F425855

General Info

Members Datasets Scaffolds Average Seq Length
371 205 742 304

Family's Representative Sequence

Representative Sequence 3300048920|Ga0496117_0058701|Ga0496117_0058701_1596_2558
Length 320
Sequence MPSSDQNPMSSMPSSSPVTALASIAGDGLRPTLTELIALRGTTTHRGQPGRGRHGLVGPVPAATRGRGMEYAESREYVAGDDARHIDWRVTARTGRAHTKLFQAERERLSLIVADTSPALFFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASEAPIAPRSGQRGVLPVLDALARWYTQPPSGDAGLEVALDHAARLLRPGARLTVLADARSASRISATRWSGLALHHEVVVIVLVDPLELAPPARALSFDVRGERIAIDLSTQAGRARWQAEFVAPLEQLTAVLQARGVRLHRLSTDDASDAWLGGSAAVRSR

Samples

Sample ID Description Type Environment
1 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
10 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
18 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
34 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
35 3300012482 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510 Metagenome Rhizosphere
36 3300012510 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610 Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
43 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
44 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
45 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
48 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
49 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
57 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
78 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
79 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
80 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
94 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
95 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
96 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
97 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
98 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
99 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
100 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
101 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
102 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
109 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
112 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
113 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
114 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
118 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
119 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
122 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
156 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
157 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
158 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
159 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
160 2643221586 Lysobacter sp. Root667 Isolate Unclassified
161 2643221593 Lysobacter sp. Root690 Isolate Unclassified
162 2643221612 Lysobacter sp. Root76 Isolate Unclassified
163 2643221695 Lysobacter sp. Root494 Isolate Unclassified
164 2643221720 Lysobacter sp. Root916 Isolate Unclassified
165 2643221727 Lysobacter sp. Root96 Isolate Unclassified
166 2643221728 Lysobacter sp. Root983 Isolate Unclassified
167 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
168 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
169 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
170 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
171 2818991457 Xanthomonas translucens 569 Isolate Unclassified
172 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
173 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
174 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
175 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
176 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
177 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
178 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
179 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
180 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
181 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
182 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
