F425534

General Info

Members Datasets Scaffolds Average Seq Length
370 174 740 788

Family's Representative Sequence

Representative Sequence 3300047443|Ga0495687_000422|Ga0495687_000422_34809_37484
Length 885
Sequence MDKERFLYLLQQYISDKATREEEEELFARMEFPESGEILTNFVKERWDHRQLKINYRVMPDADQAWQKMRANMQKAEQPLWKESTEKTGIIQYILKETYMFNNYFRIAWRNLMRGKTYSAINITGLAIGMAAAILIFLWIHNERSYDEFHKNKDRIYEVWNRVPFNGKISCGDAVSAPLARALEKDLPEVERAVRVNYNSNFLFTVGDKKMVKSGKMVDTGFLQMFSFPMLKGDPFTALNDMHSIVLTAAAAKSLFGDEDAMGKTVKIENKDNFTVTGVLKDLPNNTRFEFEYLLPWSYLKYGEGQDLGWDDNSTPTYVLLKPNANYAAVASKIKDLKQKYSDGAKKLKWELFMYPLHRWRLYSSFTDGVEDNGGRAPFVNLFGTIAGFILLIACINFMNLSTARSEKRAKEVGIRKVIGAQKSSLIVQFIGESVCLSFLAAIVAVFIVQISLPGYNQLVDKKLFIDFRSIYTWIAFIGFILFTGLLAGSYPAFYLSSFQPVKVLKGTFKKVNALVTPRKVLVVLQFTFATVLIICTIIVKQQIDYARDRATGYNKDNLVYHFMTGDIPKKYALIKNELLAAGVARSVTKTNSPLTQRWSDGWGQNWEGKDPNDNTTFDRFLADEGLAATAGLQFIQGRDFDLDQFPSDSTGLIINESSLKVMKFKDPIGKLVDDLGIKWHIVGVIKDFIFTSPYEPTRPILICGAKSRFMSFNVMQIKLNGKNSTASNLKKIQAIFSKYNPDYPFDIKFVDEEYARKFEDETNQGIFATIFISCLGLFGLAAYMAENRVKEIGVRKVLGASVTGITTLLSKDFVKLVIVSFFIAAPLAWWGMDKWLQSYTYRVSIEWWVFALAGFLSVMIALVTVSYQSIKAAVANPVKSLRAD

