F428518

General Info

Members Datasets Scaffolds Average Seq Length
379 211 366 230

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8055588893|8055590823
Length 226
Sequence DRLFGILTLLQSKKYLTGERIAERFGISIRTVYRDIRALNEQGIPVGFEPNKGYFVVDGFFLRPVSFSLEEANALLLMENLVTGFADKSIQKHYSSALSKVKAVMRDSQKEKLEYLTISTGFQFPQRLLNEANEHLATLQEAVTARTILDVRYCKADGSESNRRVEPVGLIFYAFSWHLIGWCHLREDYRDFKVSRMVHVQNSGMPFTKTTHPPIADFMNQLPVDY

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2738541283 Pedobacter sp. OK701 Isolate Unclassified
3 2738541302 Pedobacter sp. CF074 Isolate Unclassified
4 2739367651 Pedobacter sp. OK291 Isolate Unclassified
5 2739367656 Pedobacter sp. CF523 Isolate Unclassified
6 2818991437 Pedobacter terrae 518 Isolate Unclassified
7 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
8 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
9 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
10 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
11 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
12 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
13 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
14 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
15 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
16 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
28 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
33 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
34 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
35 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
36 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
37 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
38 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
39 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
40 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
41 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
42 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
43 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
44 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
45 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
46 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
47 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
48 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
49 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
52 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
53 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
54 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
55 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
56 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
57 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
58 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
59 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
60 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
61 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
62 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
63 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
64 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
65 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
66 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
67 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
68 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
69 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
70 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
71 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
72 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
73 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
74 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
75 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
76 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
77 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
78 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
79 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
80 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
81 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
82 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
83 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
84 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
87 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
91 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
92 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
93 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
94 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
95 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
96 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
97 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
98 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
99 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
100 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
101 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
102 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
103 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
106 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
144 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
148 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
149 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
150 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
151 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
152 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
153 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
154 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
155 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
156 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
157 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
158 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
159 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
160 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
161 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
162 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
163 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
164 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
165 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
166 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
167 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
168 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
169 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
170 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
171 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
172 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
173 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
174 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
175 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
176 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
177 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
178 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
179 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
180 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
181 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
182 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
183 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
184 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
185 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
186 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
187 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
191 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
192 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
193 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
194 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
195 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
196 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
197 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
198 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
199 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
200 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
201 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
202 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
203 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
205 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
206 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
207 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
208 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
209 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
210 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
211 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.57
Metatranscriptomes 0
Isolates 3.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.96
Nodule 0
Rhizoplane 1.32
Rhizosphere 90.77
Stem 0
Stem Tuber 0
Unclassified 3.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1001294 3300002773 Bacteria 11203
