F425443

General Info

Members Datasets Scaffolds Average Seq Length
370 224 321 366

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100000956|Ga0307408_1000009562
Length 395
Sequence VTAETAPDPATTLSTQDPSRHAVPARLDLRQDVALLTAAIMDIDSVSGNEKELADVVEAALLQIPQLTVVRDGDAIIARTELGHSERVILAGHLDTVPLPLAEDAKGTVPSSWESGIPGEGVLYGRGATDMKGGVAVQLALAATMFDGGAQPGRDVTFVFYDNEEVEAVKSGLGRLVRNHGELLHGDFAILLEPTDGTVEGGCNGTSRFEVATVGEAAHSARAWMGSNAIHAAAPILARLAAYEPQTITVDGLDYRESLNAVRINGGTAGNVIPDRCVVEINYRFAPDKTPDQAEAVVRGLLDGFNVVRTDAAAGARPGLQHPAAASFIAAVGGEPKPKYGWTDVARFSELGVPAVNFGPGDALLAHKDNEHVHADAIRKCLAALQDWLAGTNGR

Samples

Sample ID Description Type Environment
1 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
2 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
3 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
4 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
5 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
6 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
7 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
8 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
9 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
10 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
11 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
12 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
13 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
14 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
15 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
16 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
17 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
18 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
19 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
20 2858868258 Micromonospora sp. MH33 Isolate Unclassified
21 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
22 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
23 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
24 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
25 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
26 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
27 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
28 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
29 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
30 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
31 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
32 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
33 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
34 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
35 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
36 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
37 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
38 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
39 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
40 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
41 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
42 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
43 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
44 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
45 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
46 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
47 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
48 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
49 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
50 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
51 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
52 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
53 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
54 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
55 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
56 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
57 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
58 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
59 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
60 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
61 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
62 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
63 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
64 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
65 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
66 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
67 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
68 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
69 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
70 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
71 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
72 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
73 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
74 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
75 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
76 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
77 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
78 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
79 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
80 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
81 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
82 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
83 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
84 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
85 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
86 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
87 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
88 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
89 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
90 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
91 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
92 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
93 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
94 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
95 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
96 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
99 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
100 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
101 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
121 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
122 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
123 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
124 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
125 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
131 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
132 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
137 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
138 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
139 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
140 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
141 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
142 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
143 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
144 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
145 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
146 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
147 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
148 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
149 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
150 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
151 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
152 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
153 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
154 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
155 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
156 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
157 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
158 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
159 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
160 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
161 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
162 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
163 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
164 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
165 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
166 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
167 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
168 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
169 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
170 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
171 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
172 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
173 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
174 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
175 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
176 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
177 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
