F429123

General Info

Members Datasets Scaffolds Average Seq Length
381 218 360 313

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2984576629|2984580238
Length 355
Sequence GQSSTSARTEEDPVVVTPEHDLHPVPVSESLPPVPPGSLSEEETADDLGVRDEPAPASRATLRDVVAAYVGLTKPRVLELLLLTTVPVMFFAARGVPELGVVLATVVAGSMSAGSASALNCVYDRDIDEQMRRTRRRALPRHIVTPRAALVFGLTLGVLSTLIFWVFVNPLSAVLSLSANAFYMLVYTMWLKRRTTQNIVWGGAAGCFPALIGWTAVTNELAWPPVVCFLIVFLWTPPHTWALALRYREDYANVAVPMLPVVAPGAVVGKQIVLYTWATVAMSLALWPVAGTGLFYPAAAAVLGVVFLVEAHKMWGRTRHSDQLSVINPMRLFHTSNLYLSLLFVAIAIDPLLMR

Samples

Sample ID Description Type Environment
1 2643221576 Nocardioides sp. Root614 Isolate Unclassified
2 2643221590 Nocardioides sp. Root682 Isolate Unclassified
3 2643221604 Nocardioides sp. Root190 Isolate Unclassified
4 2643221615 Nocardioides sp. Root224 Isolate Unclassified
5 2643221617 Nocardioides sp. Root79 Isolate Unclassified
6 2643221620 Nocardioides sp. Root240 Isolate Unclassified
7 2643221641 Nocardioides sp. Root122 Isolate Unclassified
8 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
9 2643221696 Nocardioides sp. Root140 Isolate Unclassified
10 2738541305 Nocardioides sp. CF167 Isolate Unclassified
11 2739367898 Nocardioides sp. CF479 Isolate Unclassified
12 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
13 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
14 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
15 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
16 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
17 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
18 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
19 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
20 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
21 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
22 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
23 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
24 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
25 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
26 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
27 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
28 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
29 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
30 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
31 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
32 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
33 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
34 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
35 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
38 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
39 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
40 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
43 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
44 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
45 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
55 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
56 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
57 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
58 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
59 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
60 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
61 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
63 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
83 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
84 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
85 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
116 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
120 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
121 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
122 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
123 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
124 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
125 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
126 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
127 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
134 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
135 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
136 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
137 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
138 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
139 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
140 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
141 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
142 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
143 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
144 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
147 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
148 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
149 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
150 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
151 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
152 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
168 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
169 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
170 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
183 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
184 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
185 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
186 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
187 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
188 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
189 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
190 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
191 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
192 3300049659 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control Metagenome Rhizosphere
193 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
194 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
195 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
196 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
198 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
199 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
200 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
201 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
202 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
203 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
204 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
205 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
206 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
207 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
208 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
209 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
210 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
211 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
212 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
213 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
214 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
215 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
216 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
217 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
218 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.7
Metatranscriptomes 0.79
Isolates 5.51

