F425010

General Info

Members Datasets Scaffolds Average Seq Length
369 160 738 286

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10226534|Ga0105240_102265342
Length 333
Sequence VVAIVAVILIVFMRQSSCPGILPAPFPMTGFCSVLTFFSRSPGILLPYRKILTVKIQKEIVLPDPGQSFKLFTPSLKNYFYWHYHPEYELVYVEAITGIRHVGQHISSFTDSDLVLIGPNIPHLNFDYGIETEYHQIVVQLRENFLGDAFQQTPEFDKIRRLFARAYLGISFGGETKTAVAEILKQMQSLTHFDQLIRLLEVFQLLATSTGSQELNQQDTSIKLFLDDKIRMGAIYKYIHANYDRSPDVNVIAANVHMSTAAFCRYFKKQTNMTFTDFVNQYRITQARTLLLKGLSVTEVCYEVGFQSLSYFNKLFRRLIGENPSVFKKTART

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
20 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
88 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
89 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
90 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
91 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
136 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
140 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
141 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
142 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
143 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
144 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
145 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
146 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
147 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
148 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
149 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
150 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
151 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
152 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
153 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
154 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
155 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
156 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
157 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.46
Metatranscriptomes 0.27
Isolates 0.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.71
Nodule 0
Rhizoplane 0
Rhizosphere 93.22
Stem 0
Stem Tuber 0
Unclassified 10.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10226534 3300009093 Bacteria 2175
2 JGI25162J39368_1001507 3300002737 Bacteria 12120
3 JGI25165J46597_1000461 3300003214 Bacteria 40249
4 rootH2_10014314 3300003320 Bacteria 13432
5 rootH2_10015257 3300003320 Bacteria 43291
6 rootH2_10041661 3300003320 Bacteria 3986
7 rootH2_10047514 3300003320 Bacteria 4050
8 rootL2_10194370 3300003322 Bacteria 1692
9 rootH1_10037561 3300003323 Bacteria 2044
10 rootH1_10068538 3300003323 Bacteria 2736
11 rootH1_10070897 3300003323 Bacteria 1577
12 JGI25160J50197_1001472 3300003354 Bacteria 11732
13 Ga0055531_10000063 3300003794 Bacteria 119938
14 Ga0065707_10238986 3300005295 Bacteria 1162
15 Ga0070658_10003829 3300005327 Bacteria 12330
16 Ga0070658_10102531 3300005327 Bacteria 2366
17 Ga0070658_10299357 3300005327 Bacteria 1371
18 Ga0070676_10002204 3300005328 Bacteria 9937
19 Ga0070676_10044693 3300005328 Bacteria 2579
20 Ga0070683_100003080 3300005329 Bacteria 13425
21 Ga0070683_100035929 3300005329 Bacteria 4532
22 Ga0070670_100017311 3300005331 Bacteria 6182
23 Ga0068869_100012324 3300005334 Bacteria 5648
24 Ga0068869_100076486 3300005334 Bacteria 2488
25 Ga0068869_100077115 3300005334 Bacteria 2478
26 Ga0068869_100095463 3300005334 Unclassified 2244
27 Ga0068869_100298773 3300005334 Unclassified 1299
28 Ga0070666_10000132 3300005335 Bacteria 52718
29 Ga0070666_10000237 3300005335 Bacteria 37366
30 Ga0070680_100055743 3300005336 Bacteria 3230
31 Ga0070680_100177862 3300005336 Bacteria 1791
32 Ga0070680_100494491 3300005336 Bacteria 1046
33 Ga0068868_100002108 3300005338 Bacteria 13707
34 Ga0068868_100363373 3300005338 Unclassified 1242
