F429074

General Info

Members Datasets Scaffolds Average Seq Length
381 249 760 549

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0001091|Ga0496122_0001091_37981_39723
Length 580
Sequence LGKVDRVTTAPTPDGGAPERPATPIDAIADSYVATLATLDPMDATVLGIPGHDHEMTDFSPVGHDARADAARATLLALDGTAPADEVDEVTLAAMRERLGLQVELHDAGETLADLNVIASPLQSMRDVFDLMATDGPDAWSTIAQRLNALPEAGAGYAESLRLAASRGRTPAIRQVREALVQAKELADPASSFFTSFVDGPEARAAVAAGGGDALRADLERGAEAARATYAGLVTFLQDELAPQAPQADAAGRDRYALWSRYFLGATVDLDETYRWGLEELDRVVAEQERVAAEIAGPGATVEQAVAALDADPSRRLEGTAALQEWMQATSDAAITALDGVHFSIPDAIRTLECKIAPTQNGGIYYTGPSDDFSRPGRMWWSVPPEVTTFNTWREKTTVYHEGVPGHHLQIGQAVYQRATLNSWRRLACWVSGHGEGWALYAERLMADLGFMDDPGDRLGMLDGQRMRAARVVLDLGVHLGLPAPARWGGGTWDADKAWEFLRANVNMPEQFIRFELNRYLGWPGQAPSYKIGQRIWEQVRDGASASAQARGETFDLREFHARALGMGALPLDVLRGALS

Samples

Sample ID Description Type Environment
1 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
8 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
9 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
10 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
11 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
51 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
84 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
87 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
92 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
93 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
94 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
95 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
106 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
107 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
108 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
109 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
141 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
142 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
143 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
144 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
145 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
146 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
147 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
148 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
149 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
152 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
153 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
154 2643221546 Microbacterium sp. Root53 Isolate Unclassified
155 2643221549 Agromyces sp. Root1464 Isolate Unclassified
156 2643221553 Microbacterium sp. Root553 Isolate Unclassified
157 2643221566 Microbacterium sp. Root166 Isolate Unclassified
158 2643221572 Leifsonia sp. Root60 Isolate Unclassified
159 2643221575 Microbacterium sp. Root61 Isolate Unclassified
160 2643221597 Microbacterium sp. Root180 Isolate Unclassified
161 2643221616 Leifsonia sp. Root227 Isolate Unclassified
162 2643221619 Agromyces sp. Root81 Isolate Unclassified
163 2643221630 Microbacterium sp. Root322 Isolate Unclassified
164 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
165 2643221649 Leifsonia sp. Root4 Isolate Unclassified
166 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
167 2643221679 Angustibacter sp. Root456 Isolate Unclassified
168 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
169 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
170 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
171 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
172 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
173 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
174 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
175 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
176 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
177 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
178 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
179 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
180 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
181 2773857759 Microbacterium sp. 1294 Isolate Unclassified
182 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
183 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
184 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
185 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
186 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
187 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