Biome Distribution

Category Percentage (%)
Aerial Root 0.52
Bulb 0
Endosphere 11.55
Nodule 0.26
Rhizoplane 11.29
Rhizosphere 70.08
Stem 0
Stem Tuber 0
Unclassified 6.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1002758 3300000549 Bacteria 2413
2 JGI24738J21930_10002814 3300002075 Bacteria 4457
3 JGI24744J21845_10004133 3300002077 Bacteria 2994
4 Ga0006562J51391_1024882 3300003578 Bacteria 4290
5 Ga0070658_10006110 3300005327 Bacteria 9767
6 Ga0070658_10033541 3300005327 Bacteria 4131
7 Ga0070683_100018123 3300005329 Bacteria 6232
8 Ga0070683_100046941 3300005329 Bacteria 3991
9 Ga0070683_100293413 3300005329 Bacteria 1547
10 Ga0070680_100045008 3300005336 Bacteria 3587
11 Ga0070682_100008426 3300005337 Bacteria 5817
12 Ga0070660_100025535 3300005339 Bacteria 4391
13 Ga0070660_100124671 3300005339 Bacteria 2058
14 Ga0070689_100468810 3300005340 Bacteria 1074
15 Ga0070691_10043659 3300005341 Bacteria 2124
16 Ga0070687_100191411 3300005343 Bacteria 1233
17 Ga0070692_10003604 3300005345 Bacteria 6317
18 Ga0070692_10039426 3300005345 Bacteria 2412
19 Ga0070668_100141741 3300005347 Bacteria 1937
20 Ga0070675_100017128 3300005354 Bacteria 5758
21 Ga0070667_100029869 3300005367 Bacteria 4544
22 Ga0070714_100007882 3300005435 Bacteria 8296
23 Ga0070701_10001816 3300005438 Bacteria 8065
24 Ga0070700_100002329 3300005441 Bacteria 9673
25 Ga0070708_100399985 3300005445 Bacteria 1295
26 Ga0070662_100189905 3300005457 Bacteria 1624
27 Ga0068867_100020744 3300005459 Bacteria 4684
28 Ga0070698_100008110 3300005471 Bacteria 11352
29 Ga0070684_100001477 3300005535 Bacteria 16957
30 Ga0070684_100159387 3300005535 Bacteria 2046
31 Ga0070672_100024550 3300005543 Bacteria 4458
32 Ga0068857_100345592 3300005577 Bacteria 1377
33 Ga0070702_100120889 3300005615 Bacteria 1639
34 Ga0068852_100117197 3300005616 Bacteria 2431
35 Ga0068852_100170647 3300005616 Bacteria 2039
36 Ga0068861_100003161 3300005719 Bacteria 10889
37 Ga0068870_10084185 3300005840 Bacteria 1765
38 Ga0068863_100141569 3300005841 Bacteria 2299
39 Ga0068858_100195000 3300005842 Bacteria 1914
40 Ga0068860_100000490 3300005843 Bacteria 48926
41 Ga0068860_100147784 3300005843 Bacteria 2262
42 Ga0081455_10000061 3300005937 Bacteria 117154
43 Ga0081539_10021498 3300005985 Bacteria 4307
44 Ga0075365_10000221 3300006038 Bacteria 19248
45 Ga0075365_10027129 3300006038 Bacteria 3641
46 Ga0075365_10036043 3300006038 Bacteria 3204
47 Ga0075365_10048742 3300006038 Bacteria 2789
48 Ga0075365_10049569 3300006038 Bacteria 2767
49 Ga0075365_10080373 3300006038 Bacteria 2207
50 Ga0075365_10130512 3300006038 Bacteria 1739
51 Ga0075368_10000261 3300006042 Bacteria 15132
52 Ga0075363_100032276 3300006048 Bacteria 2719
53 Ga0075363_100038435 3300006048 Bacteria 2517
54 Ga0075363_100105909 3300006048 Bacteria 1560
55 Ga0075364_10005307 3300006051 Bacteria 7478
56 Ga0075364_10045877 3300006051 Bacteria 2844
57 Ga0075367_10001494 3300006178 Bacteria 10101
58 Ga0075367_10017645 3300006178 Bacteria 3922
59 Ga0075367_10046879 3300006178 Bacteria 2541
60 Ga0075367_10046981 3300006178 Bacteria 2538
61 Ga0097621_100303878 3300006237 Bacteria 1410
62 Ga0097621_100308267 3300006237 Bacteria 1400
63 Ga0075370_10010908 3300006353 Bacteria 4763
64 Ga0075370_10013343 3300006353 Bacteria 4364
65 Ga0068865_100032029 3300006881 Bacteria 3508
66 Ga0068865_100072371 3300006881 Bacteria 2449
67 Ga0068865_100146203 3300006881 Bacteria 1788
68 Ga0111539_10037503 3300009094 Bacteria 5852
69 Ga0111539_10324047 3300009094 Bacteria 1793
70 Ga0105245_10004528 3300009098 Bacteria 12274
71 Ga0105243_10004223 3300009148 Bacteria 11385
72 Ga0105237_10110821 3300009545 Bacteria 2736
73 Ga0105238_10286268 3300009551 Bacteria 1630
74 Ga0105249_10094187 3300009553 Bacteria 2806
75 Ga0105249_10196292 3300009553 Bacteria 1973
76 Ga0105249_10327593 3300009553 Bacteria 1544
77 Ga0105239_10026839 3300010375 Bacteria 6339
78 Ga0105239_10499068 3300010375 Bacteria 1383
79 Ga0105246_10123348 3300011119 Bacteria 1923
80 Ga0157370_10526169 3300013104 Bacteria 1085
81 Ga0157369_10429393 3300013105 Bacteria 1369
82 Ga0157374_10485935 3300013296 Bacteria 1238
83 Ga0163162_10029430 3300013306 Bacteria 5435
84 Ga0157372_10122037 3300013307 Bacteria 2994
85 Ga0157372_10127798 3300013307 Bacteria 2922
86 Ga0157372_10378378 3300013307 Bacteria 1650
87 Ga0157372_10424475 3300013307 Bacteria 1549
88 Ga0157375_10123070 3300013308 Bacteria 2706
89 Ga0163163_10044656 3300014325 Bacteria 4348
90 Ga0163163_10162381 3300014325 Bacteria 2280
91 Ga0157380_10015963 3300014326 Bacteria 5528
92 Ga0157380_10162802 3300014326 Bacteria 1941
93 Ga0157377_10004220 3300014745 Bacteria 6580
94 Ga0157379_10043023 3300014968 Bacteria 4033
95 Ga0163161_10156321 3300017792 Bacteria 1736
96 Ga0197907_11497974 3300020069 Bacteria 1006
97 Ga0206353_11771831 3300020082 Bacteria 4683
98 Ga0207642_10118906 3300025899 Bacteria 1359
99 Ga0207688_10015271 3300025901 Bacteria 4167
100 Ga0207688_10036842 3300025901 Bacteria 2712
101 Ga0207647_10022446 3300025904 Bacteria 4191
102 Ga0207643_10016617 3300025908 Bacteria 4013
103 Ga0207705_10037478 3300025909 Bacteria 3470
104 Ga0207660_10125704 3300025917 Bacteria 1947
105 Ga0207657_10043024 3300025919 Bacteria 3982
106 Ga0207694_10135885 3300025924 Bacteria 1974
107 Ga0207694_10248217 3300025924 Bacteria 1456
108 Ga0207694_10257961 3300025924 Bacteria 1428
109 Ga0207659_10126013 3300025926 Bacteria 1969
110 Ga0207687_10015325 3300025927 Bacteria 5023
111 Ga0207687_10027309 3300025927 Bacteria 3829
112 Ga0207664_10008825 3300025929 Bacteria 7050
113 Ga0207706_10187387 3300025933 Bacteria 1817
114 Ga0207709_10031485 3300025935 Bacteria 3099
115 Ga0207709_10207682 3300025935 Bacteria 1403
116 Ga0207670_10411004 3300025936 Bacteria 1084
117 Ga0207669_10062399 3300025937 Bacteria 2295
118 Ga0207704_10005228 3300025938 Bacteria 5977
119 Ga0207691_10001793 3300025940 Bacteria 21101
120 Ga0207691_10171429 3300025940 Bacteria 1900
121 Ga0207661_10015195 3300025944 Bacteria 5661
122 Ga0207661_10044148 3300025944 Bacteria 3521
123 Ga0207667_10315641 3300025949 Bacteria 1596
124 Ga0207712_10158757 3300025961 Bacteria 1755
125 Ga0207658_10024865 3300025986 Bacteria 4190
126 Ga0207677_10085990 3300026023 Bacteria 2271
127 Ga0207678_10034989 3300026067 Bacteria 4374
128 Ga0207678_10146135 3300026067 Bacteria 2018
129 Ga0207708_10001850 3300026075 Bacteria 15579
130 Ga0207708_10008990 3300026075 Bacteria 7394
131 Ga0207641_10130287 3300026088 Bacteria 2258
132 Ga0207648_10004357 3300026089 Bacteria 14562
133 Ga0207674_10358619 3300026116 Bacteria 1409
134 Ga0207675_100013712 3300026118 Bacteria 7565
135 Ga0207675_100047270 3300026118 Bacteria 4018
136 Ga0207675_100556537 3300026118 Bacteria 1147
137 Ga0207683_10211181 3300026121 Bacteria 1767
138 Ga0207698_10184162 3300026142 Bacteria 1853
139 Ga0207698_10236496 3300026142 Bacteria 1662
140 Ga0209813_10003317 3300027866 Bacteria 3761
141 Ga0209813_10003321 3300027866 Bacteria 3760
142 Ga0207428_10033168 3300027907 Bacteria 4243
143 Ga0268266_10000855 3300028379 Bacteria 39694
144 Ga0268264_10000155 3300028381 Bacteria 156029
145 Ga0268264_10092113 3300028381 Bacteria 2616
146 Ga0316181_1168304 3300030744 Bacteria 1982
147 Ga0307413_10098137 3300031824 Bacteria 1928
148 Ga0307413_10261802 3300031824 Bacteria 1290
149 Ga0307406_10371710 3300031901 Bacteria 1124
150 Ga0307412_10140521 3300031911 Bacteria 1768
151 Ga0307409_100048117 3300031995 Bacteria 3242
152 Ga0307409_100100772 3300031995 Bacteria 2395
153 Ga0307409_100186906 3300031995 Bacteria 1840
154 Ga0307414_10225303 3300032004 Bacteria 1542
155 Ga0307415_100022407 3300032126 Bacteria 3897
156 Ga0307415_100134651 3300032126 Bacteria 1877
157 Ga0307415_100374294 3300032126 Bacteria 1207
158 Ga0373928_0006965 3300035084 Bacteria 2179
159 Ga0373925_0513145 3300037068 Bacteria 984
160 Ga0395900_0047031 3300037418 Bacteria 4443
161 Ga0395900_0156530 3300037418 Bacteria 2327
162 Ga0395898_0016967 3300037466 Bacteria 7435
163 Ga0395905_0025063 3300037471 Bacteria 5626
164 Ga0395901_0049469 3300038443 Bacteria 4367
165 Ga0395901_0126048 3300038443 Bacteria 2691
166 Ga0436365_1493108 3300039437 Bacteria 1353
167 Ga0451841_0803626 3300041498 Bacteria 1471
168 Ga0451843_1095300 3300041509 Bacteria 3619
169 Ga0451853_3912024 3300041512 Bacteria 1760
170 Ga0466965_0007926 3300044683 Bacteria 4897
171 Ga0466965_0013381 3300044683 Bacteria 3872
172 Ga0466965_0055902 3300044683 Bacteria 1965
173 Ga0466965_0171100 3300044683 Bacteria 1143
174 Ga0466966_0008071 3300044684 Bacteria 6976
175 Ga0466966_0086469 3300044684 Bacteria 1949
176 Ga0466961_0030541 3300044693 Bacteria 3463
177 Ga0466963_0025953 3300044694 Bacteria 3742
178 Ga0466963_0078100 3300044694 Bacteria 2237
