F425158

General Info

Members Datasets Scaffolds Average Seq Length
369 210 331 235

Family's Representative Sequence

Representative Sequence 3300046525|Ga0495663_0013363|Ga0495663_0013363_487_1323
Length 278
Sequence LICSPSNTADISGAKQFLPKHLKHLLCPVVLERSLPGMNNTPIRLLIHGASGRMGQALLRLAAEDSSLQVVAAVVRKPPAQRVVEGIPHFAASELAGAPPFDVAIDFSLPEGFDPVLALCVERGVGFVSGTTGISDVQQAALSAAAERIPLVWATNFSLGVAVLAELVERAAAALPGWDCDIVESHHVHKKDAPSGTAITLGEAAEQGGAAPHFASLRAGDIIGEHFVQFTGLGERVELVHRATNRDIFARGALHVASQLKAQAPGQYRVRDLVGKAR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
3 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
4 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
5 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
6 2643221695 Lysobacter sp. Root494 Isolate Unclassified
7 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
8 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
9 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
10 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
11 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
12 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
13 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
14 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
15 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
16 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
17 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
18 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
19 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
20 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
21 2919513703 Luteimonas sp. 3794 Isolate Unclassified
22 2919675420 Luteimonas terrae 4099 Isolate Unclassified
23 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
24 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
25 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
26 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
27 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
28 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
29 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
30 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
31 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
32 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
33 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
34 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
35 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
36 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
37 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
38 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
39 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
40 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
41 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
42 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
43 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
44 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
45 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
46 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
47 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
48 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
49 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
50 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
51 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
52 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
53 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
54 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
55 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
56 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
57 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
58 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
59 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
60 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
61 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
62 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
63 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
64 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
74 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
75 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
76 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
79 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
80 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
106 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
107 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
110 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
111 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
112 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
113 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
114 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
115 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
130 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
131 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
132 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
133 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
134 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
135 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
136 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
137 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
138 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
139 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
140 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
141 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
142 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
143 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
144 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
145 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
146 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
147 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
148 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
149 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
150 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
151 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
152 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
153 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
154 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
155 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
156 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
157 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
158 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
159 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
160 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
161 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
162 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
163 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
164 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
165 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
166 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
167 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
176 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
177 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
178 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
179 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
186 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
193 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
196 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
197 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
198 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
200 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
201 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
202 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
203 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
204 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
205 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
206 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
207 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
208 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
209 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
210 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.7
Metatranscriptomes 0
Isolates 10.3