35 Ga0070660_100000800 3300005339 Bacteria 20862
36 Ga0070691_10011018 3300005341 Bacteria 4129
37 Ga0070691_10131066 3300005341 Bacteria 1271
38 Ga0070687_100325859 3300005343 Bacteria 983
39 Ga0070668_100001567 3300005347 Bacteria 16516
40 Ga0070668_100037957 3300005347 Bacteria 3680
41 Ga0070668_100229989 3300005347 Bacteria 1532
42 Ga0070668_100306683 3300005347 Bacteria 1333
43 Ga0070669_100001679 3300005353 Bacteria 16024
44 Ga0070675_100015705 3300005354 Bacteria 5991
45 Ga0070671_100597644 3300005355 Bacteria 953
46 Ga0070674_100186746 3300005356 Bacteria 1591
47 Ga0070673_100025034 3300005364 Bacteria 4385
48 Ga0070673_100346672 3300005364 Unclassified 1317
49 Ga0070688_100008157 3300005365 Bacteria 5675
50 Ga0070667_100002861 3300005367 Bacteria 14892
51 Ga0070667_100037371 3300005367 Bacteria 4070
52 Ga0070667_100119056 3300005367 Bacteria 2296
53 Ga0070667_100128050 3300005367 Bacteria 2214
54 Ga0070667_100175579 3300005367 Bacteria 1893
55 Ga0070700_100039687 3300005441 Bacteria 2877
56 Ga0070663_100132358 3300005455 Unclassified 1895
57 Ga0070663_100148279 3300005455 Bacteria 1797
58 Ga0070678_100195288 3300005456 Unclassified 1667
59 Ga0070662_100002464 3300005457 Bacteria 11394
60 Ga0070662_100125384 3300005457 Bacteria 1973
61 Ga0070681_10082858 3300005458 Bacteria 3162
62 Ga0070681_10479214 3300005458 Bacteria 1157
63 Ga0068867_100066629 3300005459 Bacteria 2683
64 Ga0068867_100125239 3300005459 Bacteria 1990
65 Ga0070679_100193905 3300005530 Bacteria 1999
66 Ga0070679_100592046 3300005530 Bacteria 1052
67 Ga0070684_100004455 3300005535 Bacteria 10670
68 Ga0068853_100001682 3300005539 Bacteria 16193
69 Ga0068853_100007982 3300005539 Bacteria 8488
70 Ga0068853_100148204 3300005539 Bacteria 2111
71 Ga0068853_100658281 3300005539 Unclassified 997
72 Ga0068853_100769260 3300005539 Bacteria 921
73 Ga0070672_100000578 3300005543 Bacteria 21555
74 Ga0070672_100191621 3300005543 Bacteria 1707
75 Ga0070693_100009128 3300005547 Bacteria 4923
76 Ga0070665_100001994 3300005548 Bacteria 22953
77 Ga0068855_100001263 3300005563 Bacteria 31398
78 Ga0068855_100037478 3300005563 Bacteria 5765
79 Ga0068855_100064506 3300005563 Bacteria 4272
80 Ga0068855_100113469 3300005563 Unclassified 3108
81 Ga0068855_100154450 3300005563 Bacteria 2608
82 Ga0068855_100197934 3300005563 Unclassified 2263
83 Ga0068855_100545018 3300005563 Unclassified 1256
84 Ga0070664_100063040 3300005564 Bacteria 3161
85 Ga0070664_100327223 3300005564 Unclassified 1390
86 Ga0068857_100011100 3300005577 Bacteria 7837
87 Ga0068857_100252704 3300005577 Bacteria 1616
88 Ga0068854_100036288 3300005578 Bacteria 3456
89 Ga0068854_100079396 3300005578 Bacteria 2419
90 Ga0068854_100186694 3300005578 Bacteria 1622
91 Ga0068856_100156698 3300005614 Bacteria 2287
92 Ga0068852_100000197 3300005616 Bacteria 41267
93 Ga0068852_100123185 3300005616 Bacteria 2377
94 Ga0068852_100744327 3300005616 Bacteria 992
95 Ga0068852_100905973 3300005616 Unclassified 899
96 Ga0068859_100000003 3300005617 Bacteria 479218
97 Ga0068859_100101246 3300005617 Bacteria 2938
98 Ga0068859_100153866 3300005617 Bacteria 2376
99 Ga0068864_100010954 3300005618 Bacteria 7497
100 Ga0068864_100015277 3300005618 Bacteria 6385
101 Ga0068864_100091572 3300005618 Bacteria 2683
102 Ga0068861_100004026 3300005719 Bacteria 9841
103 Ga0068861_100011950 3300005719 Bacteria 6047
104 Ga0068861_100182971 3300005719 Bacteria 1746
105 Ga0068851_10002453 3300005834 Bacteria 8143
106 Ga0068851_10013834 3300005834 Bacteria 3822
107 Ga0068870_10323625 3300005840 Unclassified 980
108 Ga0068863_100002063 3300005841 Bacteria 19918
109 Ga0068858_100002173 3300005842 Bacteria 19881
110 Ga0068858_100002291 3300005842 Bacteria 19382
111 Ga0068860_100000621 3300005843 Bacteria 41951