179 Ga0466963_0093427 3300044694 Bacteria 2051
180 Ga0466963_0104896 3300044694 Bacteria 1937
181 Ga0466963_0127457 3300044694 Bacteria 1755
182 Ga0466963_0139925 3300044694 Bacteria 1676
183 Ga0466963_0161639 3300044694 Bacteria 1559
184 Ga0466964_0001429 3300044706 Bacteria 8150
185 Ga0466964_0031212 3300044706 Bacteria 2112
186 Ga0466964_0079653 3300044706 Bacteria 1403
187 Ga0466971_0003253 3300044719 Bacteria 6931
188 Ga0466970_0004969 3300044765 Bacteria 6569
189 Ga0466970_0015975 3300044765 Bacteria 3865
190 Ga0466970_0037612 3300044765 Bacteria 2566
191 Ga0466970_0039104 3300044765 Bacteria 2517
192 Ga0466957_0008762 3300044842 Bacteria 5758
193 Ga0466957_0010607 3300044842 Bacteria 5296
194 Ga0466960_0003267 3300044901 Bacteria 6211
195 Ga0466960_0023046 3300044901 Bacteria 2791
196 Ga0466960_0067948 3300044901 Bacteria 1767
197 Ga0466960_0094754 3300044901 Bacteria 1527
198 Ga0466959_0206100 3300045049 Bacteria 1368
199 Ga0451576_0138053 3300045051 Bacteria 2543
200 Ga0466958_0031260 3300045836 Bacteria 3164
201 Ga0466967_0002795 3300045976 Bacteria 11061
202 Ga0466967_0056854 3300045976 Bacteria 3451
203 Ga0466967_0117128 3300045976 Bacteria 2455
204 Ga0466967_0253697 3300045976 Bacteria 1681
205 Ga0466967_0435210 3300045976 Bacteria 1280
206 Ga0495629_0296510 3300046459 Bacteria 1108
207 Ga0495651_0338428 3300046462 Bacteria 998
208 Ga0495596_0076388 3300046500 Bacteria 1301
209 Ga0495600_0178950 3300046809 Bacteria 1367
210 Ga0495602_0236501 3300048088 Bacteria 1369
211 Ga0496100_0066360 3300048903 Bacteria 2393
212 Ga0496101_0132989 3300048904 Bacteria 1890
213 Ga0496102_0180194 3300048905 Bacteria 1990
214 Ga0496102_0191570 3300048905 Bacteria 1927
215 Ga0496102_0416636 3300048905 Bacteria 1262
216 Ga0496103_0013870 3300048906 Bacteria 4785
217 Ga0496103_0056051 3300048906 Bacteria 2446
218 Ga0496103_0132829 3300048906 Bacteria 1590
219 Ga0496104_0014650 3300048907 Bacteria 7083
220 Ga0496105_0010401 3300048908 Bacteria 7317
221 Ga0496105_0019473 3300048908 Bacteria 5474
222 Ga0496106_0033926 3300048909 Bacteria 3810
223 Ga0496106_0158607 3300048909 Bacteria 1788
224 Ga0496106_0262790 3300048909 Bacteria 1381
225 Ga0496106_0315383 3300048909 Bacteria 1255
226 Ga0496106_0411273 3300048909 Bacteria 1087
227 Ga0496107_0000307 3300048910 Bacteria 26245
228 Ga0496107_0070073 3300048910 Bacteria 2545
229 Ga0496107_0123606 3300048910 Bacteria 1907
230 Ga0496107_0130555 3300048910 Bacteria 1855
231 Ga0496108_0012732 3300048911 Bacteria 6850
232 Ga0496108_0122036 3300048911 Bacteria 2235
233 Ga0496108_0280786 3300048911 Bacteria 1450
234 Ga0496109_0013346 3300048912 Bacteria 7122
235 Ga0496109_0032749 3300048912 Bacteria 4674
236 Ga0496109_0049722 3300048912 Bacteria 3818
237 Ga0496109_0068110 3300048912 Bacteria 3262
238 Ga0496109_0098241 3300048912 Bacteria 2714
239 Ga0496110_0024723 3300048913 Bacteria 5123
240 Ga0496110_0047714 3300048913 Bacteria 3752
241 Ga0496110_0226799 3300048913 Bacteria 1699
242 Ga0496110_0294830 3300048913 Bacteria 1477
243 Ga0496111_0003546 3300048914 Bacteria 9660
244 Ga0496111_0115805 3300048914 Bacteria 1976
245 Ga0496111_0167160 3300048914 Bacteria 1634
246 Ga0496113_0058898 3300048916 Bacteria 2892
247 Ga0496114_0003667 3300048917 Bacteria 11812
248 Ga0496114_0006853 3300048917 Bacteria 8976
249 Ga0496114_0013685 3300048917 Bacteria 6504
250 Ga0496114_0149406 3300048917 Bacteria 2026
251 Ga0496114_0196135 3300048917 Bacteria 1767
252 Ga0496115_0003056 3300048918 Bacteria 12019
253 Ga0496115_0056269 3300048918 Bacteria 3161
254 Ga0496124_0054890 3300048927 Bacteria 3370
255 Ga0501031_0002958 3300049568 Bacteria 10872
256 Ga0501031_0085895 3300049568 Bacteria 2051
257 Ga0501031_0168075 3300049568 Bacteria 1433
258 Ga0501032_0005244 3300049569 Bacteria 9642
259 Ga0501033_0003239 3300049570 Bacteria 13469
260 Ga0501034_0068192 3300049571 Bacteria 3568
261 Ga0501034_0176412 3300049571 Bacteria 2103
262 Ga0501034_0197104 3300049571 Bacteria 1973
263 Ga0501036_0022802 3300049572 Bacteria 5271
264 Ga0501036_0117320 3300049572 Bacteria 2248
265 Ga0501036_0121165 3300049572 Bacteria 2209
266 Ga0501036_0436549 3300049572 Bacteria 1091
267 Ga0501037_0005739 3300049573 Bacteria 9062
268 Ga0501037_0019040 3300049573 Bacteria 5061
269 Ga0501037_0024513 3300049573 Bacteria 4462
270 Ga0501037_0155312 3300049573 Bacteria 1634
271 Ga0501037_0241078 3300049573 Bacteria 1267
272 Ga0501038_0006287 3300049574 Bacteria 10981
273 Ga0501038_0016476 3300049574 Bacteria 6698
274 Ga0501038_0199628 3300049574 Bacteria 1606
275 Ga0501038_0199916 3300049574 Bacteria 1604
276 Ga0501039_0031299 3300049575 Bacteria 4101
277 Ga0501039_0060434 3300049575 Bacteria 2935
278 Ga0501039_0266531 3300049575 Bacteria 1346
279 Ga0501040_0126262 3300049576 Bacteria 1797
280 Ga0501040_0134445 3300049576 Bacteria 1740
281 Ga0501042_0061259 3300049578 Bacteria 2688
282 Ga0501042_0094099 3300049578 Bacteria 2152
283 Ga0501047_0151734 3300049581 Bacteria 2193
284 Ga0501048_0003081 3300049582 Bacteria 12710
285 Ga0501048_0057016 3300049582 Bacteria 2771
286 Ga0501048_0066143 3300049582 Bacteria 2556
287 Ga0501067_0005364 3300049583 Bacteria 7117
288 Ga0501067_0081411 3300049583 Bacteria 1795
289 Ga0501068_0158857 3300049584 Bacteria 1424
290 Ga0501069_0025248 3300049585 Bacteria 3246
291 Ga0501069_0100229 3300049585 Bacteria 1644
292 Ga0501069_0138073 3300049585 Bacteria 1398
293 Ga0501069_0190135 3300049585 Bacteria 1188
294 Ga0501070_0005637 3300049586 Bacteria 10679
295 Ga0501070_0015637 3300049586 Bacteria 6379
296 Ga0501070_0020827 3300049586 Bacteria 5501
297 Ga0501070_0121961 3300049586 Bacteria 2154
298 Ga0501070_0249480 3300049586 Bacteria 1452
299 Ga0501071_0017633 3300049587 Bacteria 4928
300 Ga0501072_0055754 3300049588 Bacteria 3114
301 Ga0501073_0314266 3300049589 Bacteria 1081
302 Ga0501074_0006951 3300049590 Bacteria 8173
303 Ga0501074_0092842 3300049590 Bacteria 2161
304 Ga0501076_0025591 3300049592 Bacteria 4569
305 Ga0501076_0075024 3300049592 Bacteria 2710
306 Ga0501077_0010320 3300049593 Bacteria 5811
307 Ga0501077_0012412 3300049593 Bacteria 5335
308 Ga0501077_0022435 3300049593 Bacteria 3999
309 Ga0501214_004308 3300049659 Bacteria 1311
310 Ga0501079_0059045 3300049741 Bacteria 2959
311 Ga0501080_0001505 3300049742 Bacteria 19670
312 Ga0501080_0007958 3300049742 Bacteria 9605
313 Ga0501080_0101066 3300049742 Bacteria 2675
314 Ga0501080_0281571 3300049742 Bacteria 1512
315 Ga0501083_0009704 3300049744 Bacteria 6798
316 Ga0501035_0004064 3300049822 Bacteria 13923
317 Ga0501035_0079693 3300049822 Bacteria 2892
318 Ga0501035_0117710 3300049822 Bacteria 2325
319 Ga0501035_0340086 3300049822 Bacteria 1258
320 Ga0501045_0239650 3300049824 Bacteria 1350
321 Ga0501045_0404862 3300049824 Bacteria 1015
322 nmdc:mga03683_33001_c1 3300050489 Bacteria 2085
323 nmdc:mga03n38_25726_c1 3300050490 Bacteria 2422
324 nmdc:mga00v17_86011_c1 3300050491 Bacteria 1970
325 nmdc:mga00v17_9082_c1 3300050491 Bacteria 5367
326 nmdc:mga0yw44_10027_c1 3300050492 Bacteria 4819
327 nmdc:mga0yw44_104189_c1 3300050492 Bacteria 1810
328 nmdc:mga0yw44_10640_c1 3300050492 Bacteria 4709
329 nmdc:mga0yw44_131260_c1 3300050492 Bacteria 1622
330 nmdc:mga0yw44_171697_c1 3300050492 Bacteria 1424
331 nmdc:mga0yw44_17284_c1 3300050492 Bacteria 3923
332 nmdc:mga0yw44_206487_c1 3300050492 Bacteria 1299
333 nmdc:mga0yw44_48572_c1 3300050492 Bacteria 2559
334 nmdc:mga0yw44_94516_c1 3300050492 Bacteria 1895
335 nmdc:mga06z11_12371_c1 3300050494 Bacteria 3710
336 nmdc:mga04h51_6357_c1 3300050495 Bacteria 3060
337 nmdc:mga07m45_1520_c1 3300050496 Bacteria 10641
338 nmdc:mga07m45_33533_c1 3300050496 Bacteria 2852
339 nmdc:mga07m45_88907_c1 3300050496 Bacteria 1768
340 nmdc:mga08y16_13850_c1 3300050511 Bacteria 8488
341 nmdc:mga08y16_277837_c1 3300050511 Bacteria 1728
342 nmdc:mga0sz30_25114_c1 3300050516 Bacteria 2436
343 Ga0495655_0020532 3300053083 Bacteria 1484
344 Ga0495655_0056696 3300053083 Bacteria 1055
345 Ga0495595_0137582 3300053084 Bacteria 1197
346 Ga0495619_0069367 3300053085 Bacteria 2356
347 Ga0500641_0023147 3300053096 Bacteria 2386
348 Ga0500556_0001532 3300053104 Bacteria 9467
349 Ga0500593_000663 3300053117 Bacteria 13102
350 Ga0500573_0020893 3300053140 Bacteria 3749
351 Ga0501084_0039519 3300054114 Bacteria 3946
352 Ga0501084_0176434 3300054114 Bacteria 1804
353 Ga0501082_0007591 3300060353 Bacteria 9353
354 Ga0501082_0429723 3300060353 Bacteria 1153
355 Ga0466962_0006870 3300061719 Bacteria 5458
356 Ga0466962_0007831 3300061719 Bacteria 5124
357 Ga0466962_0123044 3300061719 Bacteria 1252
358 Ga0530510_0055388 3300061734 Bacteria 2865
359 Ga0530510_0064955 3300061734 Bacteria 2644
360 Ga0530510_0283022 3300061734 Bacteria 1239

