F426541

General Info

Members Datasets Scaffolds Average Seq Length
373 240 746 704

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221695|2644528133
Length 749
Sequence TDPAVSSDGRYGARLSFQLPTAIAHRHSGPHSMTTFRSLLATLFTSTLLMTTSLSIDTAHAADLPQPPDAAKKPHAVKAPHGATRNDDYYWLRDDTRKNPQMLAYLNAENAYADAVMKPLRPRQDQIYQEIVARIKQDDSSVPFRERGYWYYTRFETGKDYPIHARRKDLMTAPEEVLLDVNTMAEGKEYFSVGDYEVSQDNQVMAWAEDDVGRRQYTIRFRNLVTGDVYDDVVKGVSPNLVWADDNRTLFYVENDPETLLTVRVKKHVLGTPASQDELVYEEHDDSFYMGVSRTRDDQYICIGVSSTVSDEMRCAPAANPVDFAVLAPRERDVEYDADHHGGRWVIRTNAPDANGTPAKNFKIVTAPTGSTSRKDWKDWIAARDDVYIDGFELFDTFTAIAERSEGLERVRVLKPDGASEFVKADEPAYSMGLAVNAEPDTEWLRYSYTSMTTPNTTYELNTKTGERKLLKQDPVPGYDASLYVTERLWATARDGTKIPVSLVYKKGFRKDGTAALLQYGYGSYGASMDPGFNNGVVSLLDRGMVYAIAHIRGGEEMGRAWYENGKLFKKQNTFTDFIDVTDFLVKEGYAAKDRVAAHGGSAGGLLMGAISNMAPDRYHVILTEVPFVDVVTTMLDPSIPLTTNEYDEWGNPEKKEYYDYMLSYSPYDNLKAQAYPAMFVGTGLWDSQVQYYEPAKYVAKLRDVDTSGHTVIFRTNMDAGHGGKSGRFRRHKERAEMYAFMLDQLGVK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
10 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
17 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
47 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
48 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
49 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
50 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
53 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
54 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
55 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
83 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
84 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
85 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
86 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
104 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
105 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
108 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
109 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
110 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
111 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
112 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
113 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
124 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
125 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
126 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
129 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
130 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
131 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
144 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
159 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
163 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
164 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
165 2643221695 Lysobacter sp. Root494 Isolate Unclassified
166 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
167 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
168 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
169 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
170 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
171 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
172 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
173 2643221559 Lysobacter sp. Root559 Isolate Unclassified
174 2643221573 Lysobacter sp. Root604 Isolate Unclassified
175 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
176 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
177 2643221586 Lysobacter sp. Root667 Isolate Unclassified
178 2643221593 Lysobacter sp. Root690 Isolate Unclassified
179 2643221612 Lysobacter sp. Root76 Isolate Unclassified
180 2643221720 Lysobacter sp. Root916 Isolate Unclassified
181 2643221727 Lysobacter sp. Root96 Isolate Unclassified
182 2643221728 Lysobacter sp. Root983 Isolate Unclassified
183 2738541302 Pedobacter sp. CF074 Isolate Unclassified
184 2739367651 Pedobacter sp. OK291 Isolate Unclassified
185 2739367656 Pedobacter sp. CF523 Isolate Unclassified
186 2739367663 Pedobacter sp. YR510 Isolate Unclassified
187 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
188 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
189 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
190 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
191 2818991437 Pedobacter terrae 518 Isolate Unclassified
192 2818991457 Xanthomonas translucens 569 Isolate Unclassified
193 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
194 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
195 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
196 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
197 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
198 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
199 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
200 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
201 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
202 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
203 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
204 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
205 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
206 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
207 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
208 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
209 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
210 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
211 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
212 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
213 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
214 2919513703 Luteimonas sp. 3794 Isolate Unclassified
215 2919675420 Luteimonas terrae 4099 Isolate Unclassified
216 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
217 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
218 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
219 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
220 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
221 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
222 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
223 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
224 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
225 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
226 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
227 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
228 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
229 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
230 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
231 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
232 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
233 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
234 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
235 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
236 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
237 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
238 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
239 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
240 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.62
Metatranscriptomes 0
Isolates 20.38