112 Ga0068860_100003042 3300005843 Bacteria 17317
113 Ga0068860_100004276 3300005843 Bacteria 14608
114 Ga0068860_100026840 3300005843 Bacteria 5549
115 Ga0068860_100246023 3300005843 Unclassified 1740
116 Ga0068860_100413105 3300005843 Bacteria 1337
117 Ga0068862_100009949 3300005844 Bacteria 7856
118 Ga0068862_100040825 3300005844 Bacteria 3946
119 Ga0068862_100320288 3300005844 Unclassified 1431
120 Ga0068862_100445006 3300005844 Unclassified 1220
121 Ga0081540_1002846 3300005983 Bacteria 14016
122 Ga0097621_100094763 3300006237 Bacteria 2503
123 Ga0097621_100301182 3300006237 Bacteria 1416
124 Ga0097621_100381139 3300006237 Unclassified 1259
125 Ga0068871_100002581 3300006358 Bacteria 12362
126 Ga0068871_100002895 3300006358 Bacteria 11778
127 Ga0068865_100001115 3300006881 Bacteria 15513
128 Ga0068865_100048206 3300006881 Bacteria 2931
129 Ga0068865_100269015 3300006881 Bacteria 1352
130 Ga0097620_100000003 3300006931 Bacteria 479218
131 Ga0097620_100101242 3300006931 Bacteria 2938
132 Ga0097620_100153868 3300006931 Bacteria 2376
133 Ga0105240_10000063 3300009093 Bacteria 215936
134 Ga0105240_10000071 3300009093 Bacteria 204197
135 Ga0105240_10020998 3300009093 Bacteria 8692
136 Ga0105240_10025938 3300009093 Bacteria 7697
137 Ga0105240_10048622 3300009093 Bacteria 5359
138 Ga0105240_10049878 3300009093 Bacteria 5280
139 Ga0105240_10135775 3300009093 Bacteria 2946
140 Ga0105240_10508415 3300009093 Bacteria 1339
141 Ga0111539_10005747 3300009094 Bacteria 16038
142 Ga0111539_10108858 3300009094 Bacteria 3252
143 Ga0105245_10197219 3300009098 Bacteria 1932
144 Ga0105247_10002140 3300009101 Bacteria 13643
145 Ga0105241_10000240 3300009174 Bacteria 41530
146 Ga0105241_10016359 3300009174 Bacteria 5440
147 Ga0105242_10048411 3300009176 Bacteria 3455
148 Ga0105242_10052996 3300009176 Bacteria 3311
149 Ga0105242_10409470 3300009176 Bacteria 1268
150 Ga0105237_10002293 3300009545 Bacteria 23780
151 Ga0105237_10002674 3300009545 Bacteria 21871
152 Ga0105237_10013534 3300009545 Bacteria 8550
153 Ga0105237_10041054 3300009545 Bacteria 4667
154 Ga0105237_10073562 3300009545 Bacteria 3410
155 Ga0105237_10103119 3300009545 Bacteria 2844
156 Ga0105237_10377717 3300009545 Bacteria 1422
157 Ga0105238_10033191 3300009551 Bacteria 5253
158 Ga0105238_10073716 3300009551 Bacteria 3408
159 Ga0105238_10140533 3300009551 Bacteria 2392
160 Ga0105249_10004584 3300009553 Bacteria 11943
161 Ga0105249_10085624 3300009553 Bacteria 2937
162 Ga0105249_10285352 3300009553 Unclassified 1650
163 Ga0105249_10341750 3300009553 Unclassified 1514
164 Ga0105239_10000119 3300010375 Bacteria 111612
165 Ga0105239_10000642 3300010375 Bacteria 49706
166 Ga0105239_10009934 3300010375 Bacteria 10684
167 Ga0105239_10012566 3300010375 Bacteria 9426
168 Ga0105239_10013502 3300010375 Bacteria 9068
169 Ga0105239_10016202 3300010375 Bacteria 8246
170 Ga0105239_10044545 3300010375 Bacteria 4863
171 Ga0105246_10012371 3300011119 Bacteria 5322
172 Ga0105246_10017931 3300011119 Bacteria 4506
173 Ga0105246_10031304 3300011119 Bacteria 3520
174 Ga0157373_10002565 3300013100 Bacteria 13803
175 Ga0157373_10006937 3300013100 Bacteria 8433
176 Ga0157373_10072341 3300013100 Bacteria 2434
177 Ga0157371_10002378 3300013102 Bacteria 17997
178 Ga0157371_10104778 3300013102 Bacteria 2007
179 Ga0157371_10279201 3300013102 Bacteria 1206
180 Ga0157370_10009749 3300013104 Bacteria 10198
181 Ga0157370_10021907 3300013104 Bacteria 6364
182 Ga0157370_10034916 3300013104 Bacteria 4893
183 Ga0157369_10035573 3300013105 Bacteria 5460
184 Ga0157369_10095342 3300013105 Bacteria 3175
185 Ga0157369_10127246 3300013105 Unclassified 2700
186 Ga0157374_10000042 3300013296 Bacteria 147627
187 Ga0157374_10000704 3300013296 Bacteria 29354
188 Ga0157374_10455118 3300013296 Bacteria 1281