188 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
189 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
190 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
191 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
192 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
193 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
194 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
195 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
196 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
197 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
198 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
199 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
200 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
201 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
202 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
203 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
204 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
205 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
206 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
207 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
208 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
209 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
210 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
211 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
212 2919069694 Microbacterium sp. 1154 Isolate Unclassified
213 2919395869 Microbacterium resistens 2980 Isolate Unclassified
214 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
215 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
216 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
217 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
218 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
219 2928153084 Leifsonia sp. 563 Isolate Unclassified
220 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
221 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
222 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
223 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
224 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
225 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
226 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
227 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
228 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
229 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
230 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
231 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
232 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
233 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
234 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
235 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
236 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
237 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
238 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
239 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
240 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
241 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
242 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
243 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
244 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
245 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
246 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
247 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
248 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
249 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.7
Metatranscriptomes 1.31
Isolates 25.98

Biome Distribution

Category Percentage (%)
Aerial Root 1.05
Bulb 0
Endosphere 15.22
Nodule 0
Rhizoplane 3.67
Rhizosphere 49.34
Stem 0
Stem Tuber 0.26
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496122_0001091 3300048925 Bacteria 47086
2 JGI25154J39366_1003499 3300002738 Bacteria 3263
3 JGI25164J39214_1001065 3300002772 Bacteria 8148
4 JGI25165J46597_1000883 3300003214 Bacteria 21136
5 Ga0007423J48922_100481 3300003285 Bacteria 4940
6 Ga0006562J51391_1005815 3300003578 Bacteria 7409
7 Ga0006562J51391_1005819 3300003578 Bacteria 3660
8 Ga0006562J51391_1019552 3300003578 Bacteria 3539
9 Ga0055539_1000008 3300003752 Bacteria 537665
10 Ga0055533_1000001 3300003756 Bacteria 1863437
