F428798

General Info

Members Datasets Scaffolds Average Seq Length
380 188 760 505

Family's Representative Sequence

Representative Sequence 3300049583|Ga0501067_0021237|Ga0501067_0021237_973_2616
Length 547
Sequence MNASSLGISPVYADRPGLAGCHARQLALDDGVTVRRMAGMQIPLDRDKAVPLARQIQAHLERLIAERLLAPGVKLPATRELAQSLGVNRATVALAYEELVAAGWARAHVGQGTFVAGPPDGVSVAGAEAASAPPINWSGLLSRSARIVEADAERARSVAPRVSGQSLISFAGGMPDSGLFPTDAFRRVLNEVVRDEGEALLQYYPVGGYPPLRRYLASYLLRFVLEARPEEILIVNGSQQGFDLIARTLLDPGDAVAIEQPTYPRAMQVFRSFGAQLVPVDRDDAGPRVELFQRVLERHAPKMFYCQPSAHNPTGLTMRREVGVRLLAAAARHQVPIVEDGFDGSLYYGERPPGPLKALDRDGVVIYIGTFSKILFPGLRLGWLVAPPPIAERLQAAKQLADLHTSALIQAAVHRFCERKLLDRHVVRVAAEYGRRRAVLLGALKRRMPEDVTWTEPQGGFSLLLTLPSGLDAGVLLPRAVERGVAFTPGAAFWVSDAGERTLRLSFSAVTAAQIEEGVKRLAEVIKSARREPTRRDGLERVAAPLV