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 24.4
Nodule 0.27
Rhizoplane 3.22
Rhizosphere 48.53
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_429265 2162886007 Bacteria 2534
2 JGI25152J39213_1000028 3300002773 Bacteria 100367
3 JGI25152J39213_1000659 3300002773 Bacteria 18044
4 JGI25150J39212_1000006 3300002774 Bacteria 257228
5 JGI25150J39212_1000347 3300002774 Bacteria 22719
6 JGI25151J46595_10000024 3300003187 Bacteria 217596
7 JGI25151J46595_10000160 3300003187 Bacteria 86811
8 JGI25151J46595_10001250 3300003187 Bacteria 18044
9 JGI25153J46596_10000026 3300003215 Bacteria 217245
10 JGI25153J46596_10000903 3300003215 Bacteria 18044
11 rootH2_10018091 3300003320 Bacteria 7755
12 rootH1_10071290 3300003323 Bacteria 4295
13 Ga0055526_1000014 3300003771 Bacteria 233327
14 Ga0055526_1002302 3300003771 Bacteria 13032
15 Ga0055537_1000059 3300003773 Bacteria 79628
16 Ga0055537_1000403 3300003773 Bacteria 28853
17 Ga0055524_1000019 3300003775 Bacteria 233561
18 Ga0055524_1004153 3300003775 Bacteria 6770
19 Ga0055536_1000002 3300003781 Bacteria 605605
20 Ga0055536_1003020 3300003781 Bacteria 9209
21 Ga0055536_1005331 3300003781 Bacteria 6317
22 Ga0055536_1008710 3300003781 Bacteria 4312
23 Ga0055536_1009563 3300003781 Bacteria 3987
24 Ga0055536_1010355 3300003781 Bacteria 3714
25 Ga0055534_1000012 3300003784 Bacteria 153530
26 Ga0055534_1000112 3300003784 Bacteria 59920
27 Ga0055528_1000007 3300003790 Bacteria 233327
28 Ga0055528_1000305 3300003790 Bacteria 41733
29 Ga0055530_10001409 3300003791 Bacteria 17679
30 Ga0055530_10001757 3300003791 Bacteria 15137
31 Ga0055530_10001876 3300003791 Bacteria 14446
32 Ga0055531_10000148 3300003794 Bacteria 80963
33 Ga0055531_10001072 3300003794 Bacteria 21490
34 Ga0055531_10004948 3300003794 Bacteria 7921
35 Ga0055531_10008190 3300003794 Bacteria 5564
36 Ga0055531_10011518 3300003794 Bacteria 4252
37 Ga0055531_10013716 3300003794 Bacteria 3714
38 Ga0055531_10016800 3300003794 Bacteria 3132
39 Ga0058692_1000053 3300003856 Bacteria 107166
40 Ga0058692_1000370 3300003856 Bacteria 21615
41 Ga0065714_10064473 3300005288 Bacteria 60352
42 Ga0065704_10073162 3300005289 Bacteria 7512
43 Ga0065704_10090217 3300005289 Bacteria 2803
44 Ga0065704_10094056 3300005289 Bacteria 2563
45 Ga0070670_100004111 3300005331 Bacteria 12160
46 Ga0070668_100002795 3300005347 Bacteria 12838
47 Ga0070671_100038281 3300005355 Bacteria 3980
48 Ga0070674_100037964 3300005356 Bacteria 3243
49 Ga0070714_100014892 3300005435 Bacteria 6251
50 Ga0070701_10000428 3300005438 Bacteria 14339
51 Ga0070698_100057546 3300005471 Bacteria 3934
52 Ga0070699_100002718 3300005518 Bacteria 15769
53 Ga0068853_100100673 3300005539 Bacteria 2555
54 Ga0070665_100051349 3300005548 Bacteria 4135
55 Ga0068859_100000872 3300005617 Bacteria 30780
56 Ga0075364_10000199 3300006051 Bacteria 27820
57 Ga0075428_100054287 3300006844 Unclassified 4392
58 Ga0075428_100092185 3300006844 Unclassified 3303
59 Ga0097620_100000872 3300006931 Bacteria 30780
60 Ga0105251_10000155 3300009011 Bacteria 69872
61 Ga0105251_10004748 3300009011 Bacteria 9103
62 Ga0111539_10014064 3300009094 Bacteria 10002
63 Ga0111539_10020298 3300009094 Bacteria 8185
64 Ga0114129_10001958 3300009147 Bacteria 28176
65 Ga0105243_10001863 3300009148 Bacteria 18001
66 Ga0105243_10008431 3300009148 Bacteria 7913
67 Ga0105243_10040322 3300009148 Bacteria 3646
68 Ga0105248_10096843 3300009177 Bacteria 3324
69 Ga0157371_10000224 3300013102 Bacteria 82657
70 Ga0157371_10002212 3300013102 Bacteria 18831
71 Ga0157371_10022007 3300013102 Bacteria 4679
72 Ga0157370_10002047 3300013104 Bacteria 24775
73 Ga0157370_10050615 3300013104 Bacteria 3970
74 Ga0157370_10088995 3300013104 Bacteria 2900
75 Ga0157369_10000158 3300013105 Bacteria 96395
76 Ga0157369_10019609 3300013105 Bacteria 7567
77 Ga0157378_10006542 3300013297 Bacteria 10186
78 Ga0163162_10000011 3300013306 Bacteria 299877
79 Ga0157372_10135184 3300013307 Bacteria 2839
80 Ga0163163_10017692 3300014325 Bacteria 6655
81 Ga0182008_10000046 3300014497 Bacteria 111777
82 Ga0182008_10000204 3300014497 Bacteria 46716
83 Ga0182006_1000015 3300015261 Bacteria 325938
84 Ga0182006_1000241 3300015261 Bacteria 51244
85 Ga0182006_1000397 3300015261 Bacteria 35456