178 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
179 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
180 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
181 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
182 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
183 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
184 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
185 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
186 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
187 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
188 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
189 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
190 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
191 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
192 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
193 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
194 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
195 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
196 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
197 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
198 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
199 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
200 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
202 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
207 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
208 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
209 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
210 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
211 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
212 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
213 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
214 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
215 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
216 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
217 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
218 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
219 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
220 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
221 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
222 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
223 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
224 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.22
Metatranscriptomes 0.54
Isolates 13.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.62
Nodule 0.81
Rhizoplane 4.86
Rhizosphere 86.22
Stem 0
Stem Tuber 0
Unclassified 6.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1003911 3300002773 Bacteria 4890
2 rootH1_10109403 3300003316 Bacteria 1889
3 rootL2_10015721 3300003322 Bacteria 4352
4 Ga0006562J51391_1082184 3300003578 Bacteria 4585
5 Ga0065714_10008812 3300005288 Bacteria 3430
6 Ga0070676_10016671 3300005328 Bacteria 4061
7 Ga0070683_100290450 3300005329 Bacteria 1555
8 Ga0070677_10007135 3300005333 Bacteria 3725
9 Ga0068869_100024050 3300005334 Bacteria 4217
10 Ga0070666_10030397 3300005335 Bacteria 3558
11 Ga0070668_100039390 3300005347 Bacteria 3614
12 Ga0070668_100191773 3300005347 Bacteria 1674
13 Ga0070669_100002194 3300005353 Bacteria 14140
14 Ga0070675_100166866 3300005354 Bacteria 1897
15 Ga0070674_100036562 3300005356 Bacteria 3298
16 Ga0070673_100064332 3300005364 Bacteria 2922
17 Ga0070667_100174602 3300005367 Bacteria 1898
18 Ga0070678_100206581 3300005456 Bacteria 1624
19 Ga0068853_100264963 3300005539 Bacteria 1581
20 Ga0070672_100149817 3300005543 Bacteria 1929
21 Ga0070693_100145360 3300005547 Bacteria 1497
22 Ga0070702_100000931 3300005615 Bacteria 11456
23 Ga0068866_10017484 3300005718 Bacteria 3225
24 Ga0081455_10006930 3300005937 Bacteria 12051
25 Ga0081455_10013858 3300005937 Bacteria 7929
26 Ga0081455_10021780 3300005937 Bacteria 6004
27 Ga0081455_10085436 3300005937 Bacteria 2573
28 Ga0081455_10210876 3300005937 Bacteria 1447
29 Ga0081538_10001112 3300005981 Bacteria 28483
30 Ga0081539_10000085 3300005985 Bacteria 217816
31 Ga0081539_10006379 3300005985 Bacteria 11348
32 Ga0081539_10010027 3300005985 Bacteria 7794
33 Ga0081539_10014511 3300005985 Bacteria 5819
34 Ga0081539_10072886 3300005985 Bacteria 1834
35 Ga0075432_10000011 3300006058 Bacteria 35422
36 Ga0075432_10000400 3300006058 Bacteria 12664
37 Ga0075432_10007644 3300006058 Bacteria 3688
38 Ga0075428_100000117 3300006844 Bacteria 68053
39 Ga0075428_100000905 3300006844 Bacteria 31306
40 Ga0075428_100002261 3300006844 Bacteria 20852
41 Ga0075428_100024966 3300006844 Bacteria 6612
42 Ga0075428_100025264 3300006844 Bacteria 6574
43 Ga0075430_100001902 3300006846 Bacteria 17115
44 Ga0075430_100020116 3300006846 Bacteria 5680
45 Ga0075431_100001916 3300006847 Bacteria 19767
46 Ga0075431_100003122 3300006847 Bacteria 16021
47 Ga0075431_100015619 3300006847 Bacteria 7696
48 Ga0075431_100092802 3300006847 Bacteria 3116
49 Ga0075433_10000526 3300006852 Bacteria 25062
50 Ga0075433_10004480 3300006852 Bacteria 10883
51 Ga0075434_100000622 3300006871 Bacteria 27325
52 Ga0075434_100001913 3300006871 Bacteria 18047
53 Ga0075429_100017257 3300006880 Bacteria 6243
54 Ga0075429_100178770 3300006880 Bacteria 1860
55 Ga0075436_100008570 3300006914 Bacteria 6987
56 Ga0075436_100011988 3300006914 Bacteria 5946
57 Ga0075435_100018986 3300007076 Bacteria 5240
58 Ga0105244_10003829 3300009036 Bacteria 10609
59 Ga0105244_10007733 3300009036 Bacteria 6805
60 Ga0105244_10013996 3300009036 Bacteria 4657
61 Ga0105244_10081002 3300009036 Bacteria 1607
62 Ga0111539_10000029 3300009094 Bacteria 184798
63 Ga0111539_10003884 3300009094 Bacteria 19670
64 Ga0114129_10000001 3300009147 Bacteria 292978
65 Ga0114129_10005281 3300009147 Bacteria 18222
66 Ga0114129_10017169 3300009147 Bacteria 10308
67 Ga0105243_10005375 3300009148 Bacteria 9994
68 Ga0105243_10035608 3300009148 Bacteria 3860
69 Ga0105243_10361019 3300009148 Bacteria 1337
70 Ga0105242_10039527 3300009176 Bacteria 3798
71 Ga0105248_10023725 3300009177 Bacteria 6817
72 Ga0105237_10033413 3300009545 Bacteria 5211
73 Ga0105238_10345750 3300009551 Bacteria 1476
74 Ga0105249_10004668 3300009553 Bacteria 11830
75 Ga0105249_10326844 3300009553 Bacteria 1546
76 Ga0105239_10293981 3300010375 Bacteria 1829
77 Ga0105246_10005740 3300011119 Bacteria 7575
78 Ga0105246_10015294 3300011119 Bacteria 4843
79 Ga0105246_10021578 3300011119 Bacteria 4146
80 Ga0105246_10059623 3300011119 Bacteria 2648
81 Ga0157373_10003386 3300013100 Bacteria 12059
82 Ga0157371_10176858 3300013102 Bacteria 1526
83 Ga0157370_10016342 3300013104 Bacteria 7517
84 Ga0157369_10225179 3300013105 Bacteria 1962
85 Ga0157369_10334375 3300013105 Bacteria 1573
86 Ga0157378_10059704 3300013297 Bacteria 3403
87 Ga0163162_10080533 3300013306 Bacteria 3325
88 Ga0163162_10119519 3300013306 Bacteria 2738
89 Ga0157375_10057580 3300013308 Bacteria 3842
90 Ga0157375_10379942 3300013308 Bacteria 1579
91 Ga0157380_10049207 3300014326 Bacteria 3323
92 Ga0157380_10283117 3300014326 Bacteria 1518
93 Ga0163161_10185296 3300017792 Bacteria 1598
94 Ga0206353_11894164 3300020082 Bacteria 5619
95 Ga0209129_1000176 3300025258 Bacteria 93584
96 Ga0209025_1007705 3300025294 Bacteria 7943
97 Ga0209051_1028025 3300025303 Bacteria 2233
98 Ga0207682_10006436 3300025893 Bacteria 4733
99 Ga0207680_10009585 3300025903 Bacteria 4809
100 Ga0207645_10005221 3300025907 Bacteria 9469
101 Ga0207671_10204608 3300025914 Bacteria 1542
102 Ga0207681_10050046 3300025923 Bacteria 2826
103 Ga0207650_10033020 3300025925 Bacteria 3746
104 Ga0207687_10014216 3300025927 Bacteria 5207
105 Ga0207687_10130176 3300025927 Bacteria 1895
106 Ga0207706_10004364 3300025933 Bacteria 13293
107 Ga0207686_10043260 3300025934 Bacteria 2759
108 Ga0207686_10062242 3300025934 Bacteria 2369
109 Ga0207704_10009310 3300025938 Bacteria 4731
110 Ga0207691_10003245 3300025940 Bacteria 15843
111 Ga0207711_10018061 3300025941 Bacteria 5864
112 Ga0207661_10178126 3300025944 Bacteria 1855
113 Ga0207668_10111545 3300025972 Bacteria 2053
114 Ga0207648_10107817 3300026089 Bacteria 2445
115 Ga0207675_100024656 3300026118 Bacteria 5593
116 Ga0207683_10011464 3300026121 Bacteria 7565
117 Ga0207683_10051814 3300026121 Bacteria 3596
118 Ga0207683_10099123 3300026121 Bacteria 2600
119 Ga0207428_10000496 3300027907 Bacteria 47043
120 Ga0207428_10000730 3300027907 Bacteria 37917
121 Ga0307408_100000956 3300031548 Bacteria 22410
122 Ga0307408_100004219 3300031548 Bacteria 9793
123 Ga0307408_100017752 3300031548 Bacteria 4768
124 Ga0307408_100039663 3300031548 Bacteria 3331
125 Ga0307408_100050960 3300031548 Bacteria 2979
126 Ga0307408_100057603 3300031548 Bacteria 2822
127 Ga0307408_100073831 3300031548 Bacteria 2529
128 Ga0307408_100075094 3300031548 Bacteria 2510
129 Ga0307408_100082444 3300031548 Bacteria 2407
130 Ga0307408_100162820 3300031548 Bacteria 1773
131 Ga0307408_100163386 3300031548 Bacteria 1771
132 Ga0307408_100167921 3300031548 Bacteria 1749
133 Ga0307408_100309506 3300031548 Bacteria 1326