189 Ga0157378_10003969 3300013297 Bacteria 13068
190 Ga0157378_10050033 3300013297 Bacteria 3718
191 Ga0163162_10000091 3300013306 Bacteria 83663
192 Ga0163162_10003888 3300013306 Bacteria 14336
193 Ga0163162_10004070 3300013306 Bacteria 14033
194 Ga0157372_10002596 3300013307 Bacteria 19560
195 Ga0157372_10007279 3300013307 Bacteria 11785
196 Ga0157372_10016947 3300013307 Bacteria 7822
197 Ga0157372_10042079 3300013307 Bacteria 5052
198 Ga0157372_10104295 3300013307 Bacteria 3241
199 Ga0157372_10245796 3300013307 Unclassified 2076
200 Ga0157375_10000133 3300013308 Bacteria 74352
201 Ga0157375_10257681 3300013308 Bacteria 1906
202 Ga0163163_10000046 3300014325 Bacteria 133543
203 Ga0163163_10000432 3300014325 Bacteria 38603
204 Ga0163163_10248686 3300014325 Bacteria 1828
205 Ga0163163_10256572 3300014325 Unclassified 1799
206 Ga0163163_10540257 3300014325 Bacteria 1228
207 Ga0157380_10024442 3300014326 Bacteria 4574
208 Ga0157380_10138841 3300014326 Bacteria 2085
209 Ga0157380_10536611 3300014326 Bacteria 1144
210 Ga0157380_10658534 3300014326 Bacteria 1046
211 Ga0157377_10089457 3300014745 Bacteria 1815
212 Ga0157379_10000020 3300014968 Bacteria 92868
213 Ga0157376_10000055 3300014969 Bacteria 98480
214 Ga0157376_10006019 3300014969 Bacteria 8527
215 Ga0157376_10019608 3300014969 Bacteria 5217
216 Ga0163161_10049008 3300017792 Bacteria 3051
217 Ga0163161_10075677 3300017792 Bacteria 2471
218 Ga0206352_10774589 3300020078 Bacteria 1625
219 Ga0213876_10006282 3300021384 Bacteria 6472
220 Ga0207427_100277 3300025231 Bacteria 38224
221 Ga0209437_100010 3300025233 Bacteria 838447
222 Ga0209233_1000017 3300025261 Bacteria 898076
223 Ga0207426_1000002 3300025302 Bacteria 1249660
224 Ga0209257_1000008 3300025304 Bacteria 1294570
225 Ga0207697_10021316 3300025315 Bacteria 2653
226 Ga0207656_10001200 3300025321 Bacteria 8541
227 Ga0207680_10000014 3300025903 Bacteria 179035
228 Ga0207680_10018389 3300025903 Unclassified 3715
229 Ga0207680_10018730 3300025903 Bacteria 3688
230 Ga0207680_10236952 3300025903 Unclassified 1256
231 Ga0207645_10000893 3300025907 Bacteria 24730
232 Ga0207645_10004661 3300025907 Bacteria 10101
233 Ga0207645_10218525 3300025907 Unclassified 1256
234 Ga0207643_10030018 3300025908 Bacteria 3024
235 Ga0207643_10116215 3300025908 Bacteria 1580
236 Ga0207705_10008306 3300025909 Bacteria 7582
237 Ga0207705_10091062 3300025909 Bacteria 2233
238 Ga0207705_10098889 3300025909 Bacteria 2144
239 Ga0207705_10456543 3300025909 Bacteria 991
240 Ga0207654_10007049 3300025911 Bacteria 5661
241 Ga0207654_10053630 3300025911 Bacteria 2328
242 Ga0207695_10000068 3300025913 Bacteria 324859
243 Ga0207695_10000133 3300025913 Bacteria 222573
244 Ga0207695_10000241 3300025913 Bacteria 142030
245 Ga0207695_10031472 3300025913 Bacteria 5817
246 Ga0207695_10038128 3300025913 Bacteria 5178
247 Ga0207695_10096718 3300025913 Bacteria 2954
248 Ga0207695_10122049 3300025913 Bacteria 2572
249 Ga0207695_10150494 3300025913 Bacteria 2267
250 Ga0207671_10003515 3300025914 Bacteria 15561
251 Ga0207671_10010405 3300025914 Bacteria 7677
252 Ga0207671_10012702 3300025914 Bacteria 6755
253 Ga0207671_10013945 3300025914 Bacteria 6378
254 Ga0207671_10070319 3300025914 Bacteria 2609
255 Ga0207671_10270410 3300025914 Bacteria 1339
256 Ga0207671_10320653 3300025914 Bacteria 1226
257 Ga0207660_10007186 3300025917 Bacteria 7208
258 Ga0207662_10322159 3300025918 Bacteria 1032
259 Ga0207657_10005924 3300025919 Bacteria 12726
260 Ga0207657_10079784 3300025919 Bacteria 2753
261 Ga0207657_10210570 3300025919 Bacteria 1560
262 Ga0207652_10015549 3300025921 Bacteria 6190
263 Ga0207652_10273641 3300025921 Bacteria 1523
264 Ga0207694_10051883 3300025924 Bacteria 3179
265 Ga0207694_10211868 3300025924 Bacteria 1578
266 Ga0207694_10313024 3300025924 Bacteria 1294