Samples

Sample ID Description Type Environment
1 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
106 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
107 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
108 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
121 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
122 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
127 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
160 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
161 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
162 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
163 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
164 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
165 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
166 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
167 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
168 2671180694 Paenibacillus sp. A3 Isolate Unclassified
169 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
170 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
171 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
172 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
173 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
174 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
175 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
176 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
177 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
178 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
179 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
180 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
181 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
182 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
183 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
184 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
185 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
186 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
187 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
188 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.84
Metatranscriptomes 0.26
Isolates 7.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.79
Nodule 0.26
Rhizoplane 0.53
Rhizosphere 93.42
Stem 0
Stem Tuber 0
Unclassified 4.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501067_0021237 3300049583 Bacteria 3592
2 Ga0065704_10071168 3300005289 Bacteria 12703
3 Ga0070680_100000065 3300005336 Bacteria 55815
4 Ga0070680_100059337 3300005336 Bacteria 3129
5 Ga0068868_100107171 3300005338 Bacteria 2267
6 Ga0070687_100009925 3300005343 Bacteria 4095
7 Ga0070692_10002585 3300005345 Bacteria 7054
8 Ga0070675_100056822 3300005354 Bacteria 3226
9 Ga0070659_100000169 3300005366 Bacteria 50438
10 Ga0070694_100006435 3300005444 Bacteria 7128
11 Ga0070694_100058792 3300005444 Bacteria 2617
12 Ga0070708_100008089 3300005445 Bacteria 8431
13 Ga0070708_100008999 3300005445 Bacteria 8046
14 Ga0070708_100034681 3300005445 Bacteria 4391
15 Ga0070708_100046609 3300005445 Bacteria 3825
16 Ga0070708_100091669 3300005445 Bacteria 2768
17 Ga0070663_100015989 3300005455 Bacteria 4858
18 Ga0070662_100020129 3300005457 Bacteria 4540
19 Ga0070681_10000731 3300005458 Bacteria 27148
20 Ga0068867_100082445 3300005459 Bacteria 2426
21 Ga0070706_100008368 3300005467 Bacteria 9640
22 Ga0070706_100013972 3300005467 Bacteria 7417
23 Ga0070706_100018891 3300005467 Bacteria 6357
24 Ga0070706_100029653 3300005467 Bacteria 5041
25 Ga0070706_100030553 3300005467 Bacteria 4966
26 Ga0070706_100064000 3300005467 Bacteria 3399
27 Ga0070707_100014267 3300005468 Bacteria 7449
28 Ga0070707_100015942 3300005468 Bacteria 7054
29 Ga0070707_100081381 3300005468 Unclassified 3126
30 Ga0070707_100171177 3300005468 Unclassified 2116
31 Ga0070698_100002527 3300005471 Bacteria 20148
32 Ga0070698_100006864 3300005471 Bacteria 12329
33 Ga0070698_100013383 3300005471 Bacteria 8683
34 Ga0070699_100004711 3300005518 Bacteria 12063
35 Ga0070699_100009809 3300005518 Bacteria 8286
36 Ga0070699_100021956 3300005518 Bacteria 5499
37 Ga0070699_100025207 3300005518 Bacteria 5129
38 Ga0070699_100033749 3300005518 Bacteria 4422
39 Ga0070699_100040354 3300005518 Bacteria 4041
40 Ga0070684_100057728 3300005535 Bacteria 3390
41 Ga0070697_100006857 3300005536 Bacteria 8846
42 Ga0070697_100006881 3300005536 Bacteria 8837
43 Ga0070697_100029085 3300005536 Bacteria 4429
44 Ga0070697_100029213 3300005536 Bacteria 4418
45 Ga0070697_100040428 3300005536 Bacteria 3773
46 Ga0070697_100167912 3300005536 Bacteria 1856
47 Ga0068853_100036370 3300005539 Bacteria 4186
48 Ga0070672_100067425 3300005543 Bacteria 2835
49 Ga0070695_100003297 3300005545 Bacteria 9433
50 Ga0070695_100007051 3300005545 Bacteria 6662
51 Ga0070695_100076332 3300005545 Unclassified 2207
52 Ga0070696_100012914 3300005546 Bacteria 5608
53 Ga0070665_100021406 3300005548 Bacteria 6504
