F426937

General Info

Members Datasets Scaffolds Average Seq Length
375 242 347 334

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100002657|Ga0070690_1000026575
Length 365
Sequence MWFMTDARANALPTESSDPLASSFATSYTGVMAFMTVVAEGSFAKAGDRLGIGRSAVSRSVQKLETQLGVRLISRTTRSLSLTGEGQLFHAHCKPGIECISQALEGMRDLREGPPRGILRICSTVGFGRKVVAPLLKGFRSAHPEVEVDLMLNDGLTDFGSDNVDVSFRNGRIEDGRIVAKLLFPMQMQVCASPDYVSKHGRPRTVDELADHRCINFRFASGRIYEWEFKVEGQLLKATPRASLTFNDADLVLSAVLDGQGIAQMAGYQICQLLREGRLVACLAQYMPDDRGHYLCHASRLHLPPRVRVFIDYMTDAIRALDLDCVNDALEPASSPRPSISRIRRCRRTSTPQRSTPVSRSGCSR

Samples

Sample ID Description Type Environment
1 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
2 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
3 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
4 2643221569 Achromobacter sp. Root565 Isolate Unclassified
5 2643221594 Achromobacter sp. Root170 Isolate Unclassified
6 2643221621 Achromobacter sp. Root83 Isolate Unclassified
7 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
8 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
9 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
10 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
11 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
12 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
13 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
14 2858950400 Achromobacter sp. K91 Isolate Unclassified
15 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
16 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
17 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
18 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
19 2941479691
20 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
21 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
22 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
23 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
24 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
25 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
28 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
29 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
30 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
31 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
32 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
33 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
34 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
35 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
36 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
37 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
38 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
39 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
40 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
41 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
42 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
43 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
44 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
45 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
46 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
58 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
78 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
79 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
80 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
83 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
84 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
86 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
92 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
95 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
115 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
116 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
126 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
127 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
128 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
129 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
130 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
131 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
132 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
133 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
134 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
135 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
136 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
137 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
138 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
139 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
140 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
141 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
142 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
143 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
144 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
145 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
146 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
147 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
148 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
149 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
150 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
151 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
152 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
153 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
154 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
155 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
156 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
157 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
158 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
159 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
160 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
161 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
162 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
163 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
164 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
165 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
166 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
167 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
168 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
169 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
170 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
171 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
172 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
173 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
174 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
175 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
176 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
177 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
178 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
179 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
180 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
181 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
182 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
183 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
184 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
185 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
186 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
187 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
188 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
189 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
190 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
191 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
192 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
193 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
194 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
195 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
196 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
197 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
198 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
199 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
200 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
201 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
202 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
203 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
204 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
205 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
206 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
207 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
208 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
209 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
210 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
211 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
212 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
213 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
214 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
215 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
216 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
217 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
218 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