Samples

Sample ID Description Type Environment
1 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
74 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
75 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
119 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
120 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
121 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
122 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
123 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
124 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
125 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
126 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
127 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
128 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
129 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
133 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
140 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
145 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
153 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
154 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
155 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
156 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
157 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
158 2738541278 Niastella sp. CF465 Isolate Unclassified
159 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
160 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
161 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
162 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
163 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
164 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
165 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
166 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
167 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
168 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
169 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
170 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
171 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
172 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
173 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
174 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.86
Metatranscriptomes 0
Isolates 5.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.05
Nodule 0
Rhizoplane 0.27
Rhizosphere 87.84
Stem 0
Stem Tuber 0
Unclassified 2.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495687_000422 3300047443 Bacteria 52393
2 JGI24740J21852_10003888 3300001979 Bacteria 6484
3 JGI24737J22298_10000262 3300001990 Bacteria 17291
4 JGI24735J21928_10000002 3300002067 Bacteria 624895
5 rootH1_10041448 3300003316 Bacteria 11260
6 rootH2_10001414 3300003320 Bacteria 59840
7 rootL2_10016829 3300003322 Bacteria 4031
8 rootH1_10003212 3300003323 Bacteria 182359
9 Ga0055531_10000138 3300003794 Bacteria 82997
10 Ga0070683_100011222 3300005329 Bacteria 7730
11 Ga0070683_100019308 3300005329 Bacteria 6054
12 Ga0070690_100006049 3300005330 Bacteria 6845
13 Ga0068869_100021306 3300005334 Bacteria 4457
14 Ga0068869_100025493 3300005334 Unclassified 4106
15 Ga0068869_100032387 3300005334 Bacteria 3683
16 Ga0070666_10001627 3300005335 Bacteria 13666
17 Ga0070666_10002363 3300005335 Bacteria 11401
18 Ga0070666_10016442 3300005335 Bacteria 4734
19 Ga0070666_10024047 3300005335 Bacteria 3967
20 Ga0070680_100002215 3300005336 Bacteria 14332
21 Ga0070682_100003709 3300005337 Bacteria 8486
22 Ga0070682_100015699 3300005337 Bacteria 4392
23 Ga0068868_100017706 3300005338 Bacteria 5313
24 Ga0068868_100042007 3300005338 Bacteria 3565
25 Ga0070691_10001607 3300005341 Bacteria 9784
26 Ga0070668_100045942 3300005347 Bacteria 3351
27 Ga0070675_100020372 3300005354 Bacteria 5293
28 Ga0070671_100037103 3300005355 Bacteria 4042
29 Ga0070674_100004046 3300005356 Bacteria 8321
30 Ga0070673_100027191 3300005364 Bacteria 4238
31 Ga0070659_100009603 3300005366 Bacteria 7111
32 Ga0070667_100002577 3300005367 Bacteria 15746
33 Ga0070667_100033185 3300005367 Bacteria 4312
34 Ga0070667_100033409 3300005367 Unclassified 4299
35 Ga0070662_100039401 3300005457 Bacteria 3360
36 Ga0068867_100022473 3300005459 Unclassified 4511
37 Ga0070679_100001339 3300005530 Bacteria 21725
38 Ga0070679_100046820 3300005530 Bacteria 4311
39 Ga0070684_100009028 3300005535 Bacteria 7833
40 Ga0070684_100028964 3300005535 Bacteria 4689
41 Ga0068853_100000646 3300005539 Bacteria 23892
42 Ga0068853_100001368 3300005539 Bacteria 17591
43 Ga0068853_100010598 3300005539 Bacteria 7455
44 Ga0068853_100036374 3300005539 Bacteria 4186
45 Ga0070693_100018743 3300005547 Bacteria 3619
46 Ga0070665_100000013 3300005548 Bacteria 484927
47 Ga0070665_100000178 3300005548 Bacteria 113002