54 Ga0070704_100035388 3300005549 Bacteria 3394
55 Ga0070704_100067269 3300005549 Bacteria 2587
56 Ga0068855_100015265 3300005563 Bacteria 9245
57 Ga0068857_100031419 3300005577 Bacteria 4692
58 Ga0068854_100003384 3300005578 Bacteria 9939
59 Ga0068859_100115406 3300005617 Bacteria 2750
60 Ga0068861_100002754 3300005719 Bacteria 11526
61 Ga0068870_10000862 3300005840 Bacteria 11850
62 Ga0068863_100050586 3300005841 Bacteria 3938
63 Ga0068858_100012936 3300005842 Bacteria 7868
64 Ga0068860_100017033 3300005843 Bacteria 7083
65 Ga0068860_100076194 3300005843 Bacteria 3190
66 Ga0068862_100009164 3300005844 Bacteria 8196
67 Ga0068862_100078003 3300005844 Bacteria 2869
68 Ga0068862_100079749 3300005844 Bacteria 2838
69 Ga0081455_10045409 3300005937 Bacteria 3822
70 Ga0081538_10011129 3300005981 Bacteria 7312
71 Ga0081538_10016513 3300005981 Bacteria 5655
72 Ga0081538_10023346 3300005981 Bacteria 4449
73 Ga0081538_10068416 3300005981 Bacteria 1974
74 Ga0081540_1027106 3300005983 Bacteria 3254
75 Ga0081539_10000092 3300005985 Bacteria 208968
76 Ga0070716_100005959 3300006173 Bacteria 5931
77 Ga0070712_100005995 3300006175 Bacteria 7519
78 Ga0075428_100000436 3300006844 Bacteria 41529
79 Ga0075428_100001425 3300006844 Bacteria 25476
80 Ga0075428_100085692 3300006844 Bacteria 3436
81 Ga0075428_100124587 3300006844 Bacteria 2805
82 Ga0075430_100000002 3300006846 Bacteria 150510
83 Ga0075430_100004567 3300006846 Bacteria 11652
84 Ga0075430_100004571 3300006846 Bacteria 11649
85 Ga0075430_100064553 3300006846 Bacteria 3076
86 Ga0075431_100001143 3300006847 Bacteria 23854
87 Ga0075431_100001932 3300006847 Bacteria 19742
88 Ga0075431_100004273 3300006847 Bacteria 13990
89 Ga0075431_100005337 3300006847 Bacteria 12678
90 Ga0075431_100006431 3300006847 Bacteria 11663
91 Ga0075431_100013306 3300006847 Bacteria 8315
92 Ga0075431_100039591 3300006847 Bacteria 4856
93 Ga0075431_100074873 3300006847 Bacteria 3494
94 Ga0075431_100108805 3300006847 Bacteria 2860
95 Ga0075433_10002207 3300006852 Bacteria 14758
96 Ga0075433_10013754 3300006852 Bacteria 6593
97 Ga0075433_10014169 3300006852 Bacteria 6507
98 Ga0075433_10018652 3300006852 Bacteria 5770
99 Ga0075433_10068351 3300006852 Bacteria 3119
100 Ga0075433_10143856 3300006852 Bacteria 2120
101 Ga0075434_100001051 3300006871 Bacteria 22510
102 Ga0075434_100002356 3300006871 Bacteria 16547
103 Ga0075434_100021270 3300006871 Bacteria 6306
104 Ga0075434_100027581 3300006871 Bacteria 5576
105 Ga0075434_100061618 3300006871 Bacteria 3733
106 Ga0075434_100099200 3300006871 Bacteria 2918
107 Ga0075434_100111006 3300006871 Bacteria 2753
108 Ga0075434_100139643 3300006871 Bacteria 2442
109 Ga0075429_100000460 3300006880 Bacteria 30370
110 Ga0075429_100002418 3300006880 Bacteria 15718
111 Ga0075429_100015673 3300006880 Bacteria 6567
112 Ga0075429_100062243 3300006880 Bacteria 3251
113 Ga0075429_100066183 3300006880 Bacteria 3146
114 Ga0075429_100078460 3300006880 Bacteria 2878
115 Ga0075429_100098887 3300006880 Bacteria 2546
116 Ga0075436_100088405 3300006914 Bacteria 2152
117 Ga0075436_100091610 3300006914 Bacteria 2113
118 Ga0075436_100136871 3300006914 Bacteria 1720
119 Ga0097620_100115410 3300006931 Bacteria 2750
120 Ga0075435_100011573 3300007076 Bacteria 6499
121 Ga0075435_100019557 3300007076 Bacteria 5176
122 Ga0075435_100020646 3300007076 Bacteria 5053
123 Ga0075435_100045603 3300007076 Bacteria 3515
124 Ga0099794_10016712 3300007265 Bacteria 3258
125 Ga0099794_10043722 3300007265 Bacteria 2139
126 Ga0111539_10000557 3300009094 Bacteria 47767
127 Ga0111539_10014763 3300009094 Bacteria 9743
128 Ga0111539_10050982 3300009094 Bacteria 4930
129 Ga0105245_10350999 3300009098 Unclassified 1462
130 Ga0114129_10000053 3300009147 Bacteria 100477
131 Ga0114129_10001149 3300009147 Bacteria 35039
132 Ga0114129_10004275 3300009147 Bacteria 20173
133 Ga0114129_10015052 3300009147 Bacteria 11011
134 Ga0114129_10022145 3300009147 Bacteria 9020
135 Ga0114129_10060196 3300009147 Bacteria 5309
136 Ga0114129_10063802 3300009147 Bacteria 5142
137 Ga0114129_10116194 3300009147 Bacteria 3687
138 Ga0114129_10190351 3300009147 Bacteria 2786
139 Ga0114129_10242269 3300009147 Bacteria 2424
140 Ga0114129_10302518 3300009147 Bacteria 2131
141 Ga0114129_10403484 3300009147 Bacteria 1801
142 Ga0105243_10092156 3300009148 Bacteria 2497
143 Ga0105241_10001622 3300009174 Bacteria 17146
144 Ga0105249_10065854 3300009553 Bacteria 3334
145 Ga0157369_10015968 3300013105 Bacteria 8448
146 Ga0163162_10036702 3300013306 Bacteria 4887
147 Ga0157375_10074080 3300013308 Bacteria 3425
148 Ga0163163_10013390 3300014325 Bacteria 7508
149 Ga0209784_100072 3300025224 Bacteria 149587
150 Ga0209675_1005658 3300025291 Bacteria 5167
151 Ga0207653_10000554 3300025885 Bacteria 13697
152 Ga0207645_10012160 3300025907 Bacteria 5846
153 Ga0207684_10000242 3300025910 Bacteria 81735
154 Ga0207684_10001521 3300025910 Bacteria 24854
155 Ga0207684_10024445 3300025910 Bacteria 5150