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 20.05
Nodule 0.27
Rhizoplane 4.61
Rhizosphere 50.41
Stem 0
Stem Tuber 0
Unclassified 24.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1501249 2162886007 Bacteria 6053
2 JGI25150J39212_1000434 3300002774 Bacteria 18752
3 JGI25151J46595_10000315 3300003187 Bacteria 52657
4 JGI25151J46595_10044973 3300003187 Bacteria 1562
5 JGI25153J46596_10000167 3300003215 Bacteria 66040
6 rootH1_10116286 3300003323 Bacteria 5166
7 Ga0055526_1004952 3300003771 Bacteria 7822
8 Ga0055526_1014801 3300003771 Bacteria 3178
9 Ga0055537_1000091 3300003773 Bacteria 66379
10 Ga0055524_1005794 3300003775 Bacteria 5460
11 Ga0055524_1006134 3300003775 Bacteria 5257
12 Ga0055536_1000812 3300003781 Bacteria 20671
13 Ga0055536_1000925 3300003781 Bacteria 18922
14 Ga0055536_1008383 3300003781 Bacteria 4450
15 Ga0055536_1018885 3300003781 Bacteria 2189
16 Ga0055534_1000043 3300003784 Bacteria 99338
17 Ga0055528_1000087 3300003790 Bacteria 72896
18 Ga0055530_10002072 3300003791 Bacteria 13463
19 Ga0055530_10007281 3300003791 Bacteria 4696
20 Ga0055530_10019000 3300003791 Bacteria 2096
21 Ga0055540_1028391 3300003792 Bacteria 1324
22 Ga0055531_10001450 3300003794 Bacteria 17510
23 Ga0055531_10005385 3300003794 Bacteria 7500
24 Ga0055531_10005500 3300003794 Bacteria 7407
25 Ga0055531_10009895 3300003794 Bacteria 4822
26 Ga0055531_10014552 3300003794 Bacteria 3534
27 Ga0055531_10019784 3300003794 Bacteria 2703
28 Ga0055531_10021362 3300003794 Bacteria 2513
29 Ga0055531_10033044 3300003794 Bacteria 1675
30 Ga0065714_10029641 3300005288 Bacteria 1833
31 Ga0065704_10000898 3300005289 Bacteria 21490
32 Ga0065715_10002546 3300005293 Bacteria 6588
33 Ga0065715_10134857 3300005293 Bacteria 1938
34 Ga0070670_100017704 3300005331 Bacteria 6112
35 Ga0068869_100212695 3300005334 Bacteria 1529
36 Ga0070680_100115778 3300005336 Bacteria 2234
37 Ga0070661_100335243 3300005344 Bacteria 1184
38 Ga0070668_100022273 3300005347 Bacteria 4789
39 Ga0070668_100161676 3300005347 Bacteria 1817
40 Ga0070669_100143923 3300005353 Bacteria 1840
41 Ga0070675_100540591 3300005354 Bacteria 1053
42 Ga0070671_100019708 3300005355 Bacteria 5492
43 Ga0070667_100207590 3300005367 Bacteria 1740
44 Ga0070714_100697037 3300005435 Bacteria 980
45 Ga0070665_100514788 3300005548 Bacteria 1208
46 Ga0068854_100215924 3300005578 Bacteria 1515
47 Ga0075364_10019604 3300006051 Bacteria 4245
48 Ga0075364_10076463 3300006051 Bacteria 2209
49 Ga0105251_10183767 3300009011 Bacteria 942
50 Ga0105244_10065310 3300009036 Bacteria 1823
51 Ga0105244_10206980 3300009036 Bacteria 924
52 Ga0105240_10464871 3300009093 Bacteria 1413
53 Ga0105242_10075278 3300009176 Bacteria 2810
54 Ga0105248_10065453 3300009177 Bacteria 4081
55 Ga0157373_10070228 3300013100 Bacteria 2475
56 Ga0157373_10150769 3300013100 Bacteria 1635
57 Ga0157371_10192548 3300013102 Bacteria 1460
58 Ga0157370_10085750 3300013104 Bacteria 2959
59 Ga0157370_10397027 3300013104 Bacteria 1270
60 Ga0157374_10642761 3300013296 Bacteria 1072
61 Ga0157375_10069992 3300013308 Bacteria 3517
62 Ga0157375_10073137 3300013308 Bacteria 3447
63 Ga0157375_10266658 3300013308 Bacteria 1874
64 Ga0182008_10014820 3300014497 Bacteria 4077
65 Ga0182008_10087168 3300014497 Bacteria 1538
66 Ga0182006_1021045 3300015261 Bacteria 2724
67 Ga0182006_1030046 3300015261 Bacteria 2199
68 Ga0182007_10000556 3300015262 Bacteria 22049
69 Ga0182005_1000463 3300015265 Bacteria 21182
70 Ga0163161_10019783 3300017792 Bacteria 4723
71 Ga0163161_10105356 3300017792 Bacteria 2103
72 Ga0163161_10173320 3300017792 Bacteria 1650
73 Ga0207425_1000097 3300025245 Bacteria 84719
74 Ga0209129_1000189 3300025258 Bacteria 84712
75 Ga0209565_1000063 3300025263 Bacteria 183711
76 Ga0209673_1000065 3300025273 Bacteria 252799
77 Ga0209673_1004687 3300025273 Bacteria 7212
78 Ga0209675_1000011 3300025291 Bacteria 520597
79 Ga0209675_1015306 3300025291 Bacteria 2287
80 Ga0209676_1000011 3300025292 Bacteria 860463
81 Ga0209676_1000068 3300025292 Bacteria 314068
82 Ga0209676_1000086 3300025292 Bacteria 264155
83 Ga0209676_1000981 3300025292 Bacteria 34140
84 Ga0209676_1001944 3300025292 Bacteria 16652
85 Ga0209676_1014295 3300025292 Bacteria 2994
86 Ga0209676_1031072 3300025292 Bacteria 1624
87 Ga0209025_1000054 3300025294 Bacteria 317002
88 Ga0209025_1001858 3300025294 Bacteria 24731
89 Ga0209025_1002444 3300025294 Bacteria 19667
90 Ga0209025_1084957 3300025294 Bacteria 1058
91 Ga0209564_1000433 3300025295 Bacteria 72594
92 Ga0209758_1000062 3300025297 Bacteria 317002
93 Ga0209050_1000528 3300025298 Bacteria 63464
94 Ga0209050_1000599 3300025298 Bacteria 57405
95 Ga0209256_1005613 3300025299 Bacteria 7117
96 Ga0209256_1005695 3300025299 Bacteria 7000
97 Ga0209256_1006369 3300025299 Bacteria 6284
98 Ga0209256_1006961 3300025299 Bacteria 5761
99 Ga0209051_1003517 3300025303 Bacteria 10229
100 Ga0209257_1000014 3300025304 Bacteria 946850
101 Ga0209257_1000121 3300025304 Bacteria 222588
102 Ga0209257_1000145 3300025304 Bacteria 195152
103 Ga0209257_1001034 3300025304 Bacteria 37233
104 Ga0209257_1001140 3300025304 Bacteria 33983
105 Ga0209257_1008065 3300025304 Bacteria 6130
106 Ga0209257_1009184 3300025304 Bacteria 5373
107 Ga0209257_1016458 3300025304 Bacteria 2991
108 Ga0209257_1029083 3300025304 Bacteria 1806
109 Ga0207649_10278654 3300025920 Bacteria 1215
110 Ga0207652_10255407 3300025921 Bacteria 1581
111 Ga0207681_10010700 3300025923 Bacteria 5629
112 Ga0207644_10000313 3300025931 Bacteria 31603
113 Ga0207709_10000632 3300025935 Bacteria 28799
114 Ga0207711_10030849 3300025941 Bacteria 4523
115 Ga0207689_10096272 3300025942 Bacteria 2431
116 Ga0207668_10029497 3300025972 Bacteria 3596
117 Ga0207668_10143212 3300025972 Bacteria 1841
118 Ga0209371_1000004 3300027312 Bacteria 1098197
119 Ga0209982_1000787 3300027552 Bacteria 4099
120 Ga0209971_1000256 3300027682 Bacteria 15027
121 Ga0209974_10006096 3300027876 Bacteria 4220
122 Ga0268266_10228187 3300028379 Bacteria 1714
123 Ga0268266_10433010 3300028379 Bacteria 1248
124 Ga0268265_10299833 3300028380 Bacteria 1447
125 Ga0265323_10007821 3300028653 Unclassified 4420
126 Ga0265322_10000390 3300028654 Bacteria 18203
127 Ga0265336_10012021 3300028666 Bacteria 2924
128 Ga0265338_10000027 3300028800 Bacteria 291580
129 Ga0265338_10005479 3300028800 Bacteria 16553
130 Ga0265338_10043379 3300028800 Bacteria 4173
131 Ga0268256_1000005 3300030500 Bacteria 1082342
132 Ga0316177_1004253 3300030731 Bacteria 6301
133 Ga0316176_1035623 3300030732 Bacteria 3714
134 Ga0316176_1172985 3300030732 Bacteria 1641
135 Ga0316183_1014708 3300030742 Bacteria 5209
136 Ga0316181_1003585 3300030744 Bacteria 1536
137 Ga0316181_1070819 3300030744 Bacteria 1673
138 Ga0316182_1165211 3300030745 Bacteria 1484
139 Ga0307513_10049385 3300031456 Bacteria 4558
140 Ga0307413_10060377 3300031824 Bacteria 2334
141 Ga0307413_10160949 3300031824 Bacteria 1577
142 Ga0307410_10126691 3300031852 Bacteria 1870
143 Ga0307412_10002168 3300031911 Bacteria 10898
144 Ga0307412_10132146 3300031911 Bacteria 1815
145 Ga0307409_100152033 3300031995 Bacteria 2011
146 Ga0307416_100166882 3300032002 Bacteria 2043
147 Ga0307414_10003355 3300032004 Bacteria 8551
148 Ga0307414_10007761 3300032004 Bacteria 6046
149 Ga0307414_10022786 3300032004 Bacteria 3958
150 Ga0307414_10061165 3300032004 Bacteria 2666
151 Ga0307414_10068998 3300032004 Bacteria 2539
152 Ga0307414_10152670 3300032004 Bacteria 1824
153 Ga0307414_10258770 3300032004 Bacteria 1451
154 Ga0307414_10290297 3300032004 Bacteria 1378
155 Ga0307414_10366382 3300032004 Bacteria 1241
156 Ga0307414_10370672 3300032004 Bacteria 1235
157 Ga0307414_10424606 3300032004 Bacteria 1160
158 Ga0307411_10004163 3300032005 Bacteria 6874
159 Ga0373952_0020401 3300035092 Bacteria 1389
160 Ga0395899_0036257 3300037312 Bacteria 3700
161 Ga0395900_0168608 3300037418 Bacteria 2230
162 Ga0395898_0124446 3300037466 Bacteria 2470
163 Ga0395905_0029664 3300037471 Bacteria 5155