183 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
184 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
185 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
186 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
187 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
188 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
189 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
190 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
191 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
192 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
193 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
194 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
195 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
196 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
197 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
198 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
199 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
200 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
201 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
202 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
203 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
204 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
205 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.52
Metatranscriptomes 0
Isolates 13.48

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 23.72
Nodule 0.27
Rhizoplane 2.96
Rhizosphere 47.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496117_0058701 3300048920 Bacteria 2663
2 JGI25152J39213_1000069 3300002773 Bacteria 67815
3 JGI25150J39212_1000214 3300002774 Bacteria 31523
4 JGI25151J46595_10000105 3300003187 Bacteria 113763
5 JGI25151J46595_10000116 3300003187 Bacteria 107172
6 JGI25153J46596_10000077 3300003215 Bacteria 113763
7 rootL2_10108108 3300003322 Bacteria 5679
8 rootH1_10128132 3300003323 Bacteria 4080
9 rootH1_10234090 3300003323 Bacteria 2166
10 Ga0055526_1000126 3300003771 Bacteria 67619
11 Ga0055537_1000088 3300003773 Bacteria 66713
12 Ga0055537_1000812 3300003773 Bacteria 15462
13 Ga0055524_1000074 3300003775 Bacteria 122843
14 Ga0055536_1003391 3300003781 Bacteria 8577
15 Ga0055536_1003673 3300003781 Bacteria 8161
16 Ga0055536_1004152 3300003781 Bacteria 7503
17 Ga0055536_1023551 3300003781 Bacteria 1807
18 Ga0055534_1000097 3300003784 Bacteria 67619
19 Ga0055534_1000154 3300003784 Bacteria 51139
20 Ga0055528_1000028 3300003790 Bacteria 122843
21 Ga0055528_1002336 3300003790 Bacteria 10259
22 Ga0055530_10001279 3300003791 Bacteria 19016
23 Ga0055530_10001477 3300003791 Bacteria 17070
24 Ga0055530_10003319 3300003791 Bacteria 9293
25 Ga0055540_1013188 3300003792 Bacteria 2543
26 Ga0055531_10002804 3300003794 Bacteria 11428
27 Ga0055531_10005375 3300003794 Bacteria 7506
28 Ga0055531_10005379 3300003794 Bacteria 7503
29 Ga0055531_10005479 3300003794 Bacteria 7428
30 Ga0055531_10005799 3300003794 Bacteria 7150
31 Ga0055531_10007018 3300003794 Bacteria 6240
32 Ga0055531_10014255 3300003794 Bacteria 3595
33 Ga0058692_1000013 3300003856 Bacteria 316299
34 Ga0058692_1000035 3300003856 Bacteria 152983
35 Ga0065704_10075085 3300005289 Bacteria 5795
36 Ga0070670_100009586 3300005331 Bacteria 8265
37 Ga0070670_100010441 3300005331 Bacteria 7926
38 Ga0070660_100219282 3300005339 Bacteria 1546
39 Ga0070661_100114048 3300005344 Bacteria 2020
40 Ga0070669_100044168 3300005353 Bacteria 3247
41 Ga0070671_100321894 3300005355 Bacteria 1318
42 Ga0070674_100077178 3300005356 Bacteria 2371
43 Ga0070681_10141264 3300005458 Bacteria 2338
44 Ga0068867_100069180 3300005459 Bacteria 2636
45 Ga0070679_100044877 3300005530 Bacteria 4403
46 Ga0070672_100008578 3300005543 Bacteria 7000
47 Ga0070665_100372215 3300005548 Bacteria 1435
48 Ga0068864_100097994 3300005618 Bacteria 2596
49 Ga0081539_10025036 3300005985 Bacteria 3856
50 Ga0075364_10000775 3300006051 Bacteria 16800
51 Ga0075364_10031464 3300006051 Bacteria 3409
52 Ga0075364_10229276 3300006051 Bacteria 1261
53 Ga0105251_10000067 3300009011 Bacteria 99481
54 Ga0105032_100351 3300009979 Bacteria 4697