86 Ga0182006_1004449 3300015261 Bacteria 6911
87 Ga0182007_10000008 3300015262 Bacteria 332953
88 Ga0182007_10000131 3300015262 Bacteria 52730
89 Ga0182005_1000437 3300015265 Bacteria 22152
90 Ga0183373_1002 3300015682 Bacteria 990153
91 Ga0183360_10002 3300015689 Bacteria 953821
92 Ga0163161_10000570 3300017792 Bacteria 29671
93 Ga0163161_10000650 3300017792 Bacteria 27726
94 Ga0163161_10023656 3300017792 Bacteria 4336
95 Ga0207425_1000003 3300025245 Bacteria 1145342
96 Ga0207425_1000064 3300025245 Bacteria 129075
97 Ga0209759_1006735 3300025256 Bacteria 3811
98 Ga0209129_1000022 3300025258 Bacteria 440876
99 Ga0209129_1000101 3300025258 Bacteria 161931
100 Ga0209565_1000001 3300025263 Bacteria 2950419
101 Ga0209565_1000060 3300025263 Bacteria 188543
102 Ga0209673_1000001 3300025273 Bacteria 3176258
103 Ga0209673_1000047 3300025273 Bacteria 289276
104 Ga0209675_1000001 3300025291 Bacteria 2950293
105 Ga0209675_1000007 3300025291 Bacteria 683430
106 Ga0209675_1010157 3300025291 Bacteria 3242
107 Ga0209676_1000018 3300025292 Bacteria 631385
108 Ga0209676_1000022 3300025292 Bacteria 605659
109 Ga0209676_1000052 3300025292 Bacteria 371539
110 Ga0209676_1000501 3300025292 Bacteria 62489
111 Ga0209676_1000507 3300025292 Bacteria 61441
112 Ga0209676_1000620 3300025292 Bacteria 51683
113 Ga0209676_1002422 3300025292 Bacteria 13292
114 Ga0209676_1003943 3300025292 Bacteria 8586
115 Ga0209676_1009641 3300025292 Bacteria 4138
116 Ga0209025_1000006 3300025294 Bacteria 1153444
117 Ga0209025_1000007 3300025294 Bacteria 1145109
118 Ga0209025_1000048 3300025294 Bacteria 335574
119 Ga0209025_1001559 3300025294 Bacteria 29104
120 Ga0209025_1013181 3300025294 Bacteria 5219
121 Ga0209564_1000001 3300025295 Bacteria 3176258
122 Ga0209564_1001294 3300025295 Bacteria 27156
123 Ga0209758_1000012 3300025297 Bacteria 949866
124 Ga0209758_1000056 3300025297 Bacteria 335574
125 Ga0209758_1015962 3300025297 Bacteria 3846
126 Ga0209050_1000020 3300025298 Bacteria 605671
127 Ga0209050_1000740 3300025298 Bacteria 47372
128 Ga0209050_1000870 3300025298 Bacteria 40796
129 Ga0209050_1002028 3300025298 Bacteria 18769
130 Ga0209050_1015559 3300025298 Bacteria 3182
131 Ga0209256_1000006 3300025299 Bacteria 1250310
132 Ga0209256_1001986 3300025299 Bacteria 18396
133 Ga0209256_1002865 3300025299 Bacteria 13112
134 Ga0209256_1011260 3300025299 Bacteria 3604
135 Ga0209051_1004844 3300025303 Bacteria 8094
136 Ga0209257_1000006 3300025304 Bacteria 1570111
137 Ga0209257_1000035 3300025304 Bacteria 631463
138 Ga0209257_1000046 3300025304 Bacteria 477765
139 Ga0209257_1000067 3300025304 Bacteria 342468
140 Ga0209257_1000414 3300025304 Bacteria 82489
141 Ga0209257_1001111 3300025304 Bacteria 34963
142 Ga0209257_1001426 3300025304 Bacteria 28374
143 Ga0209257_1002275 3300025304 Bacteria 19574
144 Ga0209257_1002563 3300025304 Bacteria 17724
145 Ga0209257_1004911 3300025304 Bacteria 9852
146 Ga0209257_1005671 3300025304 Bacteria 8608
147 Ga0207713_1016068 3300025735 Bacteria 3813
148 Ga0207647_10019957 3300025904 Bacteria 4499
149 Ga0207695_10056902 3300025913 Bacteria 4066
150 Ga0207657_10075615 3300025919 Bacteria 2842
151 Ga0207681_10002164 3300025923 Bacteria 12520
152 Ga0207650_10002717 3300025925 Bacteria 12212
153 Ga0207644_10010660 3300025931 Bacteria 6060
154 Ga0207690_10015911 3300025932 Bacteria 4569
155 Ga0207709_10000732 3300025935 Bacteria 26258
156 Ga0207709_10010350 3300025935 Bacteria 5136
157 Ga0207712_10008303 3300025961 Bacteria 6565
158 Ga0207668_10023445 3300025972 Bacteria 3967
159 Ga0207648_10067202 3300026089 Bacteria 3126
160 Ga0209371_1000018 3300027312 Bacteria 614700
161 Ga0209371_1000025 3300027312 Bacteria 450640
162 Ga0209983_1001342 3300027665 Bacteria 5482
163 Ga0209974_10013942 3300027876 Bacteria 2678
164 Ga0268266_10040837 3300028379 Bacteria 3955
165 Ga0268266_10063405 3300028379 Bacteria 3190
166 Ga0265336_10000028 3300028666 Bacteria 179201
167 Ga0268256_1000016 3300030500 Bacteria 614700
168 Ga0268256_1000027 3300030500 Bacteria 450640
169 Ga0307511_10065208 3300030521 Bacteria 2729
170 Ga0316177_1165294 3300030731 Bacteria 10662
171 Ga0316178_1110608 3300030735 Bacteria 3718
172 Ga0265339_10000557 3300031249 Bacteria 29155
173 Ga0265327_10000013 3300031251 Bacteria 519549