2 JGI25150J39212_1000025 3300002774 Bacteria 123597
3 JGI25151J46595_10000089 3300003187 Bacteria 123597
4 JGI25153J46596_10002558 3300003215 Bacteria 10429
5 rootL2_10294269 3300003322 Bacteria 2894
6 rootL2_10326589 3300003322 Bacteria 2819
7 rootH1_10085132 3300003323 Bacteria 8035
8 rootH1_10128464 3300003323 Bacteria 5934
9 Ga0055536_1000010 3300003781 Bacteria 304614
10 Ga0055530_10008097 3300003791 Bacteria 4279
11 Ga0065714_10009945 3300005288 Bacteria 2891
12 Ga0065714_10064503 3300005288 Bacteria 46875
13 Ga0065714_10069597 3300005288 Bacteria 4163
14 Ga0065704_10312298 3300005289 Bacteria 866
15 Ga0065712_10069539 3300005290 Bacteria 7085
16 Ga0070658_10729554 3300005327 Bacteria 860
17 Ga0070676_10170301 3300005328 Bacteria 1408
18 Ga0070676_10176429 3300005328 Bacteria 1386
19 Ga0068869_100134898 3300005334 Bacteria 1901
20 Ga0068869_100199137 3300005334 Bacteria 1578
21 Ga0070666_10000152 3300005335 Bacteria 47539
22 Ga0070666_10217258 3300005335 Unclassified 1348
23 Ga0070680_100000078 3300005336 Bacteria 52994
24 Ga0070680_100039127 3300005336 Bacteria 3838
25 Ga0070682_100000632 3300005337 Bacteria 21377
26 Ga0070682_100238723 3300005337 Bacteria 1304
27 Ga0068868_100019857 3300005338 Bacteria 5040
28 Ga0068868_100204021 3300005338 Bacteria 1649
29 Ga0070660_100213009 3300005339 Bacteria 1569
30 Ga0070660_100268950 3300005339 Bacteria 1393
31 Ga0070689_100503878 3300005340 Bacteria 1038
32 Ga0070691_10001554 3300005341 Bacteria 9896
33 Ga0070691_10403820 3300005341 Bacteria 770
34 Ga0070687_100027985 3300005343 Bacteria 2729
35 Ga0070687_100508931 3300005343 Unclassified 812
36 Ga0070668_100049216 3300005347 Bacteria 3243
37 Ga0070668_100160951 3300005347 Bacteria 1821
38 Ga0070668_100286698 3300005347 Unclassified 1377
39 Ga0070669_100007853 3300005353 Bacteria 7625
40 Ga0070675_100006553 3300005354 Bacteria 8945
41 Ga0070675_100571702 3300005354 Bacteria 1023
42 Ga0070671_100022714 3300005355 Bacteria 5125
43 Ga0070674_100131357 3300005356 Bacteria 1867
44 Ga0070673_100030475 3300005364 Bacteria 4037
45 Ga0070673_100051429 3300005364 Bacteria 3227
46 Ga0070688_100002109 3300005365 Bacteria 10033
47 Ga0070688_100458758 3300005365 Bacteria 954
48 Ga0070667_100013529 3300005367 Bacteria 6743
49 Ga0070667_100036849 3300005367 Unclassified 4100
50 Ga0070667_100061163 3300005367 Unclassified 3188
51 Ga0070663_100726110 3300005455 Bacteria 846
52 Ga0070662_100017383 3300005457 Bacteria 4849
53 Ga0070662_100659207 3300005457 Unclassified 883
54 Ga0070681_10000629 3300005458 Bacteria 28953
55 Ga0068867_100071289 3300005459 Unclassified 2599
56 Ga0068867_100148134 3300005459 Unclassified 1841
57 Ga0070685_10106068 3300005466 Unclassified 1723
58 Ga0070685_10505317 3300005466 Bacteria 856
59 Ga0070679_100000099 3300005530 Bacteria 66873
60 Ga0070679_100009495 3300005530 Bacteria 9202
61 Ga0070684_100581904 3300005535 Bacteria 1040
62 Ga0068853_100024906 3300005539 Bacteria 5021
63 Ga0068853_100058126 3300005539 Bacteria 3338
64 Ga0068853_100097764 3300005539 Bacteria 2592
65 Ga0068853_100178460 3300005539 Bacteria 1925
66 Ga0068853_100343561 3300005539 Bacteria 1387
67 Ga0070672_100167424 3300005543 Bacteria 1826
68 Ga0070693_100003884 3300005547 Bacteria 7009
69 Ga0068855_100033806 3300005563 Bacteria 6100
70 Ga0068855_100073456 3300005563 Bacteria 3973
71 Ga0068855_100099823 3300005563 Bacteria 3343
72 Ga0068855_100452390 3300005563 Bacteria 1401
73 Ga0068855_100712464 3300005563 Bacteria 1073
74 Ga0070664_100570633 3300005564 Bacteria 1048
75 Ga0068857_100003505 3300005577 Bacteria 13099
76 Ga0068857_100163855 3300005577 Bacteria 2018
77 Ga0068856_100123536 3300005614 Bacteria 2591
78 Ga0068852_100041825 3300005616 Bacteria 3876
79 Ga0068852_100072539 3300005616 Bacteria 3026
80 Ga0068852_100153310 3300005616 Bacteria 2145
81 Ga0068852_100157187 3300005616 Bacteria 2119
82 Ga0068859_100000026 3300005617 Bacteria 188742
83 Ga0068859_100016032 3300005617 Bacteria 7531
84 Ga0068859_100068027 3300005617 Bacteria 3597
85 Ga0068859_100162435 3300005617 Unclassified 2313
86 Ga0068864_100022942 3300005618 Bacteria 5236
87 Ga0068864_100283782 3300005618 Bacteria 1546
88 Ga0068861_100001965 3300005719 Bacteria 13244
89 Ga0068851_10024984 3300005834 Bacteria 2928
90 Ga0068870_10110014 3300005840 Unclassified 1571
91 Ga0068863_100000852 3300005841 Bacteria 30432
92 Ga0068858_100002202 3300005842 Bacteria 19732
93 Ga0068860_100005629 3300005843 Bacteria 12657
94 Ga0068860_100074356 3300005843 Bacteria 3231
95 Ga0068860_100244416 3300005843 Bacteria 1746
96 Ga0068862_100007183 3300005844 Bacteria 9249
97 Ga0068862_100008113 3300005844 Bacteria 8688
98 Ga0075366_10011946 3300006195 Bacteria 4917
99 Ga0097621_100002552 3300006237 Bacteria 12476
100 Ga0097621_100026508 3300006237 Bacteria 4547
101 Ga0097621_100083109 3300006237 Bacteria 2668
102 Ga0097621_100126914 3300006237 Bacteria 2168
103 Ga0068871_100000133 3300006358 Bacteria 47534
104 Ga0068871_100013331 3300006358 Bacteria 6100
105 Ga0068871_100282494 3300006358 Bacteria 1452
106 Ga0068871_100553459 3300006358 Unclassified 1042
107 Ga0068865_100094309 3300006881 Unclassified 2178
108 Ga0097620_100000026 3300006931 Bacteria 188742
109 Ga0097620_100016032 3300006931 Bacteria 7531
110 Ga0097620_100068028 3300006931 Bacteria 3597
111 Ga0097620_100162430 3300006931 Unclassified 2313
112 Ga0105244_10007851 3300009036 Bacteria 6732
113 Ga0105240_10001256 3300009093 Bacteria 44019
114 Ga0105240_10076238 3300009093 Unclassified 4134
115 Ga0105240_10125226 3300009093 Bacteria 3089
116 Ga0111539_10000891 3300009094 Bacteria 39017
117 Ga0105247_10064992 3300009101 Bacteria 2268
118 Ga0105241_10000056 3300009174 Bacteria 84758
119 Ga0105241_10001448 3300009174 Bacteria 18175
120 Ga0105241_10005289 3300009174 Bacteria 9534
121 Ga0105241_10367597 3300009174 Bacteria 1253
122 Ga0105241_10906291 3300009174 Unclassified 819
123 Ga0105248_10015814 3300009177 Bacteria 8317
124 Ga0105237_10001479 3300009545 Bacteria 30952
125 Ga0105237_10006609 3300009545 Bacteria 12817
126 Ga0105237_10025704 3300009545 Bacteria 6019
127 Ga0105237_10322648 3300009545 Unclassified 1548
128 Ga0105237_10331766 3300009545 Bacteria 1525
129 Ga0105249_10000998 3300009553 Bacteria 25094
130 Ga0105249_10041740 3300009553 Bacteria 4171
131 Ga0105249_10224660 3300009553 Unclassified 1849
132 Ga0105249_10487597 3300009553 Bacteria 1276
133 Ga0105239_10049000 3300010375 Bacteria 4632
134 Ga0105246_10268955 3300011119 Bacteria 1361
135 Ga0105246_10484783 3300011119 Bacteria 1047
136 Ga0157373_10007902 3300013100 Bacteria 7915
137 Ga0157373_10023225 3300013100 Bacteria 4497
138 Ga0157373_10026066 3300013100 Bacteria 4225
139 Ga0157373_10249621 3300013100 Bacteria 1255
140 Ga0157371_10000496 3300013102 Bacteria 47702
141 Ga0157371_10004405 3300013102 Bacteria 12308
142 Ga0157371_10009820 3300013102 Bacteria 7502
143 Ga0157371_10040912 3300013102 Unclassified 3309
144 Ga0157371_10044823 3300013102 Bacteria 3149
145 Ga0157371_10125424 3300013102 Bacteria 1826
146 Ga0157371_10378064 3300013102 Bacteria 1034
147 Ga0157370_10000440 3300013104 Bacteria 51946
148 Ga0157370_10007042 3300013104 Bacteria 12274
149 Ga0157370_10088841 3300013104 Bacteria 2902
150 Ga0157370_10099677 3300013104 Bacteria 2722
151 Ga0157370_10209543 3300013104 Bacteria 1807
152 Ga0157370_10213522 3300013104 Bacteria 1788
153 Ga0157370_10243378 3300013104 Bacteria 1664
154 Ga0157370_10277542 3300013104 Bacteria 1548
155 Ga0157370_10329546 3300013104 Bacteria 1408
156 Ga0157369_10000414 3300013105 Bacteria 56570
157 Ga0157369_10048822 3300013105 Unclassified 4591
158 Ga0157369_10118270 3300013105 Bacteria 2813
159 Ga0157369_10146126 3300013105 Bacteria 2500
160 Ga0157369_10169183 3300013105 Bacteria 2303
161 Ga0157369_10314329 3300013105 Bacteria 1629
162 Ga0157374_10048269 3300013296 Bacteria 3950
163 Ga0157374_10204204 3300013296 Unclassified 1936
164 Ga0157378_10003208 3300013297 Bacteria 14536
165 Ga0157378_10015233 3300013297 Bacteria 6734
166 Ga0157378_10042436 3300013297 Bacteria 4037
167 Ga0163162_10000343 3300013306 Bacteria 42312
168 Ga0163162_10001261 3300013306 Bacteria 23661
169 Ga0163162_10003517 3300013306 Bacteria 14983
170 Ga0163162_10019861 3300013306 Bacteria 6597
171 Ga0163162_10028079 3300013306 Bacteria 5566
172 Ga0163162_10031873 3300013306 Bacteria 5231
173 Ga0157372_10044723 3300013307 Bacteria 4908
174 Ga0157372_10049563 3300013307 Bacteria 4670
175 Ga0157372_10102189 3300013307 Bacteria 3274
176 Ga0157372_10138945 3300013307 Bacteria 2798
177 Ga0157372_10183046 3300013307 Bacteria 2425
178 Ga0157372_10219977 3300013307 Bacteria 2201
179 Ga0157372_10374692 3300013307 Bacteria 1659
180 Ga0157372_10710037 3300013307 Bacteria 1170
181 Ga0157372_10712162 3300013307 Bacteria 1168
182 Ga0157375_10000162 3300013308 Bacteria 63098
183 Ga0163163_10013398 3300014325 Bacteria 7507