156 Ga0207684_10134517 3300025910 Unclassified 2122
157 Ga0207684_10178447 3300025910 Unclassified 1831
158 Ga0207707_10000034 3300025912 Bacteria 152677
159 Ga0207693_10010300 3300025915 Bacteria 7587
160 Ga0207657_10000066 3300025919 Bacteria 98663
161 Ga0207649_10001774 3300025920 Bacteria 12339
162 Ga0207652_10000245 3300025921 Bacteria 56703
163 Ga0207646_10033493 3300025922 Bacteria 4648
164 Ga0207646_10040094 3300025922 Unclassified 4213
165 Ga0207646_10043603 3300025922 Bacteria 4027
166 Ga0207646_10090538 3300025922 Bacteria 2739
167 Ga0207646_10149628 3300025922 Bacteria 2105
168 Ga0207650_10005088 3300025925 Bacteria 8979
169 Ga0207690_10016489 3300025932 Bacteria 4495
170 Ga0207706_10020126 3300025933 Bacteria 5996
171 Ga0207706_10029278 3300025933 Unclassified 4917
172 Ga0207709_10043019 3300025935 Bacteria 2721
173 Ga0207691_10134352 3300025940 Bacteria 2184
174 Ga0207689_10000153 3300025942 Bacteria 59635
175 Ga0207689_10022323 3300025942 Bacteria 5321
176 Ga0207689_10025422 3300025942 Bacteria 4963
177 Ga0207679_10001070 3300025945 Bacteria 17432
178 Ga0207667_10000790 3300025949 Bacteria 41185
179 Ga0207640_10002816 3300025981 Bacteria 9327
180 Ga0207677_10085980 3300026023 Bacteria 2272
181 Ga0207703_10018921 3300026035 Bacteria 5381
182 Ga0207678_10002493 3300026067 Bacteria 16750
183 Ga0207708_10015525 3300026075 Bacteria 5713
184 Ga0207702_10000483 3300026078 Bacteria 44845
185 Ga0207641_10138242 3300026088 Bacteria 2195
186 Ga0207648_10000169 3300026089 Bacteria 67635
187 Ga0207648_10091703 3300026089 Bacteria 2656
188 Ga0207674_10000050 3300026116 Bacteria 116782
189 Ga0207674_10048528 3300026116 Bacteria 4345
190 Ga0207675_100011318 3300026118 Bacteria 8350
191 Ga0209981_1000808 3300027378 Bacteria 3953
192 Ga0209995_1000387 3300027471 Bacteria 6868
193 Ga0209968_1000959 3300027526 Bacteria 4456
194 Ga0209999_1004213 3300027543 Unclassified 2591
195 Ga0209971_1000070 3300027682 Bacteria 31653
196 Ga0209966_1000680 3300027695 Bacteria 7395
197 Ga0209998_10000126 3300027717 Bacteria 29860
198 Ga0209974_10000121 3300027876 Bacteria 23101
199 Ga0207428_10000033 3300027907 Bacteria 232081
200 Ga0207428_10000054 3300027907 Bacteria 175237
201 Ga0207428_10108161 3300027907 Bacteria 2142
202 Ga0268265_10017586 3300028380 Unclassified 4938
203 Ga0265762_1000455 3300030760 Bacteria 7079
204 Ga0307406_10023915 3300031901 Bacteria 3643
205 Ga0307416_100060452 3300032002 Bacteria 3086
206 Ga0307416_100178983 3300032002 Bacteria 1985
207 Ga0307411_10049509 3300032005 Bacteria 2731
208 Ga0373940_0003092 3300035088 Bacteria 3346
209 Ga0373941_0008055 3300035115 Bacteria 2605
210 Ga0373961_0005566 3300035241 Bacteria 3026
211 Ga0373931_0022362 3300035691 Bacteria 3182
212 Ga0395899_0112580 3300037312 Bacteria 1955
213 Ga0395900_0001747 3300037418 Bacteria 25001
214 Ga0395900_0150260 3300037418 Bacteria 2380
215 Ga0395898_0003002 3300037466 Bacteria 19130
216 Ga0395901_0002895 3300038443 Bacteria 17324
217 Ga0439448_0004198 3300042005 Bacteria 4057
218 Ga0451577_0003499 3300042876 Bacteria 17445
219 Ga0453683_0019755 3300044673 Bacteria 4312
220 Ga0453684_0062840 3300044712 Bacteria 4753
221 Ga0451576_0008536 3300045051 Bacteria 12011
222 Ga0451576_0011630 3300045051 Bacteria 9971
223 Ga0451576_0048455 3300045051 Unclassified 4462
224 Ga0451576_0219211 3300045051 Unclassified 1986
225 Ga0495580_0001185 3300046472 Bacteria 22935
226 Ga0495586_0042488 3300046535 Bacteria 2448
227 Ga0495659_0033091 3300046664 Bacteria 1813
228 Ga0495660_0036345 3300046810 Bacteria 2748
229 Ga0496112_0167739 3300048915 Bacteria 2161
230 Ga0496116_0018772 3300048919 Bacteria 5315
231 Ga0496116_0034353 3300048919 Bacteria 3579
232 Ga0496118_0096863 3300048921 Bacteria 2009
233 Ga0496120_0003991 3300048923 Bacteria 12824
234 Ga0496121_0053427 3300048924 Bacteria 3384
235 Ga0496124_0043793 3300048927 Bacteria 3845
236 Ga0496125_0000883 3300048928 Bacteria 47568
237 Ga0496125_0001865 3300048928 Bacteria 28989
238 Ga0496125_0022056 3300048928 Bacteria 5921
239 Ga0496126_0036888 3300048929 Bacteria 4567
240 Ga0501036_0075056 3300049572 Bacteria 2860
241 Ga0501040_0007217 3300049576 Bacteria 7198
242 Ga0501040_0066771 3300049576 Bacteria 2478
243 Ga0501041_0016587 3300049577 Bacteria 4381
244 Ga0501041_0034310 3300049577 Bacteria 3071
245 Ga0501046_0000084 3300049580 Bacteria 100971
246 Ga0501046_0095273 3300049580 Bacteria 2287
247 Ga0501046_0119154 3300049580 Bacteria 2010
248 Ga0501048_0007511 3300049582 Bacteria 8260
249 Ga0501072_0070530 3300049588 Bacteria 2760
250 Ga0501072_0130218 3300049588 Bacteria 2005
251 Ga0501072_0208514 3300049588 Bacteria 1557
252 Ga0501074_0004755 3300049590 Bacteria 9731
253 Ga0501074_0030662 3300049590 Bacteria 3897
254 Ga0501075_0017399 3300049591 Bacteria 5193
255 Ga0501075_0153696 3300049591 Bacteria 1754
256 Ga0501076_0004543 3300049592 Bacteria 9887
257 Ga0501076_0031615 3300049592 Bacteria 4130