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048903 Ga0496100_0066360 Ga0496100_0066360_155_1009 274
2 3300048907 Ga0496104_0014650 Ga0496104_0014650_2782_3636 274
3 3300048908 Ga0496105_0010401 Ga0496105_0010401_2347_3201 274
4 3300048909 Ga0496106_0411273 Ga0496106_0411273_187_1041 274
5 3300048910 Ga0496107_0000307 Ga0496107_0000307_23693_24547 274
6 3300006881 Ga0068865_100146203 Ga0068865_1001462032 280
7 3300009553 Ga0105249_10327593 Ga0105249_103275931 280
8 3300014326 Ga0157380_10162802 Ga0157380_101628021 280
9 3300050492 nmdc:mga0yw44_104189_c1 nmdc:mga0yw44_104189_c1_387_1355 280
10 3300048912 Ga0496109_0013346 Ga0496109_0013346_125_1000 281
11 3300005937 Ga0081455_10000061 Ga0081455_1000006196 285
12 3300049659 Ga0501214_004308 Ga0501214_004308_21_890 288
13 3300050516 nmdc:mga0sz30_25114_c1 nmdc:mga0sz30_25114_c1_83_1060 288
14 3300013104 Ga0157370_10526169 Ga0157370_105261691 289
15 3300048911 Ga0496108_0122036 Ga0496108_0122036_10_882 289
16 3300061734 Ga0530510_0283022 Ga0530510_0283022_54_1088 289
17 3300039437 Ga0436365_1493108 Ga0436365_1493108_204_1076 290
18 3300045976 Ga0466967_0056854 Ga0466967_0056854_35_907 290
19 3300046459 Ga0495629_0296510 Ga0495629_0296510_168_1043 290
20 3300046462 Ga0495651_0338428 Ga0495651_0338428_35_910 290
21 3300046809 Ga0495600_0178950 Ga0495600_0178950_96_971 290
22 3300048088 Ga0495602_0236501 Ga0495602_0236501_66_941 290
23 3300048913 Ga0496110_0047714 Ga0496110_0047714_1369_2244 290
24 3300048914 Ga0496111_0115805 Ga0496111_0115805_420_1295 290
25 3300048916 Ga0496113_0058898 Ga0496113_0058898_1923_2798 290
26 3300049581 Ga0501047_0151734 Ga0501047_0151734_128_1000 290
27 3300049583 Ga0501067_0005364 Ga0501067_0005364_5946_6818 290
28 3300049583 Ga0501067_0081411 Ga0501067_0081411_907_1779 290
29 3300049586 Ga0501070_0015637 Ga0501070_0015637_4268_5140 290
30 3300049586 Ga0501070_0020827 Ga0501070_0020827_3038_3913 290
31 3300049590 Ga0501074_0006951 Ga0501074_0006951_58_930 290
32 3300049593 Ga0501077_0010320 Ga0501077_0010320_4350_5222 290
33 3300049742 Ga0501080_0001505 Ga0501080_0001505_2301_3173 290
34 3300050492 nmdc:mga0yw44_206487_c1 nmdc:mga0yw44_206487_c1_76_951 290
35 3300053085 Ga0495619_0069367 Ga0495619_0069367_1180_2055 290
36 3300044694 Ga0466963_0127457 Ga0466963_0127457_518_1399 293
37 3300045976 Ga0466967_0117128 Ga0466967_0117128_192_1073 293
38 3300048904 Ga0496101_0132989 Ga0496101_0132989_25_909 293
39 3300048906 Ga0496103_0132829 Ga0496103_0132829_204_1088 293
40 3300048909 Ga0496106_0033926 Ga0496106_0033926_689_1573 293
41 3300048910 Ga0496107_0070073 Ga0496107_0070073_652_1536 293
42 3300048912 Ga0496109_0032749 Ga0496109_0032749_3062_3946 293
43 3300013307 Ga0157372_10424475 Ga0157372_104244752 294
44 3300044684 Ga0466966_0008071 Ga0466966_0008071_1550_2551 294
45 3300044765 Ga0466970_0037612 Ga0466970_0037612_103_1104 294
46 3300061719 Ga0466962_0007831 Ga0466962_0007831_3633_4634 294
47 3300013105 Ga0157369_10429393 Ga0157369_104293932 296
48 3300020069 Ga0197907_11497974 Ga0197907_114979741 296
49 3300020082 Ga0206353_11771831 Ga0206353_117718313 296
50 3300048909 Ga0496106_0315383 Ga0496106_0315383_42_950 297
51 3300048917 Ga0496114_0006853 Ga0496114_0006853_4641_5549 297
52 3300005329 Ga0070683_100018123 Ga0070683_1000181233 299
53 3300025944 Ga0207661_10015195 Ga0207661_100151951 299
54 3300026067 Ga0207678_10146135 Ga0207678_101461351 299
55 3300044706 Ga0466964_0079653 Ga0466964_0079653_418_1320 299
56 3300044901 Ga0466960_0003267 Ga0466960_0003267_234_1136 299
57 3300006048 Ga0075363_100105909 Ga0075363_1001059092 300
58 3300049568 Ga0501031_0002958 Ga0501031_0002958_5531_6481 300
59 3300049573 Ga0501037_0019040 Ga0501037_0019040_3963_4913 300
60 3300049574 Ga0501038_0006287 Ga0501038_0006287_4348_5298 300
61 3300049576 Ga0501040_0134445 Ga0501040_0134445_308_1258 300
62 3300049578 Ga0501042_0061259 Ga0501042_0061259_187_1137 300
63 3300049585 Ga0501069_0025248 Ga0501069_0025248_122_1072 300
64 3300049587 Ga0501071_0017633 Ga0501071_0017633_3825_4775 300
65 3300049592 Ga0501076_0075024 Ga0501076_0075024_1467_2417 300
66 3300049593 Ga0501077_0022435 Ga0501077_0022435_2744_3694 300
67 3300049741 Ga0501079_0059045 Ga0501079_0059045_1959_2909 300
68 3300054114 Ga0501084_0039519 Ga0501084_0039519_37_987 300
69 3300060353 Ga0501082_0429723 Ga0501082_0429723_162_1112 300
70 3300061734 Ga0530510_0064955 Ga0530510_0064955_370_1320 300
71 3300044683 Ga0466965_0013381 Ga0466965_0013381_1444_2352 301
72 3300044765 Ga0466970_0039104 Ga0466970_0039104_1109_2017 301
73 3300049571 Ga0501034_0068192 Ga0501034_0068192_2088_3005 301
74 3300049573 Ga0501037_0241078 Ga0501037_0241078_87_1004 301
75 3300049574 Ga0501038_0199628 Ga0501038_0199628_583_1500 301
76 3300049586 Ga0501070_0005637 Ga0501070_0005637_148_1065 301
77 3300049588 Ga0501072_0055754 Ga0501072_0055754_995_1912 301
78 3300049593 Ga0501077_0012412 Ga0501077_0012412_4218_5135 301
79 3300049742 Ga0501080_0007958 Ga0501080_0007958_427_1344 301
80 3300049744 Ga0501083_0009704 Ga0501083_0009704_5356_6273 301
81 3300060353 Ga0501082_0007591 Ga0501082_0007591_5355_6272 301
82 3300050489 nmdc:mga03683_33001_c1 nmdc:mga03683_33001_c1_839_1765 302
83 3300050492 nmdc:mga0yw44_94516_c1 nmdc:mga0yw44_94516_c1_772_1701 303
84 3300031824 Ga0307413_10261802 Ga0307413_102618021 304
85 3300048917 Ga0496114_0013685 Ga0496114_0013685_2203_3159 304
86 3300048918 Ga0496115_0003056 Ga0496115_0003056_8589_9545 304
87 3300013308 Ga0157375_10123070 Ga0157375_101230702 305
88 3300048911 Ga0496108_0280786 Ga0496108_0280786_489_1409 305
89 3300048913 Ga0496110_0294830 Ga0496110_0294830_259_1179 305
90 iso_pu_bacteria 2643221617 2644101647 305
91 iso_pu_bacteria 2643221620 2644115709 305
92 iso_pu_bacteria 2738541305 2738868258 305
93 iso_pu_bacteria 2643221604 2644035633 306
94 iso_pu_bacteria 2811994874 2812332690 306