267 Ga0207650_10188868 3300025925 Bacteria 1645
268 Ga0207659_10082315 3300025926 Bacteria 2383
269 Ga0207659_10359865 3300025926 Unclassified 1209
270 Ga0207706_10018259 3300025933 Bacteria 6311
271 Ga0207706_10045122 3300025933 Bacteria 3906
272 Ga0207706_10156638 3300025933 Bacteria 2003
273 Ga0207706_10312946 3300025933 Bacteria 1367
274 Ga0207686_10140392 3300025934 Bacteria 1669
275 Ga0207704_10001384 3300025938 Bacteria 10858
276 Ga0207691_10000013 3300025940 Bacteria 147349
277 Ga0207691_10061840 3300025940 Bacteria 3400
278 Ga0207689_10001979 3300025942 Bacteria 19346
279 Ga0207689_10024555 3300025942 Bacteria 5056
280 Ga0207689_10036287 3300025942 Bacteria 4093
281 Ga0207689_10037308 3300025942 Bacteria 4031
282 Ga0207661_10011203 3300025944 Bacteria 6487
283 Ga0207661_10027791 3300025944 Bacteria 4326
284 Ga0207679_10044642 3300025945 Bacteria 3199
285 Ga0207679_10303193 3300025945 Unclassified 1378
286 Ga0207667_10000629 3300025949 Bacteria 45587
287 Ga0207667_10001830 3300025949 Bacteria 26721
288 Ga0207667_10027516 3300025949 Bacteria 6187
289 Ga0207667_10030577 3300025949 Bacteria 5825
290 Ga0207667_10252313 3300025949 Bacteria 1805
291 Ga0207651_10263266 3300025960 Unclassified 1417
292 Ga0207712_10019613 3300025961 Bacteria 4420
293 Ga0207712_10057535 3300025961 Bacteria 2744
294 Ga0207712_10091234 3300025961 Bacteria 2244
295 Ga0207712_10152279 3300025961 Bacteria 1788
296 Ga0207712_10202067 3300025961 Unclassified 1576
297 Ga0207668_10000146 3300025972 Bacteria 48361
298 Ga0207668_10038439 3300025972 Bacteria 3212
299 Ga0207668_10308771 3300025972 Bacteria 1308
300 Ga0207640_10087191 3300025981 Bacteria 2151
301 Ga0207640_10132324 3300025981 Archaea 1805
302 Ga0207640_10479192 3300025981 Bacteria 1032
303 Ga0207658_10000188 3300025986 Bacteria 66426
304 Ga0207658_10040720 3300025986 Bacteria 3360
305 Ga0207658_10142938 3300025986 Bacteria 1939
306 Ga0207658_10151268 3300025986 Bacteria 1891
307 Ga0207677_10000973 3300026023 Bacteria 15857
308 Ga0207677_10394353 3300026023 Bacteria 1172
309 Ga0207677_10404240 3300026023 Bacteria 1159
310 Ga0207677_10456276 3300026023 Unclassified 1096
311 Ga0207703_10000602 3300026035 Bacteria 36552
312 Ga0207703_10025936 3300026035 Bacteria 4612
313 Ga0207639_10064829 3300026041 Bacteria 2833
314 Ga0207639_10106670 3300026041 Bacteria 2274
315 Ga0207678_10015676 3300026067 Bacteria 6661
316 Ga0207708_10049876 3300026075 Bacteria 3188
317 Ga0207702_10051421 3300026078 Unclassified 3482
318 Ga0207702_10256442 3300026078 Bacteria 1645
319 Ga0207702_10320657 3300026078 Bacteria 1475
320 Ga0207641_10000015 3300026088 Bacteria 321332
321 Ga0207641_10006978 3300026088 Bacteria 9448
322 Ga0207648_10000881 3300026089 Bacteria 33841
323 Ga0207648_10076106 3300026089 Bacteria 2925
324 Ga0207648_10247668 3300026089 Bacteria 1588
325 Ga0207648_10364298 3300026089 Bacteria 1305
326 Ga0207676_10005081 3300026095 Bacteria 9307
327 Ga0207676_10021401 3300026095 Bacteria 4743
328 Ga0207676_10469620 3300026095 Bacteria 1189
329 Ga0207674_10110999 3300026116 Bacteria 2717
330 Ga0207674_10504626 3300026116 Bacteria 1169
331 Ga0207675_100000609 3300026118 Bacteria 34912
332 Ga0207675_100021483 3300026118 Bacteria 6012
333 Ga0207675_100044821 3300026118 Bacteria 4133
334 Ga0207683_10229830 3300026121 Unclassified 1691
335 Ga0207683_10370149 3300026121 Unclassified 1316
336 Ga0207698_10017949 3300026142 Bacteria 4811
337 Ga0207698_10098235 3300026142 Bacteria 2419
338 Ga0207698_10141083 3300026142 Bacteria 2076
339 Ga0207428_10070460 3300027907 Bacteria 2748
340 Ga0268266_10002302 3300028379 Bacteria 20718
341 Ga0268265_10021789 3300028380 Bacteria 4494
342 Ga0268264_10000870 3300028381 Bacteria 31976
343 Ga0268264_10002061 3300028381 Bacteria 17930