134 Ga0307405_10026712 3300031731 Bacteria 3335
135 Ga0307405_10031820 3300031731 Bacteria 3110
136 Ga0307405_10044043 3300031731 Bacteria 2727
137 Ga0307405_10049246 3300031731 Bacteria 2603
138 Ga0307405_10071077 3300031731 Bacteria 2238
139 Ga0307405_10080517 3300031731 Bacteria 2126
140 Ga0307405_10085136 3300031731 Bacteria 2077
141 Ga0307413_10003351 3300031824 Bacteria 6731
142 Ga0307413_10042257 3300031824 Bacteria 2677
143 Ga0307410_10001577 3300031852 Bacteria 10431
144 Ga0307410_10003407 3300031852 Bacteria 7974
145 Ga0307410_10003444 3300031852 Bacteria 7940
146 Ga0307410_10010137 3300031852 Bacteria 5325
147 Ga0307410_10018184 3300031852 Bacteria 4242
148 Ga0307410_10027753 3300031852 Bacteria 3580
149 Ga0307410_10053074 3300031852 Bacteria 2741
150 Ga0307410_10093302 3300031852 Bacteria 2142
151 Ga0307410_10107364 3300031852 Bacteria 2013
152 Ga0307406_10001364 3300031901 Bacteria 13659
153 Ga0307406_10041905 3300031901 Bacteria 2856
154 Ga0307406_10057745 3300031901 Bacteria 2490
155 Ga0307407_10001192 3300031903 Bacteria 9184
156 Ga0307407_10006790 3300031903 Bacteria 5126
157 Ga0307407_10028191 3300031903 Bacteria 2998
158 Ga0307407_10048623 3300031903 Bacteria 2415
159 Ga0307407_10115599 3300031903 Bacteria 1692
160 Ga0307407_10137849 3300031903 Bacteria 1570
161 Ga0307412_10005523 3300031911 Bacteria 7101
162 Ga0307412_10011850 3300031911 Bacteria 5062
163 Ga0307412_10021969 3300031911 Bacteria 3905
164 Ga0307412_10027638 3300031911 Bacteria 3540
165 Ga0307412_10049433 3300031911 Bacteria 2771
166 Ga0307409_100004123 3300031995 Bacteria 8087
167 Ga0307409_100043080 3300031995 Bacteria 3385
168 Ga0307409_100064856 3300031995 Bacteria 2871
169 Ga0307409_100096608 3300031995 Bacteria 2438
170 Ga0307409_100142779 3300031995 Bacteria 2065
171 Ga0307409_100164499 3300031995 Bacteria 1945
172 Ga0307409_100228938 3300031995 Bacteria 1683
173 Ga0307409_100370234 3300031995 Bacteria 1358
174 Ga0307409_100456174 3300031995 Bacteria 1235
175 Ga0307416_100000447 3300032002 Bacteria 21138
176 Ga0307416_100004591 3300032002 Bacteria 8353
177 Ga0307416_100017038 3300032002 Bacteria 5069
178 Ga0307416_100022252 3300032002 Bacteria 4571
179 Ga0307416_100049872 3300032002 Bacteria 3332
180 Ga0307416_100093982 3300032002 Bacteria 2584
181 Ga0307416_100273651 3300032002 Bacteria 1660
182 Ga0307416_100299898 3300032002 Bacteria 1596
183 Ga0307416_100457071 3300032002 Bacteria 1331
184 Ga0307414_10017649 3300032004 Bacteria 4372
185 Ga0307414_10039713 3300032004 Bacteria 3172
186 Ga0307414_10287101 3300032004 Bacteria 1385
187 Ga0307411_10006760 3300032005 Bacteria 5769
188 Ga0307415_100011463 3300032126 Bacteria 5075
189 Ga0307415_100074109 3300032126 Bacteria 2404
190 Ga0307415_100085425 3300032126 Bacteria 2267
191 Ga0373937_0089643 3300036401 Bacteria 2848
192 Ga0395899_0028771 3300037312 Bacteria 4181
193 Ga0395900_0006541 3300037418 Bacteria 12136
194 Ga0395900_0076086 3300037418 Bacteria 3450
195 Ga0395900_0087856 3300037418 Bacteria 3195
196 Ga0395898_0019863 3300037466 Bacteria 6833
197 Ga0395898_0118502 3300037466 Bacteria 2536
198 Ga0395901_0090356 3300038443 Bacteria 3205
199 Ga0439436_0004669 3300041404 Bacteria 4201
200 Ga0439436_0006380 3300041404 Bacteria 3622
201 Ga0439438_006518 3300041405 Bacteria 4106
202 Ga0439438_025023 3300041405 Bacteria 1630
203 Ga0439465_0005889 3300041413 Bacteria 3899
204 Ga0451791_0119109 3300041451 Bacteria 4660
205 Ga0439433_0000170 3300041999 Bacteria 10138
206 Ga0439433_0001374 3300041999 Bacteria 5009
207 Ga0439442_000104 3300042002 Bacteria 20823
208 Ga0439442_000337 3300042002 Bacteria 11144
209 Ga0439442_000396 3300042002 Bacteria 10208
210 Ga0439442_001502 3300042002 Bacteria 4601
211 Ga0439448_0006126 3300042005 Bacteria 3452
212 Ga0439432_001090 3300042006 Bacteria 10314
213 Ga0439449_0001599 3300042007 Bacteria 8879
214 Ga0439449_0004860 3300042007 Bacteria 5177
215 Ga0439457_000337 3300042014 Bacteria 12991
216 Ga0439462_0005212 3300042015 Bacteria 3197
217 Ga0439462_0005621 3300042015 Bacteria 3096
218 Ga0439463_006415 3300042016 Bacteria 2918
219 Ga0450920_000057 3300042122 Bacteria 14352
220 Ga0450920_002690 3300042122 Bacteria 3046
221 Ga0450907_000160 3300042146 Bacteria 25120
222 Ga0439446_0036769 3300042156 Bacteria 1432
223 Ga0450908_004107 3300042184 Bacteria 2813
224 Ga0439434_0000006 3300042435 Bacteria 56370
225 Ga0439434_0000525 3300042435 Bacteria 10958
226 Ga0439435_0022462 3300042436 Bacteria 1647
227 Ga0439464_0010848 3300042439 Bacteria 2408
228 Ga0450918_000367 3300042531 Bacteria 9888
229 Ga0450918_002794 3300042531 Bacteria 3276
230 Ga0439440_0025403 3300042993 Bacteria 1364
231 Ga0466965_0108089 3300044683 Bacteria 1427
232 Ga0466963_0160246 3300044694 Bacteria 1566
233 Ga0495638_0036342 3300046460 Bacteria 3139
234 Ga0495653_0023544 3300046463 Bacteria 4972
235 Ga0495580_0074902 3300046472 Bacteria 2362
236 Ga0495582_0038129 3300046473 Bacteria 2644
237 Ga0495639_0003953 3300046475 Bacteria 6366
238 Ga0495662_0014008 3300046476 Bacteria 3904
239 Ga0495630_0162873 3300046517 Bacteria 1698
240 Ga0495631_0045582 3300046518 Bacteria 1930
241 Ga0495644_0070858 3300046523 Bacteria 1310
242 Ga0495665_0002416 3300046531 Bacteria 10092
243 Ga0495665_0022261 3300046531 Bacteria 3407
244 Ga0495586_0001888 3300046535 Bacteria 11396
245 Ga0495586_0005506 3300046535 Bacteria 6769
246 Ga0495587_0014384 3300046536 Bacteria 4965
247 Ga0495645_0008027 3300046543 Bacteria 7350
248 Ga0495645_0183301 3300046543 Bacteria 1432
249 Ga0495667_0001640 3300046559 Bacteria 14816
250 Ga0495656_0003773 3300046615 Bacteria 5148
251 Ga0495656_0124433 3300046615 Bacteria 1221
252 Ga0495659_0005449 3300046664 Bacteria 4003
253 Ga0495588_0003990 3300046674 Bacteria 6484
254 Ga0495588_0010789 3300046674 Bacteria 4264
255 Ga0495588_0013370 3300046674 Bacteria 3910
256 Ga0495657_0151575 3300046675 Bacteria 1439
257 Ga0495670_0003360 3300046691 Bacteria 7873
258 Ga0495670_0093800 3300046691 Bacteria 1538
259 Ga0495600_0004115 3300046809 Bacteria 8654
260 Ga0495660_0086538 3300046810 Bacteria 1636
261 Ga0495581_0008283 3300047315 Bacteria 6027
262 Ga0495581_0014258 3300047315 Bacteria 4609
263 Ga0495636_0013500 3300047318 Bacteria 3243
264 Ga0495675_0011570 3300047444 Bacteria 5538
265 Ga0495677_0054153 3300047445 Bacteria 1480
266 Ga0495593_0030168 3300047673 Bacteria 2968
267 Ga0495626_0086804 3300048091 Bacteria 1382
268 Ga0496100_0035387 3300048903 Bacteria 3140
269 Ga0496102_0066108 3300048905 Bacteria 3314
270 Ga0496103_0052955 3300048906 Bacteria 2514
271 Ga0496105_0084015 3300048908 Bacteria 2629
272 Ga0496105_0095643 3300048908 Bacteria 2453
273 Ga0496107_0110992 3300048910 Bacteria 2015
274 Ga0496107_0225250 3300048910 Bacteria 1395
275 Ga0496108_0074580 3300048911 Bacteria 2865
276 Ga0496109_0078223 3300048912 Bacteria 3045
277 Ga0496110_0134758 3300048913 Bacteria 2231
278 Ga0496111_0035216 3300048914 Bacteria 3576
279 Ga0496111_0078241 3300048914 Bacteria 2411
280 Ga0496111_0255482 3300048914 Bacteria 1300
281 Ga0496112_0340100 3300048915 Bacteria 1444
282 Ga0496112_0363810 3300048915 Bacteria 1388
283 Ga0496114_0131547 3300048917 Bacteria 2161
284 Ga0496114_0183762 3300048917 Bacteria 1826
285 Ga0496124_0033255 3300048927 Bacteria 4537
286 Ga0496126_0284882 3300048929 Bacteria 1368
287 Ga0501032_0000135 3300049569 Bacteria 60174
288 Ga0501032_0008696 3300049569 Bacteria 7395
289 Ga0501032_0056554 3300049569 Bacteria 2637
290 Ga0501033_0161515 3300049570 Bacteria 1613
291 Ga0501034_0000079 3300049571 Bacteria 171105
292 Ga0501037_0025464 3300049573 Bacteria 4371
293 Ga0501038_0023976 3300049574 Bacteria 5449
294 Ga0501039_0024078 3300049575 Bacteria 4675
295 Ga0501043_0048600 3300049579 Bacteria 3335
296 Ga0501047_0147937 3300049581 Bacteria 2225
297 Ga0501202_012396 3300049652 Bacteria 1608
298 Ga0501044_0090194 3300049823 Bacteria 3093
299 nmdc:mga00v17_87772_c1 3300050491 Bacteria 1949
300 nmdc:mga05p37_1399_c1 3300050507 Bacteria 28060
301 nmdc:mga05p37_312386_c1 3300050507 Bacteria 1862
302 nmdc:mga05p37_37259_c1 3300050507 Bacteria 5963
303 nmdc:mga05p37_7034_c1 3300050507 Bacteria 13262
304 nmdc:mga09592_169_c1 3300050508 Bacteria 46080
305 nmdc:mga09592_3125_c1 3300050508 Bacteria 13445
306 nmdc:mga09592_70021_c1 3300050508 Bacteria 2976
307 nmdc:mga0qj67_196_c1 3300050509 Bacteria 40956
308 nmdc:mga06r32_119669_c1 3300050510 Bacteria 2596
309 nmdc:mga06r32_140359_c1 3300050510 Bacteria 2392
310 nmdc:mga06r32_197_c1 3300050510 Bacteria 48402
311 nmdc:mga06r32_66605_c1 3300050510 Bacteria 3476
312 nmdc:mga06r32_8998_c1 3300050510 Bacteria 8997
313 nmdc:mga08y16_18035_c1 3300050511 Bacteria 7435
314 nmdc:mga08y16_83419_c1 3300050511 Bacteria 3331
315 nmdc:mga0n895_1015_c1 3300050512 Bacteria 20402
316 nmdc:mga0n895_9303_c1 3300050512 Bacteria 8585
317 nmdc:mga08x19_10840_c1 3300050514 Bacteria 5481
318 nmdc:mga08x19_9154_c1 3300050514 Bacteria 5913
319 nmdc:mga0a205_4349_c1 3300050515 Bacteria 12701
320 nmdc:mga0a205_474_c1 3300050515 Bacteria 31330
321 Ga0500616_0006885 3300053153 Bacteria 7334