11 Ga0055525_1000489 3300003759 Bacteria 20528
12 Ga0055527_1000001 3300003760 Bacteria 850044
13 Ga0055529_1000018 3300003763 Bacteria 344344
14 Ga0070658_10012566 3300005327 Bacteria 6791
15 Ga0070658_10023487 3300005327 Bacteria 4948
16 Ga0070660_100008054 3300005339 Bacteria 7364
17 Ga0070659_100041717 3300005366 Bacteria 3588
18 Ga0070659_100043420 3300005366 Bacteria 3516
19 Ga0070667_100081914 3300005367 Bacteria 2762
20 Ga0070663_100044578 3300005455 Bacteria 3128
21 Ga0070685_10003179 3300005466 Bacteria 8356
22 Ga0070672_100029934 3300005543 Bacteria 4087
23 Ga0070696_100000964 3300005546 Bacteria 18630
24 Ga0068855_100165490 3300005563 Bacteria 2507
25 Ga0068857_100001238 3300005577 Bacteria 19931
26 Ga0068852_100007071 3300005616 Bacteria 8174
27 Ga0068851_10000003 3300005834 Bacteria 293018
28 Ga0068858_100003053 3300005842 Bacteria 16780
29 Ga0075365_10000716 3300006038 Bacteria 13406
30 Ga0075365_10000907 3300006038 Bacteria 12435
31 Ga0075365_10014815 3300006038 Bacteria 4698
32 Ga0075364_10000555 3300006051 Bacteria 19129
33 Ga0075364_10014520 3300006051 Bacteria 4868
34 Ga0075364_10099775 3300006051 Bacteria 1933
35 Ga0075369_10012669 3300006186 Bacteria 3332
36 Ga0075369_10014371 3300006186 Bacteria 3162
37 Ga0105240_10026377 3300009093 Bacteria 7622
38 Ga0105241_10000330 3300009174 Bacteria 35908
39 Ga0105248_10005259 3300009177 Bacteria 14245
40 Ga0105248_10163180 3300009177 Bacteria 2512
41 Ga0105237_10000751 3300009545 Bacteria 44426
42 Ga0105237_10022802 3300009545 Bacteria 6424
43 Ga0105238_10007970 3300009551 Bacteria 10599
44 Ga0105239_10013744 3300010375 Bacteria 8987
45 Ga0157370_10000369 3300013104 Bacteria 56626
46 Ga0157369_10000408 3300013105 Bacteria 57117
47 Ga0157369_10023160 3300013105 Bacteria 6919
48 Ga0157369_10041561 3300013105 Bacteria 5018
49 Ga0171462_1003 3300013250 Bacteria 853796
50 Ga0157372_10134766 3300013307 Bacteria 2843
51 Ga0157375_10082475 3300013308 Bacteria 3257
52 Ga0163163_10025995 3300014325 Bacteria 5590
53 Ga0157379_10007772 3300014968 Bacteria 9288
54 Ga0206353_10061446 3300020082 Bacteria 4660
55 Ga0209566_100050 3300025225 Bacteria 234653
56 Ga0209674_100001 3300025226 Bacteria 4013750
57 Ga0209672_100006 3300025228 Bacteria 1004497
58 Ga0209147_100988 3300025229 Bacteria 12359
59 Ga0209563_100001 3300025230 Bacteria 4013775
60 Ga0209563_101452 3300025230 Bacteria 6265
61 Ga0207427_100052 3300025231 Bacteria 218228
62 Ga0209437_100813 3300025233 Bacteria 14188
63 Ga0209258_104090 3300025242 Bacteria 2875
64 Ga0209646_1000099 3300025246 Bacteria 180436
65 Ga0209677_100001 3300025253 Bacteria 4013787
66 Ga0209677_104612 3300025253 Bacteria 3899
67 Ga0209148_1000015 3300025254 Bacteria 850103
68 Ga0209148_1000498 3300025254 Bacteria 40127
69 Ga0209233_1000001 3300025261 Bacteria 2992747
70 Ga0209455_1000013 3300025272 Bacteria 850103
71 Ga0209455_1002105 3300025272 Bacteria 7947
72 Ga0207656_10000012 3300025321 Bacteria 190545
73 Ga0207655_1002397 3300025728 Bacteria 15287
74 Ga0207647_10067089 3300025904 Bacteria 2175
75 Ga0207705_10000006 3300025909 Bacteria 657147
76 Ga0207705_10018637 3300025909 Bacteria 4963
77 Ga0207654_10000003 3300025911 Bacteria 1030378
78 Ga0207695_10002567 3300025913 Bacteria 26687
79 Ga0207695_10026904 3300025913 Bacteria 6412
80 Ga0207671_10000002 3300025914 Bacteria 1144816
81 Ga0207671_10063389 3300025914 Bacteria 2746
82 Ga0207694_10000061 3300025924 Bacteria 141236
83 Ga0207694_10074779 3300025924 Bacteria 2652
84 Ga0207687_10005720 3300025927 Bacteria 8225
85 Ga0207687_10019737 3300025927 Bacteria 4467
86 Ga0207690_10005449 3300025932 Bacteria 7500
87 Ga0207690_10023562 3300025932 Bacteria 3843
88 Ga0207691_10043637 3300025940 Bacteria 4131
89 Ga0207711_10001474 3300025941 Bacteria 21928
90 Ga0207667_10002096 3300025949 Bacteria 24999
91 Ga0207667_10062927 3300025949 Bacteria 3878
92 Ga0207658_10057513 3300025986 Bacteria 2890
93 Ga0207658_10062495 3300025986 Bacteria 2787
94 Ga0207677_10038547 3300026023 Bacteria 3134
95 Ga0207703_10000044 3300026035 Bacteria 158471
96 Ga0207639_10017730 3300026041 Bacteria 5048
97 Ga0207702_10125417 3300026078 Bacteria 2304
98 Ga0207683_10119507 3300026121 Bacteria 2365
99 Ga0207698_10003311 3300026142 Bacteria 9682
100 Ga0307515_10058012 3300028794 Bacteria 5587
101 Ga0307514_10005371 3300031649 Bacteria 11478
102 Ga0307406_10000568 3300031901 Bacteria 21270