174 Ga0265316_10005975 3300031344 Bacteria 11715
175 Ga0265316_10018937 3300031344 Bacteria 5907
176 Ga0307513_10011438 3300031456 Bacteria 11031
177 Ga0307408_100007170 3300031548 Bacteria 7384
178 Ga0307408_100032215 3300031548 Bacteria 3654
179 Ga0265342_10005364 3300031712 Bacteria 9794
180 Ga0307405_10000014 3300031731 Bacteria 226733
181 Ga0307413_10018975 3300031824 Bacteria 3622
182 Ga0307410_10011503 3300031852 Bacteria 5066
183 Ga0307406_10002156 3300031901 Bacteria 10715
184 Ga0307406_10033347 3300031901 Bacteria 3151
185 Ga0307407_10000002 3300031903 Bacteria 323084
186 Ga0307407_10013824 3300031903 Bacteria 3932
187 Ga0307412_10000019 3300031911 Bacteria 266611
188 Ga0307416_100000004 3300032002 Bacteria 505535
189 Ga0307416_100000005 3300032002 Bacteria 477728
190 Ga0307416_100045083 3300032002 Bacteria 3469
191 Ga0307414_10000599 3300032004 Bacteria 18579
192 Ga0307414_10001239 3300032004 Bacteria 13148
193 Ga0307414_10016050 3300032004 Bacteria 4540
194 Ga0307414_10026764 3300032004 Bacteria 3716
195 Ga0395905_0021631 3300037471 Bacteria 6083
196 Ga0395901_0107213 3300038443 Bacteria 2932
197 Ga0237819_00128 3300038705 Bacteria 28583
198 Ga0237816_00230 3300039145 Bacteria 4664
199 Ga0436360_0192922 3300039438 Bacteria 4243
200 Ga0439465_0005663 3300041413 Bacteria 3976
201 Ga0451804_1047301 3300041463 Bacteria 2328
202 Ga0451807_1312642 3300041486 Bacteria 6569
203 Ga0451843_0142842 3300041509 Bacteria 4611
204 Ga0439433_0010797 3300041999 Bacteria 1997
205 Ga0439432_002165 3300042006 Bacteria 7416
206 Ga0439449_0001576 3300042007 Bacteria 8944
207 Ga0439449_0011435 3300042007 Bacteria 3340
208 Ga0439449_0014049 3300042007 Bacteria 3011
209 Ga0450889_000007 3300042144 Bacteria 18930
210 Ga0451577_0019306 3300042876 Bacteria 6269
211 Ga0451577_0077531 3300042876 Bacteria 2963
212 Ga0453683_0047266 3300044673 Bacteria 2698
213 Ga0453684_0002785 3300044712 Bacteria 41355
214 Ga0451576_0001398 3300045051 Bacteria 41476
215 Ga0451576_0030581 3300045051 Bacteria 5754
216 Ga0495638_0000744 3300046460 Bacteria 34935
217 Ga0495650_0021230 3300046471 Bacteria 3145
218 Ga0495596_0001507 3300046500 Bacteria 13324
219 Ga0495606_0044349 3300046507 Bacteria 2958
220 Ga0495610_0000001 3300046512 Bacteria 1620061
221 Ga0495610_0000204 3300046512 Bacteria 65887
222 Ga0495610_0000279 3300046512 Bacteria 53150
223 Ga0495610_0018928 3300046512 Bacteria 3870
224 Ga0495616_0014458 3300046513 Bacteria 4417
225 Ga0495631_0000804 3300046518 Bacteria 20024
226 Ga0495643_0000886 3300046522 Bacteria 31881
227 Ga0495598_0001236 3300046537 Bacteria 4967
228 Ga0495645_0110061 3300046543 Bacteria 1950
229 Ga0495656_0012878 3300046615 Bacteria 3098
230 Ga0495613_0052521 3300046689 Bacteria 3002
231 Ga0495671_0003312 3300046692 Bacteria 9956
232 Ga0495671_0023700 3300046692 Bacteria 3205
233 Ga0495672_0000411 3300047320 Bacteria 51888
234 Ga0496101_0115828 3300048904 Bacteria 2022
235 Ga0496102_0061887 3300048905 Bacteria 3427
236 Ga0496104_0017326 3300048907 Bacteria 6557
237 Ga0496104_0120428 3300048907 Bacteria 2519
238 Ga0496105_0000903 3300048908 Bacteria 20254
239 Ga0496107_0056827 3300048910 Bacteria 2828
240 Ga0496113_0010796 3300048916 Bacteria 6058
241 Ga0496114_0001623 3300048917 Bacteria 17089
242 Ga0496114_0010572 3300048917 Bacteria 7343
243 Ga0496115_0006217 3300048918 Bacteria 8735
244 Ga0496116_0026926 3300048919 Bacteria 4193
245 Ga0496117_0001004 3300048920 Bacteria 43156
246 Ga0496117_0001505 3300048920 Bacteria 33389
247 Ga0496117_0009080 3300048920 Bacteria 9342
248 Ga0496117_0015676 3300048920 Bacteria 6439
249 Ga0496118_0000787 3300048921 Bacteria 50784
250 Ga0496118_0000945 3300048921 Bacteria 45446
251 Ga0496118_0009317 3300048921 Bacteria 9951
252 Ga0496119_0000518 3300048922 Bacteria 52520
253 Ga0496119_0000719 3300048922 Bacteria 44523
254 Ga0496120_0000630 3300048923 Bacteria 52559
255 Ga0496120_0001627 3300048923 Bacteria 26035
256 Ga0496121_0001866 3300048924 Bacteria 33822
257 Ga0496121_0017870 3300048924 Bacteria 7198
258 Ga0496122_0000791 3300048925 Bacteria 60779
259 Ga0496122_0001011 3300048925 Bacteria 49773
260 Ga0496122_0014322 3300048925 Bacteria 7678
261 Ga0496122_0015347 3300048925 Bacteria 7329
262 Ga0496122_0027786 3300048925 Bacteria 4824