48 Ga0070665_100019500 3300005548 Bacteria 6808
49 Ga0068855_100000196 3300005563 Bacteria 78135
50 Ga0068855_100005654 3300005563 Bacteria 15265
51 Ga0068855_100006045 3300005563 Bacteria 14764
52 Ga0068855_100009685 3300005563 Bacteria 11631
53 Ga0068855_100011925 3300005563 Bacteria 10508
54 Ga0068855_100057015 3300005563 Bacteria 4580
55 Ga0068855_100057118 3300005563 Bacteria 4576
56 Ga0070664_100008245 3300005564 Bacteria 8425
57 Ga0068857_100001078 3300005577 Bacteria 21124
58 Ga0068857_100022109 3300005577 Bacteria 5595
59 Ga0068857_100049493 3300005577 Bacteria 3728
60 Ga0068854_100029775 3300005578 Bacteria 3783
61 Ga0068856_100003358 3300005614 Bacteria 16226
62 Ga0068856_100014177 3300005614 Bacteria 7705
63 Ga0068856_100020341 3300005614 Bacteria 6447
64 Ga0068856_100021104 3300005614 Bacteria 6330
65 Ga0068852_100000267 3300005616 Bacteria 34959
66 Ga0068859_100000191 3300005617 Bacteria 59351
67 Ga0068859_100007369 3300005617 Bacteria 11161
68 Ga0068859_100116988 3300005617 Bacteria 2731
69 Ga0068864_100008676 3300005618 Bacteria 8387
70 Ga0068861_100018871 3300005719 Bacteria 4917
71 Ga0068863_100004576 3300005841 Bacteria 13642
72 Ga0068858_100012854 3300005842 Bacteria 7894
73 Ga0068858_100017544 3300005842 Bacteria 6713
74 Ga0068860_100000094 3300005843 Bacteria 149488
75 Ga0068860_100025503 3300005843 Bacteria 5703
76 Ga0068860_100036578 3300005843 Bacteria 4703
77 Ga0097621_100000920 3300006237 Bacteria 20584
78 Ga0097621_100003381 3300006237 Bacteria 10982
79 Ga0097621_100007287 3300006237 Bacteria 7904
80 Ga0097621_100009201 3300006237 Bacteria 7163
81 Ga0097621_100024130 3300006237 Bacteria 4745
82 Ga0097621_100061525 3300006237 Bacteria 3079
83 Ga0068871_100032831 3300006358 Bacteria 4104
84 Ga0068871_100041835 3300006358 Bacteria 3676
85 Ga0068871_100076249 3300006358 Bacteria 2768
86 Ga0068865_100011529 3300006881 Bacteria 5538
87 Ga0068865_100057620 3300006881 Bacteria 2711
88 Ga0097620_100000191 3300006931 Bacteria 59351
89 Ga0097620_100007369 3300006931 Bacteria 11161
90 Ga0097620_100116984 3300006931 Bacteria 2731
91 Ga0105240_10000061 3300009093 Bacteria 218897
92 Ga0105240_10000086 3300009093 Bacteria 188623
93 Ga0105240_10000105 3300009093 Bacteria 172035
94 Ga0105240_10001967 3300009093 Bacteria 33956
95 Ga0105240_10002002 3300009093 Bacteria 33613
96 Ga0105240_10003044 3300009093 Bacteria 26372
97 Ga0105240_10004462 3300009093 Bacteria 21323
98 Ga0105240_10005236 3300009093 Bacteria 19384
99 Ga0105240_10007435 3300009093 Bacteria 15910
100 Ga0105240_10013185 3300009093 Bacteria 11370
101 Ga0105240_10040067 3300009093 Bacteria 5996
102 Ga0105240_10085493 3300009093 Bacteria 3864
103 Ga0111539_10063216 3300009094 Bacteria 4380
104 Ga0105245_10020005 3300009098 Bacteria 5867
105 Ga0105247_10003487 3300009101 Bacteria 10233
106 Ga0105247_10004995 3300009101 Bacteria 8425
107 Ga0105243_10082814 3300009148 Unclassified 2623
108 Ga0105241_10000523 3300009174 Bacteria 28909
109 Ga0105241_10004239 3300009174 Bacteria 10594
110 Ga0105241_10023807 3300009174 Unclassified 4543
111 Ga0105241_10034052 3300009174 Bacteria 3826
112 Ga0105242_10015164 3300009176 Bacteria 5984
113 Ga0105242_10020711 3300009176 Bacteria 5158
114 Ga0105242_10043475 3300009176 Bacteria 3634
115 Ga0105248_10007024 3300009177 Bacteria 12334
116 Ga0105237_10001124 3300009545 Bacteria 35879
117 Ga0105237_10002319 3300009545 Bacteria 23651
118 Ga0105237_10002803 3300009545 Bacteria 21168
119 Ga0105237_10009974 3300009545 Bacteria 10135
120 Ga0105237_10015029 3300009545 Bacteria 8066
121 Ga0105237_10016715 3300009545 Bacteria 7617
122 Ga0105237_10022543 3300009545 Bacteria 6460
123 Ga0105237_10026859 3300009545 Bacteria 5883
124 Ga0105237_10072076 3300009545 Bacteria 3448
125 Ga0105237_10088981 3300009545 Bacteria 3077
126 Ga0105238_10000422 3300009551 Bacteria 44567
127 Ga0105238_10014015 3300009551 Bacteria 8108
128 Ga0105238_10018910 3300009551 Bacteria 7016
129 Ga0105249_10003427 3300009553 Bacteria 13730
130 Ga0105249_10005916 3300009553 Bacteria 10595
131 Ga0105249_10026679 3300009553 Bacteria 5209
132 Ga0105249_10030918 3300009553 Bacteria 4840
133 Ga0105239_10000126 3300010375 Bacteria 107921
134 Ga0105239_10000295 3300010375 Bacteria 73415
135 Ga0105239_10000566 3300010375 Bacteria 53074
136 Ga0105239_10000652 3300010375 Bacteria 49416
137 Ga0105239_10001195 3300010375 Bacteria 35500
138 Ga0105239_10003226 3300010375 Bacteria 20167
139 Ga0105239_10007304 3300010375 Bacteria 12685
140 Ga0105239_10008286 3300010375 Bacteria 11849
141 Ga0105239_10008727 3300010375 Bacteria 11476
142 Ga0105239_10029906 3300010375 Bacteria 5991
143 Ga0105239_10038315 3300010375 Bacteria 5253
144 Ga0105239_10063271 3300010375 Bacteria 4062
145 Ga0105246_10003885 3300011119 Bacteria 9052
146 Ga0105246_10007218 3300011119 Bacteria 6809