55 Ga0157318_1000277 3300012482 Bacteria 2028
56 Ga0157316_1000494 3300012510 Bacteria 2089
57 Ga0157371_10000184 3300013102 Bacteria 92100
58 Ga0157371_10145774 3300013102 Bacteria 1687
59 Ga0157370_10001564 3300013104 Bacteria 28327
60 Ga0157370_10028425 3300013104 Bacteria 5500
61 Ga0157370_10215800 3300013104 Bacteria 1778
62 Ga0157369_10058503 3300013105 Bacteria 4158
63 Ga0157372_10026650 3300013307 Bacteria 6290
64 Ga0157372_10376677 3300013307 Bacteria 1654
65 Ga0157375_10642466 3300013308 Bacteria 1218
66 Ga0182008_10003101 3300014497 Bacteria 10188
67 Ga0182006_1039019 3300015261 Bacteria 1876
68 Ga0182005_1000213 3300015265 Bacteria 38351
69 Ga0182005_1001924 3300015265 Bacteria 7868
70 Ga0183360_10001 3300015689 Bacteria 3943671
71 Ga0163161_10004793 3300017792 Bacteria 9421
72 Ga0163161_10169756 3300017792 Bacteria 1667
73 Ga0207425_1000045 3300025245 Bacteria 194257
74 Ga0209129_1000057 3300025258 Bacteria 253632
75 Ga0209565_1000023 3300025263 Bacteria 388244
76 Ga0209565_1000034 3300025263 Bacteria 312950
77 Ga0209565_1003614 3300025263 Bacteria 4939
78 Ga0209673_1000039 3300025273 Bacteria 312950
79 Ga0209673_1000047 3300025273 Bacteria 289276
80 Ga0209130_1007429 3300025284 Bacteria 3385
81 Ga0209675_1000016 3300025291 Bacteria 391965
82 Ga0209675_1000023 3300025291 Bacteria 312950
83 Ga0209675_1011957 3300025291 Bacteria 2832
84 Ga0209676_1000027 3300025292 Bacteria 560222
85 Ga0209676_1000037 3300025292 Bacteria 457562
86 Ga0209676_1000160 3300025292 Bacteria 161069
87 Ga0209676_1000280 3300025292 Bacteria 105988
88 Ga0209676_1000338 3300025292 Bacteria 89337
89 Ga0209676_1002509 3300025292 Bacteria 12849
90 Ga0209676_1005552 3300025292 Bacteria 6535
91 Ga0209676_1011641 3300025292 Bacteria 3527
92 Ga0209676_1017453 3300025292 Bacteria 2540
93 Ga0209025_1000013 3300025294 Bacteria 871757
94 Ga0209025_1000023 3300025294 Bacteria 541307
95 Ga0209025_1002654 3300025294 Bacteria 18290
96 Ga0209025_1003730 3300025294 Bacteria 13976
97 Ga0209025_1044222 3300025294 Bacteria 1865
98 Ga0209025_1072684 3300025294 Bacteria 1211
99 Ga0209564_1000066 3300025295 Bacteria 312899
100 Ga0209564_1000194 3300025295 Bacteria 141518
101 Ga0209564_1020519 3300025295 Bacteria 2415
102 Ga0209758_1000014 3300025297 Bacteria 871757
103 Ga0209758_1019968 3300025297 Bacteria 3197
104 Ga0209758_1025466 3300025297 Bacteria 2595
105 Ga0209050_1000352 3300025298 Bacteria 88558
106 Ga0209050_1000372 3300025298 Bacteria 85772
107 Ga0209050_1000714 3300025298 Bacteria 48752
108 Ga0209050_1000833 3300025298 Bacteria 42666
109 Ga0209050_1020359 3300025298 Bacteria 2472
110 Ga0209256_1000048 3300025299 Bacteria 312899
111 Ga0209256_1003154 3300025299 Bacteria 11970
112 Ga0209256_1005406 3300025299 Bacteria 7382
113 Ga0209256_1009125 3300025299 Bacteria 4415
114 Ga0209256_1009569 3300025299 Bacteria 4222
115 Ga0209051_1002836 3300025303 Bacteria 11944
116 Ga0209257_1000177 3300025304 Bacteria 161069
117 Ga0209257_1000198 3300025304 Bacteria 149013
118 Ga0209257_1000219 3300025304 Bacteria 135666
119 Ga0209257_1000383 3300025304 Bacteria 88315
120 Ga0209257_1003088 3300025304 Bacteria 14974
121 Ga0209257_1003813 3300025304 Bacteria 12380
122 Ga0209257_1005606 3300025304 Bacteria 8698
123 Ga0209257_1006405 3300025304 Bacteria 7602
124 Ga0209257_1007629 3300025304 Bacteria 6484
125 Ga0209257_1030649 3300025304 Bacteria 1732
126 Ga0207713_1000274 3300025735 Bacteria 62062
127 Ga0207645_10184635 3300025907 Bacteria 1369
128 Ga0207705_10118479 3300025909 Bacteria 1962
129 Ga0207657_10003190 3300025919 Bacteria 17543
130 Ga0207681_10127561 3300025923 Bacteria 1876
131 Ga0207650_10078302 3300025925 Bacteria 2501
132 Ga0207644_10220126 3300025931 Bacteria 1504
133 Ga0207709_10002407 3300025935 Bacteria 11766
134 Ga0207669_10041211 3300025937 Bacteria 2686
135 Ga0207679_10186402 3300025945 Bacteria 1721
136 Ga0207648_10160856 3300026089 Bacteria 1983
137 Ga0207676_10139378 3300026095 Bacteria 2074
138 Ga0207683_10518801 3300026121 Bacteria 1101
139 Ga0209371_1000007 3300027312 Bacteria 1050654
140 Ga0209371_1000043 3300027312 Bacteria 331009