164 Ga0395905_0342375 3300037471 Bacteria 1386
165 Ga0395901_0767004 3300038443 Bacteria 956
166 Ga0237819_00164 3300038705 Bacteria 24369
167 Ga0237816_03045 3300039145 Bacteria 1245
168 Ga0439436_0034638 3300041404 Bacteria 1460
169 Ga0439439_0008815 3300041406 Bacteria 2387
170 Ga0439465_0003708 3300041413 Bacteria 4980
171 Ga0439465_0019432 3300041413 Bacteria 2123
172 Ga0439465_0081187 3300041413 Bacteria 1099
173 Ga0451789_1268618 3300041443 Bacteria 1358
174 Ga0451791_0143902 3300041451 Bacteria 1895
175 Ga0451791_0357488 3300041451 Bacteria 1179
176 Ga0451791_0893708 3300041451 Bacteria 1424
177 Ga0451793_1160565 3300041452 Bacteria 1625
178 Ga0451802_0022625 3300041460 Bacteria 1543
179 Ga0451807_1247630 3300041486 Bacteria 1822
180 Ga0451837_0619771 3300041494 Bacteria 922
181 Ga0451837_1442167 3300041494 Bacteria 1625
182 Ga0451843_0986995 3300041509 Bacteria 1187
183 Ga0451853_3266339 3300041512 Bacteria 1557
184 Ga0439431_0015337 3300041997 Bacteria 1783
185 Ga0439445_0103666 3300042004 Bacteria 808
186 Ga0439432_002482 3300042006 Bacteria 6950
187 Ga0439432_008535 3300042006 Bacteria 3594
188 Ga0439449_0006091 3300042007 Bacteria 4610
189 Ga0439449_0009034 3300042007 Bacteria 3781
190 Ga0439449_0016820 3300042007 Bacteria 2747
191 Ga0439462_0041513 3300042015 Bacteria 1228
192 Ga0450911_001698 3300042115 Bacteria 4844
193 Ga0451577_0008202 3300042876 Bacteria 10184
194 Ga0451577_0011963 3300042876 Bacteria 8177
195 Ga0451577_0589930 3300042876 Bacteria 1008
196 Ga0453684_0000593 3300044712 Bacteria 134271
197 Ga0453684_0068480 3300044712 Unclassified 4507
198 Ga0451576_0000156 3300045051 Bacteria 174140
199 Ga0495627_030577 3300046453 Bacteria 1706
200 Ga0495638_0031124 3300046460 Bacteria 3430
201 Ga0495638_0032168 3300046460 Bacteria 3366
202 Ga0495638_0080241 3300046460 Bacteria 1983
203 Ga0495638_0312872 3300046460 Bacteria 842
204 Ga0495607_0048056 3300046501 Bacteria 2496
205 Ga0495606_0024412 3300046507 Bacteria 4356
206 Ga0495610_0027653 3300046512 Bacteria 3010
207 Ga0495610_0106476 3300046512 Bacteria 1248
208 Ga0495610_0166697 3300046512 Bacteria 927
209 Ga0495616_0168136 3300046513 Bacteria 982
210 Ga0495631_0046377 3300046518 Bacteria 1911
211 Ga0495643_0025387 3300046522 Bacteria 3352
212 Ga0495663_0002466 3300046525 Bacteria 5564
213 Ga0495663_0003604 3300046525 Bacteria 4447
214 Ga0495663_0010019 3300046525 Bacteria 2630
215 Ga0495663_0013363 3300046525 Bacteria 2295
216 Ga0495663_0024755 3300046525 Bacteria 1746
217 Ga0495598_0008370 3300046537 Bacteria 2407
218 Ga0495633_0004426 3300046558 Bacteria 8945
219 Ga0495633_0011547 3300046558 Bacteria 4754
220 Ga0495633_0030349 3300046558 Bacteria 2626
221 Ga0495633_0036944 3300046558 Bacteria 2338
222 Ga0495633_0155101 3300046558 Bacteria 1057
223 Ga0495625_0062861 3300046660 Bacteria 2622
224 Ga0495625_0180188 3300046660 Bacteria 1405
225 Ga0495671_0011201 3300046692 Bacteria 4947
226 Ga0495660_0069444 3300046810 Bacteria 1873
227 Ga0495672_0000105 3300047320 Bacteria 133882
228 Ga0495686_0032227 3300047472 Bacteria 3393
229 Ga0496100_0281895 3300048903 Bacteria 1239
230 Ga0496104_0383900 3300048907 Bacteria 1317
231 Ga0496105_0378781 3300048908 Bacteria 1126
232 Ga0496106_0036405 3300048909 Bacteria 3682
233 Ga0496108_0154008 3300048911 Bacteria 1984
234 Ga0496109_0023787 3300048912 Bacteria 5438
235 Ga0496112_0367314 3300048915 Bacteria 1380
236 Ga0496113_0010127 3300048916 Bacteria 6221
237 Ga0496113_0096810 3300048916 Bacteria 2282
238 Ga0496113_0215181 3300048916 Bacteria 1530
239 Ga0496116_0004153 3300048919 Bacteria 13942
240 Ga0496116_0046428 3300048919 Bacteria 2931
241 Ga0496116_0087234 3300048919 Bacteria 1910
242 Ga0496117_0001191 3300048920 Bacteria 39121
243 Ga0496117_0002104 3300048920 Bacteria 26184
244 Ga0496117_0006034 3300048920 Bacteria 12450
245 Ga0496117_0006273 3300048920 Bacteria 12111
246 Ga0496117_0124395 3300048920 Bacteria 1577
247 Ga0496117_0187846 3300048920 Bacteria 1180
248 Ga0496118_0000858 3300048921 Bacteria 48244
249 Ga0496118_0003962 3300048921 Bacteria 18085
250 Ga0496118_0038534 3300048921 Bacteria 3829
251 Ga0496118_0038845 3300048921 Bacteria 3809
252 Ga0496118_0107032 3300048921 Bacteria 1868
253 Ga0496118_0110214 3300048921 Bacteria 1829
254 Ga0496118_0158572 3300048921 Bacteria 1403
255 Ga0496118_0160167 3300048921 Bacteria 1393
256 Ga0496118_0194641 3300048921 Bacteria 1208
257 Ga0496119_0001416 3300048922 Bacteria 29034
258 Ga0496119_0002285 3300048922 Bacteria 21233
259 Ga0496119_0041396 3300048922 Bacteria 2934
260 Ga0496120_0000181 3300048923 Bacteria 107114
261 Ga0496120_0000676 3300048923 Bacteria 50058
262 Ga0496120_0221136 3300048923 Bacteria 905
263 Ga0496121_0032921 3300048924 Bacteria 4703
264 Ga0496121_0067149 3300048924 Bacteria 2907
265 Ga0496121_0180999 3300048924 Bacteria 1521
266 Ga0496121_0213177 3300048924 Bacteria 1366
267 Ga0496122_0002028 3300048925 Bacteria 30069
268 Ga0496122_0017646 3300048925 Bacteria 6656
269 Ga0496122_0027894 3300048925 Bacteria 4812
270 Ga0496122_0040596 3300048925 Bacteria 3694
271 Ga0496122_0051406 3300048925 Bacteria 3131
272 Ga0496122_0065776 3300048925 Bacteria 2626
273 Ga0496122_0096227 3300048925 Bacteria 1997
274 Ga0496122_0211949 3300048925 Bacteria 1121
275 Ga0496123_0012103 3300048926 Bacteria 7391
276 Ga0496123_0012872 3300048926 Bacteria 7084
277 Ga0496123_0021836 3300048926 Bacteria 4959
278 Ga0496123_0039084 3300048926 Bacteria 3323
279 Ga0496123_0051459 3300048926 Bacteria 2742
280 Ga0496123_0066745 3300048926 Bacteria 2277
281 Ga0496123_0102283 3300048926 Bacteria 1663
282 Ga0496123_0217502 3300048926 Bacteria 966
283 Ga0496123_0232048 3300048926 Bacteria 922
284 Ga0496124_0000009 3300048927 Bacteria 734820
285 Ga0496124_0001061 3300048927 Bacteria 43394
286 Ga0496124_0004084 3300048927 Bacteria 17267
287 Ga0496124_0005543 3300048927 Bacteria 14139
288 Ga0496124_0025087 3300048927 Bacteria 5405
289 Ga0496124_0033480 3300048927 Bacteria 4520
290 Ga0496124_0074574 3300048927 Bacteria 2804
291 Ga0496124_0111113 3300048927 Bacteria 2205
292 Ga0496124_0586130 3300048927 Bacteria 728
293 Ga0496125_0002711 3300048928 Bacteria 22502
294 Ga0496125_0032825 3300048928 Bacteria 4605
295 Ga0496125_0036329 3300048928 Bacteria 4304
296 Ga0496125_0096994 3300048928 Bacteria 2186
297 Ga0496125_0121359 3300048928 Bacteria 1863
298 Ga0496125_0126345 3300048928 Bacteria 1811
299 Ga0496125_0260737 3300048928 Bacteria 1086
300 Ga0496126_0004409 3300048929 Bacteria 16857
301 Ga0496126_0313016 3300048929 Bacteria 1292
302 Ga0501031_0002335 3300049568 Bacteria 12012
303 Ga0501032_0032972 3300049569 Bacteria 3549
304 Ga0501033_0035124 3300049570 Bacteria 3758
305 Ga0501034_0000344 3300049571 Bacteria 80851
306 Ga0501034_0001973 3300049571 Bacteria 26001
307 Ga0501034_0019907 3300049571 Bacteria 6855
308 Ga0501034_0777744 3300049571 Bacteria 851
309 Ga0501034_0894050 3300049571 Bacteria 776
310 Ga0501036_0001289 3300049572 Bacteria 19204
311 Ga0501037_0005791 3300049573 Bacteria 9026
312 Ga0501039_0056104 3300049575 Bacteria 3051
313 Ga0501043_0040357 3300049579 Bacteria 3668
314 Ga0501043_0521425 3300049579 Bacteria 886
315 Ga0501047_0235980 3300049581 Bacteria 1681
316 Ga0501068_0247452 3300049584 Bacteria 1136
317 Ga0501070_0010973 3300049586 Bacteria 7648
318 Ga0501070_0137174 3300049586 Bacteria 2020
319 Ga0501080_0018334 3300049742 Bacteria 6478
320 Ga0501035_0041051 3300049822 Bacteria 4178
321 Ga0501044_0011340 3300049823 Bacteria 9657
322 Ga0501044_0411531 3300049823 Bacteria 1263
323 nmdc:mga00v17_238412_c1 3300050491 Bacteria 1179
324 nmdc:mga00v17_242945_c1 3300050491 Bacteria 1168
325 nmdc:mga00v17_38111_c1 3300050491 Bacteria 2873
326 nmdc:mga00v17_542_c1 3300050491 Bacteria 15377
327 Ga0500595_000008 3300053119 Bacteria 284388
328 Ga0500585_052955 3300053144 Bacteria 1451
329 Ga0500616_0000898 3300053153 Bacteria 32658
330 Ga0500634_0000098 3300053161 Bacteria 34065
331 Ga0500565_007922 3300053734 Bacteria 1019