103 Ga0307406_10004896 3300031901 Bacteria 7294
104 Ga0307406_10105663 3300031901 Bacteria 1927
105 Ga0307409_100180976 3300031995 Bacteria 1866
106 Ga0395899_0010237 3300037312 Bacteria 7186
107 Ga0395900_0028427 3300037418 Bacteria 5726
108 Ga0395898_0000131 3300037466 Bacteria 192369
109 Ga0395898_0209253 3300037466 Bacteria 1861
110 Ga0395901_0121546 3300038443 Bacteria 2744
111 Ga0451793_0161725 3300041452 Bacteria 2312
112 Ga0466965_0000005 3300044683 Bacteria 185168
113 Ga0466961_0009207 3300044693 Bacteria 6288
114 Ga0466968_0009612 3300044735 Bacteria 3724
115 Ga0466970_0001990 3300044765 Bacteria 9883
116 Ga0466970_0023864 3300044765 Bacteria 3197
117 Ga0466960_0015645 3300044901 Bacteria 3275
118 Ga0466960_0051169 3300044901 Bacteria 1994
119 Ga0466959_0042426 3300045049 Bacteria 3355
120 Ga0466967_0011592 3300045976 Bacteria 6690
121 Ga0495627_000357 3300046453 Bacteria 42749
122 Ga0495590_0002675 3300046457 Bacteria 7369
123 Ga0495650_0001320 3300046471 Bacteria 24946
124 Ga0495672_0029052 3300047320 Bacteria 3488
125 Ga0495626_0029303 3300048091 Bacteria 2665
126 Ga0496101_0014337 3300048904 Bacteria 5323
127 Ga0496102_0037370 3300048905 Bacteria 4380
128 Ga0496103_0017394 3300048906 Bacteria 4303
129 Ga0496105_0044731 3300048908 Bacteria 3652
130 Ga0496105_0055152 3300048908 Bacteria 3281
131 Ga0496105_0139900 3300048908 Bacteria 1993
132 Ga0496107_0072137 3300048910 Bacteria 2510
133 Ga0496109_0028671 3300048912 Bacteria 4982
134 Ga0496111_0035560 3300048914 Bacteria 3561
135 Ga0496114_0014854 3300048917 Bacteria 6257
136 Ga0496114_0042908 3300048917 Bacteria 3750
137 Ga0496114_0055721 3300048917 Bacteria 3297
138 Ga0496115_0024319 3300048918 Bacteria 4706
139 Ga0496116_0035422 3300048919 Bacteria 3505
140 Ga0496117_0000128 3300048920 Bacteria 166039
141 Ga0496117_0000468 3300048920 Bacteria 67418
142 Ga0496117_0000630 3300048920 Bacteria 57051
143 Ga0496117_0001654 3300048920 Bacteria 31298
144 Ga0496117_0002894 3300048920 Bacteria 20783
145 Ga0496117_0017993 3300048920 Bacteria 5880
146 Ga0496117_0026416 3300048920 Bacteria 4543
147 Ga0496118_0000089 3300048921 Bacteria 175942
148 Ga0496118_0007563 3300048921 Bacteria 11468
149 Ga0496118_0023679 3300048921 Bacteria 5325
150 Ga0496118_0046172 3300048921 Bacteria 3392
151 Ga0496118_0073808 3300048921 Bacteria 2441
152 Ga0496119_0000751 3300048922 Bacteria 43594
153 Ga0496119_0002676 3300048922 Bacteria 19249
154 Ga0496119_0002717 3300048922 Bacteria 19096
155 Ga0496119_0008509 3300048922 Bacteria 8998
156 Ga0496119_0010951 3300048922 Bacteria 7573
157 Ga0496119_0018657 3300048922 Bacteria 5150
158 Ga0496119_0035856 3300048922 Bacteria 3243
159 Ga0496120_0000554 3300048923 Bacteria 56930
160 Ga0496120_0001144 3300048923 Bacteria 34063
161 Ga0496120_0001568 3300048923 Bacteria 26755
162 Ga0496120_0001996 3300048923 Bacteria 22213
163 Ga0496120_0006807 3300048923 Bacteria 8665
164 Ga0496121_0000040 3300048924 Bacteria 348494
165 Ga0496122_0000054 3300048925 Bacteria 259135
166 Ga0496122_0000240 3300048925 Bacteria 123001
167 Ga0496122_0002434 3300048925 Bacteria 26462
168 Ga0496122_0002649 3300048925 Bacteria 24993
169 Ga0496122_0006268 3300048925 Bacteria 13738
170 Ga0496122_0013767 3300048925 Bacteria 7887
171 Ga0496122_0026926 3300048925 Bacteria 4936
172 Ga0496122_0084541 3300048925 Bacteria 2194
173 Ga0496123_0000039 3300048926 Bacteria 259107
174 Ga0496123_0000225 3300048926 Bacteria 115105
175 Ga0496123_0000275 3300048926 Bacteria 101770
176 Ga0496123_0001327 3300048926 Bacteria 34954
177 Ga0496123_0006420 3300048926 Bacteria 11401
178 Ga0496123_0029708 3300048926 Bacteria 4015
179 Ga0496124_0000037 3300048927 Bacteria 317430
180 Ga0496124_0001265 3300048927 Bacteria 38466
181 Ga0496124_0001567 3300048927 Bacteria 33061
182 Ga0496124_0002353 3300048927 Bacteria 24953
183 Ga0496124_0132468 3300048927 Bacteria 1978
184 Ga0496125_0000015 3300048928 Bacteria 516648
185 Ga0496125_0000061 3300048928 Bacteria 262739
186 Ga0496125_0005067 3300048928 Bacteria 14850
187 Ga0496125_0005698 3300048928 Bacteria 13733
188 Ga0496125_0006642 3300048928 Bacteria 12447
189 Ga0496125_0041503 3300048928 Bacteria 3931
190 Ga0496126_0000998 3300048929 Bacteria 48229
191 Ga0496126_0005262 3300048929 Bacteria 14867
192 Ga0496126_0080934 3300048929 Bacteria 2873
193 Ga0496126_0123718 3300048929 Bacteria 2240
194 Ga0501031_0005172 3300049568 Bacteria 8501