263 Ga0496123_0000658 3300048926 Bacteria 57055
264 Ga0496123_0001830 3300048926 Bacteria 27941
265 Ga0496123_0023775 3300048926 Bacteria 4681
266 Ga0496123_0027968 3300048926 Bacteria 4184
267 Ga0496124_0000034 3300048927 Bacteria 325332
268 Ga0496124_0000219 3300048927 Bacteria 111562
269 Ga0496124_0007115 3300048927 Bacteria 11980
270 Ga0496124_0010021 3300048927 Bacteria 9670
271 Ga0496124_0014907 3300048927 Bacteria 7486
272 Ga0496124_0024251 3300048927 Bacteria 5521
273 Ga0496124_0058819 3300048927 Bacteria 3231
274 Ga0496124_0074029 3300048927 Bacteria 2816
275 Ga0496125_0013956 3300048928 Bacteria 7857
276 Ga0496126_0001265 3300048929 Bacteria 40729
277 Ga0496126_0003926 3300048929 Bacteria 18218
278 Ga0496126_0024439 3300048929 Bacteria 5835
279 Ga0496126_0030233 3300048929 Bacteria 5134
280 Ga0496126_0096155 3300048929 Bacteria 2597
281 Ga0501033_0001118 3300049570 Bacteria 24355
282 Ga0501034_0001210 3300049571 Bacteria 35418
283 Ga0501034_0002264 3300049571 Bacteria 23614
284 Ga0501034_0003371 3300049571 Bacteria 18236
285 Ga0501036_0026767 3300049572 Bacteria 4872
286 Ga0501038_0006615 3300049574 Bacteria 10719
287 Ga0501038_0046842 3300049574 Bacteria 3747
288 Ga0501047_0103679 3300049581 Bacteria 2725
289 Ga0501068_0037605 3300049584 Bacteria 2897
290 Ga0501070_0063611 3300049586 Bacteria 3056
291 Ga0501265_000651 3300049762 Bacteria 3766
292 Ga0501275_000085 3300049772 Bacteria 9473
293 Ga0501044_0026228 3300049823 Bacteria 6170
294 nmdc:mga00v17_574_c1 3300050491 Bacteria 20546
295 Ga0500635_0000036 3300053080 Bacteria 94740
296 Ga0500641_0016760 3300053096 Bacteria 2731
297 Ga0500562_000837 3300053108 Bacteria 7450
298 2644528133 2643221695 Bacteria 3441323
299 2547501623 2547132130 Bacteria 4660562
300 2572254272 2571042365 Bacteria 3289345
301 2578456932 2576861471 Bacteria 4648976
302 2586207112 2585427687 Bacteria 5544917
303 2587745677 2585428060 Bacteria 5304711
304 2588445537 2588253712 Bacteria 5403181
305 2590611146 2588254257 Bacteria 5436094
306 2643818221 2643221559 Bacteria 4424915
307 2643880409 2643221573 Bacteria 4784121
308 2643906670 2643221579 Bacteria 4443405
309 2643913830 2643221581 Bacteria 3893603
310 2643937890 2643221586 Bacteria 4446529
311 2643973441 2643221593 Bacteria 6296053
312 2644078799 2643221612 Bacteria 4361984
313 2644660984 2643221720 Bacteria 4694283
314 2644693576 2643221727 Bacteria 4415595
315 2644699066 2643221728 Bacteria 4797149
316 2738852694 2738541302 Bacteria 5944758
317 2739586616 2739367651 Bacteria 6359826
318 2739614966 2739367656 Bacteria 5152243
319 2739645915 2739367663 Bacteria 5040914
320 2747948653 2747842428 Bacteria 4689383
321 2748018768 2747842501 Bacteria 5293829
322 2765580573 2765235840 Bacteria 4663337
323 2816518404 2816332141 Bacteria 4436036
324 2819547061 2818991437 Bacteria 5805520
325 2819661370 2818991457 Bacteria 5323295
326 2842394487 2842391507 Bacteria 4486072
327 2842727197 2842722452 Bacteria 6263924
328 2842758945 2842757796 Bacteria 3981385
329 2842781931 2842780639 Bacteria 4337790
330 2842910801 2842909656 Bacteria 6185908
331 2849284017 2849281842 Bacteria 6065644
332 2852652086 2852649853 Bacteria 4036942
333 2852687241 2852684882 Bacteria 5463342
334 2857444228 2857442823 Bacteria 4562550
335 2857628101 2857627736 Bacteria 5625397
336 2874223240 2874220319 Bacteria 4594709
337 2883071211 2883068021 Bacteria 6192739
338 2894414317 2894414249 Bacteria 4405451
339 2895502848 2895498888 Bacteria 5283788
340 2895512890 2895511927 Bacteria 6802080
341 2895522898 2895522137 Bacteria 3284416
342 2895525331 2895525241 Bacteria 3388457
343 2904447075 2904445276 Bacteria 5310396
344 2919092317 2919089067 Bacteria 4560942
345 2919131002 2919130084 Bacteria 5301837
346 2919137036 2919134579 Bacteria 4480386
347 2919515563 2919513703 Bacteria 3844312
348 2919678433 2919675420 Bacteria 3969095
349 2919690903 2919688452 Bacteria 4595932
350 2923519739 2923516293 Bacteria 3716336
351 2928499906 2928496128 Bacteria 4631123
352 2929196240 2929195423 Bacteria 5325372
353 2931383323 2931380184 Bacteria 4455911
354 2937614296 2937610967 Bacteria 4618818
355 2939589869 2939589442 Bacteria 4214238
356 2939624988 2939622612 Bacteria 4698046
357 2939629194 2939626828 Bacteria 4695272
358 2941478705 2941475908 Bacteria 4145589