258 Ga0501076_0072517 3300049592 Bacteria 2756
259 Ga0501076_0086647 3300049592 Bacteria 2517
260 Ga0501076_0107769 3300049592 Bacteria 2250
261 Ga0501077_0005720 3300049593 Bacteria 7569
262 Ga0501077_0011470 3300049593 Bacteria 5536
263 Ga0501077_0027523 3300049593 Bacteria 3609
264 Ga0501079_0002073 3300049741 Bacteria 14372
265 Ga0501079_0046474 3300049741 Bacteria 3350
266 Ga0501079_0058250 3300049741 Unclassified 2981
267 Ga0501080_0022486 3300049742 Bacteria 5841
268 Ga0501080_0052873 3300049742 Bacteria 3781
269 Ga0501081_0001187 3300049743 Bacteria 15771
270 Ga0501081_0001447 3300049743 Bacteria 14526
271 Ga0501081_0005445 3300049743 Bacteria 8215
272 Ga0501081_0016469 3300049743 Bacteria 4887
273 Ga0501081_0056625 3300049743 Bacteria 2710
274 Ga0501081_0118253 3300049743 Bacteria 1885
275 Ga0501083_0007029 3300049744 Bacteria 7992
276 Ga0501045_0002792 3300049824 Bacteria 11938
277 Ga0501045_0037423 3300049824 Bacteria 3526
278 Ga0501045_0071091 3300049824 Bacteria 2561
279 Ga0501045_0157278 3300049824 Unclassified 1691
280 nmdc:mga05p37_10726_c1 3300050507 Bacteria 10875
281 nmdc:mga05p37_15583_c1 3300050507 Bacteria 9136
282 nmdc:mga05p37_166550_c1 3300050507 Bacteria 2689
283 nmdc:mga05p37_1775_c1 3300050507 Bacteria 25180
284 nmdc:mga05p37_1956_c1 3300050507 Bacteria 24019
285 nmdc:mga05p37_19588_c1 3300050507 Bacteria 8185
286 nmdc:mga05p37_252662_c1 3300050507 Bacteria 2114
287 nmdc:mga05p37_6146_c1 3300050507 Bacteria 14129
288 nmdc:mga05p37_79769_c1 3300050507 Bacteria 4031
289 nmdc:mga05p37_8523_c1 3300050507 Bacteria 12118
290 nmdc:mga05p37_91952_c1 3300050507 Bacteria 3738
291 nmdc:mga09592_101266_c1 3300050508 Bacteria 2468
292 nmdc:mga09592_1059_c1 3300050508 Bacteria 21817
293 nmdc:mga09592_15352_c1 3300050508 Bacteria 6254
294 nmdc:mga09592_16973_c1 3300050508 Bacteria 5957
295 nmdc:mga09592_1734_c1 3300050508 Bacteria 17553
296 nmdc:mga09592_32777_c1 3300050508 Bacteria 4331
297 nmdc:mga09592_49294_c1 3300050508 Bacteria 3550
298 nmdc:mga09592_56_c1 3300050508 Bacteria 62143
299 nmdc:mga09592_6184_c2 3300050508 Bacteria 9102
300 nmdc:mga0qj67_1008_c1 3300050509 Bacteria 19443
301 nmdc:mga0qj67_22625_c1 3300050509 Bacteria 4829
302 nmdc:mga0qj67_42046_c1 3300050509 Bacteria 3597
303 nmdc:mga0qj67_4943_c1 3300050509 Bacteria 9687
304 nmdc:mga06r32_132_c1 3300050510 Bacteria 54848
305 nmdc:mga06r32_136629_c1 3300050510 Bacteria 2426
306 nmdc:mga06r32_17495_c1 3300050510 Bacteria 6543
307 nmdc:mga06r32_21610_c1 3300050510 Bacteria 5942
308 nmdc:mga06r32_361_c1 3300050510 Bacteria 38128
309 nmdc:mga06r32_45311_c1 3300050510 Bacteria 4192
310 nmdc:mga06r32_5132_c1 3300050510 Bacteria 11778
311 nmdc:mga06r32_65254_c1 3300050510 Bacteria 3511
312 nmdc:mga06r32_68968_c1 3300050510 Bacteria 3417
313 nmdc:mga06r32_72526_c1 3300050510 Bacteria 3334
314 nmdc:mga08y16_114554_c1 3300050511 Bacteria 2807
315 nmdc:mga08y16_7654_c1 3300050511 Bacteria 11306
316 nmdc:mga08y16_800_c1 3300050511 Bacteria 30094
317 nmdc:mga0n895_11826_c1 3300050512 Bacteria 7805
318 nmdc:mga0n895_1304_c1 3300050512 Bacteria 18453
319 nmdc:mga0n895_137020_c1 3300050512 Unclassified 2475
320 nmdc:mga0n895_14276_c1 3300050512 Bacteria 7207
321 nmdc:mga0n895_15419_c1 3300050512 Bacteria 6967
322 nmdc:mga0n895_167808_c1 3300050512 Bacteria 2227
323 nmdc:mga0n895_20164_c1 3300050512 Bacteria 6212
324 nmdc:mga0n895_26_c1 3300050512 Bacteria 89958
325 nmdc:mga0rr50_179_c1 3300050513 Bacteria 34229
326 nmdc:mga0rr50_227047_c1 3300050513 Bacteria 1544
327 nmdc:mga0rr50_42948_c1 3300050513 Bacteria 3305
328 nmdc:mga0rr50_50376_c1 3300050513 Bacteria 3085
329 nmdc:mga0rr50_9745_c1 3300050513 Bacteria 6062
330 nmdc:mga08x19_119527_c1 3300050514 Bacteria 1765
331 nmdc:mga08x19_18026_c1 3300050514 Bacteria 3640
332 nmdc:mga08x19_78361_c1 3300050514 Bacteria 2166
333 nmdc:mga08x19_7871_c1 3300050514 Bacteria 6331
334 nmdc:mga0a205_14587_c1 3300050515 Bacteria 7334
335 nmdc:mga0a205_1808_c1 3300050515 Bacteria 17870
336 nmdc:mga0a205_190396_c1 3300050515 Bacteria 1944
337 nmdc:mga0a205_21241_c1 3300050515 Bacteria 6140
338 nmdc:mga0a205_55512_c1 3300050515 Bacteria 3826
339 nmdc:mga0a205_7787_c1 3300050515 Bacteria 9728
340 nmdc:mga0a205_79642_c1 3300050515 Bacteria 3166
341 nmdc:mga0a205_797_c1 3300050515 Bacteria 25599
342 Ga0500568_0001393 3300053139 Bacteria 15682
343 Ga0501084_0000139 3300054114 Bacteria 54829
344 Ga0501084_0007349 3300054114 Bacteria 9076
345 Ga0501084_0007454 3300054114 Bacteria 9018
346 Ga0501084_0008107 3300054114 Bacteria 8655
347 Ga0501084_0051107 3300054114 Bacteria 3459
348 Ga0501082_0003568 3300060353 Bacteria 13582
349 Ga0501082_0065670 3300060353 Unclassified 3125
350 Ga0530510_0150045 3300061734 Bacteria 1721
351 2512638054 2512564013 Bacteria 6286191
352 2524187846 2524023129 Bacteria 6762600
353 2550904752 2548877040 Bacteria 7507281
354 2571530759 2571042143 Bacteria 6986194
355 2573036723 2571042588 Bacteria 5045676