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0589930 Ga0451577_0589930_29_754 208
2 3300044712 Ga0453684_0000593 Ga0453684_0000593_91197_91922 208
3 3300045051 Ga0451576_0000156 Ga0451576_0000156_82275_83000 208
4 3300049568 Ga0501031_0002335 Ga0501031_0002335_5043_5753 211
5 3300049569 Ga0501032_0032972 Ga0501032_0032972_864_1574 211
6 3300049572 Ga0501036_0001289 Ga0501036_0001289_16263_16973 211
7 3300049573 Ga0501037_0005791 Ga0501037_0005791_4908_5618 211
8 3300049575 Ga0501039_0056104 Ga0501039_0056104_130_840 211
9 3300049579 Ga0501043_0040357 Ga0501043_0040357_39_704 211
10 3300049584 Ga0501068_0247452 Ga0501068_0247452_272_982 211
11 3300049586 Ga0501070_0010973 Ga0501070_0010973_3179_3889 211
12 3300049742 Ga0501080_0018334 Ga0501080_0018334_2583_3293 211
13 3300049822 Ga0501035_0041051 Ga0501035_0041051_54_764 211
14 3300049823 Ga0501044_0011340 Ga0501044_0011340_5437_6147 211
15 3300032004 Ga0307414_10022786 Ga0307414_100227861 214
16 3300003323 rootH1_10116286 rootH1_101162863 215
17 3300032004 Ga0307414_10258770 Ga0307414_102587701 215
18 3300041512 Ga0451853_3266339 Ga0451853_3266339_89_796 215
19 3300053119 Ga0500595_000008 Ga0500595_000008_91095_91793 217
20 3300053144 Ga0500585_052955 Ga0500585_052955_39_737 217
21 3300009093 Ga0105240_10464871 Ga0105240_104648712 218
22 3300009176 Ga0105242_10075278 Ga0105242_100752782 218
23 3300013308 Ga0157375_10073137 Ga0157375_100731372 218
24 3300005334 Ga0068869_100212695 Ga0068869_1002126952 219
25 3300009177 Ga0105248_10065453 Ga0105248_100654535 219
26 3300013296 Ga0157374_10642761 Ga0157374_106427612 219
27 3300013308 Ga0157375_10069992 Ga0157375_100699923 219
28 3300025941 Ga0207711_10030849 Ga0207711_100308496 219
29 3300025942 Ga0207689_10096272 Ga0207689_100962722 219
30 3300032002 Ga0307416_100166882 Ga0307416_1001668821 219
31 3300005347 Ga0070668_100161676 Ga0070668_1001616763 220
32 3300028653 Ga0265323_10007821 Ga0265323_100078212 220
33 3300028654 Ga0265322_10000390 Ga0265322_1000039017 220
34 3300028666 Ga0265336_10012021 Ga0265336_100120213 220
35 3300028800 Ga0265338_10000027 Ga0265338_10000027164 220
36 3300028800 Ga0265338_10005479 Ga0265338_100054797 220
37 3300028800 Ga0265338_10043379 Ga0265338_100433792 220
38 3300042876 Ga0451577_0008202 Ga0451577_0008202_6037_6759 220
39 3300042876 Ga0451577_0011963 Ga0451577_0011963_1075_1788 220
40 3300044712 Ga0453684_0068480 Ga0453684_0068480_2618_3331 220
41 3300049571 Ga0501034_0894050 Ga0501034_0894050_41_748 220
42 3300003187 JGI25151J46595_10044973 JGI25151J46595_100449732 221
43 3300005288 Ga0065714_10029641 Ga0065714_100296412 221
44 3300005293 Ga0065715_10002546 Ga0065715_100025465 221
45 3300005293 Ga0065715_10134857 Ga0065715_101348572 221
46 3300005336 Ga0070680_100115778 Ga0070680_1001157782 221
47 3300005344 Ga0070661_100335243 Ga0070661_1003352431 221
48 3300005353 Ga0070669_100143923 Ga0070669_1001439232 221
49 3300005367 Ga0070667_100207590 Ga0070667_1002075902 221
50 3300013308 Ga0157375_10266658 Ga0157375_102666582 221
51 3300025294 Ga0209025_1001858 Ga0209025_10018581 221
52 3300025920 Ga0207649_10278654 Ga0207649_102786542 221
53 3300025921 Ga0207652_10255407 Ga0207652_102554072 221
54 3300025923 Ga0207681_10010700 Ga0207681_100107002 221
55 3300030731 Ga0316177_1004253 Ga0316177_10042533 221
56 3300030732 Ga0316176_1172985 Ga0316176_11729852 221
57 3300031824 Ga0307413_10060377 Ga0307413_100603772 221
58 3300031852 Ga0307410_10126691 Ga0307410_101266912 221
59 3300031995 Ga0307409_100152033 Ga0307409_1001520332 221
60 3300032004 Ga0307414_10007761 Ga0307414_100077613 221
61 3300032004 Ga0307414_10424606 Ga0307414_104246062 221
62 3300032005 Ga0307411_10004163 Ga0307411_100041636 221
63 3300035092 Ga0373952_0020401 Ga0373952_0020401_392_1102 221
64 3300041404 Ga0439436_0034638 Ga0439436_0034638_624_1334 221
65 3300041406 Ga0439439_0008815 Ga0439439_0008815_239_943 221
66 3300042006 Ga0439432_002482 Ga0439432_002482_4450_5160 221
67 3300042006 Ga0439432_008535 Ga0439432_008535_2502_3212 221
68 3300042007 Ga0439449_0006091 Ga0439449_0006091_1304_2014 221
69 3300042007 Ga0439449_0016820 Ga0439449_0016820_1940_2650 221
70 3300042015 Ga0439462_0041513 Ga0439462_0041513_351_1061 221
71 3300046460 Ga0495638_0031124 Ga0495638_0031124_2059_2778 221
72 3300046537 Ga0495598_0008370 Ga0495598_0008370_300_1025 221
73 3300049570 Ga0501033_0035124 Ga0501033_0035124_1082_1798 221
74 3300049579 Ga0501043_0521425 Ga0501043_0521425_57_767 221
75 3300049581 Ga0501047_0235980 Ga0501047_0235980_60_791 221
76 3300049586 Ga0501070_0137174 Ga0501070_0137174_55_786 221
77 3300049823 Ga0501044_0411531 Ga0501044_0411531_181_891 221
78 3300053153 Ga0500616_0000898 Ga0500616_0000898_2733_3461 221
79 iso_pu_bacteria 2643221695 2644529377 221
80 iso_pu_bacteria 2894414249 2894415654 221
81 3300002774 JGI25150J39212_1000434 JGI25150J39212_100043413 222
82 3300003187 JGI25151J46595_10000315 JGI25151J46595_1000031522 222
83 3300003215 JGI25153J46596_10000167 JGI25153J46596_1000016722 222
84 3300003771 Ga0055526_1004952 Ga0055526_10049526 222
85 3300003771 Ga0055526_1014801 Ga0055526_10148013 222
86 3300003773 Ga0055537_1000091 Ga0055537_100009136 222
87 3300003775 Ga0055524_1005794 Ga0055524_10057942 222
88 3300003775 Ga0055524_1006134 Ga0055524_10061341 222
89 3300003781 Ga0055536_1000812 Ga0055536_10008122 222
90 3300003781 Ga0055536_1000925 Ga0055536_100092519 222
91 3300003781 Ga0055536_1018885 Ga0055536_10188851 222
92 3300003784 Ga0055534_1000043 Ga0055534_100004361 222