184 Ga0163163_10054712 3300014325 Bacteria 3943
185 Ga0163163_10144048 3300014325 Bacteria 2426
186 Ga0163163_10378660 3300014325 Bacteria 1473
187 Ga0157380_10000351 3300014326 Bacteria 27609
188 Ga0182008_10000022 3300014497 Bacteria 207052
189 Ga0182008_10000104 3300014497 Bacteria 65446
190 Ga0182008_10000312 3300014497 Bacteria 38208
191 Ga0157377_10016592 3300014745 Bacteria 3790
192 Ga0157379_10012862 3300014968 Bacteria 7319
193 Ga0157379_10040180 3300014968 Bacteria 4174
194 Ga0157379_10274957 3300014968 Bacteria 1532
195 Ga0157376_10002676 3300014969 Bacteria 12105
196 Ga0157376_10048782 3300014969 Bacteria 3504
197 Ga0157376_10092491 3300014969 Bacteria 2622
198 Ga0157376_10253464 3300014969 Bacteria 1645
199 Ga0157376_10265660 3300014969 Bacteria 1609
200 Ga0157376_10382042 3300014969 Bacteria 1357
201 Ga0182006_1000533 3300015261 Bacteria 28901
202 Ga0182006_1002806 3300015261 Bacteria 9292
203 Ga0182007_10000009 3300015262 Bacteria 316298
204 Ga0183373_1013 3300015682 Bacteria 112340
205 Ga0163161_10000780 3300017792 Bacteria 25031
206 Ga0163161_10002752 3300017792 Bacteria 12497
207 Ga0163161_10038868 3300017792 Unclassified 3414
208 Ga0163161_10058878 3300017792 Bacteria 2793
209 Ga0207425_1000008 3300025245 Bacteria 618024
210 Ga0209129_1000042 3300025258 Bacteria 305537
211 Ga0209676_1000009 3300025292 Bacteria 981719
212 Ga0209025_1000020 3300025294 Bacteria 618024
213 Ga0209758_1000022 3300025297 Bacteria 618024
214 Ga0209050_1000103 3300025298 Bacteria 229225
215 Ga0207655_1010918 3300025728 Bacteria 5461
216 Ga0207710_10089008 3300025900 Bacteria 1442
217 Ga0207680_10000200 3300025903 Bacteria 28917
218 Ga0207647_10203118 3300025904 Bacteria 1146
219 Ga0207645_10107892 3300025907 Bacteria 1801
220 Ga0207643_10043752 3300025908 Bacteria 2528
221 Ga0207654_10003983 3300025911 Bacteria 7436
222 Ga0207654_10005616 3300025911 Bacteria 6342
223 Ga0207654_10325229 3300025911 Bacteria 1052
224 Ga0207707_10000026 3300025912 Bacteria 175026
225 Ga0207707_10000067 3300025912 Bacteria 105764
226 Ga0207707_10389962 3300025912 Bacteria 1196
227 Ga0207707_10490644 3300025912 Bacteria 1048
228 Ga0207695_10008564 3300025913 Bacteria 12782
229 Ga0207695_10017141 3300025913 Bacteria 8443
230 Ga0207695_10052739 3300025913 Unclassified 4258
231 Ga0207671_10000761 3300025914 Bacteria 40954
232 Ga0207671_10009070 3300025914 Bacteria 8361
233 Ga0207671_10029961 3300025914 Bacteria 4061
234 Ga0207671_10115767 3300025914 Bacteria 2044
235 Ga0207671_10159846 3300025914 Bacteria 1744
236 Ga0207660_10000165 3300025917 Bacteria 41631
237 Ga0207660_10025225 3300025917 Bacteria 4033
238 Ga0207662_10038885 3300025918 Bacteria 2788
239 Ga0207662_10585979 3300025918 Bacteria 775
240 Ga0207657_10039102 3300025919 Bacteria 4217
241 Ga0207657_10237999 3300025919 Bacteria 1454
242 Ga0207652_10000109 3300025921 Bacteria 89337
243 Ga0207652_10044367 3300025921 Bacteria 3788
244 Ga0207681_10064337 3300025923 Bacteria 2532
245 Ga0207650_10169705 3300025925 Bacteria 1733
246 Ga0207659_10060884 3300025926 Bacteria 2719
247 Ga0207644_10046175 3300025931 Bacteria 3102
248 Ga0207644_10370556 3300025931 Bacteria 1166
249 Ga0207706_10013637 3300025933 Bacteria 7382
250 Ga0207669_10153767 3300025937 Bacteria 1615
251 Ga0207669_10678368 3300025937 Bacteria 845
252 Ga0207711_10832798 3300025941 Bacteria 859
253 Ga0207689_10003065 3300025942 Bacteria 15394
254 Ga0207689_10047179 3300025942 Unclassified 3558
255 Ga0207679_10734822 3300025945 Unclassified 897
256 Ga0207667_10015521 3300025949 Bacteria 8645
257 Ga0207667_10024953 3300025949 Bacteria 6554
258 Ga0207667_10173109 3300025949 Bacteria 2219
259 Ga0207667_10245483 3300025949 Bacteria 1832
260 Ga0207667_10613520 3300025949 Bacteria 1096
261 Ga0207667_10831564 3300025949 Bacteria 918
262 Ga0207651_10013867 3300025960 Bacteria 4631
263 Ga0207712_10003846 3300025961 Bacteria 9483
264 Ga0207668_10034691 3300025972 Bacteria 3352
265 Ga0207658_10025297 3300025986 Bacteria 4156
266 Ga0207658_10084517 3300025986 Bacteria 2442
267 Ga0207639_10013053 3300026041 Bacteria 5800
268 Ga0207639_10027949 3300026041 Bacteria 4113
269 Ga0207639_10132186 3300026041 Bacteria 2068
270 Ga0207678_10689442 3300026067 Unclassified 899
271 Ga0207641_10000215 3300026088 Bacteria 74812
272 Ga0207641_10012684 3300026088 Bacteria 6909
273 Ga0207648_10000846 3300026089 Bacteria 34542
274 Ga0207648_10090255 3300026089 Bacteria 2677
275 Ga0207648_10262883 3300026089 Bacteria 1540
276 Ga0207676_10021761 3300026095 Bacteria 4707
277 Ga0207676_10211692 3300026095 Bacteria 1720
278 Ga0207676_10806865 3300026095 Bacteria 916
279 Ga0207674_10005767 3300026116 Bacteria 14688
280 Ga0207674_10069903 3300026116 Unclassified 3530
281 Ga0207674_10114835 3300026116 Unclassified 2664
282 Ga0207675_100000422 3300026118 Bacteria 40963
283 Ga0207698_10013937 3300026142 Bacteria 5324
284 Ga0207698_10131855 3300026142 Bacteria 2137
285 Ga0209999_1013113 3300027543 Unclassified 1503
286 Ga0209974_10021167 3300027876 Bacteria 2154
287 Ga0268265_10021956 3300028380 Bacteria 4479
288 Ga0268265_10028937 3300028380 Bacteria 3972
289 Ga0268264_10000801 3300028381 Bacteria 33940
290 Ga0268264_10002100 3300028381 Bacteria 17791
291 Ga0268264_10041297 3300028381 Unclassified 3815
292 Ga0268264_10203019 3300028381 Bacteria 1815
293 Ga0265334_10003636 3300028573 Bacteria 6984
294 Ga0307515_10000380 3300028794 Bacteria 108537
295 Ga0265338_10086968 3300028800 Unclassified 2599
296 Ga0316176_1017053 3300030732 Bacteria 8843
297 Ga0316183_1159766 3300030742 Bacteria 38773
298 Ga0316181_1008766 3300030744 Bacteria 13172
299 Ga0316181_1183982 3300030744 Unclassified 1425
300 Ga0316182_1216574 3300030745 Bacteria 2191
301 Ga0265327_10116149 3300031251 Bacteria 1273
302 Ga0307509_10136016 3300031507 Bacteria 2403
303 Ga0307407_10000006 3300031903 Bacteria 218714
304 Ga0307412_10142763 3300031911 Bacteria 1756
305 Ga0307409_100015425 3300031995 Bacteria 5016
306 Ga0307416_100000058 3300032002 Bacteria 103674
307 Ga0307416_100254449 3300032002 Bacteria 1712
308 Ga0307414_10004885 3300032004 Bacteria 7324
309 Ga0307414_10201159 3300032004 Bacteria 1620
310 Ga0307411_10124533 3300032005 Bacteria 1872
311 Ga0307411_10270717 3300032005 Bacteria 1346
312 Ga0373957_0093703 3300035120 Bacteria 1196
313 Ga0373937_0161580 3300036401 Bacteria 2100
314 Ga0373937_0294888 3300036401 Bacteria 1532
315 Ga0373937_1096699 3300036401 Bacteria 745
316 Ga0395905_0356697 3300037471 Bacteria 1355
317 Ga0451791_0045573 3300041451 Unclassified 1006
318 Ga0439445_0053747 3300042004 Bacteria 1091
319 Ga0439462_0025678 3300042015 Bacteria 1552
320 Ga0439434_0003381 3300042435 Bacteria 4673
321 Ga0453683_0175908 3300044673 Bacteria 1356
322 Ga0453684_0022829 3300044712 Bacteria 9262
323 Ga0451576_0390546 3300045051 Bacteria 1459
324 Ga0495606_0031527 3300046507 Bacteria 3684
325 Ga0495610_0000826 3300046512 Bacteria 28965
326 Ga0495610_0003289 3300046512 Bacteria 12722
327 Ga0495630_0124138 3300046517 Bacteria 1959
328 Ga0495643_0010064 3300046522 Bacteria 5832
329 Ga0495633_0054716 3300046558 Bacteria 1877
330 Ga0495635_0148839 3300046663 Bacteria 1594
331 Ga0495613_0479250 3300046689 Unclassified 840
332 Ga0495672_0057251 3300047320 Bacteria 2265
333 Ga0495684_0106610 3300047471 Bacteria 2117
334 Ga0495686_0024386 3300047472 Bacteria 3976
335 Ga0495686_0144397 3300047472 Bacteria 1402
336 Ga0496100_0029764 3300048903 Unclassified 3381
337 Ga0496104_0801982 3300048907 Unclassified 848
338 Ga0496114_0159563 3300048917 Bacteria 1960
339 Ga0496114_0182193 3300048917 Bacteria 1835
340 Ga0496122_0006031 3300048925 Bacteria 14135
341 Ga0496123_0001642 3300048926 Bacteria 30044
342 Ga0501034_0072100 3300049571 Bacteria 3463
343 Ga0501038_0583373 3300049574 Bacteria 847
344 Ga0501043_0226996 3300049579 Bacteria 1443
345 Ga0501067_0026735 3300049583 Bacteria 3195
346 Ga0501069_0010741 3300049585 Bacteria 4855
347 Ga0501073_0035767 3300049589 Bacteria 3528
348 Ga0501074_0075700 3300049590 Bacteria 2416
349 Ga0501217_052097 3300049661 Bacteria 1073
350 Ga0501223_002697 3300049663 Bacteria 3904
351 Ga0501235_016699 3300049669 Bacteria 1623
352 Ga0501240_009396 3300049673 Bacteria 1276
353 Ga0501245_019928 3300049708 Bacteria 1043
354 Ga0501079_0034068 3300049741 Unclassified 3918
355 Ga0501080_0132396 3300049742 Bacteria 2308
356 Ga0501080_0364124 3300049742 Bacteria 1304
357 Ga0501083_0076995 3300049744 Bacteria 2213
358 Ga0501241_028040 3300049758 Unclassified 1055
359 Ga0501035_0029024 3300049822 Bacteria 5046
360 Ga0501044_0060551 3300049823 Bacteria 3876
361 nmdc:mga08y16_29629_c1 3300050511 Bacteria 5764
362 Ga0495619_0237809 3300053085 Bacteria 1262
363 Ga0500618_011360 3300053125 Bacteria 2364
364 Ga0500568_0000429 3300053139 Bacteria 31597
365 Ga0501084_0008228 3300054114 Bacteria 8603
366 Ga0501082_0060396 3300060353 Bacteria 3264