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014326 Ga0157380_10283117 Ga0157380_102831171 309
2 3300048915 Ga0496112_0340100 Ga0496112_0340100_14_1018 323
3 3300046460 Ga0495638_0036342 Ga0495638_0036342_1512_2609 327
4 3300053153 Ga0500616_0006885 Ga0500616_0006885_692_1789 327
5 3300006844 Ga0075428_100000117 Ga0075428_10000011738 328
6 3300006847 Ga0075431_100003122 Ga0075431_1000031229 328
7 3300006880 Ga0075429_100017257 Ga0075429_1000172572 328
8 3300009147 Ga0114129_10000001 Ga0114129_10000001103 328
9 3300050507 nmdc:mga05p37_1399_c1 nmdc:mga05p37_1399_c1_892_1977 328
10 3300050508 nmdc:mga09592_169_c1 nmdc:mga09592_169_c1_31105_32190 328
11 3300050509 nmdc:mga0qj67_196_c1 nmdc:mga0qj67_196_c1_13891_14976 328
12 3300050510 nmdc:mga06r32_197_c1 nmdc:mga06r32_197_c1_33479_34564 328
13 3300041404 Ga0439436_0004669 Ga0439436_0004669_2914_4038 333
14 3300041405 Ga0439438_006518 Ga0439438_006518_1097_2221 333
15 3300041999 Ga0439433_0000170 Ga0439433_0000170_5192_6316 333
16 3300042006 Ga0439432_001090 Ga0439432_001090_3742_4866 333
17 3300042007 Ga0439449_0004860 Ga0439449_0004860_2607_3731 333
18 3300042014 Ga0439457_000337 Ga0439457_000337_963_2087 333
19 3300042122 Ga0450920_002690 Ga0450920_002690_1392_2516 333
20 3300042184 Ga0450908_004107 Ga0450908_004107_591_1715 333
21 3300042435 Ga0439434_0000525 Ga0439434_0000525_9304_10428 333
22 3300042531 Ga0450918_002794 Ga0450918_002794_1611_2735 333
23 3300005985 Ga0081539_10072886 Ga0081539_100728862 334
24 3300009036 Ga0105244_10003829 Ga0105244_100038291 334
25 3300011119 Ga0105246_10015294 Ga0105246_100152942 334
26 3300006844 Ga0075428_100024966 Ga0075428_1000249667 335
27 3300006846 Ga0075430_100020116 Ga0075430_1000201165 335
28 3300006847 Ga0075431_100015619 Ga0075431_1000156196 335
29 3300009147 Ga0114129_10017169 Ga0114129_100171698 335
30 3300050507 nmdc:mga05p37_37259_c1 nmdc:mga05p37_37259_c1_2131_3198 335
31 3300050508 nmdc:mga09592_3125_c1 nmdc:mga09592_3125_c1_560_1627 335
32 3300050510 nmdc:mga06r32_66605_c1 nmdc:mga06r32_66605_c1_2312_3379 335
33 iso_pu_bacteria 2675903059 2676481320 335
34 3300005329 Ga0070683_100290450 Ga0070683_1002904501 336
35 3300005615 Ga0070702_100000931 Ga0070702_1000009317 336
36 3300006844 Ga0075428_100000905 Ga0075428_10000090525 336
37 3300006846 Ga0075430_100001902 Ga0075430_10000190213 336
38 3300006847 Ga0075431_100001916 Ga0075431_10000191612 336
39 3300009148 Ga0105243_10005375 Ga0105243_100053754 336
40 3300009176 Ga0105242_10039527 Ga0105242_100395273 336
41 3300009545 Ga0105237_10033413 Ga0105237_100334135 336
42 3300013297 Ga0157378_10059704 Ga0157378_100597044 336
43 3300013308 Ga0157375_10057580 Ga0157375_100575804 336
44 3300020082 Ga0206353_11894164 Ga0206353_118941643 336
45 3300025914 Ga0207671_10204608 Ga0207671_102046081 336
46 3300025934 Ga0207686_10062242 Ga0207686_100622421 336
47 3300025944 Ga0207661_10178126 Ga0207661_101781262 336
48 3300026121 Ga0207683_10051814 Ga0207683_100518142 336
49 3300031548 Ga0307408_100039663 Ga0307408_1000396633 336
50 3300036401 Ga0373937_0089643 Ga0373937_0089643_705_1775 336
51 3300044694 Ga0466963_0160246 Ga0466963_0160246_257_1327 336
52 3300048910 Ga0496107_0225250 Ga0496107_0225250_90_1154 336
53 3300049581 Ga0501047_0147937 Ga0501047_0147937_242_1294 336
54 3300050491 nmdc:mga00v17_87772_c1 nmdc:mga00v17_87772_c1_466_1539 336
55 3300050510 nmdc:mga06r32_119669_c1 nmdc:mga06r32_119669_c1_332_1402 336
56 3300050510 nmdc:mga06r32_8998_c1 nmdc:mga06r32_8998_c1_6832_7902 336
57 iso_pu_bacteria 2772190715 2772645820 336
58 iso_pu_bacteria 2855670206 2855670506 336
59 iso_pu_bacteria 2858868258 2858868681 336
60 iso_pu_bacteria 2996221748 2996223913 336
61 iso_pu_bacteria 8054727385 8054734472 336
62 iso_pu_bacteria 8054734606 8054738872 336
63 3300031548 Ga0307408_100163386 Ga0307408_1001633862 337
64 3300031903 Ga0307407_10115599 Ga0307407_101155992 337
65 3300003578 Ga0006562J51391_1082184 Ga0006562J51391_10821842 338
66 iso_pu_bacteria 2773857762 2774393915 338
67 iso_pu_bacteria 2808606439 2809195212 338
68 iso_pu_bacteria 2811994878 2812350087 338
69 iso_pu_bacteria 2891968417 2891972289 338
70 3300005334 Ga0068869_100024050 Ga0068869_1000240502 339
71 3300005985 Ga0081539_10000085 Ga0081539_1000008577 339
72 3300005985 Ga0081539_10006379 Ga0081539_1000637910 339
73 3300005985 Ga0081539_10014511 Ga0081539_100145114 339
74 3300025927 Ga0207687_10130176 Ga0207687_101301761 339
75 3300026121 Ga0207683_10099123 Ga0207683_100991233 339
76 3300032002 Ga0307416_100049872 Ga0307416_1000498722 339
77 3300041451 Ga0451791_0119109 Ga0451791_0119109_1499_2590 339
78 3300046473 Ga0495582_0038129 Ga0495582_0038129_1385_2482 339
79 3300046475 Ga0495639_0003953 Ga0495639_0003953_3665_4762 339
80 3300046476 Ga0495662_0014008 Ga0495662_0014008_136_1290 339
81 3300046517 Ga0495630_0162873 Ga0495630_0162873_389_1543 339
82 3300046531 Ga0495665_0002416 Ga0495665_0002416_3606_4760 339
83 3300046531 Ga0495665_0022261 Ga0495665_0022261_937_2034 339
84 3300046535 Ga0495586_0001888 Ga0495586_0001888_3775_4872 339
85 3300046535 Ga0495586_0005506 Ga0495586_0005506_1182_2336 339
86 3300046536 Ga0495587_0014384 Ga0495587_0014384_2565_3719 339
87 3300046543 Ga0495645_0008027 Ga0495645_0008027_2565_3719 339
88 3300046559 Ga0495667_0001640 Ga0495667_0001640_568_1722 339
89 3300046674 Ga0495588_0003990 Ga0495588_0003990_1620_2717 339
90 3300046675 Ga0495657_0151575 Ga0495657_0151575_248_1402 339
91 3300046809 Ga0495600_0004115 Ga0495600_0004115_2836_3990 339