219 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
220 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
221 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
222 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
223 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
224 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
225 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
226 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
227 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
228 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
229 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
230 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
231 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
232 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
233 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
234 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
235 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
236 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
237 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
238 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
239 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
240 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
241 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
242 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.4
Metatranscriptomes 0
Isolates 5.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16
Nodule 0.8
Rhizoplane 2.93
Rhizosphere 62.4
Stem 0
Stem Tuber 0
Unclassified 17.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1004015 3300001904 Bacteria 2530
2 JGI24739J22299_10002021 3300001989 Bacteria 7764
3 JGI24735J21928_10000222 3300002067 Bacteria 19981
4 JGI24735J21928_10026481 3300002067 Bacteria 1742
5 JGI25156J39149_1000035 3300002705 Bacteria 112093
6 JGI25156J39149_1000322 3300002705 Bacteria 31770
7 JGI25156J39149_1001052 3300002705 Bacteria 12760
8 JGI25154J39366_1002867 3300002738 Bacteria 4048
9 JGI25157J39369_1000048 3300002741 Bacteria 117419
10 JGI25153J46596_10002557 3300003215 Bacteria 10430
11 rootH1_10119639 3300003316 Bacteria 4236
12 rootL2_10031964 3300003322 Bacteria 8523
13 rootL2_10075036 3300003322 Bacteria 5345
14 JGI25160J50197_1000017 3300003354 Bacteria 246175
15 Ga0055539_1000762 3300003752 Bacteria 7798
16 Ga0055533_1001105 3300003756 Bacteria 7721
17 Ga0055526_1012690 3300003771 Bacteria 3645
18 Ga0055537_1000382 3300003773 Bacteria 29844
19 Ga0055534_1000009 3300003784 Bacteria 210256
20 Ga0055534_1000014 3300003784 Bacteria 150629
21 Ga0055528_1000012 3300003790 Bacteria 182704
22 Ga0055528_1000213 3300003790 Bacteria 49270
23 Ga0055530_10000210 3300003791 Bacteria 53218
24 Ga0055530_10018841 3300003791 Bacteria 2113
25 Ga0055540_1000007 3300003792 Bacteria 318178
26 Ga0055531_10009927 3300003794 Bacteria 4809
27 Ga0065165_1001771 3300005262 Bacteria 21408
28 Ga0065714_10068760 3300005288 Bacteria 4555
29 Ga0070658_10011281 3300005327 Bacteria 7163
30 Ga0070658_10126774 3300005327 Bacteria 2125
31 Ga0070690_100002657 3300005330 Bacteria 9631
32 Ga0070690_100007462 3300005330 Bacteria 6264
33 Ga0070661_100121841 3300005344 Bacteria 1954
34 Ga0070659_100226802 3300005366 Bacteria 1543
35 Ga0070667_100028641 3300005367 Bacteria 4638
36 Ga0068867_100000438 3300005459 Bacteria 27700
37 Ga0068855_100005554 3300005563 Bacteria 15389
38 Ga0068855_100020926 3300005563 Bacteria 7844
39 Ga0068855_100123453 3300005563 Bacteria 2962
40 Ga0068857_100002571 3300005577 Bacteria 14861
41 Ga0068854_100001033 3300005578 Bacteria 16705
42 Ga0068856_100116779 3300005614 Bacteria 2669
43 Ga0068852_100155152 3300005616 Bacteria 2132
44 Ga0068861_100038301 3300005719 Bacteria 3569
45 Ga0068861_100072516 3300005719 Bacteria 2672
46 Ga0075369_10080019 3300006186 Bacteria 1448
47 Ga0097621_100192117 3300006237 Bacteria 1768
48 Ga0075370_10000465 3300006353 Bacteria 15139
49 Ga0075370_10019921 3300006353 Bacteria 3657
50 Ga0075370_10048707 3300006353 Bacteria 2401
51 Ga0068871_100328560 3300006358 Bacteria 1348
52 Ga0099826_10002752 3300006948 Bacteria 11530
53 Ga0105251_10000029 3300009011 Bacteria 125097
54 Ga0105240_10000934 3300009093 Bacteria 51919
55 Ga0105240_10181295 3300009093 Bacteria 2485
56 Ga0105247_10006795 3300009101 Bacteria 7055
57 Ga0105243_10002772 3300009148 Bacteria 14575
58 Ga0105243_10046254 3300009148 Bacteria 3423
59 Ga0105241_10130418 3300009174 Bacteria 2034
60 Ga0105241_10249957 3300009174 Bacteria 1503
61 Ga0105242_10006614 3300009176 Bacteria 8932
62 Ga0105242_10059141 3300009176 Bacteria 3144
63 Ga0105237_10000529 3300009545 Bacteria 53671
64 Ga0105238_10002198 3300009551 Bacteria 19700
65 Ga0105238_10138422 3300009551 Bacteria 2412
66 Ga0105239_10000802 3300010375 Bacteria 44448
67 Ga0105239_10014860 3300010375 Bacteria 8630
68 Ga0105239_10202800 3300010375 Bacteria 2222
69 Ga0105239_10387480 3300010375 Bacteria 1581
70 Ga0105246_10042005 3300011119 Bacteria 3095
71 Ga0105246_10057074 3300011119 Bacteria 2701
72 Ga0157373_10000985 3300013100 Bacteria 22021
73 Ga0157373_10005709 3300013100 Bacteria 9326
74 Ga0157371_10179997 3300013102 Bacteria 1512
75 Ga0157370_10003293 3300013104 Bacteria 19049
76 Ga0157370_10016298 3300013104 Bacteria 7531
77 Ga0157370_10031882 3300013104 Bacteria 5151
78 Ga0157369_10000044 3300013105 Bacteria 178695
79 Ga0157369_10002752 3300013105 Bacteria 20992
80 Ga0157369_10194818 3300013105 Bacteria 2128
81 Ga0157374_10000039 3300013296 Bacteria 164906
82 Ga0157374_10000888 3300013296 Bacteria 26115
83 Ga0157378_10008465 3300013297 Bacteria 8960
84 Ga0157378_10008823 3300013297 Bacteria 8777
85 Ga0157372_10001457 3300013307 Bacteria 25640
86 Ga0182008_10000350 3300014497 Bacteria 35896
87 Ga0182008_10035800 3300014497 Bacteria 2484
88 Ga0182008_10080170 3300014497 Bacteria 1606
89 Ga0157377_10000061 3300014745 Bacteria 82275
90 Ga0182006_1000400 3300015261 Bacteria 35246
91 Ga0182007_10002025 3300015262 Bacteria 10430
92 Ga0182007_10042048 3300015262 Bacteria 1522
93 Ga0209435_107740 3300025206 Bacteria 1187
94 Ga0209674_100227 3300025226 Bacteria 50941
95 Ga0209672_100104 3300025228 Bacteria 103234
96 Ga0209646_1000131 3300025246 Bacteria 128289
97 Ga0209026_1000038 3300025250 Bacteria 281227
98 Ga0209677_100616 3300025253 Bacteria 19095
99 Ga0209759_1000008 3300025256 Bacteria 461395
100 Ga0209759_1000031 3300025256 Bacteria 281227
101 Ga0209759_1000686 3300025256 Bacteria 30494
102 Ga0209565_1000015 3300025263 Bacteria 494091
103 Ga0209673_1000017 3300025273 Bacteria 492994
104 Ga0209673_1005777 3300025273 Bacteria 6155
105 Ga0209675_1000012 3300025291 Bacteria 494061
106 Ga0209676_1020461 3300025292 Bacteria 2247
107 Ga0209564_1000016 3300025295 Bacteria 613131
108 Ga0209758_1000045 3300025297 Bacteria 369174
109 Ga0209050_1000179 3300025298 Bacteria 143878
110 Ga0209050_1000243 3300025298 Bacteria 117715
111 Ga0209050_1001365 3300025298 Bacteria 26708
112 Ga0209050_1029302 3300025298 Bacteria 1764
113 Ga0209256_1000314 3300025299 Bacteria 84164
114 Ga0209256_1015829 3300025299 Bacteria 2614
115 Ga0207426_1000107 3300025302 Bacteria 242623
116 Ga0209051_1000004 3300025303 Bacteria 1155596
117 Ga0209051_1019060 3300025303 Bacteria 3010
118 Ga0209051_1021271 3300025303 Bacteria 2767
119 Ga0209257_1000038 3300025304 Bacteria 609032
120 Ga0209257_1000044 3300025304 Bacteria 486709
121 Ga0209257_1033281 3300025304 Bacteria 1623
122 Ga0207713_1000112 3300025735 Bacteria 133341
123 Ga0207647_10001050 3300025904 Bacteria 21284
124 Ga0207647_10005249 3300025904 Bacteria 9535
125 Ga0207705_10027448 3300025909 Bacteria 4060
126 Ga0207705_10060080 3300025909 Bacteria 2745
127 Ga0207695_10041395 3300025913 Bacteria 4931
128 Ga0207695_10123823 3300025913 Bacteria 2550
129 Ga0207695_10351831 3300025913 Bacteria 1360
130 Ga0207671_10004445 3300025914 Bacteria 13397
131 Ga0207657_10002915 3300025919 Bacteria 18364
132 Ga0207694_10004280 3300025924 Bacteria 11171
133 Ga0207694_10016057 3300025924 Bacteria 5649
134 Ga0207686_10003973 3300025934 Bacteria 7938
135 Ga0207686_10004133 3300025934 Bacteria 7789
136 Ga0207709_10001164 3300025935 Bacteria 19115
137 Ga0207709_10013510 3300025935 Bacteria 4504
138 Ga0207667_10014900 3300025949 Bacteria 8841
139 Ga0207667_10019777 3300025949 Bacteria 7506
140 Ga0207651_10005590 3300025960 Bacteria 6475
141 Ga0207668_10165347 3300025972 Bacteria 1729
142 Ga0207640_10005806 3300025981 Bacteria 6729
143 Ga0207702_10000668 3300026078 Bacteria 37297
144 Ga0207648_10001306 3300026089 Bacteria 27754
145 Ga0207674_10010075 3300026116 Bacteria 10747
146 Ga0207675_100029684 3300026118 Bacteria 5092
147 Ga0307517_10005370 3300028786 Bacteria 19361
148 Ga0307517_10039830 3300028786 Bacteria 5146
149 Ga0307517_10053847 3300028786 Bacteria 3997
150 Ga0307517_10105597 3300028786 Bacteria 2184
151 Ga0307513_10001264 3300031456 Bacteria 36634
152 Ga0307509_10153536 3300031507 Bacteria 2213
153 Ga0307508_10001770 3300031616 Bacteria 24000
154 Ga0307516_10044519 3300031730 Bacteria 4390
155 Ga0307516_10107741 3300031730 Bacteria 2594
156 Ga0307412_10000503 3300031911 Bacteria 23352