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037471 Ga0395905_0356697 Ga0395905_0356697_682_1314 210
2 3300049673 Ga0501240_009396 Ga0501240_009396_32_664 210
3 3300053125 Ga0500618_011360 Ga0500618_011360_947_1642 222
4 3300013102 Ga0157371_10040912 Ga0157371_100409121 223
5 3300013307 Ga0157372_10183046 Ga0157372_101830464 223
6 iso_pu_bacteria 2585427687 2586210829 225
7 iso_pu_bacteria 2738541283 2738758276 225
8 iso_pu_bacteria 2738541302 2738854028 225
9 iso_pu_bacteria 2739367651 2739587504 225
10 iso_pu_bacteria 2739367656 2739618109 225
11 iso_pu_bacteria 2818991437 2819545418 225
12 iso_pu_bacteria 2849281842 2849285720 225
13 iso_pu_bacteria 2904445276 2904447903 225
14 iso_pu_bacteria 2910245624 2910248710 225
15 iso_pu_bacteria 2945997725 2945998428 225
16 iso_pu_bacteria 8055588893 8055590823 225
17 3300013102 Ga0157371_10044823 Ga0157371_100448232 227
18 3300049663 Ga0501223_002697 Ga0501223_002697_2794_3477 227
19 3300002773 JGI25152J39213_1001294 JGI25152J39213_10012948 229
20 3300002774 JGI25150J39212_1000025 JGI25150J39212_1000025110 229
21 3300003187 JGI25151J46595_10000089 JGI25151J46595_10000089110 229
22 3300003215 JGI25153J46596_10002558 JGI25153J46596_100025585 229
23 3300003322 rootL2_10294269 rootL2_102942692 229
24 3300003322 rootL2_10326589 rootL2_103265893 229
25 3300003323 rootH1_10085132 rootH1_100851322 229
26 3300003323 rootH1_10128464 rootH1_101284642 229
27 3300003781 Ga0055536_1000010 Ga0055536_10000108 229
28 3300003791 Ga0055530_10008097 Ga0055530_100080973 229
29 3300005288 Ga0065714_10009945 Ga0065714_100099452 229
30 3300005288 Ga0065714_10064503 Ga0065714_1006450334 229
31 3300005288 Ga0065714_10069597 Ga0065714_100695972 229
32 3300005289 Ga0065704_10312298 Ga0065704_103122982 229
33 3300005290 Ga0065712_10069539 Ga0065712_100695395 229
34 3300005327 Ga0070658_10729554 Ga0070658_107295541 229
35 3300005328 Ga0070676_10170301 Ga0070676_101703011 229
36 3300005328 Ga0070676_10176429 Ga0070676_101764292 229
37 3300005334 Ga0068869_100134898 Ga0068869_1001348982 229
38 3300005334 Ga0068869_100199137 Ga0068869_1001991372 229
39 3300005335 Ga0070666_10000152 Ga0070666_1000015238 229
40 3300005335 Ga0070666_10217258 Ga0070666_102172582 229
41 3300005336 Ga0070680_100000078 Ga0070680_10000007848 229
42 3300005336 Ga0070680_100039127 Ga0070680_1000391275 229
43 3300005337 Ga0070682_100000632 Ga0070682_10000063211 229
44 3300005337 Ga0070682_100238723 Ga0070682_1002387232 229
45 3300005338 Ga0068868_100019857 Ga0068868_1000198571 229
46 3300005338 Ga0068868_100204021 Ga0068868_1002040212 229
47 3300005339 Ga0070660_100213009 Ga0070660_1002130092 229
48 3300005339 Ga0070660_100268950 Ga0070660_1002689503 229
49 3300005340 Ga0070689_100503878 Ga0070689_1005038782 229
50 3300005341 Ga0070691_10001554 Ga0070691_100015542 229
51 3300005341 Ga0070691_10403820 Ga0070691_104038201 229
52 3300005343 Ga0070687_100027985 Ga0070687_1000279852 229
53 3300005343 Ga0070687_100508931 Ga0070687_1005089311 229
54 3300005347 Ga0070668_100049216 Ga0070668_1000492164 229
55 3300005347 Ga0070668_100160951 Ga0070668_1001609512 229
56 3300005347 Ga0070668_100286698 Ga0070668_1002866982 229
57 3300005353 Ga0070669_100007853 Ga0070669_1000078536 229
58 3300005354 Ga0070675_100006553 Ga0070675_1000065532 229
59 3300005354 Ga0070675_100571702 Ga0070675_1005717021 229
60 3300005355 Ga0070671_100022714 Ga0070671_1000227142 229
61 3300005356 Ga0070674_100131357 Ga0070674_1001313572 229
62 3300005364 Ga0070673_100030475 Ga0070673_1000304752 229
63 3300005364 Ga0070673_100051429 Ga0070673_1000514295 229
64 3300005365 Ga0070688_100002109 Ga0070688_1000021097 229
65 3300005365 Ga0070688_100458758 Ga0070688_1004587581 229
66 3300005367 Ga0070667_100013529 Ga0070667_1000135295 229
67 3300005367 Ga0070667_100036849 Ga0070667_1000368495 229
68 3300005367 Ga0070667_100061163 Ga0070667_1000611633 229
69 3300005455 Ga0070663_100726110 Ga0070663_1007261101 229
70 3300005457 Ga0070662_100017383 Ga0070662_1000173833 229
71 3300005457 Ga0070662_100659207 Ga0070662_1006592071 229
72 3300005458 Ga0070681_10000629 Ga0070681_1000062924 229
73 3300005459 Ga0068867_100071289 Ga0068867_1000712892 229
74 3300005459 Ga0068867_100148134 Ga0068867_1001481342 229
75 3300005466 Ga0070685_10106068 Ga0070685_101060681 229
76 3300005466 Ga0070685_10505317 Ga0070685_105053172 229
77 3300005530 Ga0070679_100000099 Ga0070679_1000000993 229
78 3300005530 Ga0070679_100009495 Ga0070679_1000094957 229
79 3300005535 Ga0070684_100581904 Ga0070684_1005819042 229
80 3300005539 Ga0068853_100024906 Ga0068853_1000249063 229
81 3300005539 Ga0068853_100058126 Ga0068853_1000581263 229
82 3300005539 Ga0068853_100097764 Ga0068853_1000977642 229
83 3300005539 Ga0068853_100178460 Ga0068853_1001784602 229
84 3300005539 Ga0068853_100343561 Ga0068853_1003435611 229
85 3300005543 Ga0070672_100167424 Ga0070672_1001674243 229
86 3300005547 Ga0070693_100003884 Ga0070693_1000038845 229
87 3300005563 Ga0068855_100033806 Ga0068855_1000338068 229
88 3300005563 Ga0068855_100073456 Ga0068855_1000734562 229
89 3300005563 Ga0068855_100099823 Ga0068855_1000998231 229
90 3300005563 Ga0068855_100452390 Ga0068855_1004523902 229
91 3300005563 Ga0068855_100712464 Ga0068855_1007124641 229
92 3300005564 Ga0070664_100570633 Ga0070664_1005706332 229
93 3300005577 Ga0068857_100003505 Ga0068857_1000035057 229
94 3300005577 Ga0068857_100163855 Ga0068857_1001638552 229
95 3300005614 Ga0068856_100123536 Ga0068856_1001235362 229
96 3300005616 Ga0068852_100041825 Ga0068852_1000418255 229
97 3300005616 Ga0068852_100072539 Ga0068852_1000725392 229
