F425259

General Info

Members Datasets Scaffolds Average Seq Length
370 205 740 443

Family's Representative Sequence

Representative Sequence 3300003791|Ga0055530_10000428|Ga0055530_1000042838
Length 476
Sequence MKPFRNLRAVMGQLFRPCLIPCLGQNGARLDGDMAAGVQARVLIVARDDSAAGPLAEGLDRLGWRTVTARSEAAAAAALSDLQIQAAIIDLADMDESAVGLADRLRAACAPRRLPIMAMGAPDPFQKDHGYDLTLASPLHPAQAAMRLESLVRTAVAEEEFEVRVETFAERGHTLDAPEADPHAFRVLAIGEPAPQFLALSNALQRNGAEVVGAFTAFTAFDYLHERPFDAVVLWAGDNPHEALSIAAGLRRNTRLYHTPALLYMRAESAVTAAEAYHRGISDVASPETPESETALRVVELARAFRRQKAVRAALEQARGSGLMDAATGLFTRDLFAGHLMRLARGARERNRPLSVCMLKVAEKPDLKAPRAGGWVARAVPQIGSMIGRLVRVEDTAARLAPEVFALALPATPLHAARSAGERIAAVIGCTAFEAGQGATPFVVEFDLGVAEVASPESVGYALEQAAAMAHTLKAS

Samples

Sample ID Description Type Environment
1 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
46 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
87 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
102 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
103 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
104 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
107 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
110 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
111 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
115 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
116 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
117 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
118 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
119 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
122 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
127 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
137 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
149 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
150 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
151 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
152 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
153 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
154 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
155 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
156 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
157 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
158 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
159 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
160 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
161 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
162 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
163 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
164 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
165 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
166 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
167 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
168 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
169 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
172 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
173 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
174 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
175 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
176 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
177 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
178 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
179 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
180 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
181 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
182 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
183 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
184 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
185 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
186 2643221583 Caulobacter sp. Root655 Isolate Unclassified
187 2643221584 Caulobacter sp. Root656 Isolate Unclassified
188 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
189 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
190 2643221640 Caulobacter sp. Root342 Isolate Unclassified
191 2643221642 Caulobacter sp. Root343 Isolate Unclassified