344 Ga0268264_10003631 3300028381 Bacteria 13269
345 Ga0268264_10051613 3300028381 Bacteria 3427
346 Ga0307515_10000031 3300028794 Bacteria 358648
347 Ga0307515_10002345 3300028794 Bacteria 41326
348 Ga0265327_10081976 3300031251 Unclassified 1591
349 Ga0307509_10075244 3300031507 Bacteria 3508
350 Ga0307509_10172495 3300031507 Bacteria 2040
351 Ga0307405_10009823 3300031731 Unclassified 4923
352 Ga0307413_10094874 3300031824 Unclassified 1954
353 Ga0307409_100073392 3300031995 Unclassified 2729
354 Ga0307416_100615080 3300032002 Bacteria 1168
355 Ga0307415_100057804 3300032126 Bacteria 2667
356 Ga0373927_0012623 3300035695 Bacteria 5620
357 Ga0395900_0304851 3300037418 Bacteria 1577
358 Ga0395901_0170878 3300038443 Bacteria 2281
359 Ga0436365_1057500 3300039437 Bacteria 6490
360 Ga0466961_0067145 3300044693 Bacteria 2278
361 Ga0466971_0122070 3300044719 Unclassified 1206
362 Ga0466959_0000827 3300045049 Bacteria 18248
363 Ga0466958_0027440 3300045836 Bacteria 3370
364 Ga0495650_0056107 3300046471 Unclassified 1600
365 Ga0495580_0062600 3300046472 Bacteria 2610
366 Ga0495611_0000050 3300046648 Bacteria 84026
367 Ga0496126_0006106 3300048929 Bacteria 13508
368 Ga0500622_0005528 3300053156 Bacteria 7560
369 2722728254 2721755487 Bacteria 6357185
370 Ga0105240_10226534
371 JGI25162J39368_1001507
372 JGI25165J46597_1000461
373 rootH2_10014314
374 rootH2_10015257
375 rootH2_10041661
376 rootH2_10047514
377 rootL2_10194370
378 rootH1_10037561
379 rootH1_10068538
380 rootH1_10070897
381 JGI25160J50197_1001472
382 Ga0055531_10000063
383 Ga0065707_10238986
384 Ga0070658_10003829
385 Ga0070658_10102531
386 Ga0070658_10299357
387 Ga0070676_10002204
388 Ga0070676_10044693
389 Ga0070683_100003080
390 Ga0070683_100035929
391 Ga0070670_100017311
392 Ga0068869_100012324
393 Ga0068869_100076486
394 Ga0068869_100077115
395 Ga0068869_100095463
396 Ga0068869_100298773
397 Ga0070666_10000132
398 Ga0070666_10000237
399 Ga0070680_100055743
400 Ga0070680_100177862
401 Ga0070680_100494491
402 Ga0068868_100002108
403 Ga0068868_100363373
404 Ga0070660_100000800
405 Ga0070691_10011018
406 Ga0070691_10131066
407 Ga0070687_100325859
408 Ga0070668_100001567
409 Ga0070668_100037957
410 Ga0070668_100229989
411 Ga0070668_100306683
412 Ga0070669_100001679
413 Ga0070675_100015705
414 Ga0070671_100597644
415 Ga0070674_100186746
416 Ga0070673_100025034
417 Ga0070673_100346672
418 Ga0070688_100008157
419 Ga0070667_100002861
420 Ga0070667_100037371
421 Ga0070667_100119056
422 Ga0070667_100128050
423 Ga0070667_100175579
424 Ga0070700_100039687
425 Ga0070663_100132358
426 Ga0070663_100148279
427 Ga0070678_100195288
428 Ga0070662_100002464
429 Ga0070662_100125384
430 Ga0070681_10082858
431 Ga0070681_10479214
432 Ga0068867_100066629
433 Ga0068867_100125239
434 Ga0070679_100193905
435 Ga0070679_100592046
436 Ga0070684_100004455
437 Ga0068853_100001682
438 Ga0068853_100007982
439 Ga0068853_100148204
440 Ga0068853_100658281
441 Ga0068853_100769260
442 Ga0070672_100000578
443 Ga0070672_100191621
444 Ga0070693_100009128
445 Ga0070665_100001994
446 Ga0068855_100001263
447 Ga0068855_100037478
448 Ga0068855_100064506
449 Ga0068855_100113469
450 Ga0068855_100154450
451 Ga0068855_100197934
452 Ga0068855_100545018
453 Ga0070664_100063040
454 Ga0070664_100327223
455 Ga0068857_100011100
456 Ga0068857_100252704
457 Ga0068854_100036288
458 Ga0068854_100079396
459 Ga0068854_100186694
460 Ga0068856_100156698
461 Ga0068852_100000197
462 Ga0068852_100123185
463 Ga0068852_100744327
464 Ga0068852_100905973
465 Ga0068859_100000003
466 Ga0068859_100101246
467 Ga0068859_100153866
468 Ga0068864_100010954
469 Ga0068864_100015277
470 Ga0068864_100091572
471 Ga0068861_100004026
472 Ga0068861_100011950
473 Ga0068861_100182971
474 Ga0068851_10002453
475 Ga0068851_10013834
476 Ga0068870_10323625