157 Ga0307507_10024680 3300033179 Bacteria 6542
158 Ga0307507_10067659 3300033179 Bacteria 3265
159 Ga0395899_0003954 3300037312 Bacteria 11678
160 Ga0395899_0195920 3300037312 Bacteria 1411
161 Ga0395900_0079000 3300037418 Bacteria 3381
162 Ga0395900_0157681 3300037418 Bacteria 2317
163 Ga0395900_0255371 3300037418 Bacteria 1752
164 Ga0395905_0000017 3300037471 Bacteria 376619
165 Ga0395905_0034149 3300037471 Bacteria 4775
166 Ga0395905_0079081 3300037471 Bacteria 3082
167 Ga0395901_0005365 3300038443 Bacteria 12957
168 Ga0395901_0166625 3300038443 Bacteria 2313
169 Ga0439436_0000127 3300041404 Bacteria 17573
170 Ga0439466_0000317 3300041411 Bacteria 18660
171 Ga0439465_0001056 3300041413 Bacteria 8785
172 Ga0451853_1478638 3300041512 Unclassified 1224
173 Ga0439431_0001344 3300041997 Bacteria 5420
174 Ga0439433_0002243 3300041999 Bacteria 4082
175 Ga0439445_0001239 3300042004 Bacteria 5523
176 Ga0439448_0000022 3300042005 Bacteria 26210
177 Ga0439432_009828 3300042006 Bacteria 3328
178 Ga0439449_0000262 3300042007 Bacteria 18926
179 Ga0439452_002855 3300042010 Bacteria 6221
180 Ga0439457_000626 3300042014 Bacteria 10441
181 Ga0439446_0000684 3300042156 Bacteria 7079
182 Ga0439458_0001430 3300042157 Bacteria 6016
183 Ga0439434_0008238 3300042435 Bacteria 3057
184 Ga0466965_0039432 3300044683 Bacteria 2322
185 Ga0466959_0165596 3300045049 Bacteria 1553
186 Ga0495592_0001798 3300046454 Bacteria 15080
187 Ga0495592_0051661 3300046454 Bacteria 3053
188 Ga0495603_0035083 3300046455 Bacteria 3014
189 Ga0495629_0011538 3300046459 Bacteria 6418
190 Ga0495641_0014001 3300046461 Bacteria 4366
191 Ga0495651_0159734 3300046462 Bacteria 1616
192 Ga0495653_0000353 3300046463 Bacteria 37368
193 Ga0495653_0014638 3300046463 Bacteria 6399
194 Ga0495653_0030921 3300046463 Bacteria 4259
195 Ga0495580_0011756 3300046472 Bacteria 6760
196 Ga0495580_0012761 3300046472 Bacteria 6439
197 Ga0495580_0023680 3300046472 Bacteria 4503
198 Ga0495580_0024392 3300046472 Bacteria 4428
199 Ga0495582_0002002 3300046473 Bacteria 11413
200 Ga0495582_0009438 3300046473 Bacteria 5373
201 Ga0495605_0002175 3300046474 Bacteria 12245
202 Ga0495605_0005309 3300046474 Bacteria 7513
203 Ga0495639_0019701 3300046475 Bacteria 2944
204 Ga0495662_0007537 3300046476 Bacteria 5373
205 Ga0495662_0015797 3300046476 Bacteria 3663
206 Ga0495664_0001108 3300046477 Bacteria 13945
207 Ga0495585_0060066 3300046492 Bacteria 2093
208 Ga0495594_0008177 3300046499 Bacteria 5384
209 Ga0495583_0002799 3300046506 Bacteria 14321
210 Ga0495606_0103765 3300046507 Bacteria 1726
211 Ga0495616_0000050 3300046513 Bacteria 108049
212 Ga0495616_0057377 3300046513 Bacteria 1920
213 Ga0495618_0059045 3300046514 Bacteria 2430
214 Ga0495620_0027703 3300046515 Bacteria 2648
215 Ga0495628_0000967 3300046516 Bacteria 26255
216 Ga0495628_0015247 3300046516 Bacteria 6419
217 Ga0495628_0024280 3300046516 Bacteria 4963
218 Ga0495630_0013150 3300046517 Bacteria 6017
219 Ga0495631_0007077 3300046518 Bacteria 5738
220 Ga0495632_0000155 3300046519 Bacteria 70814
221 Ga0495632_0003490 3300046519 Bacteria 11121
222 Ga0495632_0008001 3300046519 Bacteria 6562
223 Ga0495643_0057531 3300046522 Bacteria 2072
224 Ga0495648_0010037 3300046524 Bacteria 7257
225 Ga0495648_0014137 3300046524 Bacteria 5861
226 Ga0495648_0033289 3300046524 Bacteria 3367
227 Ga0495666_0000778 3300046526 Bacteria 14730
228 Ga0495666_0070109 3300046526 Bacteria 1667
229 Ga0495666_0087467 3300046526 Unclassified 1472
230 Ga0495642_0000136 3300046528 Bacteria 42707
231 Ga0495652_0095684 3300046529 Bacteria 2419
232 Ga0495654_0003006 3300046530 Bacteria 10532
233 Ga0495665_0006269 3300046531 Bacteria 6416
234 Ga0495586_0006386 3300046535 Bacteria 6298
235 Ga0495587_0001001 3300046536 Bacteria 18582
236 Ga0495609_0007621 3300046538 Bacteria 5379
237 Ga0495645_0011970 3300046543 Bacteria 6113
238 Ga0495634_0010602 3300046642 Bacteria 6748
239 Ga0495634_0068162 3300046642 Bacteria 2351
240 Ga0495611_0016461 3300046648 Bacteria 3161
241 Ga0495625_0002946 3300046660 Bacteria 17744
242 Ga0495625_0003060 3300046660 Bacteria 17136
243 Ga0495625_0030992 3300046660 Bacteria 3982
244 Ga0495635_0010302 3300046663 Bacteria 6538
245 Ga0495661_0004101 3300046665 Bacteria 10611
246 Ga0495588_0008533 3300046674 Bacteria 4708
247 Ga0495599_0005104 3300046678 Bacteria 7821
248 Ga0495623_0044549 3300046679 Bacteria 2818
249 Ga0495646_0003343 3300046680 Bacteria 9971
250 Ga0495646_0008804 3300046680 Bacteria 6409
251 Ga0495646_0009904 3300046680 Bacteria 6055
252 Ga0495646_0033760 3300046680 Bacteria 3181
253 Ga0495669_0000539 3300046684 Bacteria 17061
254 Ga0495613_0031483 3300046689 Bacteria 3940
255 Ga0495624_0001623 3300046690 Bacteria 17239
256 Ga0495624_0010387 3300046690 Bacteria 6418
257 Ga0495670_0007149 3300046691 Bacteria 5496
258 Ga0495649_0000446 3300046694 Bacteria 35718
259 Ga0495649_0002140 3300046694 Bacteria 14130
260 Ga0495589_0061038 3300046794 Bacteria 1851
261 Ga0495660_0005708 3300046810 Bacteria 7433
262 Ga0495660_0134908 3300046810 Bacteria 1234
263 Ga0495581_0002933 3300047315 Bacteria 9756
264 Ga0495604_0001104 3300047317 Bacteria 22398
265 Ga0495604_0023468 3300047317 Bacteria 4921
266 Ga0495674_0001915 3300047319 Bacteria 20550
267 Ga0495674_0057208 3300047319 Bacteria 3413
268 Ga0495672_0012013 3300047320 Bacteria 6065
269 Ga0495672_0026978 3300047320 Bacteria 3657
270 Ga0495676_0017091 3300047321 Bacteria 6419
271 Ga0495680_0003934 3300047322 Bacteria 14369
272 Ga0495680_0083343 3300047322 Bacteria 2411
273 Ga0495683_0012133 3300047323 Bacteria 4528
274 Ga0495683_0129645 3300047323 Bacteria 1190
275 Ga0495687_000669 3300047443 Bacteria 39168
276 Ga0495687_011117 3300047443 Bacteria 4864
277 Ga0495675_0005193 3300047444 Bacteria 7928
278 Ga0495675_0085851 3300047444 Bacteria 1978
279 Ga0495679_001011 3300047446 Bacteria 17278
280 Ga0495673_0010803 3300047469 Bacteria 4945
281 Ga0495673_0034465 3300047469 Bacteria 2339
282 Ga0495684_0025796 3300047471 Bacteria 4516
283 Ga0495686_0002594 3300047472 Bacteria 16790
284 Ga0495593_0020161 3300047673 Bacteria 3734
285 Ga0495602_0012548 3300048088 Bacteria 8698
286 Ga0495602_0034166 3300048088 Bacteria 4761
287 Ga0495614_0013874 3300048089 Bacteria 3531
288 Ga0495626_0048508 3300048091 Bacteria 1970
289 Ga0496100_0000185 3300048903 Bacteria 34352
290 Ga0496101_0000266 3300048904 Bacteria 36897
291 Ga0496101_0138362 3300048904 Bacteria 1854
292 Ga0496102_0000616 3300048905 Bacteria 36897
293 Ga0496102_0062787 3300048905 Bacteria 3402
294 Ga0496103_0000720 3300048906 Bacteria 24450
295 Ga0496104_0041971 3300048907 Bacteria 4290
296 Ga0496105_0045002 3300048908 Bacteria 3641
297 Ga0496106_0196659 3300048909 Bacteria 1604
298 Ga0496107_0035365 3300048910 Bacteria 3582
299 Ga0496114_0433087 3300048917 Bacteria 1165
300 Ga0496116_0008625 3300048919 Bacteria 8820
301 Ga0496116_0012103 3300048919 Bacteria 7068
302 Ga0496116_0065823 3300048919 Bacteria 2322
303 Ga0496117_0001052 3300048920 Bacteria 42055
304 Ga0496117_0004600 3300048920 Bacteria 15073
305 Ga0496117_0008863 3300048920 Bacteria 9493
306 Ga0496117_0051605 3300048920 Bacteria 2906
307 Ga0496117_0086354 3300048920 Bacteria 2039
308 Ga0496118_0000984 3300048921 Bacteria 44357
309 Ga0496118_0001357 3300048921 Bacteria 36897
310 Ga0496118_0004178 3300048921 Bacteria 17389
311 Ga0496118_0005141 3300048921 Bacteria 15010
312 Ga0496118_0011760 3300048921 Bacteria 8505
313 Ga0496119_0014385 3300048922 Bacteria 6199
314 Ga0496119_0077957 3300048922 Bacteria 1918
315 Ga0496120_0002913 3300048923 Bacteria 16344
316 Ga0496120_0046832 3300048923 Bacteria 2497
317 Ga0496121_0002696 3300048924 Bacteria 26537
318 Ga0496121_0003098 3300048924 Bacteria 24041
319 Ga0496121_0023748 3300048924 Bacteria 5892
320 Ga0496121_0054644 3300048924 Bacteria 3334
321 Ga0496122_0000047 3300048925 Bacteria 274226
322 Ga0496123_0000077 3300048926 Bacteria 192607
323 Ga0496123_0204243 3300048926 Bacteria 1010
324 Ga0496125_0000105 3300048928 Bacteria 200717
325 Ga0496125_0022639 3300048928 Bacteria 5828
326 Ga0496126_0010668 3300048929 Bacteria 9604
327 Ga0501032_0003715 3300049569 Bacteria 11587
328 Ga0501033_0008900 3300049570 Bacteria 7754
329 Ga0501034_0043179 3300049571 Bacteria 4564
330 Ga0501043_0148154 3300049579 Bacteria 1837
331 Ga0501047_0012023 3300049581 Bacteria 8191
332 Ga0501068_0111884 3300049584 Bacteria 1698
333 Ga0501035_0017554 3300049822 Bacteria 6603
334 Ga0501044_0011069 3300049823 Bacteria 9785
335 nmdc:mga0k408_64374_c1 3300050493 Bacteria 2134
336 nmdc:mga0k408_98466_c1 3300050493 Bacteria 1723
337 nmdc:mga07m45_1936_c1 3300050496 Bacteria 9572
338 nmdc:mga07m45_2328_c1 3300050496 Bacteria 8897
339 nmdc:mga07m45_47983_c1 3300050496 Bacteria 2401
340 nmdc:mga07m45_6070_c1 3300050496 Bacteria 6084
341 nmdc:mga07m45_852_c1 3300050496 Bacteria 13257
342 Ga0500658_0000038 3300053134 Bacteria 84273
343 Ga0500658_0000752 3300053134 Bacteria 13374
344 Ga0500559_0006177 3300053136 Bacteria 5420
345 Ga0500559_0017355 3300053136 Bacteria 3039
346 Ga0500568_0000936 3300053139 Bacteria 20129
347 Ga0500622_0001694 3300053156 Bacteria 17131