192 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
193 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
194 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
195 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
196 2818991435 Caulobacter henricii 536 Isolate Unclassified
197 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
198 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
199 2849560528 Caulobacter zeae 410 Isolate Unclassified
200 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
201 2851153111 Caulobacter radicis 736 Isolate Unclassified
202 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
203 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
204 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
205 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.7
Metatranscriptomes 0
Isolates 7.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.97
Nodule 0.27
Rhizoplane 2.16
Rhizosphere 64.05
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055530_10000428 3300003791 Bacteria 37259
2 Ga0055536_1001069 3300003781 Bacteria 17266
3 Ga0055536_1001070 3300003781 Bacteria 17254
4 Ga0055528_1005829 3300003790 Bacteria 5662
5 Ga0055530_10006051 3300003791 Bacteria 5530
6 Ga0055531_10001432 3300003794 Bacteria 17623
7 Ga0055531_10001483 3300003794 Bacteria 17266
8 Ga0055531_10007769 3300003794 Bacteria 5782
9 Ga0065165_1000277 3300005262 Bacteria 87540
10 Ga0065165_1000615 3300005262 Bacteria 51725
11 Ga0070670_100000037 3300005331 Bacteria 156070
12 Ga0070670_100024118 3300005331 Bacteria 5233
13 Ga0070680_100002034 3300005336 Bacteria 14936
14 Ga0070660_100005896 3300005339 Bacteria 8478
15 Ga0070668_100001716 3300005347 Bacteria 15917
16 Ga0070668_100003334 3300005347 Bacteria 11844
17 Ga0070668_100009077 3300005347 Bacteria 7384
18 Ga0070668_100022310 3300005347 Bacteria 4784
19 Ga0070668_100023956 3300005347 Bacteria 4622
20 Ga0070668_100055024 3300005347 Bacteria 3070
21 Ga0070669_100003951 3300005353 Bacteria 10720
22 Ga0070671_100077805 3300005355 Bacteria 2772
23 Ga0070659_100001409 3300005366 Bacteria 17339
24 Ga0070659_100005253 3300005366 Bacteria 9292
25 Ga0070667_100008025 3300005367 Bacteria 8757
26 Ga0070667_100032647 3300005367 Bacteria 4342
27 Ga0070667_100055042 3300005367 Bacteria 3360
28 Ga0070681_10004144 3300005458 Bacteria 13715
29 Ga0070681_10023316 3300005458 Bacteria 6223
30 Ga0070681_10184712 3300005458 Bacteria 2006
31 Ga0070679_100021914 3300005530 Bacteria 6242
32 Ga0070679_100028702 3300005530 Bacteria 5488
33 Ga0068853_100001938 3300005539 Bacteria 15269
34 Ga0070665_100000116 3300005548 Bacteria 150141
35 Ga0070665_100000934 3300005548 Bacteria 37393
36 Ga0070665_100026254 3300005548 Bacteria 5865
37 Ga0070665_100026716 3300005548 Bacteria 5814
38 Ga0070665_100306565 3300005548 Bacteria 1591
39 Ga0068855_100011082 3300005563 Bacteria 10879
40 Ga0068855_100028102 3300005563 Bacteria 6727
41 Ga0068855_100037811 3300005563 Bacteria 5737
42 Ga0068855_100039434 3300005563 Bacteria 5607
43 Ga0068855_100092655 3300005563 Bacteria 3484
44 Ga0070664_100210363 3300005564 Bacteria 1738
45 Ga0068856_100398029 3300005614 Bacteria 1397
46 Ga0068852_100125679 3300005616 Bacteria 2355
47 Ga0068859_100000391 3300005617 Bacteria 43751
48 Ga0068859_100023499 3300005617 Bacteria 6186
49 Ga0068864_100000305 3300005618 Bacteria 43672
50 Ga0068864_100000667 3300005618 Bacteria 28637
51 Ga0068863_100000007 3300005841 Bacteria 257578
52 Ga0068863_100000661 3300005841 Bacteria 34838
53 Ga0068863_100007635 3300005841 Bacteria 10576
54 Ga0068863_100067819 3300005841 Bacteria 3374
55 Ga0068858_100000025 3300005842 Bacteria 160546
56 Ga0068858_100002371 3300005842 Bacteria 19055
57 Ga0068858_100060581 3300005842 Bacteria 3498
58 Ga0068860_100000128 3300005843 Bacteria 122731
59 Ga0068860_100000139 3300005843 Bacteria 119188
60 Ga0068860_100060189 3300005843 Bacteria 3609
61 Ga0068860_100094032 3300005843 Bacteria 2857
62 Ga0068860_100178126 3300005843 Bacteria 2055
63 Ga0068862_100000121 3300005844 Bacteria 91849
64 Ga0068862_100004447 3300005844 Bacteria 11829