95 3300037418 Ga0395900_0047031 Ga0395900_0047031_1137_2075 308
96 3300048913 Ga0496110_0226799 Ga0496110_0226799_712_1680 308
97 iso_pu_bacteria 2643221641 2644232201 308
98 iso_pu_bacteria 2773857762 2774392124 308
99 iso_pu_bacteria 2808606439 2809195912 308
100 iso_pu_bacteria 2811994878 2812351940 308
101 iso_pu_bacteria 2891968417 2891970415 308
102 iso_pu_bacteria 8054609563 8054612909 308
103 3300003578 Ga0006562J51391_1024882 Ga0006562J51391_10248822 309
104 iso_pu_bacteria 2643221576 2643891800 309
105 iso_pu_bacteria 2643221590 2643960849 309
106 iso_pu_bacteria 2643221615 2644089010 309
107 iso_pu_bacteria 2643221657 2644318855 309
108 iso_pu_bacteria 2739367898 2740169390 309
109 iso_pu_bacteria 2855386786 2855387096 309
110 iso_pu_bacteria 2857481737 2857482176 309
111 3300005445 Ga0070708_100399985 Ga0070708_1003999852 310
112 3300005471 Ga0070698_100008110 Ga0070698_1000081102 310
113 3300037418 Ga0395900_0156530 Ga0395900_0156530_403_1350 310
114 3300044683 Ga0466965_0055902 Ga0466965_0055902_21_968 310
115 3300025924 Ga0207694_10135885 Ga0207694_101358852 311
116 3300002075 JGI24738J21930_10002814 JGI24738J21930_100028144 312
117 3300002077 JGI24744J21845_10004133 JGI24744J21845_100041332 312
118 3300005327 Ga0070658_10033541 Ga0070658_100335412 312
119 3300005329 Ga0070683_100046941 Ga0070683_1000469412 312
120 3300005336 Ga0070680_100045008 Ga0070680_1000450083 312
121 3300005339 Ga0070660_100025535 Ga0070660_1000255354 312
122 3300005340 Ga0070689_100468810 Ga0070689_1004688101 312
123 3300005341 Ga0070691_10043659 Ga0070691_100436591 312
124 3300005345 Ga0070692_10003604 Ga0070692_100036042 312
125 3300005354 Ga0070675_100017128 Ga0070675_1000171282 312
126 3300005435 Ga0070714_100007882 Ga0070714_1000078822 312
127 3300005438 Ga0070701_10001816 Ga0070701_100018166 312
128 3300005441 Ga0070700_100002329 Ga0070700_1000023292 312
129 3300005457 Ga0070662_100189905 Ga0070662_1001899052 312
130 3300005459 Ga0068867_100020744 Ga0068867_1000207443 312
131 3300005535 Ga0070684_100159387 Ga0070684_1001593872 312
132 3300005543 Ga0070672_100024550 Ga0070672_1000245504 312
133 3300005616 Ga0068852_100117197 Ga0068852_1001171972 312
134 3300005616 Ga0068852_100170647 Ga0068852_1001706472 312
135 3300005719 Ga0068861_100003161 Ga0068861_1000031612 312
136 3300005840 Ga0068870_10084185 Ga0068870_100841851 312
137 3300006178 Ga0075367_10046879 Ga0075367_100468792 312
138 3300006237 Ga0097621_100303878 Ga0097621_1003038781 312
139 3300006881 Ga0068865_100032029 Ga0068865_1000320294 312
140 3300009094 Ga0111539_10037503 Ga0111539_100375035 312
141 3300009148 Ga0105243_10004223 Ga0105243_100042239 312
142 3300009545 Ga0105237_10110821 Ga0105237_101108212 312
143 3300009551 Ga0105238_10286268 Ga0105238_102862682 312
144 3300009553 Ga0105249_10094187 Ga0105249_100941872 312
145 3300010375 Ga0105239_10026839 Ga0105239_100268395 312
146 3300010375 Ga0105239_10499068 Ga0105239_104990681 312
147 3300011119 Ga0105246_10123348 Ga0105246_101233482 312
148 3300013307 Ga0157372_10127798 Ga0157372_101277982 312
149 3300013307 Ga0157372_10378378 Ga0157372_103783782 312
150 3300014325 Ga0163163_10044656 Ga0163163_100446564 312
151 3300014326 Ga0157380_10015963 Ga0157380_100159635 312
152 3300014745 Ga0157377_10004220 Ga0157377_100042204 312
153 3300025899 Ga0207642_10118906 Ga0207642_101189061 312
154 3300025901 Ga0207688_10036842 Ga0207688_100368422 312
155 3300025904 Ga0207647_10022446 Ga0207647_100224463 312
156 3300025908 Ga0207643_10016617 Ga0207643_100166173 312
157 3300025917 Ga0207660_10125704 Ga0207660_101257042 312
158 3300025919 Ga0207657_10043024 Ga0207657_100430242 312
159 3300025924 Ga0207694_10248217 Ga0207694_102482171 312
160 3300025924 Ga0207694_10257961 Ga0207694_102579612 312
161 3300025926 Ga0207659_10126013 Ga0207659_101260131 312
162 3300025927 Ga0207687_10027309 Ga0207687_100273091 312
163 3300025929 Ga0207664_10008825 Ga0207664_100088257 312
164 3300025933 Ga0207706_10187387 Ga0207706_101873872 312
165 3300025935 Ga0207709_10031485 Ga0207709_100314852 312
166 3300025936 Ga0207670_10411004 Ga0207670_104110041 312
167 3300025937 Ga0207669_10062399 Ga0207669_100623992 312
168 3300025940 Ga0207691_10001793 Ga0207691_100017939 312
169 3300025944 Ga0207661_10044148 Ga0207661_100441483 312
170 3300025961 Ga0207712_10158757 Ga0207712_101587572 312
171 3300026067 Ga0207678_10034989 Ga0207678_100349895 312
172 3300026075 Ga0207708_10001850 Ga0207708_1000185010 312
173 3300026089 Ga0207648_10004357 Ga0207648_100043574 312
174 3300026118 Ga0207675_100013712 Ga0207675_1000137126 312
175 3300026142 Ga0207698_10184162 Ga0207698_101841621 312
176 3300027907 Ga0207428_10033168 Ga0207428_100331682 312
177 3300031824 Ga0307413_10098137 Ga0307413_100981372 312
178 3300031995 Ga0307409_100186906 Ga0307409_1001869062 312
179 3300037068 Ga0373925_0513145 Ga0373925_0513145_17_970 312
180 3300037466 Ga0395898_0016967 Ga0395898_0016967_1426_2370 312
181 3300038443 Ga0395901_0049469 Ga0395901_0049469_1072_2016 312
182 3300044694 Ga0466963_0078100 Ga0466963_0078100_1122_2072 312
183 3300044694 Ga0466963_0161639 Ga0466963_0161639_480_1427 312
184 3300045976 Ga0466967_0002795 Ga0466967_0002795_9118_10068 312
185 3300048910 Ga0496107_0130555 Ga0496107_0130555_488_1429 312
186 3300048912 Ga0496109_0068110 Ga0496109_0068110_330_1277 312
187 3300048914 Ga0496111_0167160 Ga0496111_0167160_52_999 312
188 3300048917 Ga0496114_0196135 Ga0496114_0196135_763_1704 312
189 3300050492 nmdc:mga0yw44_131260_c1 nmdc:mga0yw44_131260_c1_278_1225 312
190 3300050511 nmdc:mga08y16_13850_c1 nmdc:mga08y16_13850_c1_4169_5116 312
191 3300050511 nmdc:mga08y16_277837_c1 nmdc:mga08y16_277837_c1_707_1654 312
192 3300053084 Ga0495595_0137582 Ga0495595_0137582_235_1182 312
193 3300061734 Ga0530510_0055388 Ga0530510_0055388_1861_2808 312
194 3300000549 LJQas_1002758 LJQas_10027582 313