98 3300005616 Ga0068852_100153310 Ga0068852_1001533103 229
99 3300005616 Ga0068852_100157187 Ga0068852_1001571873 229
100 3300005617 Ga0068859_100000026 Ga0068859_10000002625 229
101 3300005617 Ga0068859_100016032 Ga0068859_1000160327 229
102 3300005617 Ga0068859_100068027 Ga0068859_1000680274 229
103 3300005617 Ga0068859_100162435 Ga0068859_1001624353 229
104 3300005618 Ga0068864_100022942 Ga0068864_1000229428 229
105 3300005618 Ga0068864_100283782 Ga0068864_1002837823 229
106 3300005719 Ga0068861_100001965 Ga0068861_10000196513 229
107 3300005834 Ga0068851_10024984 Ga0068851_100249842 229
108 3300005840 Ga0068870_10110014 Ga0068870_101100141 229
109 3300005841 Ga0068863_100000852 Ga0068863_10000085224 229
110 3300005842 Ga0068858_100002202 Ga0068858_1000022027 229
111 3300005843 Ga0068860_100005629 Ga0068860_10000562914 229
112 3300005843 Ga0068860_100074356 Ga0068860_1000743561 229
113 3300005843 Ga0068860_100244416 Ga0068860_1002444163 229
114 3300005844 Ga0068862_100007183 Ga0068862_1000071835 229
115 3300005844 Ga0068862_100008113 Ga0068862_1000081138 229
116 3300006195 Ga0075366_10011946 Ga0075366_100119463 229
117 3300006237 Ga0097621_100002552 Ga0097621_1000025528 229
118 3300006237 Ga0097621_100026508 Ga0097621_1000265082 229
119 3300006237 Ga0097621_100083109 Ga0097621_1000831093 229
120 3300006237 Ga0097621_100126914 Ga0097621_1001269142 229
121 3300006358 Ga0068871_100000133 Ga0068871_10000013348 229
122 3300006358 Ga0068871_100013331 Ga0068871_1000133315 229
123 3300006358 Ga0068871_100282494 Ga0068871_1002824941 229
124 3300006358 Ga0068871_100553459 Ga0068871_1005534592 229
125 3300006881 Ga0068865_100094309 Ga0068865_1000943094 229
126 3300006931 Ga0097620_100000026 Ga0097620_10000002625 229
127 3300006931 Ga0097620_100016032 Ga0097620_1000160327 229
128 3300006931 Ga0097620_100068028 Ga0097620_1000680284 229
129 3300006931 Ga0097620_100162430 Ga0097620_1001624303 229
130 3300009036 Ga0105244_10007851 Ga0105244_100078513 229
131 3300009093 Ga0105240_10001256 Ga0105240_1000125624 229
132 3300009093 Ga0105240_10076238 Ga0105240_100762383 229
133 3300009093 Ga0105240_10125226 Ga0105240_101252262 229
134 3300009094 Ga0111539_10000891 Ga0111539_1000089124 229
135 3300009101 Ga0105247_10064992 Ga0105247_100649921 229
136 3300009174 Ga0105241_10000056 Ga0105241_100000564 229
137 3300009174 Ga0105241_10001448 Ga0105241_100014486 229
138 3300009174 Ga0105241_10005289 Ga0105241_100052895 229
139 3300009174 Ga0105241_10367597 Ga0105241_103675972 229
140 3300009174 Ga0105241_10906291 Ga0105241_109062911 229
141 3300009177 Ga0105248_10015814 Ga0105248_100158149 229
142 3300009545 Ga0105237_10001479 Ga0105237_1000147912 229
143 3300009545 Ga0105237_10006609 Ga0105237_100066095 229
144 3300009545 Ga0105237_10025704 Ga0105237_100257046 229
145 3300009545 Ga0105237_10322648 Ga0105237_103226483 229
146 3300009545 Ga0105237_10331766 Ga0105237_103317662 229
147 3300009553 Ga0105249_10000998 Ga0105249_1000099820 229
148 3300009553 Ga0105249_10041740 Ga0105249_100417405 229
149 3300009553 Ga0105249_10224660 Ga0105249_102246602 229
150 3300009553 Ga0105249_10487597 Ga0105249_104875971 229
151 3300010375 Ga0105239_10049000 Ga0105239_100490005 229
152 3300011119 Ga0105246_10268955 Ga0105246_102689552 229
153 3300011119 Ga0105246_10484783 Ga0105246_104847831 229
154 3300013100 Ga0157373_10007902 Ga0157373_100079025 229
155 3300013100 Ga0157373_10023225 Ga0157373_100232255 229
156 3300013100 Ga0157373_10026066 Ga0157373_100260665 229
157 3300013100 Ga0157373_10249621 Ga0157373_102496211 229
158 3300013102 Ga0157371_10000496 Ga0157371_100004967 229
159 3300013102 Ga0157371_10004405 Ga0157371_1000440513 229
160 3300013102 Ga0157371_10009820 Ga0157371_100098202 229
161 3300013102 Ga0157371_10125424 Ga0157371_101254241 229
162 3300013102 Ga0157371_10378064 Ga0157371_103780642 229
163 3300013104 Ga0157370_10000440 Ga0157370_1000044030 229
164 3300013104 Ga0157370_10007042 Ga0157370_100070427 229
165 3300013104 Ga0157370_10088841 Ga0157370_100888413 229
166 3300013104 Ga0157370_10099677 Ga0157370_100996772 229
167 3300013104 Ga0157370_10209543 Ga0157370_102095432 229
168 3300013104 Ga0157370_10213522 Ga0157370_102135223 229
169 3300013104 Ga0157370_10243378 Ga0157370_102433782 229
170 3300013104 Ga0157370_10277542 Ga0157370_102775422 229
171 3300013104 Ga0157370_10329546 Ga0157370_103295461 229
172 3300013105 Ga0157369_10000414 Ga0157369_1000041443 229
173 3300013105 Ga0157369_10048822 Ga0157369_100488223 229
174 3300013105 Ga0157369_10118270 Ga0157369_101182704 229
175 3300013105 Ga0157369_10146126 Ga0157369_101461263 229
176 3300013105 Ga0157369_10169183 Ga0157369_101691832 229
177 3300013105 Ga0157369_10314329 Ga0157369_103143293 229
178 3300013296 Ga0157374_10048269 Ga0157374_100482695 229
179 3300013296 Ga0157374_10204204 Ga0157374_102042043 229
180 3300013297 Ga0157378_10003208 Ga0157378_100032083 229
181 3300013297 Ga0157378_10015233 Ga0157378_100152335 229
182 3300013297 Ga0157378_10042436 Ga0157378_100424364 229
183 3300013306 Ga0163162_10000343 Ga0163162_100003435 229
184 3300013306 Ga0163162_10001261 Ga0163162_1000126111 229
185 3300013306 Ga0163162_10003517 Ga0163162_1000351713 229
186 3300013306 Ga0163162_10019861 Ga0163162_100198612 229
187 3300013306 Ga0163162_10028079 Ga0163162_100280796 229
188 3300013306 Ga0163162_10031873 Ga0163162_100318735 229
189 3300013307 Ga0157372_10044723 Ga0157372_100447233 229
190 3300013307 Ga0157372_10049563 Ga0157372_100495631 229
191 3300013307 Ga0157372_10102189 Ga0157372_101021894 229
192 3300013307 Ga0157372_10138945 Ga0157372_101389454 229