141 Ga0209983_1002955 3300027665 Bacteria 3672
142 Ga0268266_10590929 3300028379 Bacteria 1066
143 Ga0268256_1000008 3300030500 Bacteria 1050654
144 Ga0268256_1000044 3300030500 Bacteria 330997
145 Ga0316176_1173125 3300030732 Bacteria 6223
146 Ga0316180_1056045 3300030736 Bacteria 1693
147 Ga0316183_1164133 3300030742 Bacteria 2254
148 Ga0307408_100005413 3300031548 Bacteria 8549
149 Ga0307408_100134886 3300031548 Bacteria 1930
150 Ga0307408_100367213 3300031548 Bacteria 1226
151 Ga0307405_10134325 3300031731 Bacteria 1715
152 Ga0307413_10001208 3300031824 Bacteria 9557
153 Ga0307410_10058414 3300031852 Bacteria 2630
154 Ga0307410_10185048 3300031852 Bacteria 1580
155 Ga0307406_10000978 3300031901 Bacteria 15942
156 Ga0307406_10135150 3300031901 Bacteria 1737
157 Ga0307412_10032514 3300031911 Bacteria 3307
158 Ga0307412_10224437 3300031911 Bacteria 1442
159 Ga0307412_10390119 3300031911 Bacteria 1130
160 Ga0307416_100108189 3300032002 Bacteria 2442
161 Ga0307414_10001338 3300032004 Bacteria 12742
162 Ga0307414_10001423 3300032004 Bacteria 12427
163 Ga0307414_10001693 3300032004 Bacteria 11474
164 Ga0307414_10008161 3300032004 Bacteria 5919
165 Ga0307414_10094329 3300032004 Bacteria 2233
166 Ga0307414_10157399 3300032004 Bacteria 1800
167 Ga0307414_10239951 3300032004 Bacteria 1500
168 Ga0307414_10291598 3300032004 Bacteria 1376
169 Ga0307414_10421324 3300032004 Bacteria 1164
170 Ga0307411_10041511 3300032005 Bacteria 2928
171 Ga0307411_10050660 3300032005 Bacteria 2705
172 Ga0307411_10282157 3300032005 Bacteria 1322
173 Ga0307411_10434541 3300032005 Bacteria 1094
174 Ga0395898_0244507 3300037466 Bacteria 1711
175 Ga0395905_0000337 3300037471 Bacteria 67116
176 Ga0395905_0067699 3300037471 Bacteria 3344
177 Ga0395905_0382188 3300037471 Bacteria 1302
178 Ga0395901_0016135 3300038443 Bacteria 7608
179 Ga0395901_0401645 3300038443 Bacteria 1408
180 Ga0439436_0003270 3300041404 Bacteria 4914
181 Ga0439436_0015471 3300041404 Bacteria 2295
182 Ga0439436_0017599 3300041404 Bacteria 2138
183 Ga0439439_0008009 3300041406 Bacteria 2483
184 Ga0439439_0023973 3300041406 Bacteria 1530
185 Ga0439447_002722 3300041407 Bacteria 6388
186 Ga0451791_0764960 3300041451 Bacteria 3731
187 Ga0451802_1024105 3300041460 Bacteria 1464
188 Ga0451837_0112426 3300041494 Bacteria 1227
189 Ga0439432_015112 3300042006 Bacteria 2608
190 Ga0439449_0003554 3300042007 Bacteria 6056
191 Ga0439449_0016153 3300042007 Bacteria 2807
192 Ga0439449_0046044 3300042007 Bacteria 1616
193 Ga0439452_015792 3300042010 Bacteria 2063
194 Ga0450905_009757 3300042142 Bacteria 1323
195 Ga0451577_0028854 3300042876 Bacteria 5018
196 Ga0495627_003480 3300046453 Bacteria 6932
197 Ga0495627_016710 3300046453 Bacteria 2507
198 Ga0495638_0002849 3300046460 Bacteria 13863
199 Ga0495638_0065734 3300046460 Bacteria 2231
200 Ga0495638_0101654 3300046460 Bacteria 1718
201 Ga0495606_0022545 3300046507 Bacteria 4584
202 Ga0495610_0006387 3300046512 Bacteria 8126
203 Ga0495616_0044201 3300046513 Bacteria 2260
204 Ga0495616_0096882 3300046513 Bacteria 1388
205 Ga0495631_0003900 3300046518 Bacteria 8065
206 Ga0495643_0002141 3300046522 Bacteria 16245
207 Ga0495663_0001222 3300046525 Bacteria 8226
208 Ga0495663_0001643 3300046525 Bacteria 6971
209 Ga0495621_0000021 3300046539 Bacteria 29166
210 Ga0495633_0003633 3300046558 Bacteria 10198
211 Ga0495633_0005589 3300046558 Bacteria 7630
212 Ga0495633_0049701 3300046558 Bacteria 1978
213 Ga0495633_0062932 3300046558 Bacteria 1737
214 Ga0495656_0005735 3300046615 Bacteria 4307
215 Ga0495656_0029296 3300046615 Bacteria 2215
216 Ga0495668_0000890 3300046616 Bacteria 33634
217 Ga0495625_0019584 3300046660 Bacteria 5243
218 Ga0495670_0110216 3300046691 Bacteria 1424
219 Ga0495660_0017448 3300046810 Bacteria 4133
220 Ga0495636_0005439 3300047318 Bacteria 5005
221 Ga0495636_0012437 3300047318 Bacteria 3369
222 Ga0495636_0031795 3300047318 Bacteria 2164
223 Ga0495672_0001225 3300047320 Bacteria 25853
224 Ga0495672_0030882 3300047320 Bacteria 3352
225 Ga0495685_011779 3300047447 Bacteria 2956
226 Ga0495681_0009759 3300047470 Bacteria 5878