195 3300005327 Ga0070658_10006110 Ga0070658_100061102 313
196 3300005329 Ga0070683_100293413 Ga0070683_1002934132 313
197 3300005337 Ga0070682_100008426 Ga0070682_1000084262 313
198 3300005339 Ga0070660_100124671 Ga0070660_1001246712 313
199 3300005343 Ga0070687_100191411 Ga0070687_1001914111 313
200 3300005345 Ga0070692_10039426 Ga0070692_100394262 313
201 3300005347 Ga0070668_100141741 Ga0070668_1001417412 313
202 3300005367 Ga0070667_100029869 Ga0070667_1000298697 313
203 3300005535 Ga0070684_100001477 Ga0070684_1000014775 313
204 3300005577 Ga0068857_100345592 Ga0068857_1003455922 313
205 3300005615 Ga0070702_100120889 Ga0070702_1001208891 313
206 3300005841 Ga0068863_100141569 Ga0068863_1001415692 313
207 3300005842 Ga0068858_100195000 Ga0068858_1001950002 313
208 3300005843 Ga0068860_100000490 Ga0068860_10000049018 313
209 3300005843 Ga0068860_100147784 Ga0068860_1001477842 313
210 3300005985 Ga0081539_10021498 Ga0081539_100214985 313
211 3300006038 Ga0075365_10000221 Ga0075365_1000022110 313
212 3300006038 Ga0075365_10027129 Ga0075365_100271292 313
213 3300006038 Ga0075365_10036043 Ga0075365_100360433 313
214 3300006038 Ga0075365_10048742 Ga0075365_100487421 313
215 3300006038 Ga0075365_10049569 Ga0075365_100495692 313
216 3300006038 Ga0075365_10080373 Ga0075365_100803733 313
217 3300006038 Ga0075365_10130512 Ga0075365_101305122 313
218 3300006042 Ga0075368_10000261 Ga0075368_100002614 313
219 3300006048 Ga0075363_100032276 Ga0075363_1000322762 313
220 3300006048 Ga0075363_100038435 Ga0075363_1000384352 313
221 3300006051 Ga0075364_10005307 Ga0075364_100053071 313
222 3300006051 Ga0075364_10045877 Ga0075364_100458772 313
223 3300006178 Ga0075367_10001494 Ga0075367_100014943 313
224 3300006178 Ga0075367_10017645 Ga0075367_100176452 313
225 3300006178 Ga0075367_10046981 Ga0075367_100469812 313
226 3300006237 Ga0097621_100308267 Ga0097621_1003082671 313
227 3300006353 Ga0075370_10010908 Ga0075370_100109083 313
228 3300006353 Ga0075370_10013343 Ga0075370_100133433 313
229 3300006881 Ga0068865_100072371 Ga0068865_1000723713 313
230 3300009094 Ga0111539_10324047 Ga0111539_103240472 313
231 3300009098 Ga0105245_10004528 Ga0105245_1000452812 313
232 3300009553 Ga0105249_10196292 Ga0105249_101962922 313
233 3300013296 Ga0157374_10485935 Ga0157374_104859351 313
234 3300013306 Ga0163162_10029430 Ga0163162_100294302 313
235 3300013307 Ga0157372_10122037 Ga0157372_101220372 313
236 3300014325 Ga0163163_10162381 Ga0163163_101623813 313
237 3300014968 Ga0157379_10043023 Ga0157379_100430232 313
238 3300017792 Ga0163161_10156321 Ga0163161_101563212 313
239 3300025901 Ga0207688_10015271 Ga0207688_100152713 313
240 3300025909 Ga0207705_10037478 Ga0207705_100374783 313
241 3300025927 Ga0207687_10015325 Ga0207687_100153254 313
242 3300025935 Ga0207709_10207682 Ga0207709_102076822 313
243 3300025938 Ga0207704_10005228 Ga0207704_100052284 313
244 3300025940 Ga0207691_10171429 Ga0207691_101714292 313
245 3300025949 Ga0207667_10315641 Ga0207667_103156411 313
246 3300025986 Ga0207658_10024865 Ga0207658_100248651 313
247 3300026023 Ga0207677_10085990 Ga0207677_100859902 313
248 3300026075 Ga0207708_10008990 Ga0207708_100089905 313
249 3300026088 Ga0207641_10130287 Ga0207641_101302872 313
250 3300026116 Ga0207674_10358619 Ga0207674_103586191 313
251 3300026118 Ga0207675_100047270 Ga0207675_1000472704 313
252 3300026118 Ga0207675_100556537 Ga0207675_1005565371 313
253 3300026121 Ga0207683_10211181 Ga0207683_102111812 313
254 3300026142 Ga0207698_10236496 Ga0207698_102364961 313
255 3300027866 Ga0209813_10003317 Ga0209813_100033172 313
256 3300027866 Ga0209813_10003321 Ga0209813_100033213 313
257 3300028379 Ga0268266_10000855 Ga0268266_1000085524 313
258 3300028381 Ga0268264_10000155 Ga0268264_1000015517 313
259 3300028381 Ga0268264_10092113 Ga0268264_100921132 313
260 3300030744 Ga0316181_1168304 Ga0316181_11683042 313
261 3300031901 Ga0307406_10371710 Ga0307406_103717101 313
262 3300031911 Ga0307412_10140521 Ga0307412_101405212 313
263 3300031995 Ga0307409_100048117 Ga0307409_1000481172 313
264 3300031995 Ga0307409_100100772 Ga0307409_1001007722 313
265 3300032004 Ga0307414_10225303 Ga0307414_102253032 313
266 3300032126 Ga0307415_100022407 Ga0307415_1000224073 313
267 3300032126 Ga0307415_100134651 Ga0307415_1001346512 313
268 3300032126 Ga0307415_100374294 Ga0307415_1003742942 313
269 3300035084 Ga0373928_0006965 Ga0373928_0006965_148_1092 313
270 3300037471 Ga0395905_0025063 Ga0395905_0025063_4658_5602 313
271 3300038443 Ga0395901_0126048 Ga0395901_0126048_570_1514 313
272 3300041498 Ga0451841_0803626 Ga0451841_0803626_320_1285 313
273 3300041509 Ga0451843_1095300 Ga0451843_1095300_705_1673 313
274 3300041512 Ga0451853_3912024 Ga0451853_3912024_572_1516 313
275 3300044683 Ga0466965_0007926 Ga0466965_0007926_3637_4635 313
276 3300044683 Ga0466965_0171100 Ga0466965_0171100_123_1100 313
277 3300044684 Ga0466966_0086469 Ga0466966_0086469_597_1541 313
278 3300044693 Ga0466961_0030541 Ga0466961_0030541_1278_2276 313
279 3300044694 Ga0466963_0025953 Ga0466963_0025953_2365_3309 313
280 3300044694 Ga0466963_0093427 Ga0466963_0093427_879_1844 313
281 3300044694 Ga0466963_0104896 Ga0466963_0104896_900_1844 313
282 3300044694 Ga0466963_0139925 Ga0466963_0139925_223_1221 313
283 3300044706 Ga0466964_0001429 Ga0466964_0001429_7179_8123 313
284 3300044706 Ga0466964_0031212 Ga0466964_0031212_468_1466 313
285 3300044719 Ga0466971_0003253 Ga0466971_0003253_168_1166 313
286 3300044765 Ga0466970_0004969 Ga0466970_0004969_1900_2892 313
287 3300044765 Ga0466970_0015975 Ga0466970_0015975_348_1292 313
288 3300044842 Ga0466957_0008762 Ga0466957_0008762_1343_2287 313
289 3300044842 Ga0466957_0010607 Ga0466957_0010607_917_1915 313
290 3300044901 Ga0466960_0023046 Ga0466960_0023046_520_1464 313
291 3300044901 Ga0466960_0067948 Ga0466960_0067948_632_1630 313