356 2578335826 2576861424 Bacteria 5270569
357 2580933788 2579778775 Bacteria 5360914
358 2601639649 2600255286 Bacteria 5390125
359 2621274018 2619619294 Bacteria 5575484
360 2673822184 2671180694 Bacteria 7506943
361 2723603631 2721755693 Bacteria 6126117
362 2728532295 2728368933 Bacteria 7044283
363 2802435865 2802428803 Bacteria 5806948
364 2857467496 2857465823 Bacteria 6772595
365 2881640732 2881636855 Bacteria 5205297
366 2889279561 2889276214 Bacteria 5979355
367 2915601480 2915597211 Bacteria 6475886
368 2915608907 2915606848 Bacteria 6032732
369 2929186653 2929183550 Bacteria 6377511
370 2938655192 2938649242 Bacteria 7118381
371 2968564403 2968558590 Bacteria 6956864
372 2971408253 2971403814 Bacteria 7370929
373 2971514796 2971511577 Bacteria 5404012
374 2980180903 2980176882 Bacteria 5397533
375 2988228786 2988225383 Bacteria 7221625
376 2996635163 2996632988 Bacteria 6921523
377 2996710709 2996706504 Bacteria 5757485
378 648169926 648028048 Bacteria 5394884
379 8054466683 8054465665 Bacteria 7323556
380 8057977782 8057977335 Bacteria 5694872
381 Ga0501067_0021237
382 Ga0065704_10071168
383 Ga0070680_100000065
384 Ga0070680_100059337
385 Ga0068868_100107171
386 Ga0070687_100009925
387 Ga0070692_10002585
388 Ga0070675_100056822
389 Ga0070659_100000169
390 Ga0070694_100006435
391 Ga0070694_100058792
392 Ga0070708_100008089
393 Ga0070708_100008999
394 Ga0070708_100034681
395 Ga0070708_100046609
396 Ga0070708_100091669
397 Ga0070663_100015989
398 Ga0070662_100020129
399 Ga0070681_10000731
400 Ga0068867_100082445
401 Ga0070706_100008368
402 Ga0070706_100013972
403 Ga0070706_100018891
404 Ga0070706_100029653
405 Ga0070706_100030553
406 Ga0070706_100064000
407 Ga0070707_100014267
408 Ga0070707_100015942
409 Ga0070707_100081381
410 Ga0070707_100171177
411 Ga0070698_100002527
412 Ga0070698_100006864
413 Ga0070698_100013383
414 Ga0070699_100004711
415 Ga0070699_100009809
416 Ga0070699_100021956
417 Ga0070699_100025207
418 Ga0070699_100033749
419 Ga0070699_100040354
420 Ga0070684_100057728
421 Ga0070697_100006857
422 Ga0070697_100006881
423 Ga0070697_100029085
424 Ga0070697_100029213
425 Ga0070697_100040428
426 Ga0070697_100167912
427 Ga0068853_100036370
428 Ga0070672_100067425
429 Ga0070695_100003297
430 Ga0070695_100007051
431 Ga0070695_100076332
432 Ga0070696_100012914
433 Ga0070665_100021406
434 Ga0070704_100035388
435 Ga0070704_100067269
436 Ga0068855_100015265
437 Ga0068857_100031419
438 Ga0068854_100003384
439 Ga0068859_100115406
440 Ga0068861_100002754
441 Ga0068870_10000862
442 Ga0068863_100050586
443 Ga0068858_100012936
444 Ga0068860_100017033
445 Ga0068860_100076194
446 Ga0068862_100009164
447 Ga0068862_100078003
448 Ga0068862_100079749
449 Ga0081455_10045409
450 Ga0081538_10011129
451 Ga0081538_10016513
452 Ga0081538_10023346
453 Ga0081538_10068416
454 Ga0081540_1027106
455 Ga0081539_10000092
456 Ga0070716_100005959
457 Ga0070712_100005995
458 Ga0075428_100000436
459 Ga0075428_100001425
460 Ga0075428_100085692
461 Ga0075428_100124587
462 Ga0075430_100000002
463 Ga0075430_100004567
464 Ga0075430_100004571
465 Ga0075430_100064553
466 Ga0075431_100001143
467 Ga0075431_100001932
468 Ga0075431_100004273
469 Ga0075431_100005337
470 Ga0075431_100006431
471 Ga0075431_100013306
472 Ga0075431_100039591
473 Ga0075431_100074873
474 Ga0075431_100108805
475 Ga0075433_10002207
476 Ga0075433_10013754
477 Ga0075433_10014169
478 Ga0075433_10018652
479 Ga0075433_10068351
480 Ga0075433_10143856
481 Ga0075434_100001051
482 Ga0075434_100002356
483 Ga0075434_100021270
484 Ga0075434_100027581
485 Ga0075434_100061618
486 Ga0075434_100099200
487 Ga0075434_100111006
488 Ga0075434_100139643
489 Ga0075429_100000460
490 Ga0075429_100002418
491 Ga0075429_100015673
492 Ga0075429_100062243
493 Ga0075429_100066183
494 Ga0075429_100078460
495 Ga0075429_100098887
496 Ga0075436_100088405
497 Ga0075436_100091610
498 Ga0075436_100136871
499 Ga0097620_100115410
500 Ga0075435_100011573
501 Ga0075435_100019557
502 Ga0075435_100020646
503 Ga0075435_100045603
504 Ga0099794_10016712
505 Ga0099794_10043722
506 Ga0111539_10000557
507 Ga0111539_10014763
508 Ga0111539_10050982
509 Ga0105245_10350999
510 Ga0114129_10000053
511 Ga0114129_10001149
512 Ga0114129_10004275
513 Ga0114129_10015052
514 Ga0114129_10022145
515 Ga0114129_10060196
516 Ga0114129_10063802
517 Ga0114129_10116194
518 Ga0114129_10190351
519 Ga0114129_10242269
520 Ga0114129_10302518
521 Ga0114129_10403484
522 Ga0105243_10092156
523 Ga0105241_10001622
524 Ga0105249_10065854
525 Ga0157369_10015968
526 Ga0163162_10036702
527 Ga0157375_10074080
528 Ga0163163_10013390
529 Ga0209784_100072
530 Ga0209675_1005658
531 Ga0207653_10000554
532 Ga0207645_10012160
533 Ga0207684_10000242
534 Ga0207684_10001521
535 Ga0207684_10024445
536 Ga0207684_10134517
537 Ga0207684_10178447
538 Ga0207707_10000034
539 Ga0207693_10010300
540 Ga0207657_10000066
541 Ga0207649_10001774
542 Ga0207652_10000245