195 Ga0501031_0008823 3300049568 Bacteria 6555
196 Ga0501031_0015717 3300049568 Bacteria 4914
197 Ga0501032_0008086 3300049569 Bacteria 7667
198 Ga0501032_0009542 3300049569 Bacteria 7036
199 Ga0501032_0051833 3300049569 Bacteria 2766
200 Ga0501033_0002970 3300049570 Bacteria 14167
201 Ga0501033_0005438 3300049570 Bacteria 10094
202 Ga0501033_0010477 3300049570 Bacteria 7111
203 Ga0501034_0001369 3300049571 Bacteria 32786
204 Ga0501034_0025697 3300049571 Bacteria 5997
205 Ga0501034_0032497 3300049571 Bacteria 5298
206 Ga0501034_0048132 3300049571 Bacteria 4303
207 Ga0501034_0050221 3300049571 Bacteria 4207
208 Ga0501034_0080459 3300049571 Bacteria 3261
209 Ga0501034_0086903 3300049571 Bacteria 3127
210 Ga0501036_0059550 3300049572 Bacteria 3235
211 Ga0501037_0005874 3300049573 Bacteria 8968
212 Ga0501037_0007825 3300049573 Bacteria 7827
213 Ga0501038_0013853 3300049574 Bacteria 7348
214 Ga0501038_0013974 3300049574 Bacteria 7318
215 Ga0501038_0021693 3300049574 Bacteria 5761
216 Ga0501038_0030916 3300049574 Bacteria 4734
217 Ga0501039_0006958 3300049575 Bacteria 8610
218 Ga0501039_0007497 3300049575 Bacteria 8332
219 Ga0501042_0002529 3300049578 Bacteria 11257
220 Ga0501043_0024545 3300049579 Bacteria 4730
221 Ga0501043_0029147 3300049579 Bacteria 4335
222 Ga0501043_0048635 3300049579 Bacteria 3334
223 Ga0501043_0079184 3300049579 Bacteria 2582
224 Ga0501043_0110988 3300049579 Bacteria 2153
225 Ga0501046_0005868 3300049580 Bacteria 10949
226 Ga0501046_0015470 3300049580 Bacteria 6407
227 Ga0501046_0043211 3300049580 Bacteria 3588
228 Ga0501047_0007014 3300049581 Bacteria 10577
229 Ga0501047_0014592 3300049581 Bacteria 7475
230 Ga0501047_0029073 3300049581 Bacteria 5331
231 Ga0501047_0072065 3300049581 Bacteria 3325
232 Ga0501047_0116594 3300049581 Bacteria 2552
233 Ga0501048_0025212 3300049582 Bacteria 4334
234 Ga0501067_0044546 3300049583 Bacteria 2465
235 Ga0501069_0062607 3300049585 Bacteria 2077
236 Ga0501070_0000565 3300049586 Bacteria 33728
237 Ga0501070_0000673 3300049586 Bacteria 31551
238 Ga0501070_0002147 3300049586 Bacteria 17327
239 Ga0501070_0004302 3300049586 Bacteria 12239
240 Ga0501070_0008003 3300049586 Bacteria 8951
241 Ga0501070_0102769 3300049586 Bacteria 2363
242 Ga0501071_0000118 3300049587 Bacteria 31358
243 Ga0501073_0000029 3300049589 Bacteria 117147
244 Ga0501073_0079276 3300049589 Bacteria 2286
245 Ga0501080_0001097 3300049742 Bacteria 22311
246 Ga0501083_0000003 3300049744 Bacteria 235949
247 Ga0501083_0015003 3300049744 Bacteria 5423
248 Ga0501035_0001966 3300049822 Bacteria 20571
249 Ga0501035_0050984 3300049822 Bacteria 3707
250 Ga0501035_0073757 3300049822 Bacteria 3020
251 Ga0501035_0115416 3300049822 Bacteria 2350
252 Ga0501044_0002475 3300049823 Bacteria 21071
253 Ga0501044_0014961 3300049823 Bacteria 8365
254 Ga0501044_0020746 3300049823 Bacteria 7013
255 Ga0501045_0048716 3300049824 Bacteria 3088
256 nmdc:mga00v17_28386_c1 3300050491 Bacteria 3276
257 nmdc:mga00v17_6465_c1 3300050491 Bacteria 6219
258 nmdc:mga0yw44_3339_c1 3300050492 Bacteria 6156
259 nmdc:mga0yw44_3772_c1 3300050492 Bacteria 6797
260 Ga0500635_0000012 3300053080 Bacteria 138781
261 Ga0500643_003035 3300053087 Bacteria 8285
262 Ga0500556_0000001 3300053104 Bacteria 1135060
263 Ga0500556_0000215 3300053104 Bacteria 47104
264 Ga0500593_027366 3300053117 Bacteria 2544
265 Ga0500655_000952 3300053133 Bacteria 5580
266 Ga0500559_0000248 3300053136 Bacteria 42720
267 Ga0500559_0017297 3300053136 Bacteria 3044
268 Ga0500559_0036443 3300053136 Bacteria 2127
269 Ga0500568_0000006 3300053139 Bacteria 522235
270 Ga0500568_0000014 3300053139 Bacteria 223550
271 Ga0500568_0000962 3300053139 Bacteria 19809
272 Ga0500573_0000017 3300053140 Bacteria 181426
273 Ga0500573_0002562 3300053140 Bacteria 9130
274 Ga0500573_0002637 3300053140 Bacteria 9041
275 Ga0500573_0013225 3300053140 Bacteria 4647
276 Ga0500588_0009859 3300053146 Bacteria 2287
277 Ga0500590_041006 3300053148 Bacteria 2382
278 Ga0500616_0000021 3300053153 Bacteria 484527
279 Ga0500616_0000125 3300053153 Bacteria 135146
280 Ga0500616_0005229 3300053153 Bacteria 8876
281 Ga0500616_0025654 3300053153 Bacteria 3268
282 2523388154 2523231044 Bacteria 6434991
283 2588108369 2585428157 Bacteria 3018951
284 2643733730 2643221542 Bacteria 3563959
285 2643752007 2643221546 Bacteria 2910897
286 2643767788 2643221549 Bacteria 4042819
