 310 GO:0016787
AF-A0A2V7A724-F1-model_v4 Hydantoinase 0.9763 2 232 GO:0016787
AF-A0A7C2W5Y1-F1-model_v4 Hydantoinase/oxoprolinase family protein 0.9763 3 229 GO:0016787
AF-A0A7C7NZK5-F1-model_v4 Hydantoinase/oxoprolinase family protein 0.9726 3 241 GO:0016787

Map