292 3300044901 Ga0466960_0094754 Ga0466960_0094754_229_1173 313
293 3300045049 Ga0466959_0206100 Ga0466959_0206100_218_1162 313
294 3300045051 Ga0451576_0138053 Ga0451576_0138053_839_1792 313
295 3300045836 Ga0466958_0031260 Ga0466958_0031260_939_1937 313
296 3300045976 Ga0466967_0253697 Ga0466967_0253697_70_1035 313
297 3300045976 Ga0466967_0435210 Ga0466967_0435210_180_1238 313
298 3300046500 Ga0495596_0076388 Ga0495596_0076388_78_1022 313
299 3300048905 Ga0496102_0180194 Ga0496102_0180194_376_1329 313
300 3300048905 Ga0496102_0191570 Ga0496102_0191570_231_1187 313
301 3300048905 Ga0496102_0416636 Ga0496102_0416636_56_1012 313
302 3300048906 Ga0496103_0013870 Ga0496103_0013870_767_1720 313
303 3300048906 Ga0496103_0056051 Ga0496103_0056051_1146_2102 313
304 3300048908 Ga0496105_0019473 Ga0496105_0019473_564_1520 313
305 3300048909 Ga0496106_0158607 Ga0496106_0158607_33_986 313
306 3300048909 Ga0496106_0262790 Ga0496106_0262790_78_1022 313
307 3300048910 Ga0496107_0123606 Ga0496107_0123606_339_1292 313
308 3300048911 Ga0496108_0012732 Ga0496108_0012732_2546_3499 313
309 3300048912 Ga0496109_0049722 Ga0496109_0049722_900_1856 313
310 3300048912 Ga0496109_0098241 Ga0496109_0098241_125_1078 313
311 3300048913 Ga0496110_0024723 Ga0496110_0024723_1908_2861 313
312 3300048914 Ga0496111_0003546 Ga0496111_0003546_1817_2770 313
313 3300048917 Ga0496114_0003667 Ga0496114_0003667_150_1106 313
314 3300048917 Ga0496114_0149406 Ga0496114_0149406_223_1179 313
315 3300048918 Ga0496115_0056269 Ga0496115_0056269_1680_2636 313
316 3300048927 Ga0496124_0054890 Ga0496124_0054890_1734_2693 313
317 3300049568 Ga0501031_0085895 Ga0501031_0085895_278_1228 313
318 3300049568 Ga0501031_0168075 Ga0501031_0168075_377_1378 313
319 3300049569 Ga0501032_0005244 Ga0501032_0005244_4128_5078 313
320 3300049570 Ga0501033_0003239 Ga0501033_0003239_3705_4655 313
321 3300049571 Ga0501034_0176412 Ga0501034_0176412_719_1675 313
322 3300049571 Ga0501034_0197104 Ga0501034_0197104_788_1738 313
323 3300049572 Ga0501036_0022802 Ga0501036_0022802_23_973 313
324 3300049572 Ga0501036_0117320 Ga0501036_0117320_792_1763 313
325 3300049572 Ga0501036_0121165 Ga0501036_0121165_42_998 313
326 3300049572 Ga0501036_0436549 Ga0501036_0436549_106_1074 313
327 3300049573 Ga0501037_0005739 Ga0501037_0005739_907_1857 313
328 3300049573 Ga0501037_0024513 Ga0501037_0024513_1544_2512 313
329 3300049573 Ga0501037_0155312 Ga0501037_0155312_111_1055 313
330 3300049574 Ga0501038_0016476 Ga0501038_0016476_1059_2009 313
331 3300049574 Ga0501038_0199916 Ga0501038_0199916_388_1338 313
332 3300049575 Ga0501039_0031299 Ga0501039_0031299_1937_2905 313
333 3300049575 Ga0501039_0060434 Ga0501039_0060434_1666_2616 313
334 3300049575 Ga0501039_0266531 Ga0501039_0266531_227_1228 313
335 3300049576 Ga0501040_0126262 Ga0501040_0126262_22_993 313
336 3300049578 Ga0501042_0094099 Ga0501042_0094099_175_1122 313
337 3300049582 Ga0501048_0003081 Ga0501048_0003081_922_1872 313
338 3300049582 Ga0501048_0057016 Ga0501048_0057016_1199_2149 313
339 3300049582 Ga0501048_0066143 Ga0501048_0066143_1283_2227 313
340 3300049584 Ga0501068_0158857 Ga0501068_0158857_31_984 313
341 3300049585 Ga0501069_0100229 Ga0501069_0100229_653_1612 313
342 3300049585 Ga0501069_0138073 Ga0501069_0138073_132_1076 313
343 3300049585 Ga0501069_0190135 Ga0501069_0190135_42_1001 313
344 3300049586 Ga0501070_0121961 Ga0501070_0121961_899_1849 313
345 3300049586 Ga0501070_0249480 Ga0501070_0249480_274_1269 313
346 3300049589 Ga0501073_0314266 Ga0501073_0314266_34_984 313
347 3300049590 Ga0501074_0092842 Ga0501074_0092842_1006_1956 313
348 3300049592 Ga0501076_0025591 Ga0501076_0025591_1772_2716 313
349 3300049742 Ga0501080_0101066 Ga0501080_0101066_885_1835 313
350 3300049742 Ga0501080_0281571 Ga0501080_0281571_262_1221 313
351 3300049822 Ga0501035_0004064 Ga0501035_0004064_38_988 313
352 3300049822 Ga0501035_0079693 Ga0501035_0079693_1186_2136 313
353 3300049822 Ga0501035_0117710 Ga0501035_0117710_511_1455 313
354 3300049822 Ga0501035_0340086 Ga0501035_0340086_141_1109 313
355 3300049824 Ga0501045_0239650 Ga0501045_0239650_193_1161 313
356 3300049824 Ga0501045_0404862 Ga0501045_0404862_34_984 313
357 3300050490 nmdc:mga03n38_25726_c1 nmdc:mga03n38_25726_c1_640_1599 313
358 3300050491 nmdc:mga00v17_86011_c1 nmdc:mga00v17_86011_c1_464_1432 313
359 3300050491 nmdc:mga00v17_9082_c1 nmdc:mga00v17_9082_c1_1211_2170 313
360 3300050492 nmdc:mga0yw44_10027_c1 nmdc:mga0yw44_10027_c1_3161_4117 313
361 3300050492 nmdc:mga0yw44_10640_c1 nmdc:mga0yw44_10640_c1_2573_3529 313
362 3300050492 nmdc:mga0yw44_171697_c1 nmdc:mga0yw44_171697_c1_310_1269 313
363 3300050492 nmdc:mga0yw44_17284_c1 nmdc:mga0yw44_17284_c1_1529_2488 313
364 3300050492 nmdc:mga0yw44_48572_c1 nmdc:mga0yw44_48572_c1_1576_2535 313
365 3300050494 nmdc:mga06z11_12371_c1 nmdc:mga06z11_12371_c1_1869_2828 313
366 3300050495 nmdc:mga04h51_6357_c1 nmdc:mga04h51_6357_c1_60_1016 313
367 3300050496 nmdc:mga07m45_1520_c1 nmdc:mga07m45_1520_c1_426_1385 313
368 3300050496 nmdc:mga07m45_33533_c1 nmdc:mga07m45_33533_c1_234_1214 313
369 3300050496 nmdc:mga07m45_88907_c1 nmdc:mga07m45_88907_c1_359_1315 313
370 3300053083 Ga0495655_0020532 Ga0495655_0020532_359_1303 313
371 3300053083 Ga0495655_0056696 Ga0495655_0056696_23_985 313
372 3300053096 Ga0500641_0023147 Ga0500641_0023147_85_1044 313
373 3300053104 Ga0500556_0001532 Ga0500556_0001532_64_1008 313
374 3300053117 Ga0500593_000663 Ga0500593_000663_2623_3603 313
375 3300053140 Ga0500573_0020893 Ga0500573_0020893_774_1730 313
376 3300054114 Ga0501084_0176434 Ga0501084_0176434_691_1659 313
377 3300061719 Ga0466962_0006870 Ga0466962_0006870_19_963 313
378 3300061719 Ga0466962_0123044 Ga0466962_0123044_118_1092 313
379 iso_pu_bacteria 2643221696 2644532006 313
380 iso_pu_bacteria 2984576629 2984580238 313
381 iso_pu_bacteria 2990256926 2990259088 313