193 3300013307 Ga0157372_10219977 Ga0157372_102199775 229
194 3300013307 Ga0157372_10374692 Ga0157372_103746923 229
195 3300013307 Ga0157372_10710037 Ga0157372_107100372 229
196 3300013307 Ga0157372_10712162 Ga0157372_107121622 229
197 3300013308 Ga0157375_10000162 Ga0157375_1000016230 229
198 3300014325 Ga0163163_10013398 Ga0163163_100133983 229
199 3300014325 Ga0163163_10054712 Ga0163163_100547125 229
200 3300014325 Ga0163163_10144048 Ga0163163_101440483 229
201 3300014325 Ga0163163_10378660 Ga0163163_103786602 229
202 3300014326 Ga0157380_10000351 Ga0157380_1000035123 229
203 3300014497 Ga0182008_10000022 Ga0182008_1000002257 229
204 3300014497 Ga0182008_10000104 Ga0182008_100001048 229
205 3300014497 Ga0182008_10000312 Ga0182008_100003124 229
206 3300014745 Ga0157377_10016592 Ga0157377_100165922 229
207 3300014968 Ga0157379_10012862 Ga0157379_100128624 229
208 3300014968 Ga0157379_10040180 Ga0157379_100401802 229
209 3300014968 Ga0157379_10274957 Ga0157379_102749571 229
210 3300014969 Ga0157376_10002676 Ga0157376_100026763 229
211 3300014969 Ga0157376_10048782 Ga0157376_100487823 229
212 3300014969 Ga0157376_10092491 Ga0157376_100924913 229
213 3300014969 Ga0157376_10253464 Ga0157376_102534641 229
214 3300014969 Ga0157376_10265660 Ga0157376_102656602 229
215 3300014969 Ga0157376_10382042 Ga0157376_103820422 229
216 3300015261 Ga0182006_1000533 Ga0182006_100053322 229
217 3300015261 Ga0182006_1002806 Ga0182006_10028062 229
218 3300015262 Ga0182007_10000009 Ga0182007_100000097 229
219 3300015682 Ga0183373_1013 Ga0183373_10137 229
220 3300017792 Ga0163161_10000780 Ga0163161_1000078021 229
221 3300017792 Ga0163161_10002752 Ga0163161_100027526 229
222 3300017792 Ga0163161_10038868 Ga0163161_100388682 229
223 3300017792 Ga0163161_10058878 Ga0163161_100588783 229
224 3300025245 Ga0207425_1000008 Ga0207425_1000008529 229
225 3300025258 Ga0209129_1000042 Ga0209129_1000042264 229
226 3300025292 Ga0209676_1000009 Ga0209676_1000009865 229
227 3300025294 Ga0209025_1000020 Ga0209025_1000020529 229
228 3300025297 Ga0209758_1000022 Ga0209758_1000022529 229
229 3300025298 Ga0209050_1000103 Ga0209050_10001038 229
230 3300025728 Ga0207655_1010918 Ga0207655_10109182 229
231 3300025900 Ga0207710_10089008 Ga0207710_100890082 229
232 3300025903 Ga0207680_10000200 Ga0207680_1000020032 229
233 3300025904 Ga0207647_10203118 Ga0207647_102031181 229
234 3300025907 Ga0207645_10107892 Ga0207645_101078923 229
235 3300025908 Ga0207643_10043752 Ga0207643_100437524 229
236 3300025911 Ga0207654_10003983 Ga0207654_100039834 229
237 3300025911 Ga0207654_10005616 Ga0207654_100056165 229
238 3300025911 Ga0207654_10325229 Ga0207654_103252291 229
239 3300025912 Ga0207707_10000026 Ga0207707_1000002667 229
240 3300025912 Ga0207707_10000067 Ga0207707_1000006768 229
241 3300025912 Ga0207707_10389962 Ga0207707_103899621 229
242 3300025912 Ga0207707_10490644 Ga0207707_104906441 229
243 3300025913 Ga0207695_10008564 Ga0207695_1000856410 229
244 3300025913 Ga0207695_10017141 Ga0207695_100171412 229
245 3300025913 Ga0207695_10052739 Ga0207695_100527395 229
246 3300025914 Ga0207671_10000761 Ga0207671_1000076120 229
247 3300025914 Ga0207671_10009070 Ga0207671_100090704 229
248 3300025914 Ga0207671_10029961 Ga0207671_100299613 229
249 3300025914 Ga0207671_10115767 Ga0207671_101157672 229
250 3300025914 Ga0207671_10159846 Ga0207671_101598462 229
251 3300025917 Ga0207660_10000165 Ga0207660_100001653 229
252 3300025917 Ga0207660_10025225 Ga0207660_100252253 229
253 3300025918 Ga0207662_10038885 Ga0207662_100388852 229
254 3300025918 Ga0207662_10585979 Ga0207662_105859791 229
255 3300025919 Ga0207657_10039102 Ga0207657_100391024 229
256 3300025919 Ga0207657_10237999 Ga0207657_102379993 229
257 3300025921 Ga0207652_10000109 Ga0207652_1000010912 229
258 3300025921 Ga0207652_10044367 Ga0207652_100443672 229
259 3300025923 Ga0207681_10064337 Ga0207681_100643372 229
260 3300025925 Ga0207650_10169705 Ga0207650_101697053 229
261 3300025926 Ga0207659_10060884 Ga0207659_100608842 229
262 3300025931 Ga0207644_10046175 Ga0207644_100461752 229
263 3300025931 Ga0207644_10370556 Ga0207644_103705562 229
264 3300025933 Ga0207706_10013637 Ga0207706_100136371 229
265 3300025937 Ga0207669_10153767 Ga0207669_101537672 229
266 3300025937 Ga0207669_10678368 Ga0207669_106783681 229
267 3300025941 Ga0207711_10832798 Ga0207711_108327981 229
268 3300025942 Ga0207689_10003065 Ga0207689_1000306514 229
269 3300025942 Ga0207689_10047179 Ga0207689_100471793 229
270 3300025945 Ga0207679_10734822 Ga0207679_107348221 229
271 3300025949 Ga0207667_10015521 Ga0207667_1001552110 229
272 3300025949 Ga0207667_10024953 Ga0207667_100249537 229
273 3300025949 Ga0207667_10173109 Ga0207667_101731091 229
274 3300025949 Ga0207667_10245483 Ga0207667_102454831 229
275 3300025949 Ga0207667_10613520 Ga0207667_106135202 229
276 3300025949 Ga0207667_10831564 Ga0207667_108315641 229
277 3300025960 Ga0207651_10013867 Ga0207651_100138674 229
278 3300025961 Ga0207712_10003846 Ga0207712_100038466 229
279 3300025972 Ga0207668_10034691 Ga0207668_100346912 229
280 3300025986 Ga0207658_10025297 Ga0207658_100252975 229
281 3300025986 Ga0207658_10084517 Ga0207658_100845171 229
282 3300026041 Ga0207639_10013053 Ga0207639_100130534 229
283 3300026041 Ga0207639_10027949 Ga0207639_100279492 229
284 3300026041 Ga0207639_10132186 Ga0207639_101321862 229
285 3300026067 Ga0207678_10689442 Ga0207678_106894421 229
286 3300026088 Ga0207641_10000215 Ga0207641_1000021560 229
287 3300026088 Ga0207641_10012684 Ga0207641_100126843 229
288 3300026089 Ga0207648_10000846 Ga0207648_1000084623 229