147 Ga0157373_10004143 3300013100 Bacteria 10932
148 Ga0157371_10000021 3300013102 Bacteria 301017
149 Ga0157371_10000263 3300013102 Bacteria 71557
150 Ga0157371_10000499 3300013102 Bacteria 47558
151 Ga0157371_10000610 3300013102 Bacteria 42489
152 Ga0157371_10005904 3300013102 Bacteria 10228
153 Ga0157371_10015235 3300013102 Bacteria 5774
154 Ga0157371_10041434 3300013102 Bacteria 3286
155 Ga0157370_10004949 3300013104 Bacteria 15080
156 Ga0157370_10007529 3300013104 Bacteria 11829
157 Ga0157370_10064163 3300013104 Bacteria 3478
158 Ga0157369_10017777 3300013105 Bacteria 7983
159 Ga0157369_10031835 3300013105 Bacteria 5804
160 Ga0157369_10058757 3300013105 Bacteria 4148
161 Ga0157374_10000001 3300013296 Bacteria 1077351
162 Ga0157374_10000003 3300013296 Bacteria 854471
163 Ga0157374_10006401 3300013296 Bacteria 9996
164 Ga0157374_10041205 3300013296 Bacteria 4255
165 Ga0157378_10002406 3300013297 Bacteria 16635
166 Ga0157378_10003435 3300013297 Bacteria 14052
167 Ga0157378_10010215 3300013297 Bacteria 8192
168 Ga0157378_10058338 3300013297 Bacteria 3442
169 Ga0163162_10000008 3300013306 Bacteria 316194
170 Ga0163162_10000225 3300013306 Bacteria 51751
171 Ga0163162_10003468 3300013306 Bacteria 15065
172 Ga0163162_10003891 3300013306 Bacteria 14333
173 Ga0163162_10012474 3300013306 Bacteria 8303
174 Ga0163162_10017032 3300013306 Bacteria 7111
175 Ga0163162_10022032 3300013306 Bacteria 6278
176 Ga0163162_10036665 3300013306 Bacteria 4889
177 Ga0163162_10043004 3300013306 Bacteria 4522
178 Ga0157372_10000305 3300013307 Bacteria 54763
179 Ga0157372_10000635 3300013307 Bacteria 38523
180 Ga0157372_10007243 3300013307 Bacteria 11816
181 Ga0157372_10014033 3300013307 Bacteria 8561
182 Ga0157372_10034862 3300013307 Bacteria 5537
183 Ga0157372_10035112 3300013307 Bacteria 5517
184 Ga0157372_10049420 3300013307 Bacteria 4676
185 Ga0157372_10063409 3300013307 Bacteria 4143
186 Ga0157375_10033921 3300013308 Bacteria 4856
187 Ga0163163_10001471 3300014325 Bacteria 19928
188 Ga0163163_10056759 3300014325 Unclassified 3870
189 Ga0157376_10000137 3300014969 Bacteria 49673
190 Ga0157376_10003728 3300014969 Bacteria 10528
191 Ga0157376_10006238 3300014969 Bacteria 8403
192 Ga0157376_10011765 3300014969 Bacteria 6464
193 Ga0157376_10042481 3300014969 Bacteria 3726
194 Ga0157376_10050376 3300014969 Bacteria 3455
195 Ga0157376_10069039 3300014969 Bacteria 2995
196 Ga0157376_10095160 3300014969 Bacteria 2590
197 Ga0163161_10010474 3300017792 Bacteria 6419
198 Ga0163161_10043665 3300017792 Bacteria 3228
199 Ga0209646_1000045 3300025246 Bacteria 333765
200 Ga0209026_1000075 3300025250 Bacteria 202874
201 Ga0209233_1002737 3300025261 Bacteria 6346
202 Ga0209758_1009456 3300025297 Bacteria 6055
203 Ga0209050_1003850 3300025298 Bacteria 10686
204 Ga0207426_1000157 3300025302 Bacteria 178442
205 Ga0207426_1000159 3300025302 Bacteria 175899
206 Ga0209257_1000001 3300025304 Bacteria 2274655
207 Ga0207710_10002458 3300025900 Bacteria 8590
208 Ga0207710_10008039 3300025900 Bacteria 4459
209 Ga0207688_10012288 3300025901 Bacteria 4658
210 Ga0207680_10000647 3300025903 Bacteria 16423
211 Ga0207680_10001392 3300025903 Bacteria 11431
212 Ga0207680_10039742 3300025903 Bacteria 2732
213 Ga0207647_10000076 3300025904 Bacteria 75824
214 Ga0207647_10025082 3300025904 Bacteria 3924
215 Ga0207645_10002537 3300025907 Bacteria 14291
216 Ga0207705_10013683 3300025909 Bacteria 5853
217 Ga0207654_10000798 3300025911 Bacteria 17342
218 Ga0207654_10002076 3300025911 Bacteria 10270
219 Ga0207654_10002124 3300025911 Bacteria 10149
220 Ga0207654_10008070 3300025911 Bacteria 5306
221 Ga0207654_10025662 3300025911 Bacteria 3182
222 Ga0207707_10000947 3300025912 Bacteria 27983
223 Ga0207707_10001097 3300025912 Bacteria 25811
224 Ga0207695_10000057 3300025913 Bacteria 376090
225 Ga0207695_10000068 3300025913 Bacteria 324859
226 Ga0207695_10000089 3300025913 Bacteria 273463
227 Ga0207695_10000175 3300025913 Bacteria 188658
228 Ga0207695_10000193 3300025913 Bacteria 172070
229 Ga0207695_10002809 3300025913 Bacteria 25312
230 Ga0207695_10016336 3300025913 Bacteria 8687
231 Ga0207695_10017949 3300025913 Bacteria 8195
232 Ga0207695_10021878 3300025913 Bacteria 7280
233 Ga0207695_10038562 3300025913 Bacteria 5142
234 Ga0207671_10001507 3300025914 Bacteria 26846
235 Ga0207671_10003009 3300025914 Bacteria 17287
236 Ga0207671_10004758 3300025914 Bacteria 12814
237 Ga0207671_10021238 3300025914 Bacteria 4929
238 Ga0207671_10023699 3300025914 Bacteria 4625
239 Ga0207660_10001977 3300025917 Bacteria 13662
240 Ga0207657_10002672 3300025919 Bacteria 19227
241 Ga0207652_10000828 3300025921 Bacteria 29477
242 Ga0207652_10001351 3300025921 Bacteria 21797
243 Ga0207652_10084525 3300025921 Bacteria 2780
244 Ga0207694_10007541 3300025924 Bacteria 8245
245 Ga0207644_10003397 3300025931 Bacteria 10272