543 Ga0207646_10033493
544 Ga0207646_10040094
545 Ga0207646_10043603
546 Ga0207646_10090538
547 Ga0207646_10149628
548 Ga0207650_10005088
549 Ga0207690_10016489
550 Ga0207706_10020126
551 Ga0207706_10029278
552 Ga0207709_10043019
553 Ga0207691_10134352
554 Ga0207689_10000153
555 Ga0207689_10022323
556 Ga0207689_10025422
557 Ga0207679_10001070
558 Ga0207667_10000790
559 Ga0207640_10002816
560 Ga0207677_10085980
561 Ga0207703_10018921
562 Ga0207678_10002493
563 Ga0207708_10015525
564 Ga0207702_10000483
565 Ga0207641_10138242
566 Ga0207648_10000169
567 Ga0207648_10091703
568 Ga0207674_10000050
569 Ga0207674_10048528
570 Ga0207675_100011318
571 Ga0209981_1000808
572 Ga0209995_1000387
573 Ga0209968_1000959
574 Ga0209999_1004213
575 Ga0209971_1000070
576 Ga0209966_1000680
577 Ga0209998_10000126
578 Ga0209974_10000121
579 Ga0207428_10000033
580 Ga0207428_10000054
581 Ga0207428_10108161
582 Ga0268265_10017586
583 Ga0265762_1000455
584 Ga0307406_10023915
585 Ga0307416_100060452
586 Ga0307416_100178983
587 Ga0307411_10049509
588 Ga0373940_0003092
589 Ga0373941_0008055
590 Ga0373961_0005566
591 Ga0373931_0022362
592 Ga0395899_0112580
593 Ga0395900_0001747
594 Ga0395900_0150260
595 Ga0395898_0003002
596 Ga0395901_0002895
597 Ga0439448_0004198
598 Ga0451577_0003499
599 Ga0453683_0019755
600 Ga0453684_0062840
601 Ga0451576_0008536
602 Ga0451576_0011630
603 Ga0451576_0048455
604 Ga0451576_0219211
605 Ga0495580_0001185
606 Ga0495586_0042488
607 Ga0495659_0033091
608 Ga0495660_0036345
609 Ga0496112_0167739
610 Ga0496116_0018772
611 Ga0496116_0034353
612 Ga0496118_0096863
613 Ga0496120_0003991
614 Ga0496121_0053427
615 Ga0496124_0043793
616 Ga0496125_0000883
617 Ga0496125_0001865
618 Ga0496125_0022056
619 Ga0496126_0036888
620 Ga0501036_0075056
621 Ga0501040_0007217
622 Ga0501040_0066771
623 Ga0501041_0016587
624 Ga0501041_0034310
625 Ga0501046_0000084
626 Ga0501046_0095273
627 Ga0501046_0119154
628 Ga0501048_0007511
629 Ga0501072_0070530
630 Ga0501072_0130218
631 Ga0501072_0208514
632 Ga0501074_0004755
633 Ga0501074_0030662
634 Ga0501075_0017399
635 Ga0501075_0153696
636 Ga0501076_0004543
637 Ga0501076_0031615
638 Ga0501076_0072517
639 Ga0501076_0086647
640 Ga0501076_0107769
641 Ga0501077_0005720
642 Ga0501077_0011470
643 Ga0501077_0027523
644 Ga0501079_0002073
645 Ga0501079_0046474
646 Ga0501079_0058250
647 Ga0501080_0022486
648 Ga0501080_0052873
649 Ga0501081_0001187
650 Ga0501081_0001447
651 Ga0501081_0005445
652 Ga0501081_0016469
653 Ga0501081_0056625
654 Ga0501081_0118253
655 Ga0501083_0007029
656 Ga0501045_0002792
657 Ga0501045_0037423
658 Ga0501045_0071091
659 Ga0501045_0157278
660 nmdc:mga05p37_10726_c1
661 nmdc:mga05p37_15583_c1
662 nmdc:mga05p37_166550_c1
663 nmdc:mga05p37_1775_c1
664 nmdc:mga05p37_1956_c1
665 nmdc:mga05p37_19588_c1
666 nmdc:mga05p37_252662_c1
667 nmdc:mga05p37_6146_c1
668 nmdc:mga05p37_79769_c1
669 nmdc:mga05p37_8523_c1
670 nmdc:mga05p37_91952_c1
671 nmdc:mga09592_101266_c1
672 nmdc:mga09592_1059_c1
673 nmdc:mga09592_15352_c1
674 nmdc:mga09592_16973_c1
675 nmdc:mga09592_1734_c1
676 nmdc:mga09592_32777_c1
677 nmdc:mga09592_49294_c1
678 nmdc:mga09592_56_c1
679 nmdc:mga09592_6184_c2
680 nmdc:mga0qj67_1008_c1
681 nmdc:mga0qj67_22625_c1
682 nmdc:mga0qj67_42046_c1
683 nmdc:mga0qj67_4943_c1
684 nmdc:mga06r32_132_c1
685 nmdc:mga06r32_136629_c1
686 nmdc:mga06r32_17495_c1
687 nmdc:mga06r32_21610_c1
688 nmdc:mga06r32_361_c1
689 nmdc:mga06r32_45311_c1
690 nmdc:mga06r32_5132_c1
691 nmdc:mga06r32_65254_c1
692 nmdc:mga06r32_68968_c1
693 nmdc:mga06r32_72526_c1
694 nmdc:mga08y16_114554_c1
695 nmdc:mga08y16_7654_c1
696 nmdc:mga08y16_800_c1
697 nmdc:mga0n895_11826_c1
698 nmdc:mga0n895_1304_c1
699 nmdc:mga0n895_137020_c1
700 nmdc:mga0n895_14276_c1
701 nmdc:mga0n895_15419_c1
702 nmdc:mga0n895_167808_c1
703 nmdc:mga0n895_20164_c1
704 nmdc:mga0n895_26_c1
705 nmdc:mga0rr50_179_c1
706 nmdc:mga0rr50_227047_c1
707 nmdc:mga0rr50_42948_c1
708 nmdc:mga0rr50_50376_c1
709 nmdc:mga0rr50_9745_c1
710 nmdc:mga08x19_119527_c1
711 nmdc:mga08x19_18026_c1
712 nmdc:mga08x19_78361_c1
713 nmdc:mga08x19_7871_c1
714 nmdc:mga0a205_14587_c1
715 nmdc:mga0a205_1808_c1
716 nmdc:mga0a205_190396_c1
717 nmdc:mga0a205_21241_c1
718 nmdc:mga0a205_55512_c1
719 nmdc:mga0a205_7787_c1
720 nmdc:mga0a205_79642_c1
721 nmdc:mga0a205_797_c1
722 Ga0500568_0001393
723 Ga0501084_0000139
724 Ga0501084_0007349
725 Ga0501084_0007454
726 Ga0501084_0008107
727 Ga0501084_0051107
728 Ga0501082_0003568
729 Ga0501082_0065670
730 Ga0530510_0150045
731 2512638054
732 2524187846
733 2550904752
734 2571530759
735 2573036723
736 2578335826
737 2580933788
738 2601639649
739 2621274018
740 2673822184
741 2723603631
742 2728532295
743 2802435865
744 2857467496
745 2881640732
746 2889279561
747 2915601480
748 2915608907
749 2929186653
750 2938655192
751 2968564403
752 2971408253
753 2971514796
754 2980180903
755 2988228786
756 2996635163
757 2996710709
758 648169926
759 8054466683
760 8057977782