289 3300026089 Ga0207648_10090255 Ga0207648_100902552 229
290 3300026089 Ga0207648_10262883 Ga0207648_102628832 229
291 3300026095 Ga0207676_10021761 Ga0207676_100217618 229
292 3300026095 Ga0207676_10211692 Ga0207676_102116921 229
293 3300026095 Ga0207676_10806865 Ga0207676_108068652 229
294 3300026116 Ga0207674_10005767 Ga0207674_1000576710 229
295 3300026116 Ga0207674_10069903 Ga0207674_100699034 229
296 3300026116 Ga0207674_10114835 Ga0207674_101148353 229
297 3300026118 Ga0207675_100000422 Ga0207675_10000042218 229
298 3300026142 Ga0207698_10013937 Ga0207698_100139371 229
299 3300026142 Ga0207698_10131855 Ga0207698_101318552 229
300 3300027543 Ga0209999_1013113 Ga0209999_10131132 229
301 3300027876 Ga0209974_10021167 Ga0209974_100211674 229
302 3300028380 Ga0268265_10021956 Ga0268265_100219563 229
303 3300028380 Ga0268265_10028937 Ga0268265_100289372 229
304 3300028381 Ga0268264_10000801 Ga0268264_1000080119 229
305 3300028381 Ga0268264_10002100 Ga0268264_100021002 229
306 3300028381 Ga0268264_10041297 Ga0268264_100412972 229
307 3300028381 Ga0268264_10203019 Ga0268264_102030192 229
308 3300028573 Ga0265334_10003636 Ga0265334_100036368 229
309 3300028794 Ga0307515_10000380 Ga0307515_1000038016 229
310 3300028800 Ga0265338_10086968 Ga0265338_100869683 229
311 3300030732 Ga0316176_1017053 Ga0316176_10170536 229
312 3300030742 Ga0316183_1159766 Ga0316183_115976624 229
313 3300030744 Ga0316181_1008766 Ga0316181_10087666 229
314 3300030744 Ga0316181_1183982 Ga0316181_11839821 229
315 3300030745 Ga0316182_1216574 Ga0316182_12165742 229
316 3300031251 Ga0265327_10116149 Ga0265327_101161492 229
317 3300031507 Ga0307509_10136016 Ga0307509_101360164 229
318 3300031903 Ga0307407_10000006 Ga0307407_100000067 229
319 3300031911 Ga0307412_10142763 Ga0307412_101427632 229
320 3300031995 Ga0307409_100015425 Ga0307409_1000154253 229
321 3300032002 Ga0307416_100000058 Ga0307416_10000005887 229
322 3300032002 Ga0307416_100254449 Ga0307416_1002544491 229
323 3300032004 Ga0307414_10004885 Ga0307414_100048856 229
324 3300032004 Ga0307414_10201159 Ga0307414_102011592 229
325 3300032005 Ga0307411_10124533 Ga0307411_101245333 229
326 3300032005 Ga0307411_10270717 Ga0307411_102707172 229
327 3300035120 Ga0373957_0093703 Ga0373957_0093703_114_803 229
328 3300036401 Ga0373937_0161580 Ga0373937_0161580_1162_1851 229
329 3300036401 Ga0373937_0294888 Ga0373937_0294888_649_1338 229
330 3300036401 Ga0373937_1096699 Ga0373937_1096699_20_709 229
331 3300041451 Ga0451791_0045573 Ga0451791_0045573_53_742 229
332 3300042004 Ga0439445_0053747 Ga0439445_0053747_16_705 229
333 3300042015 Ga0439462_0025678 Ga0439462_0025678_103_792 229
334 3300042435 Ga0439434_0003381 Ga0439434_0003381_2447_3136 229
335 3300044673 Ga0453683_0175908 Ga0453683_0175908_286_975 229
336 3300044712 Ga0453684_0022829 Ga0453684_0022829_5046_5735 229
337 3300045051 Ga0451576_0390546 Ga0451576_0390546_596_1285 229
338 3300046507 Ga0495606_0031527 Ga0495606_0031527_1289_1978 229
339 3300046512 Ga0495610_0000826 Ga0495610_0000826_7282_7971 229
340 3300046512 Ga0495610_0003289 Ga0495610_0003289_7870_8559 229
341 3300046517 Ga0495630_0124138 Ga0495630_0124138_1032_1721 229
342 3300046522 Ga0495643_0010064 Ga0495643_0010064_2387_3076 229
343 3300046558 Ga0495633_0054716 Ga0495633_0054716_316_1005 229
344 3300046663 Ga0495635_0148839 Ga0495635_0148839_370_1059 229
345 3300046689 Ga0495613_0479250 Ga0495613_0479250_72_761 229
346 3300047320 Ga0495672_0057251 Ga0495672_0057251_1051_1740 229
347 3300047471 Ga0495684_0106610 Ga0495684_0106610_1188_1877 229
348 3300047472 Ga0495686_0024386 Ga0495686_0024386_2639_3328 229
349 3300047472 Ga0495686_0144397 Ga0495686_0144397_69_758 229
350 3300048903 Ga0496100_0029764 Ga0496100_0029764_1144_1833 229
351 3300048907 Ga0496104_0801982 Ga0496104_0801982_13_702 229
352 3300048917 Ga0496114_0159563 Ga0496114_0159563_1220_1909 229
353 3300048917 Ga0496114_0182193 Ga0496114_0182193_748_1437 229
354 3300048925 Ga0496122_0006031 Ga0496122_0006031_13358_14047 229
355 3300048926 Ga0496123_0001642 Ga0496123_0001642_24922_25611 229
356 3300049571 Ga0501034_0072100 Ga0501034_0072100_567_1322 229
357 3300049574 Ga0501038_0583373 Ga0501038_0583373_67_822 229
358 3300049579 Ga0501043_0226996 Ga0501043_0226996_578_1333 229
359 3300049583 Ga0501067_0026735 Ga0501067_0026735_162_917 229
360 3300049585 Ga0501069_0010741 Ga0501069_0010741_79_834 229
361 3300049589 Ga0501073_0035767 Ga0501073_0035767_1833_2588 229
362 3300049590 Ga0501074_0075700 Ga0501074_0075700_712_1467 229
363 3300049661 Ga0501217_052097 Ga0501217_052097_205_984 229
364 3300049669 Ga0501235_016699 Ga0501235_016699_308_997 229
365 3300049708 Ga0501245_019928 Ga0501245_019928_114_893 229
366 3300049741 Ga0501079_0034068 Ga0501079_0034068_2654_3409 229
367 3300049742 Ga0501080_0132396 Ga0501080_0132396_208_963 229
368 3300049742 Ga0501080_0364124 Ga0501080_0364124_567_1256 229
369 3300049744 Ga0501083_0076995 Ga0501083_0076995_264_1019 229
370 3300049758 Ga0501241_028040 Ga0501241_028040_54_743 229
371 3300049822 Ga0501035_0029024 Ga0501035_0029024_1354_2043 229
372 3300049823 Ga0501044_0060551 Ga0501044_0060551_1307_2062 229
373 3300050511 nmdc:mga08y16_29629_c1 nmdc:mga08y16_29629_c1_62_751 229
374 3300053085 Ga0495619_0237809 Ga0495619_0237809_95_784 229
375 3300053139 Ga0500568_0000429 Ga0500568_0000429_9727_10416 229
376 3300054114 Ga0501084_0008228 Ga0501084_0008228_4376_5131 229
377 3300060353 Ga0501082_0060396 Ga0501082_0060396_218_973 229
378 iso_pu_bacteria 2842722452 2842724704 229
379 iso_pu_bacteria 2842909656 2842911800 229