227 Ga0495686_0004194 3300047472 Bacteria 11971
228 Ga0496100_0063315 3300048903 Bacteria 2444
229 Ga0496100_0255943 3300048903 Bacteria 1297
230 Ga0496105_0008031 3300048908 Bacteria 8198
231 Ga0496107_0188079 3300048910 Bacteria 1534
232 Ga0496108_0087148 3300048911 Bacteria 2651
233 Ga0496111_0126311 3300048914 Bacteria 1891
234 Ga0496113_0012701 3300048916 Bacteria 5669
235 Ga0496113_0021826 3300048916 Bacteria 4520
236 Ga0496114_0004048 3300048917 Bacteria 11322
237 Ga0496116_0006966 3300048919 Bacteria 10128
238 Ga0496116_0030117 3300048919 Bacteria 3904
239 Ga0496116_0055328 3300048919 Bacteria 2607
240 Ga0496117_0000822 3300048920 Bacteria 48105
241 Ga0496117_0004092 3300048920 Bacteria 16354
242 Ga0496117_0011779 3300048920 Bacteria 7792
243 Ga0496117_0012018 3300048920 Bacteria 7688
244 Ga0496117_0129537 3300048920 Bacteria 1532
245 Ga0496118_0002036 3300048921 Bacteria 28593
246 Ga0496118_0010895 3300048921 Bacteria 8942
247 Ga0496118_0011750 3300048921 Bacteria 8510
248 Ga0496118_0015604 3300048921 Bacteria 7020
249 Ga0496118_0015883 3300048921 Bacteria 6940
250 Ga0496118_0020960 3300048921 Bacteria 5775
251 Ga0496118_0031860 3300048921 Bacteria 4359
252 Ga0496118_0042360 3300048921 Bacteria 3593
253 Ga0496119_0000800 3300048922 Bacteria 42083
254 Ga0496119_0003558 3300048922 Bacteria 16083
255 Ga0496119_0021002 3300048922 Bacteria 4735
256 Ga0496120_0000970 3300048923 Bacteria 39064
257 Ga0496120_0002292 3300048923 Bacteria 19856
258 Ga0496120_0018155 3300048923 Bacteria 4541
259 Ga0496121_0000752 3300048924 Bacteria 59582
260 Ga0496121_0007074 3300048924 Bacteria 13624
261 Ga0496121_0017014 3300048924 Bacteria 7462
262 Ga0496121_0154354 3300048924 Bacteria 1686
263 Ga0496122_0000241 3300048925 Bacteria 122954
264 Ga0496122_0009282 3300048925 Bacteria 10401
265 Ga0496122_0011800 3300048925 Bacteria 8788
266 Ga0496122_0015847 3300048925 Bacteria 7178
267 Ga0496122_0016262 3300048925 Bacteria 7057
268 Ga0496122_0043742 3300048925 Bacteria 3505
269 Ga0496122_0067052 3300048925 Bacteria 2587
270 Ga0496122_0106672 3300048925 Bacteria 1853
271 Ga0496123_0000453 3300048926 Bacteria 72860
272 Ga0496123_0008951 3300048926 Bacteria 9101
273 Ga0496123_0012136 3300048926 Bacteria 7379
274 Ga0496123_0014987 3300048926 Bacteria 6389
275 Ga0496123_0016043 3300048926 Bacteria 6107
276 Ga0496123_0023619 3300048926 Bacteria 4701
277 Ga0496123_0044893 3300048926 Bacteria 3016
278 Ga0496124_0000218 3300048927 Bacteria 112156
279 Ga0496124_0000460 3300048927 Bacteria 70590
280 Ga0496124_0001341 3300048927 Bacteria 36941
281 Ga0496124_0006332 3300048927 Bacteria 12919
282 Ga0496124_0007149 3300048927 Bacteria 11948
283 Ga0496124_0008850 3300048927 Bacteria 10453
284 Ga0496124_0015016 3300048927 Bacteria 7454
285 Ga0496124_0027292 3300048927 Bacteria 5128
286 Ga0496124_0067083 3300048927 Bacteria 2986
287 Ga0496124_0068269 3300048927 Bacteria 2955
288 Ga0496124_0192688 3300048927 Bacteria 1558
289 Ga0496125_0005552 3300048928 Bacteria 13957
290 Ga0496125_0005750 3300048928 Bacteria 13642
291 Ga0496125_0006890 3300048928 Bacteria 12166
292 Ga0496125_0019525 3300048928 Bacteria 6387
293 Ga0496125_0025102 3300048928 Bacteria 5466
294 Ga0496125_0148072 3300048928 Bacteria 1618
295 Ga0496126_0005914 3300048929 Bacteria 13798
296 Ga0496126_0016976 3300048929 Bacteria 7262
297 Ga0496126_0025965 3300048929 Bacteria 5624
298 Ga0496126_0028022 3300048929 Bacteria 5372
299 Ga0496126_0082436 3300048929 Bacteria 2842
300 Ga0496126_0100214 3300048929 Bacteria 2536
301 Ga0501034_0001242 3300049571 Bacteria 34633
302 Ga0501034_0001478 3300049571 Bacteria 31052
303 Ga0501034_0008327 3300049571 Bacteria 10972
304 Ga0501038_0001241 3300049574 Bacteria 23114
305 Ga0501039_0274024 3300049575 Bacteria 1326
306 Ga0501043_0003861 3300049579 Bacteria 12315
307 Ga0501043_0030074 3300049579 Bacteria 4266
308 Ga0501047_0319801 3300049581 Bacteria 1392
309 Ga0501068_0166121 3300049584 Bacteria 1392
310 Ga0501070_0074488 3300049586 Bacteria 2810
311 Ga0501073_0135468 3300049589 Bacteria 1707
312 Ga0501202_019950 3300049652 Bacteria 1329