359 2941493647 2941489479 Bacteria 6313767
360 2945998109 2945997725 Bacteria 6404843
361 2946020437 2946019816 Bacteria 4621265
362 2954020553 2954016120 Bacteria 6446024
363 2961050004 2961047084 Bacteria 4594415
364 2961064838 2961064222 Bacteria 4749990
365 2974307586 2974307012 Bacteria 4172388
366 2977248297 2977247770 Bacteria 4160543
367 2984517210 2984514374 Bacteria 4172479
368 2987608182 2987605356 Bacteria 4187822
369 2995949574 2995948881 Bacteria 6358104
370 8002870912 8002869464 Bacteria 3588529
371 8003015499 8003014200 Bacteria 4059994
372 8021625509 8021622325 Bacteria 4844743
373 8021628656 8021626552 Bacteria 4665214
374 SwRhRL2b_contig_429265
375 JGI25152J39213_1000028
376 JGI25152J39213_1000659
377 JGI25150J39212_1000006
378 JGI25150J39212_1000347
379 JGI25151J46595_10000024
380 JGI25151J46595_10000160
381 JGI25151J46595_10001250
382 JGI25153J46596_10000026
383 JGI25153J46596_10000903
384 rootH2_10018091
385 rootH1_10071290
386 Ga0055526_1000014
387 Ga0055526_1002302
388 Ga0055537_1000059
389 Ga0055537_1000403
390 Ga0055524_1000019
391 Ga0055524_1004153
392 Ga0055536_1000002
393 Ga0055536_1003020
394 Ga0055536_1005331
395 Ga0055536_1008710
396 Ga0055536_1009563
397 Ga0055536_1010355
398 Ga0055534_1000012
399 Ga0055534_1000112
400 Ga0055528_1000007
401 Ga0055528_1000305
402 Ga0055530_10001409
403 Ga0055530_10001757
404 Ga0055530_10001876
405 Ga0055531_10000148
406 Ga0055531_10001072
407 Ga0055531_10004948
408 Ga0055531_10008190
409 Ga0055531_10011518
410 Ga0055531_10013716
411 Ga0055531_10016800
412 Ga0058692_1000053
413 Ga0058692_1000370
414 Ga0065714_10064473
415 Ga0065704_10073162
416 Ga0065704_10090217
417 Ga0065704_10094056
418 Ga0070670_100004111
419 Ga0070668_100002795
420 Ga0070671_100038281
421 Ga0070674_100037964
422 Ga0070714_100014892
423 Ga0070701_10000428
424 Ga0070698_100057546
425 Ga0070699_100002718
426 Ga0068853_100100673
427 Ga0070665_100051349
428 Ga0068859_100000872
429 Ga0075364_10000199
430 Ga0075428_100054287
431 Ga0075428_100092185
432 Ga0097620_100000872
433 Ga0105251_10000155
434 Ga0105251_10004748
435 Ga0111539_10014064
436 Ga0111539_10020298
437 Ga0114129_10001958
438 Ga0105243_10001863
439 Ga0105243_10008431
440 Ga0105243_10040322
441 Ga0105248_10096843
442 Ga0157371_10000224
443 Ga0157371_10002212
444 Ga0157371_10022007
445 Ga0157370_10002047
446 Ga0157370_10050615
447 Ga0157370_10088995
448 Ga0157369_10000158
449 Ga0157369_10019609
450 Ga0157378_10006542
451 Ga0163162_10000011
452 Ga0157372_10135184
453 Ga0163163_10017692
454 Ga0182008_10000046
455 Ga0182008_10000204
456 Ga0182006_1000015
457 Ga0182006_1000241
458 Ga0182006_1000397
459 Ga0182006_1004449
460 Ga0182007_10000008
461 Ga0182007_10000131
462 Ga0182005_1000437
463 Ga0183373_1002
464 Ga0183360_10002
465 Ga0163161_10000570
466 Ga0163161_10000650
467 Ga0163161_10023656
468 Ga0207425_1000003
469 Ga0207425_1000064
470 Ga0209759_1006735
471 Ga0209129_1000022
472 Ga0209129_1000101
473 Ga0209565_1000001
474 Ga0209565_1000060
475 Ga0209673_1000001
476 Ga0209673_1000047
477 Ga0209675_1000001
478 Ga0209675_1000007
479 Ga0209675_1010157
480 Ga0209676_1000018
481 Ga0209676_1000022
482 Ga0209676_1000052
483 Ga0209676_1000501
484 Ga0209676_1000507
485 Ga0209676_1000620
486 Ga0209676_1002422
487 Ga0209676_1003943
488 Ga0209676_1009641
489 Ga0209025_1000006
490 Ga0209025_1000007
491 Ga0209025_1000048
492 Ga0209025_1001559
493 Ga0209025_1013181
494 Ga0209564_1000001
495 Ga0209564_1001294
496 Ga0209758_1000012
497 Ga0209758_1000056
498 Ga0209758_1015962
499 Ga0209050_1000020
500 Ga0209050_1000740
501 Ga0209050_1000870
502 Ga0209050_1002028
503 Ga0209050_1015559
504 Ga0209256_1000006
505 Ga0209256_1001986
506 Ga0209256_1002865
507 Ga0209256_1011260
508 Ga0209051_1004844
509 Ga0209257_1000006
510 Ga0209257_1000035
511 Ga0209257_1000046
512 Ga0209257_1000067
513 Ga0209257_1000414
514 Ga0209257_1001111
515 Ga0209257_1001426
516 Ga0209257_1002275
517 Ga0209257_1002563
518 Ga0209257_1004911
519 Ga0209257_1005671
520 Ga0207713_1016068
521 Ga0207647_10019957
522 Ga0207695_10056902
523 Ga0207657_10075615
524 Ga0207681_10002164
525 Ga0207650_10002717
526 Ga0207644_10010660
527 Ga0207690_10015911
528 Ga0207709_10000732
529 Ga0207709_10010350
530 Ga0207712_10008303