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08279

HTH_11

HTH domain

2

55

0.96

PF08220

HTH_DeoR

DeoR-like helix-turn-helix domain

2

46

0.94

PF13280

WYL

WYL domain

134

225

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ewn-assembly1.cif.gz_B ecoli biotin repressor with co-repressor analog 0.9562 6 60
8f8u-assembly1.cif.gz_B bifunctional ligase/repressor bira from klebsiella pneumoniae (domain swapped dimer) 0.9485 5 60
8fi3-assembly1.cif.gz_A bifunctional ligase/repressor bira from klebsiella pneumoniae complexed with biotin (domain swapped dimer) 0.9438 5 60
1bib-assembly1.cif.gz_A the e. coli biotin holoenzyme synthetase(slash)bio repressor crystal structure delineates the biotin and dna-binding domains 0.9434 7 60
2w25-assembly1.cif.gz_B crystal structure of glu104ala mutant 0.9262 5 47
ID Description Score Start End Superfamily
4a0zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9867 3 44 1.10.10.10
4a0yA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9832 1 44 1.10.10.10
4a12C01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9642 1 44 1.10.10.10
4a12A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9638 1 44 1.10.10.10
4a12D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9613 1 44 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A531KQ40-F1-model_v4 deleted 0.965 140 211
AF-A0A6N6MTN7-F1-model_v4 Uncharacterized protein 0.9601 149 206
AF-A0A7V9FQY0-F1-model_v4 WYL domain-containing protein 0.9582 139 209
AF-G9PV77-F1-model_v4 deleted 0.9557 139 206
AF-A0A357MLL6-F1-model_v4 WYL domain-containing protein 0.9427 148 210

Feature Viewer

pLDDT pTM Quality
87.43 0.63 Medium
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Predicted Structure (AlphaFold2)

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