313 Ga0501080_0002129 3300049742 Bacteria 17199
314 Ga0501035_0133426 3300049822 Bacteria 2163
315 Ga0501035_0141993 3300049822 Bacteria 2087
316 Ga0501044_0037487 3300049823 Bacteria 5067
317 Ga0501044_0175301 3300049823 Bacteria 2113
318 nmdc:mga00v17_1287_c1 3300050491 Bacteria 13178
319 nmdc:mga00v17_31948_c1 3300050491 Bacteria 3108
320 nmdc:mga06z11_99568_c1 3300050494 Bacteria 1592
321 Ga0500634_0000022 3300053161 Bacteria 95424
322 2547503447 2547132130 Bacteria 4660562
323 2578457180 2576861471 Bacteria 4648976
324 2643905245 2643221579 Bacteria 4443405
325 2643914932 2643221581 Bacteria 3893603
326 2643938559 2643221586 Bacteria 4446529
327 2643973783 2643221593 Bacteria 6296053
328 2644077694 2643221612 Bacteria 4361984
329 2644528289 2643221695 Bacteria 3441323
330 2644661432 2643221720 Bacteria 4694283
331 2644693991 2643221727 Bacteria 4415595
332 2644699513 2643221728 Bacteria 4797149
333 2747950264 2747842428 Bacteria 4689383
334 2748019518 2747842501 Bacteria 5293829
335 2765580315 2765235840 Bacteria 4663337
336 2816518659 2816332141 Bacteria 4436036
337 2819661101 2818991457 Bacteria 5323295
338 2842395550 2842391507 Bacteria 4486072
339 2842759154 2842757796 Bacteria 3981385
340 2852652315 2852649853 Bacteria 4036942
341 2852686955 2852684882 Bacteria 5463342
342 2857445141 2857442823 Bacteria 4562550
343 2874222987 2874220319 Bacteria 4594709
344 2894414772 2894414249 Bacteria 4405451
345 2895499425 2895498888 Bacteria 5283788
346 2895512446 2895511927 Bacteria 6802080
347 2895522457 2895522137 Bacteria 3284416
348 2895525771 2895525241 Bacteria 3388457
349 2919092830 2919089067 Bacteria 4560942
350 2919131265 2919130084 Bacteria 5301837
351 2919137426 2919134579 Bacteria 4480386
352 2923517359 2923516293 Bacteria 3716336
353 2928499192 2928496128 Bacteria 4631123
354 2929196505 2929195423 Bacteria 5325372
355 2931383550 2931380184 Bacteria 4455911
356 2939589632 2939589442 Bacteria 4214238
357 2939624303 2939622612 Bacteria 4698046
358 2939630264 2939626828 Bacteria 4695272
359 2941478931 2941475908 Bacteria 4145589
360 2941493091 2941489479 Bacteria 6313767
361 2961049752 2961047084 Bacteria 4594415
362 2961066573 2961064222 Bacteria 4749990
363 2974307813 2974307012 Bacteria 4172388
364 2977248532 2977247770 Bacteria 4160543
365 2984516981 2984514374 Bacteria 4172479
366 2995953166 2995948881 Bacteria 6358104
367 8002871105 8002869464 Bacteria 3588529
368 8003016988 8003014200 Bacteria 4059994
369 8021626247 8021622325 Bacteria 4844743
370 8021627694 8021626552 Bacteria 4665214
371 8021651296 8021648035 Bacteria 4772378
372 Ga0496117_0058701
373 JGI25152J39213_1000069
374 JGI25150J39212_1000214
375 JGI25151J46595_10000105
376 JGI25151J46595_10000116
377 JGI25153J46596_10000077
378 rootL2_10108108
379 rootH1_10128132
380 rootH1_10234090
381 Ga0055526_1000126
382 Ga0055537_1000088
383 Ga0055537_1000812
384 Ga0055524_1000074
385 Ga0055536_1003391
386 Ga0055536_1003673
387 Ga0055536_1004152
388 Ga0055536_1023551
389 Ga0055534_1000097
390 Ga0055534_1000154
391 Ga0055528_1000028
392 Ga0055528_1002336
393 Ga0055530_10001279
394 Ga0055530_10001477
395 Ga0055530_10003319
396 Ga0055540_1013188
397 Ga0055531_10002804
398 Ga0055531_10005375
399 Ga0055531_10005379
400 Ga0055531_10005479
401 Ga0055531_10005799
402 Ga0055531_10007018
403 Ga0055531_10014255
404 Ga0058692_1000013
405 Ga0058692_1000035
406 Ga0065704_10075085
407 Ga0070670_100009586
408 Ga0070670_100010441
409 Ga0070660_100219282
410 Ga0070661_100114048
411 Ga0070669_100044168
412 Ga0070671_100321894
413 Ga0070674_100077178
414 Ga0070681_10141264
415 Ga0068867_100069180
416 Ga0070679_100044877
417 Ga0070672_100008578
418 Ga0070665_100372215
419 Ga0068864_100097994
420 Ga0081539_10025036
421 Ga0075364_10000775
422 Ga0075364_10031464
423 Ga0075364_10229276
424 Ga0105251_10000067
425 Ga0105032_100351
426 Ga0157318_1000277
427 Ga0157316_1000494
428 Ga0157371_10000184
429 Ga0157371_10145774
430 Ga0157370_10001564
431 Ga0157370_10028425
432 Ga0157370_10215800
433 Ga0157369_10058503
434 Ga0157372_10026650
435 Ga0157372_10376677