92 3300047315 Ga0495581_0008283 Ga0495581_0008283_3647_4801 339
93 3300047444 Ga0495675_0011570 Ga0495675_0011570_173_1327 339
94 3300047673 Ga0495593_0030168 Ga0495593_0030168_1720_2817 339
95 3300048911 Ga0496108_0074580 Ga0496108_0074580_404_1477 339
96 3300048912 Ga0496109_0078223 Ga0496109_0078223_1271_2344 339
97 3300048914 Ga0496111_0255482 Ga0496111_0255482_12_1085 339
98 3300048917 Ga0496114_0131547 Ga0496114_0131547_154_1257 339
99 iso_pu_bacteria 2844849076 2844851277 339
100 3300005347 Ga0070668_100039390 Ga0070668_1000393904 340
101 3300005356 Ga0070674_100036562 Ga0070674_1000365624 340
102 3300005539 Ga0068853_100264963 Ga0068853_1002649632 340
103 3300005547 Ga0070693_100145360 Ga0070693_1001453602 340
104 3300005718 Ga0068866_10017484 Ga0068866_100174842 340
105 3300005937 Ga0081455_10006930 Ga0081455_1000693010 340
106 3300005937 Ga0081455_10013858 Ga0081455_100138585 340
107 3300005937 Ga0081455_10021780 Ga0081455_100217805 340
108 3300005937 Ga0081455_10085436 Ga0081455_100854362 340
109 3300005937 Ga0081455_10210876 Ga0081455_102108762 340
110 3300005981 Ga0081538_10001112 Ga0081538_1000111211 340
111 3300005985 Ga0081539_10010027 Ga0081539_100100278 340
112 3300006058 Ga0075432_10000011 Ga0075432_100000117 340
113 3300006058 Ga0075432_10000400 Ga0075432_1000040012 340
114 3300006844 Ga0075428_100002261 Ga0075428_10000226124 340
115 3300006844 Ga0075428_100025264 Ga0075428_1000252649 340
116 3300006847 Ga0075431_100092802 Ga0075431_1000928023 340
117 3300006852 Ga0075433_10000526 Ga0075433_100005267 340
118 3300006852 Ga0075433_10004480 Ga0075433_1000448011 340
119 3300006871 Ga0075434_100000622 Ga0075434_10000062221 340
120 3300006871 Ga0075434_100001913 Ga0075434_10000191312 340
121 3300006880 Ga0075429_100178770 Ga0075429_1001787702 340
122 3300006914 Ga0075436_100008570 Ga0075436_1000085706 340
123 3300006914 Ga0075436_100011988 Ga0075436_1000119882 340
124 3300007076 Ga0075435_100018986 Ga0075435_1000189865 340
125 3300009094 Ga0111539_10000029 Ga0111539_1000002937 340
126 3300009094 Ga0111539_10003884 Ga0111539_1000388415 340
127 3300009147 Ga0114129_10005281 Ga0114129_1000528110 340
128 3300009148 Ga0105243_10035608 Ga0105243_100356085 340
129 3300009551 Ga0105238_10345750 Ga0105238_103457502 340
130 3300009553 Ga0105249_10004668 Ga0105249_100046687 340
131 3300009553 Ga0105249_10326844 Ga0105249_103268442 340
132 3300010375 Ga0105239_10293981 Ga0105239_102939812 340
133 3300013102 Ga0157371_10176858 Ga0157371_101768581 340
134 3300013306 Ga0163162_10080533 Ga0163162_100805335 340
135 3300014326 Ga0157380_10049207 Ga0157380_100492073 340
136 3300025927 Ga0207687_10014216 Ga0207687_100142162 340
137 3300025933 Ga0207706_10004364 Ga0207706_1000436412 340
138 3300025934 Ga0207686_10043260 Ga0207686_100432602 340
139 3300025938 Ga0207704_10009310 Ga0207704_100093104 340
140 3300025972 Ga0207668_10111545 Ga0207668_101115452 340
141 3300026089 Ga0207648_10107817 Ga0207648_101078172 340
142 3300026118 Ga0207675_100024656 Ga0207675_1000246564 340
143 3300027907 Ga0207428_10000496 Ga0207428_1000049643 340
144 3300027907 Ga0207428_10000730 Ga0207428_1000073036 340
145 3300031548 Ga0307408_100050960 Ga0307408_1000509603 340
146 3300031731 Ga0307405_10031820 Ga0307405_100318204 340
147 3300031731 Ga0307405_10049246 Ga0307405_100492462 340
148 3300031852 Ga0307410_10018184 Ga0307410_100181843 340
149 3300031852 Ga0307410_10053074 Ga0307410_100530743 340
150 3300031901 Ga0307406_10057745 Ga0307406_100577452 340
151 3300031903 Ga0307407_10006790 Ga0307407_100067905 340
152 3300031903 Ga0307407_10028191 Ga0307407_100281913 340
153 3300031903 Ga0307407_10137849 Ga0307407_101378492 340
154 3300031911 Ga0307412_10049433 Ga0307412_100494333 340
155 3300031995 Ga0307409_100096608 Ga0307409_1000966082 340
156 3300031995 Ga0307409_100228938 Ga0307409_1002289382 340
157 3300032002 Ga0307416_100017038 Ga0307416_1000170382 340
158 3300032002 Ga0307416_100299898 Ga0307416_1002998982 340
159 3300032004 Ga0307414_10017649 Ga0307414_100176492 340
160 3300032004 Ga0307414_10287101 Ga0307414_102871012 340
161 3300032126 Ga0307415_100074109 Ga0307415_1000741092 340
162 3300042005 Ga0439448_0006126 Ga0439448_0006126_320_1396 340
163 3300042016 Ga0439463_006415 Ga0439463_006415_450_1526 340
164 3300042436 Ga0439435_0022462 Ga0439435_0022462_368_1453 340
165 3300042439 Ga0439464_0010848 Ga0439464_0010848_361_1437 340
166 3300042993 Ga0439440_0025403 Ga0439440_0025403_20_1105 340
167 3300046523 Ga0495644_0070858 Ga0495644_0070858_75_1139 340
168 3300046615 Ga0495656_0124433 Ga0495656_0124433_68_1153 340
169 3300046810 Ga0495660_0086538 Ga0495660_0086538_480_1544 340
170 3300048091 Ga0495626_0086804 Ga0495626_0086804_334_1359 340
171 3300049652 Ga0501202_012396 Ga0501202_012396_349_1434 340
172 3300050507 nmdc:mga05p37_312386_c1 nmdc:mga05p37_312386_c1_586_1671 340
173 3300050507 nmdc:mga05p37_7034_c1 nmdc:mga05p37_7034_c1_8576_9661 340
174 3300050508 nmdc:mga09592_70021_c1 nmdc:mga09592_70021_c1_405_1490 340
175 3300050510 nmdc:mga06r32_140359_c1 nmdc:mga06r32_140359_c1_1149_2234 340
176 3300050511 nmdc:mga08y16_18035_c1 nmdc:mga08y16_18035_c1_2121_3206 340
177 3300050511 nmdc:mga08y16_83419_c1 nmdc:mga08y16_83419_c1_74_1117 340
178 3300050512 nmdc:mga0n895_1015_c1 nmdc:mga0n895_1015_c1_12312_13397 340
179 3300050512 nmdc:mga0n895_9303_c1 nmdc:mga0n895_9303_c1_3119_4162 340
180 3300050514 nmdc:mga08x19_10840_c1 nmdc:mga08x19_10840_c1_2383_3459 340
181 3300050514 nmdc:mga08x19_9154_c1 nmdc:mga08x19_9154_c1_197_1282 340
