F429156

General Info

Members Datasets Scaffolds Average Seq Length
382 245 324 449

Family's Representative Sequence

Representative Sequence 3300003323|rootH1_10022063|rootH1_100220632
Length 508
Sequence LYHTGDSDGDNVETSLEVSDWRLGKKKLENGIGGVKNIGEIKKVKMDQDNKISNQSTPFPSDGAARLVILGAGESGVGAAYLAQQQGFDVFVSDFGGIADNYKKQLEDWKIPFEEKQHTEELILNAVEVIKSPGIPDKAPIIKKLHEKGTSVISEIEFAGRYTDAKIIGITGSNGKTTTTSLTYHILKDAGMNVGLAGNIGKSFAYQVATEKFDWYVLELSSFMLDDMFRFKVDIAVLLNITPDHLDRYDYKLENYAASKFRIAQNQTAADYFIYCADDPETIKGMKERTFGAQLLPFSIQQKFEPGAYLDSNDNIVINTTQEHFTMSIQDLALQGKHNIYNSMASGIVAKVLELRNETMRESMGNFKSIEHRLEFVANISGIRFINDSKATNVNSTWYALESMTSDVVLILGGVDKGNDYSMLNDLVKQKVKAIVCLGKDNKRIHEAFDDMVEIIVNTSSAQEAATVAYHLATKGDTVLLSPACASFDLFKNYEDRGDQFKAAVKEL

Samples

Sample ID Description Type Environment
1 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
5 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
6 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
7 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
8 2738541283 Pedobacter sp. OK701 Isolate Unclassified
9 2738541284 Pedobacter sp. YR016 Isolate Unclassified
10 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
11 2738541302 Pedobacter sp. CF074 Isolate Unclassified
12 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
13 2738543023 Pedobacter sp. OK628 Isolate Unclassified
14 2739367651 Pedobacter sp. OK291 Isolate Unclassified
15 2739367656 Pedobacter sp. CF523 Isolate Unclassified
16 2739367663 Pedobacter sp. YR510 Isolate Unclassified
17 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
18 2818991437 Pedobacter terrae 518 Isolate Unclassified
19 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
20 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
21 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
22 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
23 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
24 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
25 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
26 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
27 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
28 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
29 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
30 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
31 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
32 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
33 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
34 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
35 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
36 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
37 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
38 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
39 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
40 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
41 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
42 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
43 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
44 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
45 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
46 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
47 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
48 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
49 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
50 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
51 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
52 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
53 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
54 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
55 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
56 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
57 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
58 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
59 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
60 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
61 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
62 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
63 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
64 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
65 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
66 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
67 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
68 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
69 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
70 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
71 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
72 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
73 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
74 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
75 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
76 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
77 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