93 3300003790 Ga0055528_1000087 Ga0055528_100008726 222
94 3300003791 Ga0055530_10002072 Ga0055530_100020723 222
95 3300003791 Ga0055530_10007281 Ga0055530_100072812 222
96 3300003791 Ga0055530_10019000 Ga0055530_100190002 222
97 3300003792 Ga0055540_1028391 Ga0055540_10283913 222
98 3300003794 Ga0055531_10001450 Ga0055531_100014502 222
99 3300003794 Ga0055531_10005385 Ga0055531_100053852 222
100 3300003794 Ga0055531_10005500 Ga0055531_100055002 222
101 3300003794 Ga0055531_10009895 Ga0055531_100098956 222
102 3300003794 Ga0055531_10014552 Ga0055531_100145523 222
103 3300003794 Ga0055531_10019784 Ga0055531_100197843 222
104 3300003794 Ga0055531_10021362 Ga0055531_100213621 222
105 3300003794 Ga0055531_10033044 Ga0055531_100330441 222
106 3300005331 Ga0070670_100017704 Ga0070670_1000177041 222
107 3300005354 Ga0070675_100540591 Ga0070675_1005405911 222
108 3300005435 Ga0070714_100697037 Ga0070714_1006970371 222
109 3300006051 Ga0075364_10076463 Ga0075364_100764631 222
110 3300009011 Ga0105251_10183767 Ga0105251_101837671 222
111 3300009036 Ga0105244_10206980 Ga0105244_102069801 222
112 3300013100 Ga0157373_10150769 Ga0157373_101507692 222
113 3300013104 Ga0157370_10085750 Ga0157370_100857503 222
114 3300014497 Ga0182008_10014820 Ga0182008_100148203 222
115 3300014497 Ga0182008_10087168 Ga0182008_100871682 222
116 3300015261 Ga0182006_1021045 Ga0182006_10210452 222
117 3300015261 Ga0182006_1030046 Ga0182006_10300461 222
118 3300015262 Ga0182007_10000556 Ga0182007_100005565 222
119 3300015265 Ga0182005_1000463 Ga0182005_10004634 222
120 3300017792 Ga0163161_10019783 Ga0163161_100197832 222
121 3300017792 Ga0163161_10173320 Ga0163161_101733202 222
122 3300025245 Ga0207425_1000097 Ga0207425_100009737 222
123 3300025258 Ga0209129_1000189 Ga0209129_100018937 222
124 3300025263 Ga0209565_1000063 Ga0209565_100006351 222
125 3300025273 Ga0209673_1000065 Ga0209673_100006588 222
126 3300025273 Ga0209673_1004687 Ga0209673_10046874 222
127 3300025291 Ga0209675_1000011 Ga0209675_1000011231 222
128 3300025291 Ga0209675_1015306 Ga0209675_10153062 222
129 3300025292 Ga0209676_1000011 Ga0209676_1000011588 222
130 3300025292 Ga0209676_1000981 Ga0209676_10009812 222
131 3300025292 Ga0209676_1001944 Ga0209676_100194411 222
132 3300025292 Ga0209676_1014295 Ga0209676_10142953 222
133 3300025292 Ga0209676_1031072 Ga0209676_10310721 222
134 3300025294 Ga0209025_1000054 Ga0209025_100005437 222
135 3300025294 Ga0209025_1002444 Ga0209025_100244421 222
136 3300025294 Ga0209025_1084957 Ga0209025_10849572 222
137 3300025295 Ga0209564_1000433 Ga0209564_100043314 222
138 3300025297 Ga0209758_1000062 Ga0209758_100006237 222
139 3300025298 Ga0209050_1000528 Ga0209050_100052858 222
140 3300025298 Ga0209050_1000599 Ga0209050_10005993 222
141 3300025299 Ga0209256_1005613 Ga0209256_10056135 222
142 3300025299 Ga0209256_1005695 Ga0209256_10056955 222
143 3300025299 Ga0209256_1006369 Ga0209256_10063693 222
144 3300025299 Ga0209256_1006961 Ga0209256_10069613 222
145 3300025303 Ga0209051_1003517 Ga0209051_10035178 222
146 3300025304 Ga0209257_1000014 Ga0209257_1000014647 222
147 3300025304 Ga0209257_1000121 Ga0209257_100012190 222
148 3300025304 Ga0209257_1000145 Ga0209257_1000145105 222
149 3300025304 Ga0209257_1001034 Ga0209257_10010342 222
150 3300025304 Ga0209257_1001140 Ga0209257_10011403 222
151 3300025304 Ga0209257_1008065 Ga0209257_10080653 222
152 3300025304 Ga0209257_1009184 Ga0209257_10091842 222
153 3300025304 Ga0209257_1016458 Ga0209257_10164583 222
154 3300025304 Ga0209257_1029083 Ga0209257_10290833 222
155 3300025972 Ga0207668_10143212 Ga0207668_101432122 222
156 3300027552 Ga0209982_1000787 Ga0209982_10007874 222
157 3300027682 Ga0209971_1000256 Ga0209971_100025612 222
158 3300027876 Ga0209974_10006096 Ga0209974_100060962 222
159 3300028379 Ga0268266_10228187 Ga0268266_102281871 222
160 3300028380 Ga0268265_10299833 Ga0268265_102998331 222
161 3300030732 Ga0316176_1035623 Ga0316176_10356233 222
162 3300030742 Ga0316183_1014708 Ga0316183_10147083 222
163 3300030744 Ga0316181_1070819 Ga0316181_10708192 222
164 3300031456 Ga0307513_10049385 Ga0307513_100493851 222
165 3300031824 Ga0307413_10160949 Ga0307413_101609492 222
166 3300031911 Ga0307412_10132146 Ga0307412_101321462 222
167 3300032004 Ga0307414_10003355 Ga0307414_100033554 222
168 3300032004 Ga0307414_10061165 Ga0307414_100611652 222
169 3300032004 Ga0307414_10068998 Ga0307414_100689982 222
170 3300032004 Ga0307414_10152670 Ga0307414_101526703 222
171 3300032004 Ga0307414_10366382 Ga0307414_103663822 222
172 3300032004 Ga0307414_10370672 Ga0307414_103706721 222
173 3300038705 Ga0237819_00164 Ga0237819_00164_1104_1826 222
174 3300041413 Ga0439465_0003708 Ga0439465_0003708_1163_1876 222
175 3300041413 Ga0439465_0081187 Ga0439465_0081187_130_852 222
176 3300041443 Ga0451789_1268618 Ga0451789_1268618_211_924 222
177 3300041451 Ga0451791_0143902 Ga0451791_0143902_197_910 222
178 3300041451 Ga0451791_0357488 Ga0451791_0357488_367_1080 222
179 3300041451 Ga0451791_0893708 Ga0451791_0893708_82_795 222
180 3300041452 Ga0451793_1160565 Ga0451793_1160565_275_988 222
181 3300041460 Ga0451802_0022625 Ga0451802_0022625_578_1291 222
182 3300041486 Ga0451807_1247630 Ga0451807_1247630_202_915 222
183 3300041494 Ga0451837_0619771 Ga0451837_0619771_18_698 222
184 3300041494 Ga0451837_1442167 Ga0451837_1442167_104_817 222
185 3300041509 Ga0451843_0986995 Ga0451843_0986995_231_944 222
186 3300041997 Ga0439431_0015337 Ga0439431_0015337_157_870 222