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046526 Ga0495666_0087467 Ga0495666_0087467_569_1462 295
2 3300025298 Ga0209050_1000179 Ga0209050_100017981 296
3 3300025303 Ga0209051_1019060 Ga0209051_10190603 296
4 3300048919 Ga0496116_0065823 Ga0496116_0065823_1393_2304 300
5 3300005330 Ga0070690_100007462 Ga0070690_1000074623 301
6 3300037312 Ga0395899_0003954 Ga0395899_0003954_4554_5459 301
7 3300037418 Ga0395900_0255371 Ga0395900_0255371_431_1336 301
8 3300048926 Ga0496123_0204243 Ga0496123_0204243_25_954 305
9 3300053136 Ga0500559_0006177 Ga0500559_0006177_3874_4911 308
10 3300003791 Ga0055530_10000210 Ga0055530_1000021035 309
11 3300003791 Ga0055530_10018841 Ga0055530_100188412 309
12 3300003792 Ga0055540_1000007 Ga0055540_1000007125 309
13 3300003794 Ga0055531_10009927 Ga0055531_100099275 309
14 3300025298 Ga0209050_1001365 Ga0209050_10013652 309
15 3300047320 Ga0495672_0026978 Ga0495672_0026978_1846_2778 309
16 3300031911 Ga0307412_10000503 Ga0307412_1000050317 310
17 3300011119 Ga0105246_10042005 Ga0105246_100420052 311
18 3300013297 Ga0157378_10008823 Ga0157378_1000882310 311
19 3300003771 Ga0055526_1012690 Ga0055526_10126904 312
20 3300003773 Ga0055537_1000382 Ga0055537_10003825 312
21 3300003784 Ga0055534_1000009 Ga0055534_100000927 312
22 3300003790 Ga0055528_1000012 Ga0055528_1000012152 312
23 3300025263 Ga0209565_1000015 Ga0209565_1000015303 312
24 3300025273 Ga0209673_1000017 Ga0209673_1000017194 312
25 3300025291 Ga0209675_1000012 Ga0209675_1000012179 312
26 3300025295 Ga0209564_1000016 Ga0209564_1000016292 312
27 3300025299 Ga0209256_1000314 Ga0209256_100031424 312
28 3300053156 Ga0500622_0001694 Ga0500622_0001694_3627_4718 312
29 3300049570 Ga0501033_0008900 Ga0501033_0008900_3882_4928 314
30 3300049571 Ga0501034_0043179 Ga0501034_0043179_3057_4103 314
31 3300049579 Ga0501043_0148154 Ga0501043_0148154_669_1715 314
32 3300049581 Ga0501047_0012023 Ga0501047_0012023_3484_4530 314
33 3300049822 Ga0501035_0017554 Ga0501035_0017554_2090_3136 314
34 3300049823 Ga0501044_0011069 Ga0501044_0011069_4130_5176 314
35 3300003215 JGI25153J46596_10002557 JGI25153J46596_100025579 315
36 3300025297 Ga0209758_1000045 Ga0209758_100004595 315
37 3300041404 Ga0439436_0000127 Ga0439436_0000127_4554_5504 315
38 3300041411 Ga0439466_0000317 Ga0439466_0000317_8903_9853 315
39 3300041413 Ga0439465_0001056 Ga0439465_0001056_5471_6421 315
40 3300041997 Ga0439431_0001344 Ga0439431_0001344_3756_4706 315
41 3300041999 Ga0439433_0002243 Ga0439433_0002243_546_1496 315
42 3300042004 Ga0439445_0001239 Ga0439445_0001239_3862_4812 315
43 3300042006 Ga0439432_009828 Ga0439432_009828_2132_3082 315
44 3300042007 Ga0439449_0000262 Ga0439449_0000262_5080_6030 315
45 3300042010 Ga0439452_002855 Ga0439452_002855_909_1859 315
46 3300042014 Ga0439457_000626 Ga0439457_000626_4931_5881 315
47 3300042156 Ga0439446_0000684 Ga0439446_0000684_3649_4599 315
48 3300042435 Ga0439434_0008238 Ga0439434_0008238_378_1328 315
49 3300046475 Ga0495639_0019701 Ga0495639_0019701_1866_2822 315
50 3300048924 Ga0496121_0002696 Ga0496121_0002696_20710_21678 316
51 3300025273 Ga0209673_1005777 Ga0209673_10057776 318
52 3300025299 Ga0209256_1015829 Ga0209256_10158292 318
53 3300046454 Ga0495592_0051661 Ga0495592_0051661_231_1268 319
54 3300046461 Ga0495641_0014001 Ga0495641_0014001_1570_2607 319
55 3300046462 Ga0495651_0159734 Ga0495651_0159734_325_1362 319
56 3300046463 Ga0495653_0030921 Ga0495653_0030921_949_1986 319
57 3300046472 Ga0495580_0023680 Ga0495580_0023680_361_1398 319
58 3300046473 Ga0495582_0002002 Ga0495582_0002002_3033_4070 319
59 3300046476 Ga0495662_0007537 Ga0495662_0007537_3928_4965 319
60 3300046477 Ga0495664_0001108 Ga0495664_0001108_11473_12510 319
61 3300046514 Ga0495618_0059045 Ga0495618_0059045_948_1985 319
62 3300046516 Ga0495628_0024280 Ga0495628_0024280_821_1858 319
63 3300046517 Ga0495630_0013150 Ga0495630_0013150_2249_3286 319
64 3300046524 Ga0495648_0014137 Ga0495648_0014137_1677_2714 319
65 3300046526 Ga0495666_0000778 Ga0495666_0000778_3731_4768 319
66 3300046529 Ga0495652_0095684 Ga0495652_0095684_434_1471 319
67 3300046536 Ga0495587_0001001 Ga0495587_0001001_11392_12429 319
68 3300046543 Ga0495645_0011970 Ga0495645_0011970_1987_3024 319
69 3300046642 Ga0495634_0010602 Ga0495634_0010602_3731_4768 319
70 3300046663 Ga0495635_0010302 Ga0495635_0010302_5061_6098 319
71 3300046665 Ga0495661_0004101 Ga0495661_0004101_1987_3024 319
72 3300046678 Ga0495599_0005104 Ga0495599_0005104_1072_2109 319
73 3300046679 Ga0495623_0044549 Ga0495623_0044549_1607_2644 319
74 3300046680 Ga0495646_0003343 Ga0495646_0003343_1318_2355 319
75 3300046794 Ga0495589_0061038 Ga0495589_0061038_52_1089 319
76 3300047315 Ga0495581_0002933 Ga0495581_0002933_1436_2473 319
77 3300047317 Ga0495604_0023468 Ga0495604_0023468_1993_3030 319
78 3300047322 Ga0495680_0003934 Ga0495680_0003934_1633_2670 319
79 3300047444 Ga0495675_0005193 Ga0495675_0005193_1972_3009 319
80 3300047446 Ga0495679_001011 Ga0495679_001011_4841_5878 319
81 3300047471 Ga0495684_0025796 Ga0495684_0025796_2391_3428 319
82 3300048088 Ga0495602_0034166 Ga0495602_0034166_2092_3129 319
83 3300025298 Ga0209050_1000243 Ga0209050_100024389 320
84 3300025303 Ga0209051_1000004 Ga0209051_1000004178 320
85 3300025304 Ga0209257_1000038 Ga0209257_1000038312 320
86 3300025304 Ga0209257_1000044 Ga0209257_1000044247 320
87 3300028786 Ga0307517_10053847 Ga0307517_100538472 320
88 3300046513 Ga0495616_0057377 Ga0495616_0057377_35_1009 320
89 3300046515 Ga0495620_0027703 Ga0495620_0027703_1464_2468 320
90 3300046519 Ga0495632_0003490 Ga0495632_0003490_6749_7753 320
91 3300046694 Ga0495649_0002140 Ga0495649_0002140_10752_11756 320
92 3300046810 Ga0495660_0134908 Ga0495660_0134908_110_1114 320