78 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
79 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
80 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
81 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
82 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
83 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
84 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
85 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
86 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
87 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
88 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
89 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
90 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
91 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
92 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
93 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
94 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
95 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
96 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
97 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
98 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
99 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
100 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
101 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
102 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
103 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
104 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
105 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
106 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
107 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
108 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
109 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
110 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
111 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
112 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
113 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
114 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
115 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
116 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
117 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
118 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
119 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
120 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
121 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
122 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
123 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
124 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
125 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
126 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
127 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
128 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
129 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
131 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
133 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
134 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
135 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
136 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
151 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
152 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
153 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
154 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
155 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
156 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
157 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
158 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
159 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
160 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
161 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
162 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
163 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
164 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
165 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
166 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
167 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
168 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
169 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
170 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
171 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
172 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
173 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
174 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
175 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
176 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
177 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
178 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
179 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
180 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
181 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
182 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
183 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
184 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
185 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
186 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
187 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
188 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
189 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
190 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
191 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
192 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
193 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
194 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
195 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
196 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
197 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
198 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
199 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
200 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
201 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
202 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
203 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
204 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
205 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
206 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
207 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
208 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
209 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
210 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
211 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
212 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
213 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
214 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
215 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
216 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
217 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
218 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
219 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
220 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
221 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
222 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
223 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
224 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
225 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
226 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
227 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
228 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
229 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
230 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
231 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
232 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
233 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
234 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
235 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
236 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
237 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
238 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
239 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
240 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
241 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
242 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
243 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
244 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
245 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.55
Metatranscriptomes 0.26
Isolates 15.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.38
Nodule 0
Rhizoplane 1.31
Rhizosphere 71.2
Stem 0
Stem Tuber 0
Unclassified 19.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1002029 3300001904 Bacteria 3601
2 JGI24739J22299_10024049 3300001989 Bacteria 2150
3 JGI24735J21928_10000003 3300002067 Bacteria 385983
4 JGI25150J39212_1000001 3300002774 Bacteria 1318726
5 JGI25151J46595_10000001 3300003187 Bacteria 887211
6 JGI25153J46596_10000001 3300003215 Bacteria 748985
7 rootH1_10000289 3300003316 Bacteria 2676
8 rootH1_10009704 3300003316 Bacteria 10179
9 rootH1_10018147 3300003316 Bacteria 3048
10 rootH1_10021265 3300003316 Bacteria 13590
11 rootH2_10002043 3300003320 Bacteria 24164
12 rootH2_10002710 3300003320 Bacteria 13202
13 rootH2_10278851 3300003320 Bacteria 3906
14 rootL2_10001878 3300003322 Bacteria 8489
15 rootL2_10006643 3300003322 Bacteria 13952
16 rootL2_10037229 3300003322 Bacteria 2195
17 rootL2_10037559 3300003322 Bacteria 9063
18 rootL2_10067693 3300003322 Bacteria 4095
19 rootH1_10002142 3300003323 Bacteria 12293