436 Ga0157375_10642466
437 Ga0182008_10003101
438 Ga0182006_1039019
439 Ga0182005_1000213
440 Ga0182005_1001924
441 Ga0183360_10001
442 Ga0163161_10004793
443 Ga0163161_10169756
444 Ga0207425_1000045
445 Ga0209129_1000057
446 Ga0209565_1000023
447 Ga0209565_1000034
448 Ga0209565_1003614
449 Ga0209673_1000039
450 Ga0209673_1000047
451 Ga0209130_1007429
452 Ga0209675_1000016
453 Ga0209675_1000023
454 Ga0209675_1011957
455 Ga0209676_1000027
456 Ga0209676_1000037
457 Ga0209676_1000160
458 Ga0209676_1000280
459 Ga0209676_1000338
460 Ga0209676_1002509
461 Ga0209676_1005552
462 Ga0209676_1011641
463 Ga0209676_1017453
464 Ga0209025_1000013
465 Ga0209025_1000023
466 Ga0209025_1002654
467 Ga0209025_1003730
468 Ga0209025_1044222
469 Ga0209025_1072684
470 Ga0209564_1000066
471 Ga0209564_1000194
472 Ga0209564_1020519
473 Ga0209758_1000014
474 Ga0209758_1019968
475 Ga0209758_1025466
476 Ga0209050_1000352
477 Ga0209050_1000372
478 Ga0209050_1000714
479 Ga0209050_1000833
480 Ga0209050_1020359
481 Ga0209256_1000048
482 Ga0209256_1003154
483 Ga0209256_1005406
484 Ga0209256_1009125
485 Ga0209256_1009569
486 Ga0209051_1002836
487 Ga0209257_1000177
488 Ga0209257_1000198
489 Ga0209257_1000219
490 Ga0209257_1000383
491 Ga0209257_1003088
492 Ga0209257_1003813
493 Ga0209257_1005606
494 Ga0209257_1006405
495 Ga0209257_1007629
496 Ga0209257_1030649
497 Ga0207713_1000274
498 Ga0207645_10184635
499 Ga0207705_10118479
500 Ga0207657_10003190
501 Ga0207681_10127561
502 Ga0207650_10078302
503 Ga0207644_10220126
504 Ga0207709_10002407
505 Ga0207669_10041211
506 Ga0207679_10186402
507 Ga0207648_10160856
508 Ga0207676_10139378
509 Ga0207683_10518801
510 Ga0209371_1000007
511 Ga0209371_1000043
512 Ga0209983_1002955
513 Ga0268266_10590929
514 Ga0268256_1000008
515 Ga0268256_1000044
516 Ga0316176_1173125
517 Ga0316180_1056045
518 Ga0316183_1164133
519 Ga0307408_100005413
520 Ga0307408_100134886
521 Ga0307408_100367213
522 Ga0307405_10134325
523 Ga0307413_10001208
524 Ga0307410_10058414
525 Ga0307410_10185048
526 Ga0307406_10000978
527 Ga0307406_10135150
528 Ga0307412_10032514
529 Ga0307412_10224437
530 Ga0307412_10390119
531 Ga0307416_100108189
532 Ga0307414_10001338
533 Ga0307414_10001423
534 Ga0307414_10001693
535 Ga0307414_10008161
536 Ga0307414_10094329
537 Ga0307414_10157399
538 Ga0307414_10239951
539 Ga0307414_10291598
540 Ga0307414_10421324
541 Ga0307411_10041511
542 Ga0307411_10050660
543 Ga0307411_10282157
544 Ga0307411_10434541
545 Ga0395898_0244507
546 Ga0395905_0000337
547 Ga0395905_0067699
548 Ga0395905_0382188
549 Ga0395901_0016135
550 Ga0395901_0401645
551 Ga0439436_0003270
552 Ga0439436_0015471
553 Ga0439436_0017599
554 Ga0439439_0008009
555 Ga0439439_0023973
556 Ga0439447_002722
557 Ga0451791_0764960
558 Ga0451802_1024105
559 Ga0451837_0112426
560 Ga0439432_015112
561 Ga0439449_0003554
562 Ga0439449_0016153
563 Ga0439449_0046044
564 Ga0439452_015792
565 Ga0450905_009757
566 Ga0451577_0028854
567 Ga0495627_003480
568 Ga0495627_016710
569 Ga0495638_0002849
570 Ga0495638_0065734
571 Ga0495638_0101654
572 Ga0495606_0022545
573 Ga0495610_0006387
574 Ga0495616_0044201
575 Ga0495616_0096882
576 Ga0495631_0003900
577 Ga0495643_0002141
578 Ga0495663_0001222
579 Ga0495663_0001643
580 Ga0495621_0000021
581 Ga0495633_0003633
582 Ga0495633_0005589
583 Ga0495633_0049701
584 Ga0495633_0062932
585 Ga0495656_0005735
586 Ga0495656_0029296
587 Ga0495668_0000890
588 Ga0495625_0019584
589 Ga0495670_0110216
590 Ga0495660_0017448
591 Ga0495636_0005439
592 Ga0495636_0012437
593 Ga0495636_0031795
594 Ga0495672_0001225
595 Ga0495672_0030882
596 Ga0495685_011779
597 Ga0495681_0009759
598 Ga0495686_0004194
599 Ga0496100_0063315
600 Ga0496100_0255943
601 Ga0496105_0008031
602 Ga0496107_0188079
603 Ga0496108_0087148
604 Ga0496111_0126311
605 Ga0496113_0012701
606 Ga0496113_0021826
607 Ga0496114_0004048
608 Ga0496116_0006966
609 Ga0496116_0030117
610 Ga0496116_0055328
611 Ga0496117_0000822
612 Ga0496117_0004092
613 Ga0496117_0011779
614 Ga0496117_0012018
615 Ga0496117_0129537
616 Ga0496118_0002036
617 Ga0496118_0010895
618 Ga0496118_0011750