246 Ga0207690_10004378 3300025932 Bacteria 8335
247 Ga0207690_10007882 3300025932 Bacteria 6327
248 Ga0207706_10000138 3300025933 Bacteria 79643
249 Ga0207706_10000657 3300025933 Bacteria 36545
250 Ga0207704_10017939 3300025938 Bacteria 3683
251 Ga0207691_10016121 3300025940 Bacteria 7098
252 Ga0207689_10002428 3300025942 Bacteria 17345
253 Ga0207689_10002975 3300025942 Bacteria 15632
254 Ga0207689_10003003 3300025942 Bacteria 15560
255 Ga0207689_10005101 3300025942 Bacteria 11812
256 Ga0207689_10014368 3300025942 Bacteria 6736
257 Ga0207679_10021903 3300025945 Bacteria 4342
258 Ga0207667_10000037 3300025949 Bacteria 297252
259 Ga0207667_10000294 3300025949 Bacteria 68814
260 Ga0207667_10000373 3300025949 Bacteria 60563
261 Ga0207667_10008279 3300025949 Bacteria 12371
262 Ga0207667_10009968 3300025949 Bacteria 11144
263 Ga0207667_10022577 3300025949 Bacteria 6946
264 Ga0207667_10037445 3300025949 Bacteria 5184
265 Ga0207712_10016614 3300025961 Unclassified 4771
266 Ga0207712_10045207 3300025961 Bacteria 3048
267 Ga0207668_10030618 3300025972 Bacteria 3538
268 Ga0207658_10053744 3300025986 Bacteria 2977
269 Ga0207677_10039724 3300026023 Bacteria 3096
270 Ga0207703_10017553 3300026035 Bacteria 5587
271 Ga0207639_10009418 3300026041 Bacteria 6737
272 Ga0207639_10012708 3300026041 Bacteria 5872
273 Ga0207639_10080923 3300026041 Bacteria 2571
274 Ga0207702_10005501 3300026078 Bacteria 11081
275 Ga0207641_10000097 3300026088 Bacteria 123547
276 Ga0207641_10000200 3300026088 Bacteria 80556
277 Ga0207641_10055498 3300026088 Bacteria 3364
278 Ga0207648_10008088 3300026089 Bacteria 10241
279 Ga0207674_10000987 3300026116 Bacteria 37118
280 Ga0207674_10030985 3300026116 Bacteria 5621
281 Ga0207675_100005801 3300026118 Bacteria 11805
282 Ga0207675_100027899 3300026118 Bacteria 5259
283 Ga0207675_100052338 3300026118 Bacteria 3810
284 Ga0207683_10015203 3300026121 Bacteria 6550
285 Ga0207698_10003396 3300026142 Bacteria 9582
286 Ga0207698_10030775 3300026142 Bacteria 3865
287 Ga0268266_10000024 3300028379 Bacteria 490820
288 Ga0268266_10000098 3300028379 Bacteria 182784
289 Ga0268265_10021414 3300028380 Bacteria 4529
290 Ga0268264_10000197 3300028381 Bacteria 123614
291 Ga0307515_10000001 3300028794 Bacteria 4259510
292 Ga0307515_10000074 3300028794 Bacteria 229874
293 Ga0307515_10000223 3300028794 Bacteria 140434
294 Ga0307515_10010381 3300028794 Bacteria 17844
295 Ga0316183_1181747 3300030742 Bacteria 46975
296 Ga0316181_1034997 3300030744 Bacteria 38484
297 Ga0307509_10008296 3300031507 Bacteria 13271
298 Ga0307509_10016726 3300031507 Bacteria 8475
299 Ga0307509_10028986 3300031507 Bacteria 6148
300 Ga0307508_10000446 3300031616 Bacteria 49383
301 Ga0307508_10001120 3300031616 Bacteria 31019
302 Ga0307516_10004024 3300031730 Bacteria 18423
303 Ga0307516_10013356 3300031730 Bacteria 8760
304 Ga0307407_10000022 3300031903 Bacteria 120355
305 Ga0307416_100000047 3300032002 Bacteria 120385
306 Ga0307414_10000024 3300032004 Bacteria 205727
307 Ga0307510_10000062 3300033180 Bacteria 81920
308 Ga0307510_10001922 3300033180 Bacteria 23341
309 Ga0395899_0020179 3300037312 Bacteria 5056
310 Ga0466972_0002022 3300044658 Bacteria 9933
311 Ga0453684_0027806 3300044712 Bacteria 8094
312 Ga0495638_0000003 3300046460 Bacteria 888792
313 Ga0495638_0026295 3300046460 Bacteria 3773
314 Ga0495651_0054656 3300046462 Bacteria 3070
315 Ga0495650_0000057 3300046471 Bacteria 303569
316 Ga0495580_0046301 3300046472 Unclassified 3087
317 Ga0495585_0000041 3300046492 Bacteria 126995
318 Ga0495585_0001968 3300046492 Bacteria 15306
319 Ga0495606_0000142 3300046507 Bacteria 123277
320 Ga0495606_0007132 3300046507 Bacteria 10100
321 Ga0495606_0007620 3300046507 Bacteria 9624
322 Ga0495610_0003001 3300046512 Bacteria 13571
323 Ga0495616_0007413 3300046513 Bacteria 6565
324 Ga0495609_0004551 3300046538 Bacteria 7537
325 Ga0495633_0000014 3300046558 Bacteria 261742
326 Ga0495633_0000344 3300046558 Bacteria 51775
327 Ga0495633_0002446 3300046558 Bacteria 13110
328 Ga0495668_0000003 3300046616 Bacteria 695023
329 Ga0495611_0000010 3300046648 Bacteria 156661
330 Ga0495611_0000150 3300046648 Bacteria 49672
331 Ga0495625_0000003 3300046660 Bacteria 686847
332 Ga0495625_0000248 3300046660 Bacteria 84339
333 Ga0495625_0001107 3300046660 Bacteria 34929
334 Ga0495661_0004330 3300046665 Bacteria 10278
335 Ga0495649_0000002 3300046694 Bacteria 1093458
336 Ga0495660_0026940 3300046810 Bacteria 3254
337 Ga0495672_0039699 3300047320 Bacteria 2861
338 Ga0495687_001533 3300047443 Bacteria 21052
339 Ga0495687_003631 3300047443 Bacteria 11014
340 Ga0495687_011464 3300047443 Bacteria 4765
341 Ga0495686_0000078 3300047472 Bacteria 203927
342 Ga0496121_0000020 3300048924 Bacteria 498732
343 nmdc:mga0k408_19711_c1 3300050493 Bacteria 3772