531 Ga0207668_10023445
532 Ga0207648_10067202
533 Ga0209371_1000018
534 Ga0209371_1000025
535 Ga0209983_1001342
536 Ga0209974_10013942
537 Ga0268266_10040837
538 Ga0268266_10063405
539 Ga0265336_10000028
540 Ga0268256_1000016
541 Ga0268256_1000027
542 Ga0307511_10065208
543 Ga0316177_1165294
544 Ga0316178_1110608
545 Ga0265339_10000557
546 Ga0265327_10000013
547 Ga0265316_10005975
548 Ga0265316_10018937
549 Ga0307513_10011438
550 Ga0307408_100007170
551 Ga0307408_100032215
552 Ga0265342_10005364
553 Ga0307405_10000014
554 Ga0307413_10018975
555 Ga0307410_10011503
556 Ga0307406_10002156
557 Ga0307406_10033347
558 Ga0307407_10000002
559 Ga0307407_10013824
560 Ga0307412_10000019
561 Ga0307416_100000004
562 Ga0307416_100000005
563 Ga0307416_100045083
564 Ga0307414_10000599
565 Ga0307414_10001239
566 Ga0307414_10016050
567 Ga0307414_10026764
568 Ga0395905_0021631
569 Ga0395901_0107213
570 Ga0237819_00128
571 Ga0237816_00230
572 Ga0436360_0192922
573 Ga0439465_0005663
574 Ga0451804_1047301
575 Ga0451807_1312642
576 Ga0451843_0142842
577 Ga0439433_0010797
578 Ga0439432_002165
579 Ga0439449_0001576
580 Ga0439449_0011435
581 Ga0439449_0014049
582 Ga0450889_000007
583 Ga0451577_0019306
584 Ga0451577_0077531
585 Ga0453683_0047266
586 Ga0453684_0002785
587 Ga0451576_0001398
588 Ga0451576_0030581
589 Ga0495638_0000744
590 Ga0495650_0021230
591 Ga0495596_0001507
592 Ga0495606_0044349
593 Ga0495610_0000001
594 Ga0495610_0000204
595 Ga0495610_0000279
596 Ga0495610_0018928
597 Ga0495616_0014458
598 Ga0495631_0000804
599 Ga0495643_0000886
600 Ga0495598_0001236
601 Ga0495645_0110061
602 Ga0495656_0012878
603 Ga0495613_0052521
604 Ga0495671_0003312
605 Ga0495671_0023700
606 Ga0495672_0000411
607 Ga0496101_0115828
608 Ga0496102_0061887
609 Ga0496104_0017326
610 Ga0496104_0120428
611 Ga0496105_0000903
612 Ga0496107_0056827
613 Ga0496113_0010796
614 Ga0496114_0001623
615 Ga0496114_0010572
616 Ga0496115_0006217
617 Ga0496116_0026926
618 Ga0496117_0001004
619 Ga0496117_0001505
620 Ga0496117_0009080
621 Ga0496117_0015676
622 Ga0496118_0000787
623 Ga0496118_0000945
624 Ga0496118_0009317
625 Ga0496119_0000518
626 Ga0496119_0000719
627 Ga0496120_0000630
628 Ga0496120_0001627
629 Ga0496121_0001866
630 Ga0496121_0017870
631 Ga0496122_0000791
632 Ga0496122_0001011
633 Ga0496122_0014322
634 Ga0496122_0015347
635 Ga0496122_0027786
636 Ga0496123_0000658
637 Ga0496123_0001830
638 Ga0496123_0023775
639 Ga0496123_0027968
640 Ga0496124_0000034
641 Ga0496124_0000219
642 Ga0496124_0007115
643 Ga0496124_0010021
644 Ga0496124_0014907
645 Ga0496124_0024251
646 Ga0496124_0058819
647 Ga0496124_0074029
648 Ga0496125_0013956
649 Ga0496126_0001265
650 Ga0496126_0003926
651 Ga0496126_0024439
652 Ga0496126_0030233
653 Ga0496126_0096155
654 Ga0501033_0001118
655 Ga0501034_0001210
656 Ga0501034_0002264
657 Ga0501034_0003371
658 Ga0501036_0026767
659 Ga0501038_0006615
660 Ga0501038_0046842
661 Ga0501047_0103679
662 Ga0501068_0037605
663 Ga0501070_0063611
664 Ga0501265_000651
665 Ga0501275_000085
666 Ga0501044_0026228
667 nmdc:mga00v17_574_c1
668 Ga0500635_0000036
669 Ga0500641_0016760
670 Ga0500562_000837
671 2644528133
672 2547501623
673 2572254272
674 2578456932
675 2586207112
676 2587745677
677 2588445537
678 2590611146
679 2643818221
680 2643880409
681 2643906670
682 2643913830
683 2643937890
684 2643973441
685 2644078799
686 2644660984
687 2644693576
688 2644699066
689 2738852694
690 2739586616
691 2739614966
692 2739645915
693 2747948653
694 2748018768
695 2765580573
696 2816518404
697 2819547061
698 2819661370
699 2842394487
700 2842727197
701 2842758945
702 2842781931
703 2842910801
704 2849284017
705 2852652086
706 2852687241
707 2857444228
708 2857628101
709 2874223240
710 2883071211
711 2894414317
712 2895502848
713 2895512890
714 2895522898
715 2895525331
716 2904447075
717 2919092317
718 2919131002
719 2919137036
720 2919515563
721 2919678433
722 2919690903
723 2923519739
724 2928499906
725 2929196240
726 2931383323
727 2937614296
728 2939589869
729 2939624988
730 2939629194
731 2941478705
732 2941493647
733 2945998109
734 2946020437
735 2954020553
736 2961050004
737 2961064838
738 2974307586
739 2977248297
740 2984517210
741 2987608182
742 2995949574
743 8002870912
744 8003015499
745 8021625509
746 8021628656