65 Ga0068862_100044106 3300005844 Bacteria 3804
66 Ga0068862_100086064 3300005844 Bacteria 2732
67 Ga0068862_100237473 3300005844 Bacteria 1656
68 Ga0070717_10124779 3300006028 Bacteria 2209
69 Ga0075368_10018754 3300006042 Bacteria 2604
70 Ga0075367_10020530 3300006178 Bacteria 3681
71 Ga0075366_10006525 3300006195 Bacteria 6397
72 Ga0097620_100000391 3300006931 Bacteria 43751
73 Ga0097620_100023499 3300006931 Bacteria 6186
74 Ga0079104_1016976 3300006946 Bacteria 2107
75 Ga0105240_10002885 3300009093 Bacteria 27156
76 Ga0105240_10010736 3300009093 Bacteria 12853
77 Ga0105240_10045405 3300009093 Bacteria 5574
78 Ga0105240_10074167 3300009093 Bacteria 4200
79 Ga0105240_10089147 3300009093 Bacteria 3773
80 Ga0105240_10095016 3300009093 Bacteria 3635
81 Ga0105240_10150091 3300009093 Bacteria 2777
82 Ga0105248_10000154 3300009177 Bacteria 80081
83 Ga0105248_10006819 3300009177 Bacteria 12518
84 Ga0105248_10035389 3300009177 Bacteria 5586
85 Ga0105248_10052138 3300009177 Bacteria 4591
86 Ga0105248_10223735 3300009177 Bacteria 2118
87 Ga0105237_10066209 3300009545 Bacteria 3608
88 Ga0105238_10001846 3300009551 Bacteria 21230
89 Ga0105238_10055372 3300009551 Bacteria 3981
90 Ga0105249_10000735 3300009553 Bacteria 29694
91 Ga0105249_10085525 3300009553 Bacteria 2939
92 Ga0157373_10000340 3300013100 Bacteria 37871
93 Ga0157373_10000686 3300013100 Bacteria 26568
94 Ga0163162_10016671 3300013306 Bacteria 7181
95 Ga0157375_10044394 3300013308 Bacteria 4318
96 Ga0163163_10009915 3300014325 Bacteria 8540
97 Ga0163163_10014938 3300014325 Bacteria 7156
98 Ga0163163_10018964 3300014325 Bacteria 6453
99 Ga0163163_10080026 3300014325 Bacteria 3267
100 Ga0163163_10234457 3300014325 Bacteria 1885
101 Ga0157379_10022182 3300014968 Bacteria 5626
102 Ga0157379_10025127 3300014968 Bacteria 5289
103 Ga0213876_10000252 3300021384 Bacteria 50523
104 Ga0213876_10042111 3300021384 Bacteria 2413
105 Ga0213876_10056433 3300021384 Bacteria 2073
106 Ga0209026_1001021 3300025250 Bacteria 13773
107 Ga0209673_1000941 3300025273 Bacteria 36504
108 Ga0209675_1011072 3300025291 Bacteria 3016
109 Ga0209676_1000031 3300025292 Bacteria 478976
110 Ga0209676_1000057 3300025292 Bacteria 361061
111 Ga0209564_1004978 3300025295 Bacteria 7827
112 Ga0209564_1011554 3300025295 Bacteria 3943
113 Ga0209758_1001813 3300025297 Bacteria 23607
114 Ga0209758_1007312 3300025297 Bacteria 7567
115 Ga0209758_1019306 3300025297 Bacteria 3292
116 Ga0209050_1000135 3300025298 Bacteria 184020
117 Ga0209050_1000200 3300025298 Bacteria 134115
118 Ga0209050_1000522 3300025298 Bacteria 63985
119 Ga0209256_1000641 3300025299 Bacteria 47608
120 Ga0209256_1003933 3300025299 Bacteria 9787
121 Ga0209256_1015188 3300025299 Bacteria 2710
122 Ga0209051_1000720 3300025303 Bacteria 36140
123 Ga0209257_1000050 3300025304 Bacteria 439325
124 Ga0209257_1000225 3300025304 Bacteria 134023
125 Ga0209257_1000350 3300025304 Bacteria 95008
126 Ga0209257_1000514 3300025304 Bacteria 67345
127 Ga0209257_1003395 3300025304 Bacteria 13737
128 Ga0207705_10000424 3300025909 Bacteria 36897
129 Ga0207705_10099170 3300025909 Bacteria 2141
130 Ga0207707_10005415 3300025912 Bacteria 11161
131 Ga0207707_10047169 3300025912 Bacteria 3752
132 Ga0207707_10140575 3300025912 Bacteria 2111
133 Ga0207695_10000939 3300025913 Bacteria 51994
134 Ga0207695_10001976 3300025913 Bacteria 31706
135 Ga0207695_10004394 3300025913 Bacteria 19271
136 Ga0207695_10090892 3300025913 Bacteria 3067
137 Ga0207660_10001199 3300025917 Bacteria 17379
138 Ga0207660_10025294 3300025917 Bacteria 4028
139 Ga0207657_10000735 3300025919 Bacteria 34755
140 Ga0207657_10038432 3300025919 Bacteria 4261
141 Ga0207652_10017825 3300025921 Bacteria 5817
142 Ga0207681_10014317 3300025923 Bacteria 4926
143 Ga0207694_10021586 3300025924 Bacteria 4879
144 Ga0207694_10035288 3300025924 Bacteria 3836
145 Ga0207650_10000099 3300025925 Bacteria 113522
146 Ga0207650_10019028 3300025925 Bacteria 4826
147 Ga0207650_10045116 3300025925 Bacteria 3243
148 Ga0207687_10056809 3300025927 Bacteria 2746
149 Ga0207690_10001563 3300025932 Bacteria 14344