182 3300050515 nmdc:mga0a205_4349_c1 nmdc:mga0a205_4349_c1_2269_3354 340
183 3300050515 nmdc:mga0a205_474_c1 nmdc:mga0a205_474_c1_10682_11725 340
184 3300013104 Ga0157370_10016342 Ga0157370_100163424 341
185 3300031548 Ga0307408_100017752 Ga0307408_1000177522 341
186 3300031548 Ga0307408_100073831 Ga0307408_1000738312 341
187 3300031824 Ga0307413_10003351 Ga0307413_100033513 341
188 3300031852 Ga0307410_10001577 Ga0307410_100015774 341
189 3300031901 Ga0307406_10001364 Ga0307406_1000136412 341
190 3300031903 Ga0307407_10001192 Ga0307407_100011928 341
191 3300031995 Ga0307409_100004123 Ga0307409_1000041233 341
192 3300032002 Ga0307416_100000447 Ga0307416_10000044723 341
193 3300032126 Ga0307415_100011463 Ga0307415_1000114634 341
194 3300044683 Ga0466965_0108089 Ga0466965_0108089_55_1137 341
195 3300046463 Ga0495653_0023544 Ga0495653_0023544_908_1987 341
196 iso_pu_bacteria 2537561592 2537900308 341
197 iso_pu_bacteria 2554235227 2555228656 341
198 iso_pu_bacteria 2808606700 2810364280 341
199 iso_pu_bacteria 2905926851 2905927815 341
200 iso_pu_bacteria 2946003308 2946005432 341
201 iso_pu_bacteria 8004021418 8004023138 341
202 iso_pu_bacteria 8004025490 8004028962 341
203 3300031548 Ga0307408_100082444 Ga0307408_1000824442 342
204 3300031995 Ga0307409_100164499 Ga0307409_1001644992 342
205 3300047315 Ga0495581_0014258 Ga0495581_0014258_390_1493 342
206 3300031903 Ga0307407_10048623 Ga0307407_100486232 344
207 3300031995 Ga0307409_100142779 Ga0307409_1001427792 344
208 3300032002 Ga0307416_100093982 Ga0307416_1000939822 344
209 3300003316 rootH1_10109403 rootH1_101094032 350
210 3300003322 rootL2_10015721 rootL2_100157215 350
211 3300031548 Ga0307408_100004219 Ga0307408_1000042192 350
212 3300031548 Ga0307408_100075094 Ga0307408_1000750942 350
213 3300031731 Ga0307405_10026712 Ga0307405_100267122 350
214 3300031731 Ga0307405_10044043 Ga0307405_100440432 350
215 3300031824 Ga0307413_10042257 Ga0307413_100422573 350
216 3300031852 Ga0307410_10027753 Ga0307410_100277533 350
217 3300031852 Ga0307410_10093302 Ga0307410_100933021 350
218 3300031911 Ga0307412_10027638 Ga0307412_100276383 350
219 3300031995 Ga0307409_100043080 Ga0307409_1000430803 350
220 3300031995 Ga0307409_100370234 Ga0307409_1003702341 350
221 3300032002 Ga0307416_100004591 Ga0307416_1000045916 350
222 3300032126 Ga0307415_100085425 Ga0307415_1000854252 350
223 3300037418 Ga0395900_0006541 Ga0395900_0006541_9224_10348 350
224 3300041404 Ga0439436_0006380 Ga0439436_0006380_1177_2310 350
225 3300041405 Ga0439438_025023 Ga0439438_025023_163_1290 350
226 3300041413 Ga0439465_0005889 Ga0439465_0005889_1138_2265 350
227 3300041999 Ga0439433_0001374 Ga0439433_0001374_2448_3575 350
228 3300042002 Ga0439442_000396 Ga0439442_000396_8815_9909 350
229 3300042002 Ga0439442_001502 Ga0439442_001502_1659_2786 350
230 3300042007 Ga0439449_0001599 Ga0439449_0001599_3848_4975 350
231 3300042015 Ga0439462_0005212 Ga0439462_0005212_201_1328 350
232 3300042015 Ga0439462_0005621 Ga0439462_0005621_1142_2275 350
233 3300048905 Ga0496102_0066108 Ga0496102_0066108_909_2033 350
234 3300049569 Ga0501032_0056554 Ga0501032_0056554_433_1557 350
235 3300049574 Ga0501038_0023976 Ga0501038_0023976_426_1550 350
236 3300049579 Ga0501043_0048600 Ga0501043_0048600_1667_2791 350
237 iso_pu_bacteria 2919034639 2919036275 350
238 iso_pu_bacteria 2919391150 2919391533 350
239 iso_pu_bacteria 2945956166 2945959929 350
240 iso_pu_bacteria 2946024296 2946026506 350
241 iso_pu_bacteria 8054107350 8054110953 350
242 3300002773 JGI25152J39213_1003911 JGI25152J39213_10039116 351
243 3300005288 Ga0065714_10008812 Ga0065714_100088122 351
244 3300005328 Ga0070676_10016671 Ga0070676_100166713 351
245 3300005333 Ga0070677_10007135 Ga0070677_100071352 351
246 3300005335 Ga0070666_10030397 Ga0070666_100303974 351
247 3300005347 Ga0070668_100191773 Ga0070668_1001917732 351
248 3300005353 Ga0070669_100002194 Ga0070669_10000219411 351
249 3300005354 Ga0070675_100166866 Ga0070675_1001668662 351
250 3300005364 Ga0070673_100064332 Ga0070673_1000643323 351
251 3300005367 Ga0070667_100174602 Ga0070667_1001746021 351
252 3300005456 Ga0070678_100206581 Ga0070678_1002065811 351
253 3300005543 Ga0070672_100149817 Ga0070672_1001498172 351
254 3300006058 Ga0075432_10007644 Ga0075432_100076443 351
255 3300009036 Ga0105244_10007733 Ga0105244_100077338 351
256 3300009036 Ga0105244_10013996 Ga0105244_100139965 351
257 3300009036 Ga0105244_10081002 Ga0105244_100810022 351
258 3300009148 Ga0105243_10361019 Ga0105243_103610191 351
259 3300009177 Ga0105248_10023725 Ga0105248_100237253 351
260 3300011119 Ga0105246_10005740 Ga0105246_100057405 351
261 3300011119 Ga0105246_10021578 Ga0105246_100215784 351
262 3300011119 Ga0105246_10059623 Ga0105246_100596231 351
263 3300013100 Ga0157373_10003386 Ga0157373_100033867 351
264 3300013105 Ga0157369_10225179 Ga0157369_102251792 351
265 3300013105 Ga0157369_10334375 Ga0157369_103343752 351
266 3300013306 Ga0163162_10119519 Ga0163162_101195193 351
267 3300013308 Ga0157375_10379942 Ga0157375_103799421 351
268 3300017792 Ga0163161_10185296 Ga0163161_101852962 351
269 3300025258 Ga0209129_1000176 Ga0209129_100017683 351
270 3300025294 Ga0209025_1007705 Ga0209025_10077056 351
271 3300025303 Ga0209051_1028025 Ga0209051_10280252 351
272 3300025893 Ga0207682_10006436 Ga0207682_100064365 351
273 3300025903 Ga0207680_10009585 Ga0207680_100095854 351
274 3300025907 Ga0207645_10005221 Ga0207645_100052211 351
275 3300025923 Ga0207681_10050046 Ga0207681_100500462 351
276 3300025925 Ga0207650_10033020 Ga0207650_100330204 351