619 Ga0496118_0015604
620 Ga0496118_0015883
621 Ga0496118_0020960
622 Ga0496118_0031860
623 Ga0496118_0042360
624 Ga0496119_0000800
625 Ga0496119_0003558
626 Ga0496119_0021002
627 Ga0496120_0000970
628 Ga0496120_0002292
629 Ga0496120_0018155
630 Ga0496121_0000752
631 Ga0496121_0007074
632 Ga0496121_0017014
633 Ga0496121_0154354
634 Ga0496122_0000241
635 Ga0496122_0009282
636 Ga0496122_0011800
637 Ga0496122_0015847
638 Ga0496122_0016262
639 Ga0496122_0043742
640 Ga0496122_0067052
641 Ga0496122_0106672
642 Ga0496123_0000453
643 Ga0496123_0008951
644 Ga0496123_0012136
645 Ga0496123_0014987
646 Ga0496123_0016043
647 Ga0496123_0023619
648 Ga0496123_0044893
649 Ga0496124_0000218
650 Ga0496124_0000460
651 Ga0496124_0001341
652 Ga0496124_0006332
653 Ga0496124_0007149
654 Ga0496124_0008850
655 Ga0496124_0015016
656 Ga0496124_0027292
657 Ga0496124_0067083
658 Ga0496124_0068269
659 Ga0496124_0192688
660 Ga0496125_0005552
661 Ga0496125_0005750
662 Ga0496125_0006890
663 Ga0496125_0019525
664 Ga0496125_0025102
665 Ga0496125_0148072
666 Ga0496126_0005914
667 Ga0496126_0016976
668 Ga0496126_0025965
669 Ga0496126_0028022
670 Ga0496126_0082436
671 Ga0496126_0100214
672 Ga0501034_0001242
673 Ga0501034_0001478
674 Ga0501034_0008327
675 Ga0501038_0001241
676 Ga0501039_0274024
677 Ga0501043_0003861
678 Ga0501043_0030074
679 Ga0501047_0319801
680 Ga0501068_0166121
681 Ga0501070_0074488
682 Ga0501073_0135468
683 Ga0501202_019950
684 Ga0501080_0002129
685 Ga0501035_0133426
686 Ga0501035_0141993
687 Ga0501044_0037487
688 Ga0501044_0175301
689 nmdc:mga00v17_1287_c1
690 nmdc:mga00v17_31948_c1
691 nmdc:mga06z11_99568_c1
692 Ga0500634_0000022
693 2547503447
694 2578457180
695 2643905245
696 2643914932
697 2643938559
698 2643973783
699 2644077694
700 2644528289
701 2644661432
702 2644693991
703 2644699513
704 2747950264
705 2748019518
706 2765580315
707 2816518659
708 2819661101
709 2842395550
710 2842759154
711 2852652315
712 2852686955
713 2857445141
714 2874222987
715 2894414772
716 2895499425
717 2895512446
718 2895522457
719 2895525771
720 2919092830
721 2919131265
722 2919137426
723 2923517359
724 2928499192
725 2929196505
726 2931383550
727 2939589632
728 2939624303
729 2939630264
730 2941478931
731 2941493091
732 2961049752
733 2961066573
734 2974307813
735 2977248532
736 2984516981
737 2995953166
738 8002871105
739 8003016988
740 8021626247
741 8021627694
742 8021651296

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01882

DUF58

Protein of unknown function DUF58

68

153

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fzv-assembly1.cif.gz_A the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, ala-ala linker variant, expressed with sumo tag 0.6828 78 219
8fzu-assembly2.cif.gz_B the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, thr-val linker variant, expressed with sumo tag 0.6792 85 219
5oqm-assembly1.cif.gz_6 structure of yeast transcription pre-initiation complex with tfiih and core mediator 0.6751 85 219
8ft6-assembly1.cif.gz_A the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, ala-ala linker variant, sumo tag-free preparation. 0.6646 78 219
7z6o-assembly1.cif.gz_A x-ray studies of ku70/80 reveal the binding site for ip6 0.6531 83 221
ID Description Score Start End Superfamily
af_O69661_282_440_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.7212 143 281 3.40.50.410
af_P9WLX5_142_317_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.717 137 288 3.40.50.410
af_Q58221_269_439_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.6892 82 218 3.40.50.410
af_Q54ES2_261_409_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.6882 85 217 3.40.50.410
af_A0A1D6ENA4_216_498_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.6747 201 283 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A836P479-F1-model_v4 ATPase 0.9565 81 288
AF-A0A427BW76-F1-model_v4 DUF58 domain-containing protein 0.9172 131 290
AF-A0A836P479-F1-model_v4 ATPase 0.9134 81 288
AF-A0A427BW76-F1-model_v4 DUF58 domain-containing protein 0.8703 131 290
AF-A0A853JIE9-F1-model_v4 DUF58 domain-containing protein 0.8183 8 288

Map