150 Ga0207690_10002330 3300025932 Bacteria 11550
151 Ga0207690_10012350 3300025932 Bacteria 5109
152 Ga0207711_10000574 3300025941 Bacteria 37451
153 Ga0207711_10002352 3300025941 Bacteria 16943
154 Ga0207711_10010246 3300025941 Bacteria 7782
155 Ga0207711_10062644 3300025941 Bacteria 3208
156 Ga0207711_10160395 3300025941 Bacteria 2035
157 Ga0207679_10138438 3300025945 Bacteria 1964
158 Ga0207667_10005948 3300025949 Bacteria 14852
159 Ga0207667_10021126 3300025949 Bacteria 7219
160 Ga0207667_10038903 3300025949 Bacteria 5073
161 Ga0207667_10172376 3300025949 Bacteria 2224
162 Ga0207712_10000415 3300025961 Bacteria 36527
163 Ga0207668_10000078 3300025972 Bacteria 73213
164 Ga0207668_10000494 3300025972 Bacteria 24645
165 Ga0207668_10004835 3300025972 Bacteria 7931
166 Ga0207668_10011391 3300025972 Bacteria 5401
167 Ga0207668_10038428 3300025972 Bacteria 3212
168 Ga0207668_10072343 3300025972 Bacteria 2466
169 Ga0207658_10000876 3300025986 Bacteria 25078
170 Ga0207658_10007288 3300025986 Bacteria 7543
171 Ga0207703_10000424 3300026035 Bacteria 44811
172 Ga0207703_10015826 3300026035 Bacteria 5883
173 Ga0207703_10044240 3300026035 Bacteria 3578
174 Ga0207703_10051557 3300026035 Bacteria 3336
175 Ga0207639_10043366 3300026041 Bacteria 3377
176 Ga0207702_10094326 3300026078 Bacteria 2627
177 Ga0207641_10000012 3300026088 Bacteria 375486
178 Ga0207641_10017211 3300026088 Bacteria 5914
179 Ga0207641_10080607 3300026088 Bacteria 2824
180 Ga0207676_10000360 3300026095 Bacteria 38926
181 Ga0207676_10039794 3300026095 Bacteria 3599
182 Ga0207683_10063523 3300026121 Bacteria 3252
183 Ga0207683_10296190 3300026121 Bacteria 1480
184 Ga0209999_1004843 3300027543 Bacteria 2421
185 Ga0209983_1007971 3300027665 Bacteria 2167
186 Ga0268266_10000064 3300028379 Bacteria 249533
187 Ga0268266_10001286 3300028379 Bacteria 30580
188 Ga0268266_10029491 3300028379 Bacteria 4663
189 Ga0268265_10001672 3300028380 Bacteria 18106
190 Ga0268265_10106619 3300028380 Bacteria 2276
191 Ga0268264_10000046 3300028381 Bacteria 364597
192 Ga0268264_10000059 3300028381 Bacteria 306927
193 Ga0268264_10144185 3300028381 Bacteria 2127
194 Ga0307517_10020919 3300028786 Bacteria 8301
195 Ga0307517_10036363 3300028786 Bacteria 5541
196 Ga0307515_10145137 3300028794 Bacteria 2518
197 Ga0265338_10030456 3300028800 Bacteria 5316
198 Ga0265327_10000166 3300031251 Bacteria 141539
199 Ga0265327_10001531 3300031251 Bacteria 28533
200 Ga0265327_10015788 3300031251 Bacteria 4847
201 Ga0265327_10018411 3300031251 Bacteria 4331
202 Ga0307513_10000448 3300031456 Bacteria 59427
203 Ga0307513_10008912 3300031456 Bacteria 12755
204 Ga0307513_10066568 3300031456 Bacteria 3784
205 Ga0265314_10112084 3300031711 Bacteria 1732
206 Ga0307516_10000004 3300031730 Bacteria 367451
207 Ga0307413_10085196 3300031824 Bacteria 2040
208 Ga0307510_10006491 3300033180 Bacteria 13952
209 Ga0373935_0114605 3300035692 Bacteria 1793
210 Ga0373927_0001900 3300035695 Bacteria 15438
211 Ga0373925_0002292 3300037068 Bacteria 15488
212 Ga0395899_0000407 3300037312 Bacteria 50216
213 Ga0395900_0000009 3300037418 Bacteria 476249
214 Ga0395900_0017306 3300037418 Bacteria 7357
215 Ga0395898_0002452 3300037466 Bacteria 21910
216 Ga0395905_0071372 3300037471 Bacteria 3255
217 Ga0395905_0082460 3300037471 Bacteria 3013
218 Ga0395905_0083988 3300037471 Bacteria 2983
219 Ga0395901_0000014 3300038443 Bacteria 375100
220 Ga0395901_0062781 3300038443 Bacteria 3866
221 Ga0395901_0105189 3300038443 Bacteria 2962
222 Ga0436365_0126950 3300039437 Bacteria 2813
223 Ga0436365_1185186 3300039437 Bacteria 3377
224 Ga0436365_1271990 3300039437 Bacteria 14367
225 Ga0439441_010936 3300042001 Bacteria 1532
226 Ga0439446_0000711 3300042156 Bacteria 6958
227 Ga0495627_000218 3300046453 Bacteria 62342
228 Ga0495590_0001334 3300046457 Bacteria 10734
229 Ga0495638_0000371 3300046460 Bacteria 55687
230 Ga0495638_0009470 3300046460 Bacteria 6832
231 Ga0495638_0025576 3300046460 Bacteria 3834
232 Ga0495638_0037772 3300046460 Bacteria 3071
233 Ga0495650_0000007 3300046471 Bacteria 718072
234 Ga0495583_0000037 3300046506 Bacteria 244437
235 Ga0495583_0010710 3300046506 Bacteria 5324