477 Ga0068863_100002063
478 Ga0068858_100002173
479 Ga0068858_100002291
480 Ga0068860_100000621
481 Ga0068860_100003042
482 Ga0068860_100004276
483 Ga0068860_100026840
484 Ga0068860_100246023
485 Ga0068860_100413105
486 Ga0068862_100009949
487 Ga0068862_100040825
488 Ga0068862_100320288
489 Ga0068862_100445006
490 Ga0081540_1002846
491 Ga0097621_100094763
492 Ga0097621_100301182
493 Ga0097621_100381139
494 Ga0068871_100002581
495 Ga0068871_100002895
496 Ga0068865_100001115
497 Ga0068865_100048206
498 Ga0068865_100269015
499 Ga0097620_100000003
500 Ga0097620_100101242
501 Ga0097620_100153868
502 Ga0105240_10000063
503 Ga0105240_10000071
504 Ga0105240_10020998
505 Ga0105240_10025938
506 Ga0105240_10048622
507 Ga0105240_10049878
508 Ga0105240_10135775
509 Ga0105240_10508415
510 Ga0111539_10005747
511 Ga0111539_10108858
512 Ga0105245_10197219
513 Ga0105247_10002140
514 Ga0105241_10000240
515 Ga0105241_10016359
516 Ga0105242_10048411
517 Ga0105242_10052996
518 Ga0105242_10409470
519 Ga0105237_10002293
520 Ga0105237_10002674
521 Ga0105237_10013534
522 Ga0105237_10041054
523 Ga0105237_10073562
524 Ga0105237_10103119
525 Ga0105237_10377717
526 Ga0105238_10033191
527 Ga0105238_10073716
528 Ga0105238_10140533
529 Ga0105249_10004584
530 Ga0105249_10085624
531 Ga0105249_10285352
532 Ga0105249_10341750
533 Ga0105239_10000119
534 Ga0105239_10000642
535 Ga0105239_10009934
536 Ga0105239_10012566
537 Ga0105239_10013502
538 Ga0105239_10016202
539 Ga0105239_10044545
540 Ga0105246_10012371
541 Ga0105246_10017931
542 Ga0105246_10031304
543 Ga0157373_10002565
544 Ga0157373_10006937
545 Ga0157373_10072341
546 Ga0157371_10002378
547 Ga0157371_10104778
548 Ga0157371_10279201
549 Ga0157370_10009749
550 Ga0157370_10021907
551 Ga0157370_10034916
552 Ga0157369_10035573
553 Ga0157369_10095342
554 Ga0157369_10127246
555 Ga0157374_10000042
556 Ga0157374_10000704
557 Ga0157374_10455118
558 Ga0157378_10003969
559 Ga0157378_10050033
560 Ga0163162_10000091
561 Ga0163162_10003888
562 Ga0163162_10004070
563 Ga0157372_10002596
564 Ga0157372_10007279
565 Ga0157372_10016947
566 Ga0157372_10042079
567 Ga0157372_10104295
568 Ga0157372_10245796
569 Ga0157375_10000133
570 Ga0157375_10257681
571 Ga0163163_10000046
572 Ga0163163_10000432
573 Ga0163163_10248686
574 Ga0163163_10256572
575 Ga0163163_10540257
576 Ga0157380_10024442
577 Ga0157380_10138841
578 Ga0157380_10536611
579 Ga0157380_10658534
580 Ga0157377_10089457
581 Ga0157379_10000020
582 Ga0157376_10000055
583 Ga0157376_10006019
584 Ga0157376_10019608
585 Ga0163161_10049008
586 Ga0163161_10075677
587 Ga0206352_10774589
588 Ga0213876_10006282
589 Ga0207427_100277
590 Ga0209437_100010
591 Ga0209233_1000017
592 Ga0207426_1000002
593 Ga0209257_1000008
594 Ga0207697_10021316
595 Ga0207656_10001200
596 Ga0207680_10000014
597 Ga0207680_10018389
598 Ga0207680_10018730
599 Ga0207680_10236952
600 Ga0207645_10000893
601 Ga0207645_10004661
602 Ga0207645_10218525
603 Ga0207643_10030018
604 Ga0207643_10116215
605 Ga0207705_10008306
606 Ga0207705_10091062
607 Ga0207705_10098889
608 Ga0207705_10456543
609 Ga0207654_10007049
610 Ga0207654_10053630
611 Ga0207695_10000068
612 Ga0207695_10000133
613 Ga0207695_10000241
614 Ga0207695_10031472
615 Ga0207695_10038128
616 Ga0207695_10096718
617 Ga0207695_10122049
618 Ga0207695_10150494
619 Ga0207671_10003515
620 Ga0207671_10010405
621 Ga0207671_10012702
622 Ga0207671_10013945
623 Ga0207671_10070319
624 Ga0207671_10270410
625 Ga0207671_10320653
626 Ga0207660_10007186
627 Ga0207662_10322159
628 Ga0207657_10005924
629 Ga0207657_10079784
630 Ga0207657_10210570
631 Ga0207652_10015549
632 Ga0207652_10273641
633 Ga0207694_10051883
634 Ga0207694_10211868
635 Ga0207694_10313024
636 Ga0207650_10188868
637 Ga0207659_10082315
638 Ga0207659_10359865
639 Ga0207706_10018259
640 Ga0207706_10045122