277 3300025940 Ga0207691_10003245 Ga0207691_1000324517 351
278 3300025941 Ga0207711_10018061 Ga0207711_100180615 351
279 3300026121 Ga0207683_10011464 Ga0207683_100114648 351
280 3300031548 Ga0307408_100000956 Ga0307408_1000009562 351
281 3300031548 Ga0307408_100057603 Ga0307408_1000576033 351
282 3300031548 Ga0307408_100162820 Ga0307408_1001628202 351
283 3300031548 Ga0307408_100167921 Ga0307408_1001679211 351
284 3300031548 Ga0307408_100309506 Ga0307408_1003095061 351
285 3300031731 Ga0307405_10071077 Ga0307405_100710772 351
286 3300031731 Ga0307405_10080517 Ga0307405_100805172 351
287 3300031731 Ga0307405_10085136 Ga0307405_100851361 351
288 3300031852 Ga0307410_10003407 Ga0307410_100034073 351
289 3300031852 Ga0307410_10003444 Ga0307410_100034442 351
290 3300031852 Ga0307410_10010137 Ga0307410_100101374 351
291 3300031852 Ga0307410_10107364 Ga0307410_101073642 351
292 3300031901 Ga0307406_10041905 Ga0307406_100419053 351
293 3300031911 Ga0307412_10005523 Ga0307412_100055238 351
294 3300031911 Ga0307412_10011850 Ga0307412_100118501 351
295 3300031911 Ga0307412_10021969 Ga0307412_100219694 351
296 3300031995 Ga0307409_100064856 Ga0307409_1000648562 351
297 3300031995 Ga0307409_100456174 Ga0307409_1004561741 351
298 3300032002 Ga0307416_100022252 Ga0307416_1000222522 351
299 3300032002 Ga0307416_100273651 Ga0307416_1002736512 351
300 3300032002 Ga0307416_100457071 Ga0307416_1004570711 351
301 3300032004 Ga0307414_10039713 Ga0307414_100397131 351
302 3300032005 Ga0307411_10006760 Ga0307411_100067603 351
303 3300037312 Ga0395899_0028771 Ga0395899_0028771_1924_3060 351
304 3300037418 Ga0395900_0076086 Ga0395900_0076086_1488_2579 351
305 3300037418 Ga0395900_0087856 Ga0395900_0087856_1973_3109 351
306 3300037466 Ga0395898_0019863 Ga0395898_0019863_1848_2984 351
307 3300037466 Ga0395898_0118502 Ga0395898_0118502_364_1455 351
308 3300038443 Ga0395901_0090356 Ga0395901_0090356_1843_2979 351
309 3300042002 Ga0439442_000104 Ga0439442_000104_15274_16410 351
310 3300042002 Ga0439442_000337 Ga0439442_000337_4494_5657 351
311 3300042122 Ga0450920_000057 Ga0450920_000057_3344_4480 351
312 3300042146 Ga0450907_000160 Ga0450907_000160_8489_9625 351
313 3300042156 Ga0439446_0036769 Ga0439446_0036769_266_1402 351
314 3300042435 Ga0439434_0000006 Ga0439434_0000006_52899_54035 351
315 3300042531 Ga0450918_000367 Ga0450918_000367_7147_8283 351
316 3300046472 Ga0495580_0074902 Ga0495580_0074902_87_1211 351
317 3300046518 Ga0495631_0045582 Ga0495631_0045582_677_1774 351
318 3300046543 Ga0495645_0183301 Ga0495645_0183301_291_1346 351
319 3300046615 Ga0495656_0003773 Ga0495656_0003773_3751_4848 351
320 3300046664 Ga0495659_0005449 Ga0495659_0005449_1284_2381 351
321 3300046674 Ga0495588_0010789 Ga0495588_0010789_2240_3406 351
322 3300046674 Ga0495588_0013370 Ga0495588_0013370_1306_2403 351
323 3300046691 Ga0495670_0003360 Ga0495670_0003360_5107_6204 351
324 3300046691 Ga0495670_0093800 Ga0495670_0093800_57_1154 351
325 3300047318 Ga0495636_0013500 Ga0495636_0013500_1175_2272 351
326 3300047445 Ga0495677_0054153 Ga0495677_0054153_97_1263 351
327 3300048903 Ga0496100_0035387 Ga0496100_0035387_150_1247 351
328 3300048906 Ga0496103_0052955 Ga0496103_0052955_533_1630 351
329 3300048908 Ga0496105_0084015 Ga0496105_0084015_369_1535 351
330 3300048908 Ga0496105_0095643 Ga0496105_0095643_590_1687 351
331 3300048910 Ga0496107_0110992 Ga0496107_0110992_843_1940 351
332 3300048913 Ga0496110_0134758 Ga0496110_0134758_250_1347 351
333 3300048914 Ga0496111_0035216 Ga0496111_0035216_440_1537 351
334 3300048914 Ga0496111_0078241 Ga0496111_0078241_309_1406 351
335 3300048915 Ga0496112_0363810 Ga0496112_0363810_49_1215 351
336 3300048917 Ga0496114_0183762 Ga0496114_0183762_256_1422 351
337 3300048927 Ga0496124_0033255 Ga0496124_0033255_1682_2848 351
338 3300048929 Ga0496126_0284882 Ga0496126_0284882_85_1251 351
339 3300049569 Ga0501032_0000135 Ga0501032_0000135_4542_5666 351
340 3300049569 Ga0501032_0008696 Ga0501032_0008696_111_1247 351
341 3300049570 Ga0501033_0161515 Ga0501033_0161515_251_1387 351
342 3300049571 Ga0501034_0000079 Ga0501034_0000079_52_1176 351
343 3300049573 Ga0501037_0025464 Ga0501037_0025464_144_1241 351
344 3300049575 Ga0501039_0024078 Ga0501039_0024078_11_1147 351
345 3300049823 Ga0501044_0090194 Ga0501044_0090194_1308_2444 351
346 iso_pu_bacteria 2690315906 2691514669 351
347 iso_pu_bacteria 2775506735 2775654993 351
348 iso_pu_bacteria 2808606357 2808827782 351
349 iso_pu_bacteria 2808606360 2808853136 351
350 iso_pu_bacteria 2808606366 2808878362 351
351 iso_pu_bacteria 2808606370 2808892030 351
352 iso_pu_bacteria 2808606371 2808897119 351
353 iso_pu_bacteria 2811994871 2812320455 351
354 iso_pu_bacteria 2844849076 2844849633 351
355 iso_pu_bacteria 2857740372 2857741242 351
356 iso_pu_bacteria 2904497146 2904499715 351
357 iso_pu_bacteria 2904776348 2904776727 351
358 iso_pu_bacteria 2919059106 2919061612 351
359 iso_pu_bacteria 2919538618 2919542251 351
360 iso_pu_bacteria 2932426870 2932429319 351
361 iso_pu_bacteria 2933418574 2933420801 351
362 iso_pu_bacteria 2939598168 2939598756 351
363 iso_pu_bacteria 2939647034 2939648779 351
364 iso_pu_bacteria 2939674588 2939675984 351
365 iso_pu_bacteria 2945916053 2945918212 351
366 iso_pu_bacteria 2945920336 2945921500 351
367 iso_pu_bacteria 2945941187 2945942314 351
368 iso_pu_bacteria 2946059875 2946062063 351
369 iso_pu_bacteria 2953998280 2953999534 351
370 iso_pu_bacteria 2974302888 2974306245 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