93 3300047323 Ga0495683_0012133 Ga0495683_0012133_3531_4505 320
94 3300047323 Ga0495683_0129645 Ga0495683_0129645_193_1167 320
95 3300047443 Ga0495687_000669 Ga0495687_000669_23612_24616 320
96 3300048091 Ga0495626_0048508 Ga0495626_0048508_393_1397 320
97 3300050496 nmdc:mga07m45_852_c1 nmdc:mga07m45_852_c1_196_1200 320
98 iso_pu_bacteria 2643221569 2643860761 320
99 iso_pu_bacteria 2643221594 2643981400 321
100 iso_pu_bacteria 2808606395 2809035313 321
101 3300006353 Ga0075370_10048707 Ga0075370_100487072 322
102 3300046472 Ga0495580_0024392 Ga0495580_0024392_2644_3612 322
103 3300048919 Ga0496116_0012103 Ga0496116_0012103_250_1326 322
104 3300048924 Ga0496121_0023748 Ga0496121_0023748_4642_5739 322
105 3300048925 Ga0496122_0000047 Ga0496122_0000047_120488_121564 322
106 3300048926 Ga0496123_0000077 Ga0496123_0000077_101138_102214 322
107 3300050496 nmdc:mga07m45_2328_c1 nmdc:mga07m45_2328_c1_4200_5201 322
108 3300050496 nmdc:mga07m45_47983_c1 nmdc:mga07m45_47983_c1_812_1798 322
109 iso_pu_bacteria 2808606384 2808970165 322
110 iso_pu_bacteria 2808606390 2809004989 322
111 iso_pu_bacteria 2808606391 2809011871 322
112 3300025303 Ga0209051_1021271 Ga0209051_10212712 323
113 3300025304 Ga0209257_1033281 Ga0209257_10332812 323
114 3300049584 Ga0501068_0111884 Ga0501068_0111884_70_1086 323
115 3300053136 Ga0500559_0017355 Ga0500559_0017355_958_1950 323
116 3300009545 Ga0105237_10000529 Ga0105237_1000052912 324
117 3300010375 Ga0105239_10000802 Ga0105239_1000080214 324
118 3300010375 Ga0105239_10202800 Ga0105239_102028002 324
119 3300013102 Ga0157371_10179997 Ga0157371_101799972 324
120 3300025298 Ga0209050_1029302 Ga0209050_10293022 324
121 3300025914 Ga0207671_10004445 Ga0207671_100044457 324
122 3300025924 Ga0207694_10016057 Ga0207694_100160577 324
123 3300044683 Ga0466965_0039432 Ga0466965_0039432_1242_2270 324
124 3300045049 Ga0466959_0165596 Ga0466959_0165596_450_1478 324
125 3300046492 Ga0495585_0060066 Ga0495585_0060066_228_1223 324
126 3300046660 Ga0495625_0002946 Ga0495625_0002946_13103_14098 324
127 3300048920 Ga0496117_0051605 Ga0496117_0051605_1102_2106 324
128 3300048921 Ga0496118_0011760 Ga0496118_0011760_1550_2554 324
129 3300048922 Ga0496119_0014385 Ga0496119_0014385_3500_4504 324
130 3300048923 Ga0496120_0002913 Ga0496120_0002913_9801_10805 324
131 3300048928 Ga0496125_0000105 Ga0496125_0000105_151505_152509 324
132 3300048929 Ga0496126_0010668 Ga0496126_0010668_8196_9200 324
133 iso_pu_bacteria 2643221621 2644120547 324
134 iso_pu_bacteria 2858950400 2858956274 324
135 iso_pu_bacteria 2881412998 2881415525 324
136 iso_pu_bacteria 2941479691 2941483754 324
137 3300003316 rootH1_10119639 rootH1_101196395 325
138 3300005459 Ga0068867_100000438 Ga0068867_10000043816 325
139 3300005719 Ga0068861_100038301 Ga0068861_1000383013 325
140 3300006358 Ga0068871_100328560 Ga0068871_1003285602 325
141 3300009148 Ga0105243_10002772 Ga0105243_1000277212 325
142 3300009176 Ga0105242_10059141 Ga0105242_100591413 325
143 3300010375 Ga0105239_10387480 Ga0105239_103874802 325
144 3300011119 Ga0105246_10057074 Ga0105246_100570744 325
145 3300013297 Ga0157378_10008823 Ga0157378_100088234 325
146 3300014745 Ga0157377_10000061 Ga0157377_1000006167 325
147 3300025935 Ga0207709_10001164 Ga0207709_1000116415 325
148 3300025960 Ga0207651_10005590 Ga0207651_100055907 325
149 3300026089 Ga0207648_10001306 Ga0207648_1000130614 325
150 3300026118 Ga0207675_100029684 Ga0207675_1000296844 325
151 3300028786 Ga0307517_10005370 Ga0307517_1000537014 325
152 3300028786 Ga0307517_10039830 Ga0307517_100398306 325
153 3300028786 Ga0307517_10105597 Ga0307517_101055972 325
154 3300031456 Ga0307513_10001264 Ga0307513_1000126425 325
155 3300031507 Ga0307509_10153536 Ga0307509_101535361 325
156 3300031616 Ga0307508_10001770 Ga0307508_1000177016 325
157 3300031730 Ga0307516_10044519 Ga0307516_100445193 325
158 3300031730 Ga0307516_10107741 Ga0307516_101077413 325
159 3300033179 Ga0307507_10024680 Ga0307507_100246802 325
160 3300033179 Ga0307507_10067659 Ga0307507_100676592 325
161 3300037312 Ga0395899_0195920 Ga0395899_0195920_406_1392 325
162 3300041512 Ga0451853_1478638 Ga0451853_1478638_69_1070 325
163 3300046454 Ga0495592_0001798 Ga0495592_0001798_5153_6154 325
164 3300046519 Ga0495632_0008001 Ga0495632_0008001_4116_5105 325
165 3300046522 Ga0495643_0057531 Ga0495643_0057531_789_1778 325
166 3300046660 Ga0495625_0003060 Ga0495625_0003060_3727_4728 325
167 3300046680 Ga0495646_0033760 Ga0495646_0033760_2045_3046 325
168 3300046694 Ga0495649_0000446 Ga0495649_0000446_14532_15521 325
169 3300046810 Ga0495660_0005708 Ga0495660_0005708_1490_2479 325
170 3300047443 Ga0495687_000669 Ga0495687_000669_5724_6713 325
171 3300047472 Ga0495686_0002594 Ga0495686_0002594_8335_9453 325
172 3300048904 Ga0496101_0138362 Ga0496101_0138362_29_1015 325
173 3300048905 Ga0496102_0062787 Ga0496102_0062787_750_1736 325
174 3300048909 Ga0496106_0196659 Ga0496106_0196659_266_1252 325
175 3300048910 Ga0496107_0035365 Ga0496107_0035365_1280_2266 325
176 3300048917 Ga0496114_0433087 Ga0496114_0433087_153_1139 325
177 3300049569 Ga0501032_0003715 Ga0501032_0003715_7464_8486 325
178 3300050493 nmdc:mga0k408_64374_c1 nmdc:mga0k408_64374_c1_758_1747 325
179 3300050493 nmdc:mga0k408_98466_c1 nmdc:mga0k408_98466_c1_220_1209 325
180 3300050496 nmdc:mga07m45_1936_c1 nmdc:mga07m45_1936_c1_2035_3024 325
181 3300053134 Ga0500658_0000752 Ga0500658_0000752_4180_5169 325
182 iso_pu_bacteria 642555113 642923276 325
183 3300003792 Ga0055540_1000007 Ga0055540_1000007110 327
184 3300025298 Ga0209050_1000243 Ga0209050_100024374 327
185 3300025303 Ga0209051_1000004 Ga0209051_1000004163 327
186 3300025304 Ga0209257_1000038 Ga0209257_1000038297 327
187 3300025304 Ga0209257_1000044 Ga0209257_1000044262 327