287 2643785724 2643221553 Bacteria 3544260
288 2643848413 2643221566 Bacteria 3460379
289 2643875137 2643221572 Bacteria 3614809
290 2643885587 2643221575 Bacteria 4022601
291 2643995876 2643221597 Bacteria 3347721
292 2644096134 2643221616 Bacteria 4066575
293 2644111165 2643221619 Bacteria 4158469
294 2644170305 2643221630 Bacteria 3601215
295 2644199288 2643221635 Bacteria 2632343
296 2644279752 2643221649 Bacteria 3867359
297 2644382193 2643221669 Bacteria 3611286
298 2644444443 2643221679 Bacteria 3839507
299 2644505171 2643221690 Bacteria 4654705
300 2644538903 2643221697 Bacteria 3575694
301 2644680136 2643221724 Bacteria 3593515
302 2645721058 2643221961 Bacteria 3919167
303 2645724038 2643221962 Bacteria 3874254
304 2730229586 2728369380 Bacteria 3620317
305 2747953592 2747842429 Bacteria 3914386
306 2753035025 2751185725 Bacteria 5740550
307 2753302177 2751185788 Bacteria 4541048
308 2753323542 2751185792 Bacteria 5739090
309 2758226258 2757320536 Bacteria 3629334
310 2760304078 2758568522 Bacteria 5953541
311 2774380627 2773857758 Bacteria 3592392
312 2774384388 2773857759 Bacteria 2963774
313 2774399665 2773857763 Bacteria 4180068
314 2808631314 2808606306 Bacteria 3608896
315 2808885525 2808606368 Bacteria 3174172
316 2809227402 2808606447 Bacteria 3572005
317 2812322984 2811994872 Bacteria 4121241
318 2821269887 2821268502 Bacteria 3750023
319 2835188975 2835188231 Bacteria 3476928
320 2844842547 2844841374 Bacteria 3917147
321 2844855492 2844852863 Bacteria 3849151
322 2852633219 2852632344 Bacteria 3463163
323 2852647223 2852646457 Bacteria 3408613
324 2852665206 2852663356 Bacteria 4090475
325 2857723734 2857723135 Bacteria 4217853
326 2857732601 2857729791 Bacteria 4040535
327 2857735659 2857733635 Bacteria 3532004
328 2857737367 2857737099 Bacteria 3104305
329 2870630230 2870628048 Bacteria 3696012
330 2884765500 2884763398 Bacteria 4091164
331 2887445962 2887443736 Bacteria 4426037
332 2895661264 2895660088 Bacteria 3782833
333 2904432679 2904430863 Bacteria 3486923
334 2904503126 2904501621 Bacteria 3401437
335 2904512150 2904509784 Bacteria 3520416
336 2906802916 2906799679 Bacteria 4031749
337 2908675697 2908674828 Bacteria 3382763
338 2908681058 2908678064 Bacteria 3482747
339 2909074749 2909074476 Bacteria 3436050
340 2919040791 2919039151 Bacteria 3391018
341 2919043861 2919042368 Bacteria 3905917
342 2919058232 2919055335 Bacteria 3875751
343 2919072471 2919069694 Bacteria 3622919
344 2919399008 2919395869 Bacteria 3704152
345 2919446233 2919443155 Bacteria 4072969
346 2919524606 2919523602 Bacteria 3788128
347 2928091850 2928090899 Bacteria 3158267
348 2928105107 2928104781 Bacteria 3877447
349 2928122943 2928121344 Bacteria 3972376
350 2928156471 2928153084 Bacteria 4020257
351 2928500681 2928500415 Bacteria 3384541
352 2939657971 2939657138 Bacteria 3740283
353 2939661046 2939660829 Bacteria 3784848
354 2945971694 2945968032 Bacteria 4111363
355 2946033856 2946033335 Bacteria 3835514
356 2946044151 2946041624 Bacteria 4191385
357 2964329705 2964326757 Bacteria 3290868
358 2966922777 2966921586 Bacteria 3092803
359 2966924839 2966924647 Bacteria 3268643
360 2974297025 2974294766 Bacteria 3767688
361 2974326741 2974324384 Bacteria 3750535
362 2977231257 2977228692 Bacteria 3450105
363 2977240038 2977236895 Bacteria 3569373
364 2977254024 2977251589 Bacteria 2952848
365 2977266482 2977264416 Bacteria 3750737
366 2984545688 2984542743 Bacteria 3569378
367 2984554316 2984551494 Bacteria 3877562
368 2984581388 2984580707 Bacteria 3351387
369 2984593737 2984592036 Bacteria 3670284
370 2995727666 2995726249 Bacteria 3470435
371 8002813332 8002811521 Bacteria 2942897
372 8004185215 8004182704 Bacteria 3391155
373 8004214168 8004212874 Bacteria 2861420
374 8016257687 8016254467 Bacteria 3797036
375 8045831073 8045830549 Bacteria 4444727
376 8046356454 8046352972 Bacteria 3613806
377 8055036363 8055034563 Bacteria 3562128
378 8055038169 8055037949 Bacteria 3337834
379 8056037518 8056037122 Bacteria 3854319
380 8057348718 8057345674 Bacteria 4160394
381 Ga0496122_0001091
382 JGI25154J39366_1003499
383 JGI25164J39214_1001065
384 JGI25165J46597_1000883
385 Ga0007423J48922_100481
386 Ga0006562J51391_1005815
387 Ga0006562J51391_1005819
388 Ga0006562J51391_1019552
389 Ga0055539_1000008
390 Ga0055533_1000001
391 Ga0055525_1000489
392 Ga0055527_1000001
393 Ga0055529_1000018