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

52

115

0.98

PF00155

Aminotran_1_2

Aminotransferase class I and II

170

522

0.88

PF12897

Asp_aminotransf

Aspartate amino-transferase

189

537

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wv0-assembly5.cif.gz_I crystal structure of the gntr-hutc family member yvoa from bacillus subtilis 0.9585 5 78
6sbs-assembly1.cif.gz_A ytra from sulfolobus acidocaldarius, a gntr-family transcription factor 0.9463 4 81
2du9-assembly1.cif.gz_A crystal structure of the transcriptional factor from c.glutamicum 0.9443 12 78
2wv0-assembly6.cif.gz_J-3 crystal structure of the gntr-hutc family member yvoa from bacillus subtilis 0.9416 6 77
3c7j-assembly1.cif.gz_A-2 crystal structure of transcriptional regulator (gntr family member) from pseudomonas syringae pv. tomato str. dc3000 0.9399 15 78
ID Description Score Start End Superfamily
af_O06550_14_120_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9782 12 78 1.10.10.10
af_Q2G1P1_1_44_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9688 35 77 1.10.10.10
af_Q2FWW6_10_126_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9666 12 80 1.10.10.10
4u0wA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.959 3 77 1.10.10.10
4u0vA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9564 3 78 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7X8C4W4-F1-model_v4 GntR family transcriptional regulator 0.988 2 80 GO:0003677
GO:0003700
AF-A0A1F8UQL9-F1-model_v4 HTH gntR-type domain-containing protein 0.9855 3 78 GO:0003677
GO:0003700
AF-S1QW90-F1-model_v4 Uncharacterized protein 0.9824 2 78 GO:0003677
GO:0003700
AF-A0A2T2YWB0-F1-model_v4 GntR family transcriptional regulator 0.9813 1 77 GO:0003677
GO:0003700
AF-A0A7X6Q1Y8-F1-model_v4 GntR family transcriptional regulator 0.9803 3 78 GO:0003677
GO:0003700

Map