236 Ga0495606_0001606 3300046507 Bacteria 29482
237 Ga0495610_0000040 3300046512 Bacteria 165165
238 Ga0495616_0000026 3300046513 Bacteria 141705
239 Ga0495616_0030913 3300046513 Bacteria 2809
240 Ga0495632_0008835 3300046519 Bacteria 6132
241 Ga0495637_0030598 3300046520 Bacteria 2387
242 Ga0495643_0011160 3300046522 Bacteria 5490
243 Ga0495648_0007355 3300046524 Bacteria 8821
244 Ga0495642_0017444 3300046528 Bacteria 2804
245 Ga0495642_0042921 3300046528 Bacteria 1844
246 Ga0495654_0000095 3300046530 Bacteria 100179
247 Ga0495597_0007193 3300046542 Bacteria 5675
248 Ga0495622_0002434 3300046557 Bacteria 9034
249 Ga0495668_0000019 3300046616 Bacteria 416042
250 Ga0495668_0007531 3300046616 Bacteria 6948
251 Ga0495668_0011632 3300046616 Bacteria 5262
252 Ga0495668_0014195 3300046616 Bacteria 4679
253 Ga0495625_0000080 3300046660 Bacteria 156895
254 Ga0495625_0001302 3300046660 Bacteria 31201
255 Ga0495625_0004500 3300046660 Bacteria 13147
256 Ga0495588_0038770 3300046674 Bacteria 2425
257 Ga0495669_0000024 3300046684 Bacteria 113943
258 Ga0495669_0000114 3300046684 Bacteria 52644
259 Ga0495669_0043351 3300046684 Bacteria 2003
260 Ga0495613_0001020 3300046689 Bacteria 21309
261 Ga0495589_0007600 3300046794 Bacteria 5679
262 Ga0495672_0010846 3300047320 Bacteria 6464
263 Ga0495672_0025397 3300047320 Bacteria 3793
264 Ga0495687_030633 3300047443 Bacteria 2476
265 Ga0495673_0000132 3300047469 Bacteria 138001
266 Ga0495673_0000401 3300047469 Bacteria 50743
267 Ga0495673_0010543 3300047469 Bacteria 5018
268 Ga0495686_0000259 3300047472 Bacteria 94672
269 Ga0495686_0003985 3300047472 Bacteria 12361
270 Ga0495686_0016417 3300047472 Bacteria 5021
271 Ga0496102_0270630 3300048905 Bacteria 1602
272 Ga0496103_0031376 3300048906 Bacteria 3237
273 Ga0496107_0000023 3300048910 Bacteria 125918
274 Ga0496109_0195456 3300048912 Bacteria 1901
275 Ga0496112_0114387 3300048915 Bacteria 2669
276 Ga0496115_0004462 3300048918 Bacteria 10138
277 Ga0496115_0018240 3300048918 Bacteria 5383
278 Ga0496115_0041001 3300048918 Bacteria 3682
279 Ga0496118_0002270 3300048921 Bacteria 26276
280 Ga0496121_0000009 3300048924 Bacteria 836971
281 Ga0496121_0013338 3300048924 Bacteria 8843
282 Ga0496122_0123983 3300048925 Bacteria 1659
283 Ga0496125_0059539 3300048928 Bacteria 3077
284 Ga0496125_0065249 3300048928 Bacteria 2886
285 Ga0496126_0048113 3300048929 Bacteria 3900
286 Ga0495678_021403 3300049459 Bacteria 2848
287 Ga0501034_0002163 3300049571 Bacteria 24368
288 Ga0501037_0003171 3300049573 Bacteria 11939
289 Ga0501047_0035476 3300049581 Bacteria 4819
290 Ga0501047_0157550 3300049581 Bacteria 2143
291 Ga0501044_0001452 3300049823 Bacteria 27850
292 Ga0501044_0004219 3300049823 Bacteria 16143
293 nmdc:mga03n38_22294_c1 3300050490 Bacteria 2561
294 nmdc:mga0k408_46303_c1 3300050493 Bacteria 2511
295 nmdc:mga06z11_4938_c1 3300050494 Bacteria 5293
296 nmdc:mga04h51_5758_c1 3300050495 Bacteria 3174
297 nmdc:mga0sz30_7815_c1 3300050516 Bacteria 4021
298 Ga0500635_0000054 3300053080 Bacteria 74486
299 Ga0500578_0000008 3300053086 Bacteria 223557
300 Ga0500578_0079826 3300053086 Bacteria 2082
301 Ga0500643_000693 3300053087 Bacteria 22498
302 Ga0500643_000874 3300053087 Bacteria 19107
303 Ga0500643_008365 3300053087 Bacteria 4067
304 Ga0500644_0000785 3300053088 Bacteria 10849
305 Ga0500651_0049569 3300053093 Bacteria 2637
306 Ga0500566_0116100 3300053094 Bacteria 1449
307 Ga0500641_0000656 3300053096 Bacteria 12464
308 Ga0500554_007193 3300053102 Bacteria 2545
309 Ga0500555_001790 3300053103 Bacteria 6412
310 Ga0500556_0000178 3300053104 Bacteria 52397
311 Ga0500556_0000757 3300053104 Bacteria 19241
312 Ga0500556_0005049 3300053104 Bacteria 3734
313 Ga0500562_007458 3300053108 Bacteria 2760
314 Ga0500562_012057 3300053108 Bacteria 2195
315 Ga0500569_001894 3300053109 Bacteria 4034
316 Ga0500594_0004371 3300053118 Bacteria 3114
317 Ga0500595_004058 3300053119 Bacteria 6659
318 Ga0500595_008223 3300053119 Bacteria 4276
319 Ga0500608_000154 3300053122 Bacteria 28470
320 Ga0500614_004320 3300053123 Bacteria 3012
321 Ga0500614_006318 3300053123 Bacteria 2488