188 iso_pu_bacteria 2513237166 2514050437 327
189 3300001989 JGI24739J22299_10002021 JGI24739J22299_100020214 328
190 3300002067 JGI24735J21928_10026481 JGI24735J21928_100264812 328
191 3300002705 JGI25156J39149_1000035 JGI25156J39149_100003586 328
192 3300002738 JGI25154J39366_1002867 JGI25154J39366_10028673 328
193 3300002741 JGI25157J39369_1000048 JGI25157J39369_100004841 328
194 3300003752 Ga0055539_1000762 Ga0055539_10007624 328
195 3300005367 Ga0070667_100028641 Ga0070667_1000286411 328
196 3300005563 Ga0068855_100020926 Ga0068855_1000209266 328
197 3300005577 Ga0068857_100002571 Ga0068857_1000025716 328
198 3300005578 Ga0068854_100001033 Ga0068854_1000010336 328
199 3300005616 Ga0068852_100155152 Ga0068852_1001551522 328
200 3300009011 Ga0105251_10000029 Ga0105251_1000002982 328
201 3300009093 Ga0105240_10181295 Ga0105240_101812953 328
202 3300009101 Ga0105247_10006795 Ga0105247_100067955 328
203 3300009174 Ga0105241_10130418 Ga0105241_101304184 328
204 3300009551 Ga0105238_10002198 Ga0105238_100021987 328
205 3300010375 Ga0105239_10014860 Ga0105239_100148607 328
206 3300013105 Ga0157369_10194818 Ga0157369_101948182 328
207 3300014497 Ga0182008_10035800 Ga0182008_100358003 328
208 3300015262 Ga0182007_10002025 Ga0182007_100020257 328
209 3300025246 Ga0209646_1000131 Ga0209646_100013140 328
210 3300025250 Ga0209026_1000038 Ga0209026_100003840 328
211 3300025253 Ga0209677_100616 Ga0209677_10061615 328
212 3300025256 Ga0209759_1000031 Ga0209759_100003140 328
213 3300025913 Ga0207695_10351831 Ga0207695_103518311 328
214 3300025924 Ga0207694_10004280 Ga0207694_100042808 328
215 3300025972 Ga0207668_10165347 Ga0207668_101653472 328
216 3300025981 Ga0207640_10005806 Ga0207640_100058064 328
217 3300026078 Ga0207702_10000668 Ga0207702_1000066811 328
218 3300026116 Ga0207674_10010075 Ga0207674_100100755 328
219 3300037418 Ga0395900_0157681 Ga0395900_0157681_1281_2291 328
220 3300046455 Ga0495603_0035083 Ga0495603_0035083_1481_2491 328
221 3300046474 Ga0495605_0005309 Ga0495605_0005309_176_1186 328
222 3300046499 Ga0495594_0008177 Ga0495594_0008177_1598_2608 328
223 3300046513 Ga0495616_0000050 Ga0495616_0000050_4235_5245 328
224 3300046518 Ga0495631_0007077 Ga0495631_0007077_544_1554 328
225 3300046519 Ga0495632_0000155 Ga0495632_0000155_42317_43327 328
226 3300046528 Ga0495642_0000136 Ga0495642_0000136_12724_13734 328
227 3300046530 Ga0495654_0003006 Ga0495654_0003006_3676_4686 328
228 3300046538 Ga0495609_0007621 Ga0495609_0007621_378_1388 328
229 3300046674 Ga0495588_0008533 Ga0495588_0008533_1834_2844 328
230 3300046684 Ga0495669_0000539 Ga0495669_0000539_6083_7093 328
231 3300046691 Ga0495670_0007149 Ga0495670_0007149_2868_3878 328
232 iso_pu_bacteria 2600255067 2600815351 328
233 iso_pu_bacteria 2928084124 2928089839 328
234 3300003322 rootL2_10031964 rootL2_100319644 329
235 3300006237 Ga0097621_100192117 Ga0097621_1001921172 329
236 3300009148 Ga0105243_10046254 Ga0105243_100462543 329
237 3300025735 Ga0207713_1000112 Ga0207713_100011239 329
238 3300025904 Ga0207647_10005249 Ga0207647_100052493 329
239 3300025919 Ga0207657_10002915 Ga0207657_1000291517 329
240 3300025934 Ga0207686_10004133 Ga0207686_100041335 329
241 3300025935 Ga0207709_10013510 Ga0207709_100135102 329
242 3300037471 Ga0395905_0000017 Ga0395905_0000017_44883_45899 329
243 3300037471 Ga0395905_0034149 Ga0395905_0034149_1263_2276 329
244 3300037471 Ga0395905_0079081 Ga0395905_0079081_1767_2777 329
245 3300038443 Ga0395901_0005365 Ga0395901_0005365_8526_9539 329
246 3300042157 Ga0439458_0001430 Ga0439458_0001430_3259_4272 329
247 3300046459 Ga0495629_0011538 Ga0495629_0011538_776_1786 329
248 3300046463 Ga0495653_0014638 Ga0495653_0014638_4633_5643 329
249 3300046472 Ga0495580_0011756 Ga0495580_0011756_4633_5643 329
250 3300046473 Ga0495582_0009438 Ga0495582_0009438_1771_2781 329
251 3300046476 Ga0495662_0015797 Ga0495662_0015797_2604_3614 329
252 3300046516 Ga0495628_0015247 Ga0495628_0015247_4633_5643 329
253 3300046531 Ga0495665_0006269 Ga0495665_0006269_4630_5640 329
254 3300046535 Ga0495586_0006386 Ga0495586_0006386_3055_4065 329
255 3300046642 Ga0495634_0068162 Ga0495634_0068162_615_1625 329
256 3300046680 Ga0495646_0008804 Ga0495646_0008804_4633_5643 329
257 3300046689 Ga0495613_0031483 Ga0495613_0031483_999_2009 329
258 3300046690 Ga0495624_0010387 Ga0495624_0010387_4633_5643 329
259 3300047319 Ga0495674_0057208 Ga0495674_0057208_1627_2637 329
260 3300047321 Ga0495676_0017091 Ga0495676_0017091_777_1787 329
261 3300047673 Ga0495593_0020161 Ga0495593_0020161_1607_2617 329
262 3300048089 Ga0495614_0013874 Ga0495614_0013874_1771_2781 329
263 3300048919 Ga0496116_0008625 Ga0496116_0008625_708_1730 329
264 3300048920 Ga0496117_0008863 Ga0496117_0008863_550_1599 329
265 3300048921 Ga0496118_0000984 Ga0496118_0000984_1121_2143 329
266 3300048921 Ga0496118_0004178 Ga0496118_0004178_10328_11377 329
267 3300048922 Ga0496119_0077957 Ga0496119_0077957_425_1474 329
268 3300048928 Ga0496125_0022639 Ga0496125_0022639_1672_2721 329
269 iso_pu_bacteria 2562617112 2563056098 329
270 iso_pu_bacteria 2711768613 2713481794 329
271 iso_pu_bacteria 2791355137 2792840982 329
272 iso_pu_bacteria 2900634093 2900634506 329
273 iso_pu_bacteria 2921643360 2921647419 329
274 3300005330 Ga0070690_100002657 Ga0070690_1000026575 330
275 3300005719 Ga0068861_100072516 Ga0068861_1000725164 330
276 3300009176 Ga0105242_10006614 Ga0105242_100066146 330
277 3300013297 Ga0157378_10008465 Ga0157378_100084656 330
278 3300025934 Ga0207686_10003973 Ga0207686_100039736 330
279 3300003354 JGI25160J50197_1000017 JGI25160J50197_100001712 331
280 3300005262 Ga0065165_1001771 Ga0065165_100177116 331
281 3300005344 Ga0070661_100121841 Ga0070661_1001218412 331
282 3300009551 Ga0105238_10138422 Ga0105238_101384222 331