187 3300042004 Ga0439445_0103666 Ga0439445_0103666_31_753 222
188 3300046453 Ga0495627_030577 Ga0495627_030577_102_821 222
189 3300046460 Ga0495638_0032168 Ga0495638_0032168_2318_3010 222
190 3300046460 Ga0495638_0080241 Ga0495638_0080241_1210_1923 222
191 3300046501 Ga0495607_0048056 Ga0495607_0048056_1192_1905 222
192 3300046507 Ga0495606_0024412 Ga0495606_0024412_1193_1906 222
193 3300046512 Ga0495610_0027653 Ga0495610_0027653_706_1386 222
194 3300046512 Ga0495610_0106476 Ga0495610_0106476_135_848 222
195 3300046512 Ga0495610_0166697 Ga0495610_0166697_27_719 222
196 3300046513 Ga0495616_0168136 Ga0495616_0168136_119_832 222
197 3300046518 Ga0495631_0046377 Ga0495631_0046377_294_974 222
198 3300046522 Ga0495643_0025387 Ga0495643_0025387_1519_2199 222
199 3300046525 Ga0495663_0002466 Ga0495663_0002466_849_1562 222
200 3300046525 Ga0495663_0013363 Ga0495663_0013363_487_1323 222
201 3300046525 Ga0495663_0024755 Ga0495663_0024755_251_943 222
202 3300046558 Ga0495633_0011547 Ga0495633_0011547_1832_2548 222
203 3300046558 Ga0495633_0030349 Ga0495633_0030349_320_1009 222
204 3300046558 Ga0495633_0155101 Ga0495633_0155101_156_848 222
205 3300046660 Ga0495625_0062861 Ga0495625_0062861_1585_2292 222
206 3300046660 Ga0495625_0180188 Ga0495625_0180188_131_811 222
207 3300046692 Ga0495671_0011201 Ga0495671_0011201_997_1710 222
208 3300046810 Ga0495660_0069444 Ga0495660_0069444_901_1581 222
209 3300047320 Ga0495672_0000105 Ga0495672_0000105_131620_132300 222
210 3300047472 Ga0495686_0032227 Ga0495686_0032227_1228_1908 222
211 3300048903 Ga0496100_0281895 Ga0496100_0281895_162_884 222
212 3300048907 Ga0496104_0383900 Ga0496104_0383900_285_977 222
213 3300048908 Ga0496105_0378781 Ga0496105_0378781_252_944 222
214 3300048916 Ga0496113_0096810 Ga0496113_0096810_1350_2042 222
215 3300048916 Ga0496113_0215181 Ga0496113_0215181_474_1190 222
216 3300048919 Ga0496116_0046428 Ga0496116_0046428_54_746 222
217 3300048919 Ga0496116_0087234 Ga0496116_0087234_780_1460 222
218 3300048920 Ga0496117_0001191 Ga0496117_0001191_36523_37239 222
219 3300048920 Ga0496117_0002104 Ga0496117_0002104_215_907 222
220 3300048920 Ga0496117_0006034 Ga0496117_0006034_10076_10768 222
221 3300048920 Ga0496117_0006273 Ga0496117_0006273_289_1029 222
222 3300048920 Ga0496117_0124395 Ga0496117_0124395_217_897 222
223 3300048921 Ga0496118_0000858 Ga0496118_0000858_2215_2907 222
224 3300048921 Ga0496118_0003962 Ga0496118_0003962_1713_2405 222
225 3300048921 Ga0496118_0038845 Ga0496118_0038845_341_1081 222
226 3300048921 Ga0496118_0107032 Ga0496118_0107032_1000_1680 222
227 3300048921 Ga0496118_0110214 Ga0496118_0110214_42_758 222
228 3300048921 Ga0496118_0158572 Ga0496118_0158572_582_1274 222
229 3300048921 Ga0496118_0160167 Ga0496118_0160167_220_909 222
230 3300048921 Ga0496118_0194641 Ga0496118_0194641_287_979 222
231 3300048922 Ga0496119_0001416 Ga0496119_0001416_24489_25181 222
232 3300048922 Ga0496119_0002285 Ga0496119_0002285_18641_19357 222
233 3300048923 Ga0496120_0000181 Ga0496120_0000181_104231_104923 222
234 3300048923 Ga0496120_0000676 Ga0496120_0000676_1903_2619 222
235 3300048924 Ga0496121_0067149 Ga0496121_0067149_318_1010 222
236 3300048924 Ga0496121_0180999 Ga0496121_0180999_129_821 222
237 3300048924 Ga0496121_0213177 Ga0496121_0213177_333_1025 222
238 3300048925 Ga0496122_0002028 Ga0496122_0002028_2490_3206 222
239 3300048925 Ga0496122_0017646 Ga0496122_0017646_4883_5596 222
240 3300048925 Ga0496122_0027894 Ga0496122_0027894_218_910 222
241 3300048925 Ga0496122_0040596 Ga0496122_0040596_218_910 222
242 3300048925 Ga0496122_0051406 Ga0496122_0051406_1949_2674 222
243 3300048925 Ga0496122_0096227 Ga0496122_0096227_530_1222 222
244 3300048925 Ga0496122_0211949 Ga0496122_0211949_186_866 222
245 3300048926 Ga0496123_0012103 Ga0496123_0012103_2201_2917 222
246 3300048926 Ga0496123_0012872 Ga0496123_0012872_6175_6867 222
247 3300048926 Ga0496123_0021836 Ga0496123_0021836_1471_2196 222
248 3300048926 Ga0496123_0039084 Ga0496123_0039084_2069_2761 222
249 3300048926 Ga0496123_0051459 Ga0496123_0051459_1598_2290 222
250 3300048926 Ga0496123_0066745 Ga0496123_0066745_519_1232 222
251 3300048926 Ga0496123_0217502 Ga0496123_0217502_68_748 222
252 3300048927 Ga0496124_0000009 Ga0496124_0000009_563055_563768 222
253 3300048927 Ga0496124_0001061 Ga0496124_0001061_40803_41519 222
254 3300048927 Ga0496124_0004084 Ga0496124_0004084_15019_15699 222
255 3300048927 Ga0496124_0005543 Ga0496124_0005543_1633_2373 222
256 3300048927 Ga0496124_0025087 Ga0496124_0025087_3009_3749 222
257 3300048927 Ga0496124_0033480 Ga0496124_0033480_2135_2827 222
258 3300048927 Ga0496124_0074574 Ga0496124_0074574_1943_2635 222
259 3300048927 Ga0496124_0111113 Ga0496124_0111113_1299_1991 222
260 3300048928 Ga0496125_0002711 Ga0496125_0002711_20147_20839 222
261 3300048928 Ga0496125_0096994 Ga0496125_0096994_1134_1865 222
262 3300048928 Ga0496125_0121359 Ga0496125_0121359_958_1650 222
263 3300048928 Ga0496125_0126345 Ga0496125_0126345_192_884 222
264 3300048928 Ga0496125_0260737 Ga0496125_0260737_168_860 222
265 3300048929 Ga0496126_0004409 Ga0496126_0004409_2202_2894 222
266 3300048929 Ga0496126_0313016 Ga0496126_0313016_301_1029 222
267 3300049571 Ga0501034_0000344 Ga0501034_0000344_74869_75585 222
268 3300049571 Ga0501034_0001973 Ga0501034_0001973_22054_22767 222
269 3300049571 Ga0501034_0019907 Ga0501034_0019907_2193_2906 222
270 3300050491 nmdc:mga00v17_238412_c1 nmdc:mga00v17_238412_c1_264_944 222
271 3300050491 nmdc:mga00v17_242945_c1 nmdc:mga00v17_242945_c1_255_971 222