344 nmdc:mga0k408_21240_c1 3300050493 Bacteria 3645
345 nmdc:mga08y16_77159_c1 3300050511 Bacteria 3473
346 Ga0500646_0001592 3300053090 Bacteria 5987
347 Ga0500569_000173 3300053109 Bacteria 10199
348 Ga0500568_0003862 3300053139 Bacteria 8171
349 Ga0500616_0000007 3300053153 Bacteria 836875
350 Ga0500616_0026663 3300053153 Bacteria 3196
351 Ga0500624_000278 3300053157 Bacteria 17649
352 2599478786 2599185184 Bacteria 6430550
353 2738727773 2738541278 Bacteria 9755573
354 2819681512 2818991460 Bacteria 7595395
355 2852623477 2852623160 Bacteria 4376875
356 2884937623 2884933994 Bacteria 4535041
357 2886628838 2886627955 Bacteria 7618130
358 2911140813 2911138879 Bacteria 5811561
359 2919697343 2919692658 Bacteria 5943958
360 2919697344 2919692658 Bacteria 5943958
361 2928080155 2928078545 Bacteria 6534839
362 2928149672 2928147474 Bacteria 6512076
363 2929180378 2929177148 Bacteria 7883697
364 2929241906 2929239360 Bacteria 7745570
365 2929926247 2929921140 Bacteria 8649150
366 2932083499 2932082852 Bacteria 6563563
367 2945982771 2945977869 Bacteria 7777518
368 2946017836 2946013367 Bacteria 7766675
369 2954018692 2954016120 Bacteria 6446024
370 8003157833 8003151029 Bacteria 8187759
371 Ga0495687_000422
372 JGI24740J21852_10003888
373 JGI24737J22298_10000262
374 JGI24735J21928_10000002
375 rootH1_10041448
376 rootH2_10001414
377 rootL2_10016829
378 rootH1_10003212
379 Ga0055531_10000138
380 Ga0070683_100011222
381 Ga0070683_100019308
382 Ga0070690_100006049
383 Ga0068869_100021306
384 Ga0068869_100025493
385 Ga0068869_100032387
386 Ga0070666_10001627
387 Ga0070666_10002363
388 Ga0070666_10016442
389 Ga0070666_10024047
390 Ga0070680_100002215
391 Ga0070682_100003709
392 Ga0070682_100015699
393 Ga0068868_100017706
394 Ga0068868_100042007
395 Ga0070691_10001607
396 Ga0070668_100045942
397 Ga0070675_100020372
398 Ga0070671_100037103
399 Ga0070674_100004046
400 Ga0070673_100027191
401 Ga0070659_100009603
402 Ga0070667_100002577
403 Ga0070667_100033185
404 Ga0070667_100033409
405 Ga0070662_100039401
406 Ga0068867_100022473
407 Ga0070679_100001339
408 Ga0070679_100046820
409 Ga0070684_100009028
410 Ga0070684_100028964
411 Ga0068853_100000646
412 Ga0068853_100001368
413 Ga0068853_100010598
414 Ga0068853_100036374
415 Ga0070693_100018743
416 Ga0070665_100000013
417 Ga0070665_100000178
418 Ga0070665_100019500
419 Ga0068855_100000196
420 Ga0068855_100005654
421 Ga0068855_100006045
422 Ga0068855_100009685
423 Ga0068855_100011925
424 Ga0068855_100057015
425 Ga0068855_100057118
426 Ga0070664_100008245
427 Ga0068857_100001078
428 Ga0068857_100022109
429 Ga0068857_100049493
430 Ga0068854_100029775
431 Ga0068856_100003358
432 Ga0068856_100014177
433 Ga0068856_100020341
434 Ga0068856_100021104
435 Ga0068852_100000267
436 Ga0068859_100000191
437 Ga0068859_100007369
438 Ga0068859_100116988
439 Ga0068864_100008676
440 Ga0068861_100018871
441 Ga0068863_100004576
442 Ga0068858_100012854
443 Ga0068858_100017544
444 Ga0068860_100000094
445 Ga0068860_100025503
446 Ga0068860_100036578
447 Ga0097621_100000920
448 Ga0097621_100003381
449 Ga0097621_100007287
450 Ga0097621_100009201
451 Ga0097621_100024130
452 Ga0097621_100061525
453 Ga0068871_100032831
454 Ga0068871_100041835
455 Ga0068871_100076249
456 Ga0068865_100011529
457 Ga0068865_100057620
458 Ga0097620_100000191
459 Ga0097620_100007369
460 Ga0097620_100116984
461 Ga0105240_10000061
462 Ga0105240_10000086
463 Ga0105240_10000105
464 Ga0105240_10001967
465 Ga0105240_10002002
466 Ga0105240_10003044
467 Ga0105240_10004462
468 Ga0105240_10005236
469 Ga0105240_10007435
470 Ga0105240_10013185
471 Ga0105240_10040067
472 Ga0105240_10085493
473 Ga0111539_10063216
474 Ga0105245_10020005
475 Ga0105247_10003487
476 Ga0105247_10004995
477 Ga0105243_10082814
478 Ga0105241_10000523
479 Ga0105241_10004239
480 Ga0105241_10023807
481 Ga0105241_10034052
482 Ga0105242_10015164
483 Ga0105242_10020711
484 Ga0105242_10043475
485 Ga0105248_10007024
486 Ga0105237_10001124
487 Ga0105237_10002319
488 Ga0105237_10002803
489 Ga0105237_10009974
490 Ga0105237_10015029
491 Ga0105237_10016715
492 Ga0105237_10022543
493 Ga0105237_10026859
494 Ga0105237_10072076
495 Ga0105237_10088981
496 Ga0105238_10000422
497 Ga0105238_10014015
498 Ga0105238_10018910
499 Ga0105249_10003427
500 Ga0105249_10005916
501 Ga0105249_10026679
502 Ga0105249_10030918
503 Ga0105239_10000126
504 Ga0105239_10000295
505 Ga0105239_10000566
506 Ga0105239_10000652
507 Ga0105239_10001195
508 Ga0105239_10003226
509 Ga0105239_10007304
510 Ga0105239_10008286
511 Ga0105239_10008727
512 Ga0105239_10029906
513 Ga0105239_10038315
514 Ga0105239_10063271
515 Ga0105246_10003885
516 Ga0105246_10007218
517 Ga0157373_10004143
518 Ga0157371_10000021
519 Ga0157371_10000263
520 Ga0157371_10000499
521 Ga0157371_10000610
522 Ga0157371_10005904
523 Ga0157371_10015235