283 3300013104 Ga0157370_10016298 Ga0157370_100162984 331
284 3300013105 Ga0157369_10000044 Ga0157369_100000442 331
285 3300014497 Ga0182008_10080170 Ga0182008_100801701 331
286 3300015262 Ga0182007_10042048 Ga0182007_100420481 331
287 3300025228 Ga0209672_100104 Ga0209672_10010448 331
288 3300025302 Ga0207426_1000107 Ga0207426_1000107166 331
289 3300046472 Ga0495580_0012761 Ga0495580_0012761_915_1937 331
290 3300046474 Ga0495605_0002175 Ga0495605_0002175_3385_4407 331
291 3300046506 Ga0495583_0002799 Ga0495583_0002799_7529_8551 331
292 3300046524 Ga0495648_0010037 Ga0495648_0010037_4810_5832 331
293 3300046526 Ga0495666_0070109 Ga0495666_0070109_329_1351 331
294 3300047319 Ga0495674_0001915 Ga0495674_0001915_15767_16789 331
295 3300047320 Ga0495672_0012013 Ga0495672_0012013_3388_4410 331
296 3300047443 Ga0495687_011117 Ga0495687_011117_1886_2908 331
297 3300047469 Ga0495673_0010803 Ga0495673_0010803_3269_4291 331
298 3300048903 Ga0496100_0000185 Ga0496100_0000185_14687_15709 331
299 3300048904 Ga0496101_0000266 Ga0496101_0000266_21994_23016 331
300 3300048905 Ga0496102_0000616 Ga0496102_0000616_21994_23016 331
301 3300048906 Ga0496103_0000720 Ga0496103_0000720_13430_14452 331
302 3300048907 Ga0496104_0041971 Ga0496104_0041971_3183_4205 331
303 3300048908 Ga0496105_0045002 Ga0496105_0045002_2545_3567 331
304 3300048920 Ga0496117_0001052 Ga0496117_0001052_26848_27870 331
305 3300048921 Ga0496118_0001357 Ga0496118_0001357_21994_23016 331
306 3300048923 Ga0496120_0046832 Ga0496120_0046832_983_2005 331
307 3300048924 Ga0496121_0003098 Ga0496121_0003098_17127_18149 331
308 3300048924 Ga0496121_0054644 Ga0496121_0054644_1340_2362 331
309 3300003784 Ga0055534_1000014 Ga0055534_1000014132 332
310 3300003790 Ga0055528_1000213 Ga0055528_100021313 332
311 3300005288 Ga0065714_10068760 Ga0065714_100687603 332
312 3300006186 Ga0075369_10080019 Ga0075369_100800191 332
313 3300006353 Ga0075370_10000465 Ga0075370_100004659 332
314 3300006353 Ga0075370_10019921 Ga0075370_100199212 332
315 3300006948 Ga0099826_10002752 Ga0099826_100027528 332
316 3300013100 Ga0157373_10000985 Ga0157373_100009857 332
317 3300014497 Ga0182008_10000350 Ga0182008_1000035022 332
318 3300015261 Ga0182006_1000400 Ga0182006_100040014 332
319 3300025292 Ga0209676_1020461 Ga0209676_10204612 332
320 3300046660 Ga0495625_0030992 Ga0495625_0030992_2741_3784 332
321 3300050496 nmdc:mga07m45_6070_c1 nmdc:mga07m45_6070_c1_2435_3478 332
322 3300053134 Ga0500658_0000038 Ga0500658_0000038_42102_43145 332
323 3300053139 Ga0500568_0000936 Ga0500568_0000936_3157_4200 332
324 3300001904 JGI24736J21556_1004015 JGI24736J21556_10040152 333
325 3300002067 JGI24735J21928_10000222 JGI24735J21928_100002225 333
326 3300002705 JGI25156J39149_1000322 JGI25156J39149_100032225 333
327 3300002705 JGI25156J39149_1001052 JGI25156J39149_100105210 333
328 3300003322 rootL2_10075036 rootL2_100750363 333
329 3300003756 Ga0055533_1001105 Ga0055533_10011052 333
330 3300005327 Ga0070658_10011281 Ga0070658_100112814 333
331 3300005327 Ga0070658_10126774 Ga0070658_101267742 333
332 3300005366 Ga0070659_100226802 Ga0070659_1002268022 333
333 3300005563 Ga0068855_100005554 Ga0068855_1000055542 333
334 3300005563 Ga0068855_100123453 Ga0068855_1001234532 333
335 3300005614 Ga0068856_100116779 Ga0068856_1001167793 333
336 3300009093 Ga0105240_10000934 Ga0105240_1000093439 333
337 3300009174 Ga0105241_10249957 Ga0105241_102499572 333
338 3300013100 Ga0157373_10005709 Ga0157373_100057099 333
339 3300013104 Ga0157370_10003293 Ga0157370_1000329314 333
340 3300013104 Ga0157370_10031882 Ga0157370_100318822 333
341 3300013105 Ga0157369_10002752 Ga0157369_100027525 333
342 3300013296 Ga0157374_10000039 Ga0157374_1000003976 333
343 3300013296 Ga0157374_10000888 Ga0157374_1000088812 333
344 3300013307 Ga0157372_10001457 Ga0157372_1000145712 333
345 3300025206 Ga0209435_107740 Ga0209435_1077401 333
346 3300025226 Ga0209674_100227 Ga0209674_10022720 333
347 3300025256 Ga0209759_1000008 Ga0209759_1000008404 333
348 3300025256 Ga0209759_1000686 Ga0209759_10006869 333
349 3300025904 Ga0207647_10001050 Ga0207647_100010505 333
350 3300025909 Ga0207705_10027448 Ga0207705_100274482 333
351 3300025909 Ga0207705_10060080 Ga0207705_100600802 333
352 3300025913 Ga0207695_10041395 Ga0207695_100413952 333
353 3300025913 Ga0207695_10123823 Ga0207695_101238232 333
354 3300025949 Ga0207667_10014900 Ga0207667_100149001 333
355 3300025949 Ga0207667_10019777 Ga0207667_100197774 333
356 3300037418 Ga0395900_0079000 Ga0395900_0079000_1413_2414 333
357 3300038443 Ga0395901_0166625 Ga0395901_0166625_969_1970 333
358 3300042005 Ga0439448_0000022 Ga0439448_0000022_800_1801 333
359 3300046463 Ga0495653_0000353 Ga0495653_0000353_1727_2761 333
360 3300046507 Ga0495606_0103765 Ga0495606_0103765_647_1681 333
361 3300046516 Ga0495628_0000967 Ga0495628_0000967_23348_24382 333
362 3300046524 Ga0495648_0033289 Ga0495648_0033289_1741_2742 333
363 3300046648 Ga0495611_0016461 Ga0495611_0016461_73_1107 333
364 3300046680 Ga0495646_0009904 Ga0495646_0009904_1705_2739 333
365 3300046690 Ga0495624_0001623 Ga0495624_0001623_2194_3228 333
366 3300047317 Ga0495604_0001104 Ga0495604_0001104_13444_14478 333
367 3300047322 Ga0495680_0083343 Ga0495680_0083343_1212_2246 333
368 3300047444 Ga0495675_0085851 Ga0495675_0085851_590_1624 333
369 3300047469 Ga0495673_0034465 Ga0495673_0034465_396_1430 333
370 3300048088 Ga0495602_0012548 Ga0495602_0012548_6142_7176 333
371 3300048920 Ga0496117_0004600 Ga0496117_0004600_2387_3412 333
372 3300048920 Ga0496117_0086354 Ga0496117_0086354_698_1720 333
373 3300048921 Ga0496118_0005141 Ga0496118_0005141_9466_10491 333
374 iso_pu_bacteria 2751185846 2753567108 333
375 iso_pu_bacteria 642555113 642621899 333