272 3300050491 nmdc:mga00v17_38111_c1 nmdc:mga00v17_38111_c1_664_1344 222
273 3300053161 Ga0500634_0000098 Ga0500634_0000098_13939_14658 222
274 3300053734 Ga0500565_007922 Ga0500565_007922_294_986 222
275 iso_pu_bacteria 2576861471 2578458488 222
276 iso_pu_bacteria 2747842501 2748019474 222
277 iso_pu_bacteria 2842780639 2842780768 222
278 iso_pu_bacteria 2857442823 2857443753 222
279 iso_pu_bacteria 2919130084 2919131692 222
280 iso_pu_bacteria 2919513703 2919514569 222
281 iso_pu_bacteria 2919675420 2919676611 222
282 iso_pu_bacteria 2923516293 2923518460 222
283 iso_pu_bacteria 2929195423 2929197938 222
284 iso_pu_bacteria 2939622612 2939623515 222
285 iso_pu_bacteria 2941475908 2941478243 222
286 iso_pu_bacteria 2977247770 2977249775 222
287 iso_pu_bacteria 2984514374 2984515736 222
288 iso_pu_bacteria 2987605356 2987606355 222
289 iso_pu_bacteria 8002869464 8002872216 222
290 iso_pu_bacteria 8003014200 8003015915 222
291 iso_pu_bacteria 8021622325 8021624249 222
292 iso_pu_bacteria 8021626552 8021626620 222
293 iso_pu_bacteria 8021648035 8021649084 222
294 2162886007 SwRhRL2b_contig_1501249 SwRhRL2b_0301.00000040 223
295 3300003781 Ga0055536_1008383 Ga0055536_10083833 223
296 3300005289 Ga0065704_10000898 Ga0065704_100008987 223
297 3300005347 Ga0070668_100022273 Ga0070668_1000222733 223
298 3300005355 Ga0070671_100019708 Ga0070671_1000197084 223
299 3300005548 Ga0070665_100514788 Ga0070665_1005147882 223
300 3300005578 Ga0068854_100215924 Ga0068854_1002159242 223
301 3300006051 Ga0075364_10019604 Ga0075364_100196042 223
302 3300009036 Ga0105244_10065310 Ga0105244_100653103 223
303 3300013100 Ga0157373_10070228 Ga0157373_100702284 223
304 3300013102 Ga0157371_10192548 Ga0157371_101925482 223
305 3300013104 Ga0157370_10397027 Ga0157370_103970272 223
306 3300017792 Ga0163161_10105356 Ga0163161_101053563 223
307 3300025292 Ga0209676_1000068 Ga0209676_1000068153 223
308 3300025292 Ga0209676_1000086 Ga0209676_1000086196 223
309 3300025931 Ga0207644_10000313 Ga0207644_1000031312 223
310 3300025935 Ga0207709_10000632 Ga0207709_1000063217 223
311 3300025972 Ga0207668_10029497 Ga0207668_100294973 223
312 3300027312 Ga0209371_1000004 Ga0209371_100000446 223
313 3300028379 Ga0268266_10433010 Ga0268266_104330101 223
314 3300030500 Ga0268256_1000005 Ga0268256_1000005999 223
315 3300030744 Ga0316181_1003585 Ga0316181_10035852 223
316 3300030745 Ga0316182_1165211 Ga0316182_11652112 223
317 3300031911 Ga0307412_10002168 Ga0307412_100021681 223
318 3300032004 Ga0307414_10290297 Ga0307414_102902972 223
319 3300037312 Ga0395899_0036257 Ga0395899_0036257_554_1225 223
320 3300037418 Ga0395900_0168608 Ga0395900_0168608_139_810 223
321 3300037466 Ga0395898_0124446 Ga0395898_0124446_154_825 223
322 3300037471 Ga0395905_0029664 Ga0395905_0029664_4191_4862 223
323 3300037471 Ga0395905_0342375 Ga0395905_0342375_411_1082 223
324 3300038443 Ga0395901_0767004 Ga0395901_0767004_138_854 223
325 3300039145 Ga0237816_03045 Ga0237816_03045_142_861 223
326 3300041413 Ga0439465_0019432 Ga0439465_0019432_1343_2014 223
327 3300042007 Ga0439449_0009034 Ga0439449_0009034_2864_3535 223
328 3300042115 Ga0450911_001698 Ga0450911_001698_390_1118 223
329 3300046460 Ga0495638_0312872 Ga0495638_0312872_40_771 223
330 3300046525 Ga0495663_0003604 Ga0495663_0003604_420_1148 223
331 3300046525 Ga0495663_0010019 Ga0495663_0010019_1596_2318 223
332 3300046558 Ga0495633_0004426 Ga0495633_0004426_7873_8595 223
333 3300046558 Ga0495633_0036944 Ga0495633_0036944_440_1168 223
334 3300048909 Ga0496106_0036405 Ga0496106_0036405_424_1152 223
335 3300048911 Ga0496108_0154008 Ga0496108_0154008_811_1527 223
336 3300048912 Ga0496109_0023787 Ga0496109_0023787_3353_4069 223
337 3300048915 Ga0496112_0367314 Ga0496112_0367314_633_1349 223
338 3300048916 Ga0496113_0010127 Ga0496113_0010127_1834_2550 223
339 3300048919 Ga0496116_0004153 Ga0496116_0004153_3811_4539 223
340 3300048920 Ga0496117_0187846 Ga0496117_0187846_397_1125 223
341 3300048921 Ga0496118_0038534 Ga0496118_0038534_21_749 223
342 3300048922 Ga0496119_0041396 Ga0496119_0041396_2111_2839 223
343 3300048923 Ga0496120_0221136 Ga0496120_0221136_194_865 223
344 3300048924 Ga0496121_0032921 Ga0496121_0032921_442_1170 223
345 3300048925 Ga0496122_0065776 Ga0496122_0065776_224_895 223
346 3300048926 Ga0496123_0102283 Ga0496123_0102283_879_1607 223
347 3300048926 Ga0496123_0232048 Ga0496123_0232048_218_889 223
348 3300048927 Ga0496124_0586130 Ga0496124_0586130_36_707 223
349 3300048928 Ga0496125_0032825 Ga0496125_0032825_802_1530 223
350 3300048928 Ga0496125_0036329 Ga0496125_0036329_216_935 223
351 3300049571 Ga0501034_0777744 Ga0501034_0777744_50_778 223
352 3300050491 nmdc:mga00v17_542_c1 nmdc:mga00v17_542_c1_2592_3320 223
353 iso_pu_bacteria 2547132130 2547499410 223
354 iso_pu_bacteria 2547132130 2547503011 223
355 iso_pu_bacteria 2643221579 2643907783 223
356 iso_pu_bacteria 2643221581 2643916011 223
357 iso_pu_bacteria 2842391507 2842393045 223
358 iso_pu_bacteria 2842757796 2842760222 223
359 iso_pu_bacteria 2874220319 2874221548 223
360 iso_pu_bacteria 2895498888 2895500731 223
361 iso_pu_bacteria 2895511927 2895516399 223
362 iso_pu_bacteria 2895522137 2895523682 223
363 iso_pu_bacteria 2895525241 2895526737 223
364 iso_pu_bacteria 2919089067 2919089785 223
365 iso_pu_bacteria 2919134579 2919137722 223
366 iso_pu_bacteria 2937610967 2937612366 223
367 iso_pu_bacteria 2939626828 2939630892 223
368 iso_pu_bacteria 2961047084 2961048315 223
369 iso_pu_bacteria 2961064222 2961065313 223