322 Ga0500618_000034 3300053125 Bacteria 120560
323 Ga0500559_0000005 3300053136 Bacteria 230231
324 Ga0500559_0000040 3300053136 Bacteria 106740
325 Ga0500559_0005381 3300053136 Bacteria 5893
326 Ga0500559_0005532 3300053136 Bacteria 5804
327 Ga0500559_0006032 3300053136 Bacteria 5498
328 Ga0500564_000021 3300053138 Bacteria 47765
329 Ga0500577_0000624 3300053142 Bacteria 9075
330 Ga0500616_0012714 3300053153 Bacteria 4919
331 Ga0500620_019045 3300053155 Bacteria 2011
332 Ga0500622_0000437 3300053156 Bacteria 39563
333 Ga0500622_0008912 3300053156 Bacteria 5582
334 Ga0500624_001821 3300053157 Bacteria 3088
335 Ga0500636_0009021 3300053177 Bacteria 5794
336 Ga0500636_0009374 3300053177 Bacteria 5687
337 Ga0500637_0033101 3300053178 Bacteria 2885
338 Ga0500645_000184 3300053730 Bacteria 48312
339 Ga0500645_001683 3300053730 Bacteria 10816
340 Ga0500645_002252 3300053730 Bacteria 8781
341 Ga0500645_035559 3300053730 Bacteria 1483
342 Ga0500609_000156 3300053731 Bacteria 9356
343 Ga0500596_002059 3300053735 Bacteria 4005
344 2511122748 2510917020 Bacteria 5657507
345 2585148550 2582581279 Bacteria 4980720
346 2585153839 2582581280 Bacteria 5994497
347 2585198052 2582581293 Bacteria 5907401
348 2587916402 2585428106 Bacteria 5179711
349 2643747840 2643221545 Bacteria 5083237
350 2643778494 2643221552 Bacteria 5708754
351 2643924906 2643221583 Bacteria 5218014
352 2643931351 2643221584 Bacteria 5511711
353 2644000104 2643221598 Bacteria 4578346
354 2644085126 2643221614 Bacteria 4260023
355 2644226092 2643221640 Bacteria 5258820
356 2644235580 2643221642 Bacteria 5357871
357 2644342678 2643221661 Bacteria 4267604
358 2644365978 2643221666 Bacteria 4265935
359 2644511454 2643221691 Bacteria 5093099
360 2792463776 2791355048 Bacteria 5832535
361 2819537978 2818991435 Bacteria 5433759
362 2819648461 2818991454 Bacteria 5563326
363 2843747873 2843744320 Bacteria 5659202
364 2849560563 2849560528 Bacteria 5393480
365 2849577070 2849573788 Bacteria 5421256
366 2851153706 2851153111 Bacteria 5542585
367 2857509083 2857504554 Bacteria 5369913
368 2884964923 2884960567 Bacteria 5437054
369 2898329619 2898329390 Bacteria 5168154
370 2928535128 2928531327 Bacteria 5101314
371 Ga0055530_10000428
372 Ga0055536_1001069
373 Ga0055536_1001070
374 Ga0055528_1005829
375 Ga0055530_10006051
376 Ga0055531_10001432
377 Ga0055531_10001483
378 Ga0055531_10007769
379 Ga0065165_1000277
380 Ga0065165_1000615
381 Ga0070670_100000037
382 Ga0070670_100024118
383 Ga0070680_100002034
384 Ga0070660_100005896
385 Ga0070668_100001716
386 Ga0070668_100003334
387 Ga0070668_100009077
388 Ga0070668_100022310
389 Ga0070668_100023956
390 Ga0070668_100055024
391 Ga0070669_100003951
392 Ga0070671_100077805
393 Ga0070659_100001409
394 Ga0070659_100005253
395 Ga0070667_100008025
396 Ga0070667_100032647
397 Ga0070667_100055042
398 Ga0070681_10004144
399 Ga0070681_10023316
400 Ga0070681_10184712
401 Ga0070679_100021914
402 Ga0070679_100028702
403 Ga0068853_100001938
404 Ga0070665_100000116
405 Ga0070665_100000934
406 Ga0070665_100026254
407 Ga0070665_100026716
408 Ga0070665_100306565
409 Ga0068855_100011082
410 Ga0068855_100028102
411 Ga0068855_100037811
412 Ga0068855_100039434
413 Ga0068855_100092655
414 Ga0070664_100210363
415 Ga0068856_100398029
416 Ga0068852_100125679
417 Ga0068859_100000391
418 Ga0068859_100023499
419 Ga0068864_100000305
420 Ga0068864_100000667
421 Ga0068863_100000007
422 Ga0068863_100000661
423 Ga0068863_100007635
424 Ga0068863_100067819
425 Ga0068858_100000025
426 Ga0068858_100002371
427 Ga0068858_100060581
428 Ga0068860_100000128
429 Ga0068860_100000139
430 Ga0068860_100060189
431 Ga0068860_100094032
432 Ga0068860_100178126
433 Ga0068862_100000121
434 Ga0068862_100004447
435 Ga0068862_100044106
436 Ga0068862_100086064
437 Ga0068862_100237473
438 Ga0070717_10124779
439 Ga0075368_10018754
440 Ga0075367_10020530
441 Ga0075366_10006525
442 Ga0097620_100000391
443 Ga0097620_100023499
444 Ga0079104_1016976
445 Ga0105240_10002885
446 Ga0105240_10010736
447 Ga0105240_10045405
448 Ga0105240_10074167
449 Ga0105240_10089147
450 Ga0105240_10095016