394 Ga0070658_10012566
395 Ga0070658_10023487
396 Ga0070660_100008054
397 Ga0070659_100041717
398 Ga0070659_100043420
399 Ga0070667_100081914
400 Ga0070663_100044578
401 Ga0070685_10003179
402 Ga0070672_100029934
403 Ga0070696_100000964
404 Ga0068855_100165490
405 Ga0068857_100001238
406 Ga0068852_100007071
407 Ga0068851_10000003
408 Ga0068858_100003053
409 Ga0075365_10000716
410 Ga0075365_10000907
411 Ga0075365_10014815
412 Ga0075364_10000555
413 Ga0075364_10014520
414 Ga0075364_10099775
415 Ga0075369_10012669
416 Ga0075369_10014371
417 Ga0105240_10026377
418 Ga0105241_10000330
419 Ga0105248_10005259
420 Ga0105248_10163180
421 Ga0105237_10000751
422 Ga0105237_10022802
423 Ga0105238_10007970
424 Ga0105239_10013744
425 Ga0157370_10000369
426 Ga0157369_10000408
427 Ga0157369_10023160
428 Ga0157369_10041561
429 Ga0171462_1003
430 Ga0157372_10134766
431 Ga0157375_10082475
432 Ga0163163_10025995
433 Ga0157379_10007772
434 Ga0206353_10061446
435 Ga0209566_100050
436 Ga0209674_100001
437 Ga0209672_100006
438 Ga0209147_100988
439 Ga0209563_100001
440 Ga0209563_101452
441 Ga0207427_100052
442 Ga0209437_100813
443 Ga0209258_104090
444 Ga0209646_1000099
445 Ga0209677_100001
446 Ga0209677_104612
447 Ga0209148_1000015
448 Ga0209148_1000498
449 Ga0209233_1000001
450 Ga0209455_1000013
451 Ga0209455_1002105
452 Ga0207656_10000012
453 Ga0207655_1002397
454 Ga0207647_10067089
455 Ga0207705_10000006
456 Ga0207705_10018637
457 Ga0207654_10000003
458 Ga0207695_10002567
459 Ga0207695_10026904
460 Ga0207671_10000002
461 Ga0207671_10063389
462 Ga0207694_10000061
463 Ga0207694_10074779
464 Ga0207687_10005720
465 Ga0207687_10019737
466 Ga0207690_10005449
467 Ga0207690_10023562
468 Ga0207691_10043637
469 Ga0207711_10001474
470 Ga0207667_10002096
471 Ga0207667_10062927
472 Ga0207658_10057513
473 Ga0207658_10062495
474 Ga0207677_10038547
475 Ga0207703_10000044
476 Ga0207639_10017730
477 Ga0207702_10125417
478 Ga0207683_10119507
479 Ga0207698_10003311
480 Ga0307515_10058012
481 Ga0307514_10005371
482 Ga0307406_10000568
483 Ga0307406_10004896
484 Ga0307406_10105663
485 Ga0307409_100180976
486 Ga0395899_0010237
487 Ga0395900_0028427
488 Ga0395898_0000131
489 Ga0395898_0209253
490 Ga0395901_0121546
491 Ga0451793_0161725
492 Ga0466965_0000005
493 Ga0466961_0009207
494 Ga0466968_0009612
495 Ga0466970_0001990
496 Ga0466970_0023864
497 Ga0466960_0015645
498 Ga0466960_0051169
499 Ga0466959_0042426
500 Ga0466967_0011592
501 Ga0495627_000357
502 Ga0495590_0002675
503 Ga0495650_0001320
504 Ga0495672_0029052
505 Ga0495626_0029303
506 Ga0496101_0014337
507 Ga0496102_0037370
508 Ga0496103_0017394
509 Ga0496105_0044731
510 Ga0496105_0055152
511 Ga0496105_0139900
512 Ga0496107_0072137
513 Ga0496109_0028671
514 Ga0496111_0035560
515 Ga0496114_0014854
516 Ga0496114_0042908
517 Ga0496114_0055721
518 Ga0496115_0024319
519 Ga0496116_0035422
520 Ga0496117_0000128
521 Ga0496117_0000468
522 Ga0496117_0000630
523 Ga0496117_0001654
524 Ga0496117_0002894
525 Ga0496117_0017993
526 Ga0496117_0026416
527 Ga0496118_0000089
528 Ga0496118_0007563
529 Ga0496118_0023679
530 Ga0496118_0046172
531 Ga0496118_0073808
532 Ga0496119_0000751
533 Ga0496119_0002676
534 Ga0496119_0002717
535 Ga0496119_0008509
536 Ga0496119_0010951
537 Ga0496119_0018657
538 Ga0496119_0035856
539 Ga0496120_0000554
540 Ga0496120_0001144
541 Ga0496120_0001568
542 Ga0496120_0001996
543 Ga0496120_0006807
544 Ga0496121_0000040
545 Ga0496122_0000054
546 Ga0496122_0000240
547 Ga0496122_0002434
548 Ga0496122_0002649
549 Ga0496122_0006268
550 Ga0496122_0013767
551 Ga0496122_0026926
552 Ga0496122_0084541
553 Ga0496123_0000039
554 Ga0496123_0000225
555 Ga0496123_0000275
556 Ga0496123_0001327
557 Ga0496123_0006420
558 Ga0496123_0029708
559 Ga0496124_0000037
560 Ga0496124_0001265
561 Ga0496124_0001567
562 Ga0496124_0002353
563 Ga0496124_0132468
564 Ga0496125_0000015
565 Ga0496125_0000061
566 Ga0496125_0005067
567 Ga0496125_0005698
568 Ga0496125_0006642
569 Ga0496125_0041503
570 Ga0496126_0000998
571 Ga0496126_0005262
572 Ga0496126_0080934
573 Ga0496126_0123718
574 Ga0501031_0005172
575 Ga0501031_0008823
576 Ga0501031_0015717
577 Ga0501032_0008086
578 Ga0501032_0009542
579 Ga0501032_0051833
580 Ga0501033_0002970
581 Ga0501033_0005438
582 Ga0501033_0010477
583 Ga0501034_0001369
584 Ga0501034_0025697
585 Ga0501034_0032497
586 Ga0501034_0048132
587 Ga0501034_0050221
588 Ga0501034_0080459