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05173

DapB_C

Dihydrodipicolinate reductase, C-terminus

160

274

0.96

PF01113

DapB_N

Dihydrodipicolinate reductase, N-terminus

43

157

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5us6-assembly1.cif.gz_D structure of dihydrodipicolinate reductase from vibrio vulnificus bound to nadh and 2,6 pyridine dicarboxylic acid with intact polyhistidine tag 0.8895 2 222
3ijp-assembly1.cif.gz_B crystal structure of dihydrodipicolinate reductase from bartonella henselae at 2.0a resolution 0.8822 1 222
5us6-assembly2.cif.gz_H structure of dihydrodipicolinate reductase from vibrio vulnificus bound to nadh and 2,6 pyridine dicarboxylic acid with intact polyhistidine tag 0.8819 2 222
5us6-assembly1.cif.gz_D structure of dihydrodipicolinate reductase from vibrio vulnificus bound to nadh and 2,6 pyridine dicarboxylic acid with intact polyhistidine tag 0.8783 2 222
3ijp-assembly1.cif.gz_B crystal structure of dihydrodipicolinate reductase from bartonella henselae at 2.0a resolution 0.8748 1 222
ID Description Score Start End Superfamily
3ijpB02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9513 108 191 3.30.360.10
6bdxA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9463 108 191 3.30.360.10
1vm6D02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9447 108 191 3.30.360.10
3qy9A02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9274 108 191 3.30.360.10
1vm6D02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9123 108 191 3.30.360.10
ID Description Score Start End GO Terms
AF-B4SHT7-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8) 0.9892 2 223 GO:0005829
GO:0008839
GO:0009089
GO:0016726
GO:0019877
GO:0050661
GO:0051287
AF-B4SHT7-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8) 0.9805 2 223 GO:0005829
GO:0008839
GO:0009089
GO:0016726
GO:0019877
GO:0050661
GO:0051287
AF-A0A1G4ALW2-F1-model_v4 deleted 0.977 16 183
AF-A0A1C3TNF8-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8) 0.968 1 223 GO:0005829
GO:0008839
GO:0009089
GO:0016726
GO:0019877
GO:0050661
GO:0051287
AF-A0A2R7QFL2-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) 0.9638 1 157 GO:0005829
GO:0008839
GO:0009089
GO:0019877

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