202

308

0.91

PF04389

Peptidase_M28

Peptidase family M28

75

195

0.86

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

89

390

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tx8-assembly1.cif.gz_A-2 crystal structure of a succinyl-diaminopimelate desuccinylase (arge) from corynebacterium glutamicum atcc 13032 at 2.97 a resolution 0.881 2 351
3tx8-assembly1.cif.gz_A-2 crystal structure of a succinyl-diaminopimelate desuccinylase (arge) from corynebacterium glutamicum atcc 13032 at 2.97 a resolution 0.8668 2 351
3ct9-assembly1.cif.gz_B crystal structure of a putative zinc peptidase (np_812461.1) from bacteroides thetaiotaomicron vpi-5482 at 2.31 a resolution 0.8628 3 351
7lgp-assembly1.cif.gz_A dape enzyme from shigella flexneri 0.8115 6 351
4ppz-assembly1.cif.gz_A crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from neisseria meningitidis mc58 0.809 6 350
ID Description Score Start End Superfamily
3tx8A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9335 2 351 3.40.630.10
af_P9WHS9_166_276_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9006 166 273 3.40.630.10
3tx8A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8773 2 351 3.40.630.10
af_P9WHS9_166_276_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.87 166 273 3.40.630.10
3ct9A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8458 2 351 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A0K2R529-F1-model_v4 deleted 0.9723 1 344
AF-A0A7G7MK06-F1-model_v4 Succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) 0.9701 2 349 GO:0006526
GO:0008777
GO:0009014
GO:0009089
GO:0046872
AF-A0A353ZV57-F1-model_v4 Succinyl-diaminopimelate desuccinylase 0.9577 149 326 GO:0006526
GO:0008777
AF-A0A2W6U4Q3-F1-model_v4 deleted 0.9541 2 155
AF-A0A353ZV57-F1-model_v4 Succinyl-diaminopimelate desuccinylase 0.9525 149 326 GO:0006526
GO:0008777

Feature Viewer

pLDDT pTM Quality
93.72 0.88 High
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Predicted Structure (AlphaFold2)

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