641 Ga0207706_10156638
642 Ga0207706_10312946
643 Ga0207686_10140392
644 Ga0207704_10001384
645 Ga0207691_10000013
646 Ga0207691_10061840
647 Ga0207689_10001979
648 Ga0207689_10024555
649 Ga0207689_10036287
650 Ga0207689_10037308
651 Ga0207661_10011203
652 Ga0207661_10027791
653 Ga0207679_10044642
654 Ga0207679_10303193
655 Ga0207667_10000629
656 Ga0207667_10001830
657 Ga0207667_10027516
658 Ga0207667_10030577
659 Ga0207667_10252313
660 Ga0207651_10263266
661 Ga0207712_10019613
662 Ga0207712_10057535
663 Ga0207712_10091234
664 Ga0207712_10152279
665 Ga0207712_10202067
666 Ga0207668_10000146
667 Ga0207668_10038439
668 Ga0207668_10308771
669 Ga0207640_10087191
670 Ga0207640_10132324
671 Ga0207640_10479192
672 Ga0207658_10000188
673 Ga0207658_10040720
674 Ga0207658_10142938
675 Ga0207658_10151268
676 Ga0207677_10000973
677 Ga0207677_10394353
678 Ga0207677_10404240
679 Ga0207677_10456276
680 Ga0207703_10000602
681 Ga0207703_10025936
682 Ga0207639_10064829
683 Ga0207639_10106670
684 Ga0207678_10015676
685 Ga0207708_10049876
686 Ga0207702_10051421
687 Ga0207702_10256442
688 Ga0207702_10320657
689 Ga0207641_10000015
690 Ga0207641_10006978
691 Ga0207648_10000881
692 Ga0207648_10076106
693 Ga0207648_10247668
694 Ga0207648_10364298
695 Ga0207676_10005081
696 Ga0207676_10021401
697 Ga0207676_10469620
698 Ga0207674_10110999
699 Ga0207674_10504626
700 Ga0207675_100000609
701 Ga0207675_100021483
702 Ga0207675_100044821
703 Ga0207683_10229830
704 Ga0207683_10370149
705 Ga0207698_10017949
706 Ga0207698_10098235
707 Ga0207698_10141083
708 Ga0207428_10070460
709 Ga0268266_10002302
710 Ga0268265_10021789
711 Ga0268264_10000870
712 Ga0268264_10002061
713 Ga0268264_10003631
714 Ga0268264_10051613
715 Ga0307515_10000031
716 Ga0307515_10002345
717 Ga0265327_10081976
718 Ga0307509_10075244
719 Ga0307509_10172495
720 Ga0307405_10009823
721 Ga0307413_10094874
722 Ga0307409_100073392
723 Ga0307416_100615080
724 Ga0307415_100057804
725 Ga0373927_0012623
726 Ga0395900_0304851
727 Ga0395901_0170878
728 Ga0436365_1057500
729 Ga0466961_0067145
730 Ga0466971_0122070
731 Ga0466959_0000827
732 Ga0466958_0027440
733 Ga0495650_0056107
734 Ga0495580_0062600
735 Ga0495611_0000050
736 Ga0496126_0006106
737 Ga0500622_0005528
738 2722728254

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

252

330

0.97

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

290

327

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mn2-assembly2.cif.gz_B the crystal structure of a probable arac family transcriptional regulator from rhodopseudomonas palustris cga009 0.9276 183 279
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.8966 182 277
3mkl-assembly1.cif.gz_A crystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12 0.8966 183 278
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8937 182 276
3mkl-assembly2.cif.gz_B crystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12 0.8891 181 282
ID Description Score Start End Superfamily
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9739 222 280 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9709 229 281 1.10.10.60
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9496 179 282 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9406 233 276 1.10.10.60
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9324 179 282 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A8B4Y3T5-F1-model_v4 deleted 0.9552 29 166
AF-A0A7Y2DJL0-F1-model_v4 AraC family transcriptional regulator 0.9523 3 150
AF-A0A7Y2DJL0-F1-model_v4 AraC family transcriptional regulator 0.928 3 150
AF-A0A4S2V6B7-F1-model_v4 AraC family transcriptional regulator 0.9222 182 281 GO:0003700
GO:0043565
AF-A0A7X7EVJ8-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9024 29 279 GO:0003700
GO:0043565

Map