451 Ga0105240_10150091
452 Ga0105248_10000154
453 Ga0105248_10006819
454 Ga0105248_10035389
455 Ga0105248_10052138
456 Ga0105248_10223735
457 Ga0105237_10066209
458 Ga0105238_10001846
459 Ga0105238_10055372
460 Ga0105249_10000735
461 Ga0105249_10085525
462 Ga0157373_10000340
463 Ga0157373_10000686
464 Ga0163162_10016671
465 Ga0157375_10044394
466 Ga0163163_10009915
467 Ga0163163_10014938
468 Ga0163163_10018964
469 Ga0163163_10080026
470 Ga0163163_10234457
471 Ga0157379_10022182
472 Ga0157379_10025127
473 Ga0213876_10000252
474 Ga0213876_10042111
475 Ga0213876_10056433
476 Ga0209026_1001021
477 Ga0209673_1000941
478 Ga0209675_1011072
479 Ga0209676_1000031
480 Ga0209676_1000057
481 Ga0209564_1004978
482 Ga0209564_1011554
483 Ga0209758_1001813
484 Ga0209758_1007312
485 Ga0209758_1019306
486 Ga0209050_1000135
487 Ga0209050_1000200
488 Ga0209050_1000522
489 Ga0209256_1000641
490 Ga0209256_1003933
491 Ga0209256_1015188
492 Ga0209051_1000720
493 Ga0209257_1000050
494 Ga0209257_1000225
495 Ga0209257_1000350
496 Ga0209257_1000514
497 Ga0209257_1003395
498 Ga0207705_10000424
499 Ga0207705_10099170
500 Ga0207707_10005415
501 Ga0207707_10047169
502 Ga0207707_10140575
503 Ga0207695_10000939
504 Ga0207695_10001976
505 Ga0207695_10004394
506 Ga0207695_10090892
507 Ga0207660_10001199
508 Ga0207660_10025294
509 Ga0207657_10000735
510 Ga0207657_10038432
511 Ga0207652_10017825
512 Ga0207681_10014317
513 Ga0207694_10021586
514 Ga0207694_10035288
515 Ga0207650_10000099
516 Ga0207650_10019028
517 Ga0207650_10045116
518 Ga0207687_10056809
519 Ga0207690_10001563
520 Ga0207690_10002330
521 Ga0207690_10012350
522 Ga0207711_10000574
523 Ga0207711_10002352
524 Ga0207711_10010246
525 Ga0207711_10062644
526 Ga0207711_10160395
527 Ga0207679_10138438
528 Ga0207667_10005948
529 Ga0207667_10021126
530 Ga0207667_10038903
531 Ga0207667_10172376
532 Ga0207712_10000415
533 Ga0207668_10000078
534 Ga0207668_10000494
535 Ga0207668_10004835
536 Ga0207668_10011391
537 Ga0207668_10038428
538 Ga0207668_10072343
539 Ga0207658_10000876
540 Ga0207658_10007288
541 Ga0207703_10000424
542 Ga0207703_10015826
543 Ga0207703_10044240
544 Ga0207703_10051557
545 Ga0207639_10043366
546 Ga0207702_10094326
547 Ga0207641_10000012
548 Ga0207641_10017211
549 Ga0207641_10080607
550 Ga0207676_10000360
551 Ga0207676_10039794
552 Ga0207683_10063523
553 Ga0207683_10296190
554 Ga0209999_1004843
555 Ga0209983_1007971
556 Ga0268266_10000064
557 Ga0268266_10001286
558 Ga0268266_10029491
559 Ga0268265_10001672
560 Ga0268265_10106619
561 Ga0268264_10000046
562 Ga0268264_10000059
563 Ga0268264_10144185
564 Ga0307517_10020919
565 Ga0307517_10036363
566 Ga0307515_10145137
567 Ga0265338_10030456
568 Ga0265327_10000166
569 Ga0265327_10001531
570 Ga0265327_10015788
571 Ga0265327_10018411
572 Ga0307513_10000448
573 Ga0307513_10008912
574 Ga0307513_10066568
575 Ga0265314_10112084
576 Ga0307516_10000004
577 Ga0307413_10085196
578 Ga0307510_10006491
579 Ga0373935_0114605
580 Ga0373927_0001900
581 Ga0373925_0002292
582 Ga0395899_0000407
583 Ga0395900_0000009
584 Ga0395900_0017306
585 Ga0395898_0002452
586 Ga0395905_0071372
587 Ga0395905_0082460
588 Ga0395905_0083988
589 Ga0395901_0000014
590 Ga0395901_0062781
591 Ga0395901_0105189
592 Ga0436365_0126950
593 Ga0436365_1185186
594 Ga0436365_1271990
595 Ga0439441_010936
596 Ga0439446_0000711
597 Ga0495627_000218
598 Ga0495590_0001334
599 Ga0495638_0000371
600 Ga0495638_0009470
601 Ga0495638_0025576
602 Ga0495638_0037772
603 Ga0495650_0000007
604 Ga0495583_0000037
605 Ga0495583_0010710
606 Ga0495606_0001606
607 Ga0495610_0000040
608 Ga0495616_0000026
609 Ga0495616_0030913
610 Ga0495632_0008835
611 Ga0495637_0030598
612 Ga0495643_0011160
613 Ga0495648_0007355
614 Ga0495642_0017444
615 Ga0495642_0042921
616 Ga0495654_0000095
617 Ga0495597_0007193
618 Ga0495622_0002434
619 Ga0495668_0000019
620 Ga0495668_0007531
621 Ga0495668_0011632
622 Ga0495668_0014195
623 Ga0495625_0000080
624 Ga0495625_0001302
625 Ga0495625_0004500
626 Ga0495588_0038770
627 Ga0495669_0000024
628 Ga0495669_0000114
629 Ga0495669_0043351
630 Ga0495613_0001020
631 Ga0495589_0007600