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00326

Peptidase_S9

Prolyl oligopeptidase family

531

749

0.96

PF02897

Peptidase_S9_N

Prolyl oligopeptidase, N-terminal beta-propeller domain

68

474

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ywp-assembly1.cif.gz_A closed conformation of oligopeptidase b from serratia proteomaculans with covalently bound tck 0.9854 13 687
7ywp-assembly1.cif.gz_A closed conformation of oligopeptidase b from serratia proteomaculans with covalently bound tck 0.9811 13 687
2xe4-assembly1.cif.gz_A structure of oligopeptidase b from leishmania major 0.9729 12 693
7ne4-assembly1.cif.gz_A e125a mutant of oligopeptidase b from s. proteomaculans with modified hinge region 0.9674 13 688
7ne4-assembly1.cif.gz_A e125a mutant of oligopeptidase b from s. proteomaculans with modified hinge region 0.9646 13 688
ID Description Score Start End Superfamily
af_P24555_408_681_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9885 420 688 3.40.50.1820
af_Q4D6H1_442_707_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9884 426 688 3.40.50.1820
4bp9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.981 418 695 3.40.50.1820
af_P24555_74_402_2.130.10.120 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;Prolyl oligopeptidase, N-terminal domain 0.9744 89 414 2.130.10.120
af_Q4D6H1_442_707_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9737 426 688 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A2D0J460-F1-model_v4 Oligopeptidase B 0.9968 493 645 GO:0004252
GO:0006508
AF-A0A348SMD7-F1-model_v4 deleted 0.9945 548 662
AF-A0A1S3ZDP5-F1-model_v4 Prolyl endopeptidase (EC 3.4.21.-) 0.9928 420 688 GO:0004252
GO:0006508
AF-H3G515-F1-model_v4 Prolyl endopeptidase (EC 3.4.21.-) 0.9925 459 687 GO:0004252
GO:0006508
AF-A0A7Y2GH74-F1-model_v4 S9 family peptidase 0.9908 439 692 GO:0004252
GO:0006508

Map