20 rootH1_10022063 3300003323 Bacteria 3369
21 rootH1_10023770 3300003323 Bacteria 3130
22 rootH1_10040420 3300003323 Bacteria 24093
23 rootH1_10132388 3300003323 Bacteria 3326
24 rootH1_10148340 3300003323 Bacteria 5679
25 rootH1_10212425 3300003323 Bacteria 3643
26 Ga0006562J51391_1007085 3300003578 Bacteria 16073
27 Ga0055535_1003583 3300003761 Bacteria 4293
28 Ga0055542_1003004 3300003762 Bacteria 4909
29 Ga0055531_10000132 3300003794 Bacteria 85251
30 Ga0065165_1002613 3300005262 Bacteria 14716
31 Ga0065714_10006679 3300005288 Bacteria 4470
32 Ga0065714_10065033 3300005288 Bacteria 13724
33 Ga0065714_10081393 3300005288 Bacteria 2378
34 Ga0065714_10099919 3300005288 Bacteria 1676
35 Ga0065704_10073804 3300005289 Bacteria 6772
36 Ga0065715_10104966 3300005293 Bacteria 2903
37 Ga0070690_100010019 3300005330 Bacteria 5502
38 Ga0070682_100057223 3300005337 Bacteria 2455
39 Ga0070660_100029394 3300005339 Bacteria 4119
40 Ga0070689_100048477 3300005340 Bacteria 3276
41 Ga0070692_10003237 3300005345 Bacteria 6557
42 Ga0070669_100089945 3300005353 Bacteria 2300
43 Ga0070688_100044856 3300005365 Bacteria 2729
44 Ga0070659_100004393 3300005366 Bacteria 10069
45 Ga0070659_100013986 3300005366 Bacteria 5989
46 Ga0070709_10103017 3300005434 Bacteria 1905
47 Ga0070714_100132163 3300005435 Bacteria 2231
48 Ga0070694_100017293 3300005444 Bacteria 4554
49 Ga0070708_100190833 3300005445 Bacteria 1916
50 Ga0070686_100013974 3300005544 Bacteria 4613
51 Ga0068855_100147909 3300005563 Bacteria 2673
52 Ga0068857_100008626 3300005577 Bacteria 8821
53 Ga0068857_100063372 3300005577 Bacteria 3286
54 Ga0068856_100014051 3300005614 Bacteria 7742
55 Ga0068856_100033109 3300005614 Bacteria 5061
56 Ga0068859_100046976 3300005617 Bacteria 4336
57 Ga0068860_100001312 3300005843 Bacteria 27012
58 Ga0068862_100000481 3300005844 Bacteria 42686
59 Ga0070716_100022337 3300006173 Bacteria 3343
60 Ga0075366_10022016 3300006195 Bacteria 3705
61 Ga0075366_10031870 3300006195 Bacteria 3103
62 Ga0075428_100004617 3300006844 Bacteria 15234
63 Ga0075428_100020061 3300006844 Bacteria 7402
64 Ga0075430_100159474 3300006846 Bacteria 1878
65 Ga0075433_10007623 3300006852 Bacteria 8594
66 Ga0075434_100002884 3300006871 Bacteria 15262
67 Ga0097620_100046976 3300006931 Bacteria 4336
68 Ga0105244_10000508 3300009036 Bacteria 34770
69 Ga0111539_10002785 3300009094 Bacteria 23212
70 Ga0111539_10219382 3300009094 Unclassified 2215
71 Ga0105247_10013962 3300009101 Bacteria 4816
72 Ga0114129_10035162 3300009147 Bacteria 7080
73 Ga0105237_10001125 3300009545 Bacteria 35877
74 Ga0105237_10126657 3300009545 Bacteria 2548
75 Ga0105238_10238034 3300009551 Bacteria 1798
76 Ga0105249_10000240 3300009553 Bacteria 61072
77 Ga0105249_10041462 3300009553 Bacteria 4185
78 Ga0105239_10067481 3300010375 Bacteria 3929
79 Ga0105246_10005241 3300011119 Bacteria 7883
80 Ga0157373_10003119 3300013100 Bacteria 12523
81 Ga0157373_10004594 3300013100 Bacteria 10387
82 Ga0157371_10000922 3300013102 Bacteria 32992
83 Ga0157371_10003622 3300013102 Bacteria 13904
84 Ga0157371_10009098 3300013102 Bacteria 7848
85 Ga0157371_10016651 3300013102 Bacteria 5479
86 Ga0157370_10000693 3300013104 Bacteria 42077
87 Ga0157370_10006335 3300013104 Bacteria 13076
88 Ga0157370_10094941 3300013104 Bacteria 2798
89 Ga0157370_10099474 3300013104 Bacteria 2726
90 Ga0157370_10222405 3300013104 Bacteria 1748
91 Ga0157369_10002379 3300013105 Bacteria 22602
92 Ga0157369_10192135 3300013105 Bacteria 2145
93 Ga0157369_10244444 3300013105 Bacteria 1874
94 Ga0157378_10041394 3300013297 Bacteria 4086
95 Ga0157378_10113029 3300013297 Bacteria 2492
96 Ga0163162_10000558 3300013306 Bacteria 34481
97 Ga0157372_10001702 3300013307 Bacteria 23833
98 Ga0157372_10003174 3300013307 Bacteria 17725
99 Ga0157372_10165617 3300013307 Bacteria 2556
100 Ga0157372_10266423 3300013307 Bacteria 1990
101 Ga0157375_10020008 3300013308 Bacteria 6105
102 Ga0182008_10000006 3300014497 Bacteria 378521
103 Ga0182008_10000769 3300014497 Bacteria 22485
104 Ga0182008_10003358 3300014497 Bacteria 9716
105 Ga0182006_1000361 3300015261 Bacteria 37999
106 Ga0182006_1000878 3300015261 Bacteria 20215
107 Ga0182006_1002059 3300015261 Bacteria 11276
108 Ga0182006_1002552 3300015261 Bacteria 9867
109 Ga0182006_1003500 3300015261 Bacteria 8008
110 Ga0182007_10000033 3300015262 Bacteria 139808
111 Ga0182005_1000209 3300015265 Bacteria 38801
112 Ga0183373_1001 3300015682 Bacteria 1410374
113 Ga0163161_10000083 3300017792 Bacteria 94571
114 Ga0163161_10000085 3300017792 Bacteria 93534
115 Ga0163161_10003986 3300017792 Bacteria 10347
116 Ga0163161_10008376 3300017792 Bacteria 7158
117 Ga0213876_10004675 3300021384 Bacteria 7627
118 Ga0213875_10010860 3300021388 Bacteria 4553
119 Ga0209437_100743 3300025233 Bacteria 16153
120 Ga0209258_100075 3300025242 Bacteria 270751
121 Ga0207425_1000002 3300025245 Bacteria 1362590
122 Ga0209148_1000085 3300025254 Bacteria 265193
123 Ga0209129_1000002 3300025258 Bacteria 1359086