524 Ga0157371_10041434
525 Ga0157370_10004949
526 Ga0157370_10007529
527 Ga0157370_10064163
528 Ga0157369_10017777
529 Ga0157369_10031835
530 Ga0157369_10058757
531 Ga0157374_10000001
532 Ga0157374_10000003
533 Ga0157374_10006401
534 Ga0157374_10041205
535 Ga0157378_10002406
536 Ga0157378_10003435
537 Ga0157378_10010215
538 Ga0157378_10058338
539 Ga0163162_10000008
540 Ga0163162_10000225
541 Ga0163162_10003468
542 Ga0163162_10003891
543 Ga0163162_10012474
544 Ga0163162_10017032
545 Ga0163162_10022032
546 Ga0163162_10036665
547 Ga0163162_10043004
548 Ga0157372_10000305
549 Ga0157372_10000635
550 Ga0157372_10007243
551 Ga0157372_10014033
552 Ga0157372_10034862
553 Ga0157372_10035112
554 Ga0157372_10049420
555 Ga0157372_10063409
556 Ga0157375_10033921
557 Ga0163163_10001471
558 Ga0163163_10056759
559 Ga0157376_10000137
560 Ga0157376_10003728
561 Ga0157376_10006238
562 Ga0157376_10011765
563 Ga0157376_10042481
564 Ga0157376_10050376
565 Ga0157376_10069039
566 Ga0157376_10095160
567 Ga0163161_10010474
568 Ga0163161_10043665
569 Ga0209646_1000045
570 Ga0209026_1000075
571 Ga0209233_1002737
572 Ga0209758_1009456
573 Ga0209050_1003850
574 Ga0207426_1000157
575 Ga0207426_1000159
576 Ga0209257_1000001
577 Ga0207710_10002458
578 Ga0207710_10008039
579 Ga0207688_10012288
580 Ga0207680_10000647
581 Ga0207680_10001392
582 Ga0207680_10039742
583 Ga0207647_10000076
584 Ga0207647_10025082
585 Ga0207645_10002537
586 Ga0207705_10013683
587 Ga0207654_10000798
588 Ga0207654_10002076
589 Ga0207654_10002124
590 Ga0207654_10008070
591 Ga0207654_10025662
592 Ga0207707_10000947
593 Ga0207707_10001097
594 Ga0207695_10000057
595 Ga0207695_10000068
596 Ga0207695_10000089
597 Ga0207695_10000175
598 Ga0207695_10000193
599 Ga0207695_10002809
600 Ga0207695_10016336
601 Ga0207695_10017949
602 Ga0207695_10021878
603 Ga0207695_10038562
604 Ga0207671_10001507
605 Ga0207671_10003009
606 Ga0207671_10004758
607 Ga0207671_10021238
608 Ga0207671_10023699
609 Ga0207660_10001977
610 Ga0207657_10002672
611 Ga0207652_10000828
612 Ga0207652_10001351
613 Ga0207652_10084525
614 Ga0207694_10007541
615 Ga0207644_10003397
616 Ga0207690_10004378
617 Ga0207690_10007882
618 Ga0207706_10000138
619 Ga0207706_10000657
620 Ga0207704_10017939
621 Ga0207691_10016121
622 Ga0207689_10002428
623 Ga0207689_10002975
624 Ga0207689_10003003
625 Ga0207689_10005101
626 Ga0207689_10014368
627 Ga0207679_10021903
628 Ga0207667_10000037
629 Ga0207667_10000294
630 Ga0207667_10000373
631 Ga0207667_10008279
632 Ga0207667_10009968
633 Ga0207667_10022577
634 Ga0207667_10037445
635 Ga0207712_10016614
636 Ga0207712_10045207
637 Ga0207668_10030618
638 Ga0207658_10053744
639 Ga0207677_10039724
640 Ga0207703_10017553
641 Ga0207639_10009418
642 Ga0207639_10012708
643 Ga0207639_10080923
644 Ga0207702_10005501
645 Ga0207641_10000097
646 Ga0207641_10000200
647 Ga0207641_10055498
648 Ga0207648_10008088
649 Ga0207674_10000987
650 Ga0207674_10030985
651 Ga0207675_100005801
652 Ga0207675_100027899
653 Ga0207675_100052338
654 Ga0207683_10015203
655 Ga0207698_10003396
656 Ga0207698_10030775
657 Ga0268266_10000024
658 Ga0268266_10000098
659 Ga0268265_10021414
660 Ga0268264_10000197
661 Ga0307515_10000001
662 Ga0307515_10000074
663 Ga0307515_10000223
664 Ga0307515_10010381
665 Ga0316183_1181747
666 Ga0316181_1034997
667 Ga0307509_10008296
668 Ga0307509_10016726
669 Ga0307509_10028986
670 Ga0307508_10000446
671 Ga0307508_10001120
672 Ga0307516_10004024
673 Ga0307516_10013356
674 Ga0307407_10000022
675 Ga0307416_100000047
676 Ga0307414_10000024
677 Ga0307510_10000062
678 Ga0307510_10001922
679 Ga0395899_0020179
680 Ga0466972_0002022
681 Ga0453684_0027806
682 Ga0495638_0000003
683 Ga0495638_0026295
684 Ga0495651_0054656
685 Ga0495650_0000057
686 Ga0495580_0046301
687 Ga0495585_0000041
688 Ga0495585_0001968
689 Ga0495606_0000142
690 Ga0495606_0007132
691 Ga0495606_0007620
692 Ga0495610_0003001
693 Ga0495616_0007413
694 Ga0495609_0004551
695 Ga0495633_0000014
696 Ga0495633_0000344
697 Ga0495633_0002446
698 Ga0495668_0000003
699 Ga0495611_0000010
700 Ga0495611_0000150
701 Ga0495625_0000003
702 Ga0495625_0000248
703 Ga0495625_0001107
704 Ga0495661_0004330
705 Ga0495649_0000002
706 Ga0495660_0026940
707 Ga0495672_0039699
708 Ga0495687_001533
709 Ga0495687_003631
710 Ga0495687_011464
711 Ga0495686_0000078
712 Ga0496121_0000020
713 nmdc:mga0k408_19711_c1
714 nmdc:mga0k408_21240_c1
715 nmdc:mga08y16_77159_c1
716 Ga0500646_0001592
717 Ga0500569_000173
718 Ga0500568_0003862
719 Ga0500616_0000007
720 Ga0500616_0026663
721 Ga0500624_000278
722 2599478786
723 2738727773
724 2819681512
725 2852623477
726 2884937623
727 2886628838
728 2911140813
729 2919697343
730 2919697344
731 2928080155
732 2928149672
733 2929180378
734 2929241906
735 2929926247
736 2932083499
737 2945982771
738 2946017836
739 2954018692
740 8003157833