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01040

UbiA

UbiA prenyltransferase family

81

337

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.7902 23 312
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.7853 23 312
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7309 39 311
4tq4-assembly3.cif.gz_C structure of a ubia homolog from archaeoglobus fulgidus bound to dmapp and mg2+ 0.7239 27 305
4tq3-assembly1.cif.gz_A structure of a ubia homolog from archaeoglobus fulgidus bound to gpp and mg2+ 0.7217 28 305
ID Description Score Start End Superfamily
af_P9WFR7_179_308_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.9449 184 311 1.20.120.550
af_P0AEA5_14_182_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9334 37 202 1.10.357.140
af_P9WFR7_30_178_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9253 35 181 1.10.357.140
af_P0AEA5_14_182_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9124 37 202 1.10.357.140
af_P9WFR7_30_178_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.9076 35 181 1.10.357.140
ID Description Score Start End GO Terms
AF-A0A3T0RYD7-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9674 22 312 GO:0005886
GO:0008495
GO:0048034
AF-A0A5J6TZX1-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9635 22 312 GO:0005886
GO:0008495
GO:0048034
AF-A0A4Q5TG01-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9629 11 312 GO:0005886
GO:0008495
GO:0048034
AF-A0A6L6C7F4-F1-model_v4 Heme o synthase (EC 2.5.1.141) 0.9622 24 237 GO:0005886
GO:0006783
GO:0008495
AF-A0A542YSQ7-F1-model_v4 Protoheme IX farnesyltransferase (EC 2.5.1.141) (Heme B farnesyltransferase) (Heme O synthase) 0.9613 25 312 GO:0005886
GO:0008495
GO:0048034

Feature Viewer

pLDDT pTM Quality
87.03 0.83 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map