632 Ga0495672_0010846
633 Ga0495672_0025397
634 Ga0495687_030633
635 Ga0495673_0000132
636 Ga0495673_0000401
637 Ga0495673_0010543
638 Ga0495686_0000259
639 Ga0495686_0003985
640 Ga0495686_0016417
641 Ga0496102_0270630
642 Ga0496103_0031376
643 Ga0496107_0000023
644 Ga0496109_0195456
645 Ga0496112_0114387
646 Ga0496115_0004462
647 Ga0496115_0018240
648 Ga0496115_0041001
649 Ga0496118_0002270
650 Ga0496121_0000009
651 Ga0496121_0013338
652 Ga0496122_0123983
653 Ga0496125_0059539
654 Ga0496125_0065249
655 Ga0496126_0048113
656 Ga0495678_021403
657 Ga0501034_0002163
658 Ga0501037_0003171
659 Ga0501047_0035476
660 Ga0501047_0157550
661 Ga0501044_0001452
662 Ga0501044_0004219
663 nmdc:mga03n38_22294_c1
664 nmdc:mga0k408_46303_c1
665 nmdc:mga06z11_4938_c1
666 nmdc:mga04h51_5758_c1
667 nmdc:mga0sz30_7815_c1
668 Ga0500635_0000054
669 Ga0500578_0000008
670 Ga0500578_0079826
671 Ga0500643_000693
672 Ga0500643_000874
673 Ga0500643_008365
674 Ga0500644_0000785
675 Ga0500651_0049569
676 Ga0500566_0116100
677 Ga0500641_0000656
678 Ga0500554_007193
679 Ga0500555_001790
680 Ga0500556_0000178
681 Ga0500556_0000757
682 Ga0500556_0005049
683 Ga0500562_007458
684 Ga0500562_012057
685 Ga0500569_001894
686 Ga0500594_0004371
687 Ga0500595_004058
688 Ga0500595_008223
689 Ga0500608_000154
690 Ga0500614_004320
691 Ga0500614_006318
692 Ga0500618_000034
693 Ga0500559_0000005
694 Ga0500559_0000040
695 Ga0500559_0005381
696 Ga0500559_0005532
697 Ga0500559_0006032
698 Ga0500564_000021
699 Ga0500577_0000624
700 Ga0500616_0012714
701 Ga0500620_019045
702 Ga0500622_0000437
703 Ga0500622_0008912
704 Ga0500624_001821
705 Ga0500636_0009021
706 Ga0500636_0009374
707 Ga0500637_0033101
708 Ga0500645_000184
709 Ga0500645_001683
710 Ga0500645_002252
711 Ga0500645_035559
712 Ga0500609_000156
713 Ga0500596_002059
714 2511122748
715 2585148550
716 2585153839
717 2585198052
718 2587916402
719 2643747840
720 2643778494
721 2643924906
722 2643931351
723 2644000104
724 2644085126
725 2644226092
726 2644235580
727 2644342678
728 2644365978
729 2644511454
730 2792463776
731 2819537978
732 2819648461
733 2843747873
734 2849560563
735 2849577070
736 2851153706
737 2857509083
738 2884964923
739 2898329619
740 2928535128

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00990

GGDEF

Diguanylate cyclase, GGDEF domain

322

476

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1mb3-assembly1.cif.gz_A crystal structure of the response regulator divk at ph 8.5 in complex with mg2+ 0.8996 150 267
3dgf-assembly1.cif.gz_C structure of a histidine kinase-response regulator complex reveals insights into two-component signaling and a novel cis-autophosphorylation mechanism 0.8965 150 267
1mav-assembly1.cif.gz_A crystal structure of the response regulator divk at ph 6.0 in complex with mn2+ 0.8941 150 267
3t6k-assembly2.cif.gz_B crystal structure of a putative response regulator (caur_3799) from chloroflexus aurantiacus j-10-fl at 1.86 a resolution 0.8914 149 268
1m5u-assembly1.cif.gz_A crystal structure of the response regulator divk. structure at ph 8.0 in the apo-form 0.8886 150 267
ID Description Score Start End Superfamily
1m5uA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8886 150 267 3.40.50.2300
1nxoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8818 151 268 3.40.50.2300
3t6kB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8799 149 268 3.40.50.2300
3c97A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8755 149 199 3.40.50.2300
3nhzB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8676 150 264 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A136LR22-F1-model_v4 Two component transcriptional regulator 0.897 150 270 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2V7YKE1-F1-model_v4 Response regulatory domain-containing protein 0.8828 150 271 GO:0000160
AF-A0A1G1JMU2-F1-model_v4 Response regulatory domain-containing protein 0.882 149 268 GO:0000160
AF-A0A0T6A182-F1-model_v4 Response regulator receiver protein 0.8812 149 268 GO:0000160
AF-A0A1F9DGY6-F1-model_v4 Response regulatory domain-containing protein 0.8785 149 270 GO:0000160

Map