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

766

878

0.95

PF02687

FtsX

FtsX-like permease family

384

501

0.89

PF12704

MacB_PCD

MacB-like periplasmic core domain

119

337

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.844 51 257
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7798 51 257
3is6-assembly1.cif.gz_A the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7413 51 283
3is6-assembly1.cif.gz_A the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7271 51 283
8i6q-assembly1.cif.gz_C cryo-em structure of pseudomonas aeruginosa ftse(wt)x complex in peptidisc 0.7028 278 399
ID Description Score Start End Superfamily
af_Q54P37_127_327_3.30.760.10 Alpha Beta;2-Layer Sandwich;RNA Cap, Translation Initiation Factor Eif4e;RNA Cap, Translation Initiation Factor Eif4e 0.5872 611 654 3.30.760.10
af_A0A0P0X1Q4_273_431_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4391 281 415 1.20.1250.20
af_A1L200_18_226_3.30.760.10 Alpha Beta;2-Layer Sandwich;RNA Cap, Translation Initiation Factor Eif4e;RNA Cap, Translation Initiation Factor Eif4e 0.4368 609 661 3.30.760.10
af_Q6I630_273_406_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4104 281 399 1.20.1250.20
af_Q6Z493_269_427_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3937 281 410 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A561ICR3-F1-model_v4 deleted 0.9689 8 792
AF-A0A3N0ES86-F1-model_v4 FtsX-like permease family protein 0.9679 1 792 GO:0005886
GO:0022857
AF-A0A3N0ES86-F1-model_v4 FtsX-like permease family protein 0.9667 1 792 GO:0005886
GO:0022857
AF-A0A3N5RGT8-F1-model_v4 ABC transporter permease 0.9662 1 792 GO:0005886
GO:0022857
AF-A0A561ICR3-F1-model_v4 deleted 0.9652 8 792

Map