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

29

87

0.97

PF03466

LysR_substrate

LysR substrate binding domain

112

319

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7trv-assembly1.cif.gz_A crystal structure of the dna-binding domain of the lysr family transcriptional regulator yfba from yersinia pestis 0.9386 27 105
4pzj-assembly1.cif.gz_A-2 1.60 angstrom resolution crystal structure of a transcriptional regulator of the lysr family from eggerthella lenta dsm 2243 0.9377 27 91
7trv-assembly1.cif.gz_B crystal structure of the dna-binding domain of the lysr family transcriptional regulator yfba from yersinia pestis 0.9236 27 108
5x0n-assembly3.cif.gz_F regulatory domain of variant c227s aphb from vibrio vulnificus 0.9043 114 313
5x0n-assembly1.cif.gz_A regulatory domain of variant c227s aphb from vibrio vulnificus 0.9004 116 313
ID Description Score Start End Superfamily
af_P75836_3_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9843 25 108 1.10.10.10
af_P0A9F6_3_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9487 27 105 1.10.10.10
af_P75836_3_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9401 25 108 1.10.10.10
2esnD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9332 27 104 1.10.10.10
af_P75836_90_290_3.40.190.290 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2; 0.9307 112 311 3.40.190.290
ID Description Score Start End GO Terms
AF-A0A380UKQ5-F1-model_v4 deleted 0.9449 186 313
AF-A0A447T6W0-F1-model_v4 D-malate degradation protein R 0.9441 111 317 GO:0003700
GO:0006351
GO:0043565
AF-A0A4U6BBZ3-F1-model_v4 LysR family transcriptional regulator 0.9257 173 314 GO:0003700
GO:0006351
GO:0043565
AF-A0A5N7RZ00-F1-model_v4 LysR family transcriptional regulator 0.9239 27 316 GO:0003700
AF-A0A7Y8DXJ3-F1-model_v4 deleted 0.9195 175 317

Feature Viewer

pLDDT pTM Quality
86.73 0.77 High
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Predicted Structure (AlphaFold2)

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