589 Ga0501034_0086903
590 Ga0501036_0059550
591 Ga0501037_0005874
592 Ga0501037_0007825
593 Ga0501038_0013853
594 Ga0501038_0013974
595 Ga0501038_0021693
596 Ga0501038_0030916
597 Ga0501039_0006958
598 Ga0501039_0007497
599 Ga0501042_0002529
600 Ga0501043_0024545
601 Ga0501043_0029147
602 Ga0501043_0048635
603 Ga0501043_0079184
604 Ga0501043_0110988
605 Ga0501046_0005868
606 Ga0501046_0015470
607 Ga0501046_0043211
608 Ga0501047_0007014
609 Ga0501047_0014592
610 Ga0501047_0029073
611 Ga0501047_0072065
612 Ga0501047_0116594
613 Ga0501048_0025212
614 Ga0501067_0044546
615 Ga0501069_0062607
616 Ga0501070_0000565
617 Ga0501070_0000673
618 Ga0501070_0002147
619 Ga0501070_0004302
620 Ga0501070_0008003
621 Ga0501070_0102769
622 Ga0501071_0000118
623 Ga0501073_0000029
624 Ga0501073_0079276
625 Ga0501080_0001097
626 Ga0501083_0000003
627 Ga0501083_0015003
628 Ga0501035_0001966
629 Ga0501035_0050984
630 Ga0501035_0073757
631 Ga0501035_0115416
632 Ga0501044_0002475
633 Ga0501044_0014961
634 Ga0501044_0020746
635 Ga0501045_0048716
636 nmdc:mga00v17_28386_c1
637 nmdc:mga00v17_6465_c1
638 nmdc:mga0yw44_3339_c1
639 nmdc:mga0yw44_3772_c1
640 Ga0500635_0000012
641 Ga0500643_003035
642 Ga0500556_0000001
643 Ga0500556_0000215
644 Ga0500593_027366
645 Ga0500655_000952
646 Ga0500559_0000248
647 Ga0500559_0017297
648 Ga0500559_0036443
649 Ga0500568_0000006
650 Ga0500568_0000014
651 Ga0500568_0000962
652 Ga0500573_0000017
653 Ga0500573_0002562
654 Ga0500573_0002637
655 Ga0500573_0013225
656 Ga0500588_0009859
657 Ga0500590_041006
658 Ga0500616_0000021
659 Ga0500616_0000125
660 Ga0500616_0005229
661 Ga0500616_0025654
662 2523388154
663 2588108369
664 2643733730
665 2643752007
666 2643767788
667 2643785724
668 2643848413
669 2643875137
670 2643885587
671 2643995876
672 2644096134
673 2644111165
674 2644170305
675 2644199288
676 2644279752
677 2644382193
678 2644444443
679 2644505171
680 2644538903
681 2644680136
682 2645721058
683 2645724038
684 2730229586
685 2747953592
686 2753035025
687 2753302177
688 2753323542
689 2758226258
690 2760304078
691 2774380627
692 2774384388
693 2774399665
694 2808631314
695 2808885525
696 2809227402
697 2812322984
698 2821269887
699 2835188975
700 2844842547
701 2844855492
702 2852633219
703 2852647223
704 2852665206
705 2857723734
706 2857732601
707 2857735659
708 2857737367
709 2870630230
710 2884765500
711 2887445962
712 2895661264
713 2904432679
714 2904503126
715 2904512150
716 2906802916
717 2908675697
718 2908681058
719 2909074749
720 2919040791
721 2919043861
722 2919058232
723 2919072471
724 2919399008
725 2919446233
726 2919524606
727 2928091850
728 2928105107
729 2928122943
730 2928156471
731 2928500681
732 2939657971
733 2939661046
734 2945971694
735 2946033856
736 2946044151
737 2964329705
738 2966922777
739 2966924839
740 2974297025
741 2974326741
742 2977231257
743 2977240038
744 2977254024
745 2977266482
746 2984545688
747 2984554316
748 2984581388
749 2984593737
750 2995727666
751 8002813332
752 8004185215
753 8004214168
754 8016257687
755 8045831073
756 8046356454
757 8055036363
758 8055038169
759 8056037518
760 8057348718

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

41

579

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.971 6 556
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.9677 6 556
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.9675 6 556
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.9643 6 556
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8615 11 555
ID Description Score Start End Superfamily
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.8522 39 554 1.10.1370.30
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.7913 39 554 1.10.1370.30
af_A0A2R8QF62_125_283_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.3665 51 222 1.25.10.10
af_A0A2R8QF62_125_283_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.3528 51 222 1.25.10.10
af_Q7YX57_32_185_1.20.58.830 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.3451 11 219 1.20.58.830
ID Description Score Start End GO Terms
AF-A0A7K1TSD0-F1-model_v4 DUF885 family protein 0.9971 1 557
AF-A0A5J5J915-F1-model_v4 deleted 0.9964 14 557
AF-A0A2W6V9R4-F1-model_v4 DUF885 domain-containing protein 0.9961 1 260
AF-A0A7D8AL21-F1-model_v4 DUF885 domain-containing protein 0.996 1 557
AF-A0A6J7E332-F1-model_v4 Unannotated protein 0.9957 427 555

Map