124 Ga0209676_1000008 3300025292 Bacteria 991778
125 Ga0209025_1000004 3300025294 Bacteria 1361782
126 Ga0209758_1000006 3300025297 Bacteria 1359562
127 Ga0209050_1000055 3300025298 Bacteria 339254
128 Ga0209050_1002341 3300025298 Bacteria 16605
129 Ga0209257_1000004 3300025304 Bacteria 1678347
130 Ga0207655_1000045 3300025728 Bacteria 315397
131 Ga0207647_10000035 3300025904 Bacteria 99177
132 Ga0207671_10001589 3300025914 Bacteria 25825
133 Ga0207693_10005858 3300025915 Bacteria 10196
134 Ga0207657_10039909 3300025919 Bacteria 4165
135 Ga0207690_10000519 3300025932 Bacteria 25069
136 Ga0207690_10010138 3300025932 Bacteria 5596
137 Ga0207667_10122781 3300025949 Bacteria 2676
138 Ga0207712_10000196 3300025961 Bacteria 61501
139 Ga0207702_10025059 3300026078 Bacteria 4949
140 Ga0207702_10081756 3300026078 Bacteria 2806
141 Ga0207698_10006709 3300026142 Bacteria 7192
142 Ga0268265_10000309 3300028380 Bacteria 54201
143 Ga0268264_10001117 3300028381 Bacteria 26438
144 Ga0307515_10016961 3300028794 Bacteria 13306
145 Ga0307515_10031774 3300028794 Bacteria 8778
146 Ga0307515_10034033 3300028794 Bacteria 8363
147 Ga0265338_10001695 3300028800 Bacteria 35004
148 Ga0265338_10055865 3300028800 Bacteria 3508
149 Ga0265338_10111152 3300028800 Bacteria 2207
150 Ga0316182_1185432 3300030745 Bacteria 1578
151 Ga0265327_10000010 3300031251 Bacteria 566817
152 Ga0265327_10000935 3300031251 Bacteria 42778
153 Ga0265327_10002725 3300031251 Bacteria 18043
154 Ga0265327_10006215 3300031251 Bacteria 9627
155 Ga0265327_10038040 3300031251 Bacteria 2629
156 Ga0265327_10050101 3300031251 Bacteria 2187
157 Ga0307513_10094863 3300031456 Bacteria 3027
158 Ga0307408_100001461 3300031548 Bacteria 17549
159 Ga0307408_100004451 3300031548 Bacteria 9515
160 Ga0307408_100006688 3300031548 Bacteria 7646
161 Ga0307408_100014380 3300031548 Bacteria 5257
162 Ga0316579_10009643 3300031691 Bacteria 4065
163 Ga0316579_10021242 3300031691 Bacteria 2890
164 Ga0316576_10032751 3300031727 Bacteria 3695
165 Ga0316576_10056586 3300031727 Bacteria 2864
166 Ga0316576_10083004 3300031727 Bacteria 2380
167 Ga0316576_10181101 3300031727 Bacteria 1589
168 Ga0316578_10038977 3300031728 Bacteria 2743
169 Ga0307405_10000003 3300031731 Bacteria 569064
170 Ga0307405_10060329 3300031731 Bacteria 2393
171 Ga0316577_10036384 3300031733 Bacteria 2753
172 Ga0316577_10055339 3300031733 Bacteria 2214
173 Ga0307410_10000085 3300031852 Bacteria 31342
174 Ga0307406_10000029 3300031901 Bacteria 87707
175 Ga0307407_10000010 3300031903 Bacteria 186970
176 Ga0307412_10000055 3300031911 Bacteria 147100
177 Ga0307412_10008500 3300031911 Bacteria 5865
178 Ga0307416_100000014 3300032002 Bacteria 249053
179 Ga0307414_10000005 3300032004 Bacteria 452161
180 Ga0307414_10001118 3300032004 Bacteria 13706
181 Ga0316580_10033434 3300032139 Bacteria 1592
182 Ga0307507_10000883 3300033179 Bacteria 66623
183 Ga0307510_10014167 3300033180 Bacteria 9441
184 Ga0373933_0037398 3300035724 Bacteria 2847
185 Ga0316582_0019485 3300036647 Bacteria 3972
186 Ga0316582_0057336 3300036647 Bacteria 2488
187 Ga0316582_0178718 3300036647 Bacteria 1443
188 Ga0316584_0000768 3300036712 Bacteria 17907
189 Ga0316584_0000878 3300036712 Bacteria 17097
190 Ga0316584_0014741 3300036712 Bacteria 5578
191 Ga0395905_0000001 3300037471 Bacteria 2037079
192 Ga0395905_0011375 3300037471 Bacteria 8603
193 Ga0395905_0068018 3300037471 Bacteria 3337
194 Ga0436364_0240449 3300037853 Bacteria 25321
195 Ga0395901_0003573 3300038443 Bacteria 15682
196 Ga0395901_0170493 3300038443 Unclassified 2284
197 Ga0395901_0195817 3300038443 Bacteria 2119
198 Ga0400483_217432 3300039062 Bacteria 35275
199 Ga0400489_31646 3300039093 Bacteria 6770
200 Ga0436365_0641960 3300039437 Bacteria 1663
201 Ga0436360_0326378 3300039438 Bacteria 2834
202 Ga0436360_1257418 3300039438 Bacteria 18618
203 Ga0436361_0471349 3300039447 Bacteria 7193
204 Ga0436362_0628733 3300039453 Bacteria 6821
205 Ga0436362_0705629 3300039453 Bacteria 1404
206 Ga0451577_0000027 3300042876 Bacteria 397014
207 Ga0451577_0002562 3300042876 Bacteria 21462
208 Ga0451577_0009360 3300042876 Bacteria 9441
209 Ga0451577_0012663 3300042876 Bacteria 7914
210 Ga0451577_0012837 3300042876 Bacteria 7863
211 Ga0451577_0013580 3300042876 Bacteria 7616
212 Ga0451577_0021525 3300042876 Bacteria 5900
213 Ga0451577_0263097 3300042876 Bacteria 1562
214 Ga0453683_0000022 3300044673 Bacteria 269593
215 Ga0453683_0000133 3300044673 Bacteria 108537
216 Ga0453683_0000146 3300044673 Bacteria 103930
217 Ga0453683_0000387 3300044673 Bacteria 52470
218 Ga0453683_0012158 3300044673 Bacteria 5648
219 Ga0453683_0045327 3300044673 Bacteria 2757
220 Ga0453683_0051806 3300044673 Bacteria 2571
221 Ga0453683_0054414 3300044673 Bacteria 2504
222 Ga0453684_0000051 3300044712 Bacteria 551033
223 Ga0453684_0000133 3300044712 Bacteria 329529
224 Ga0453684_0000154 3300044712 Bacteria 305062
225 Ga0453684_0000213 3300044712 Bacteria 253663
226 Ga0453684_0000394 3300044712 Bacteria 179687
227 Ga0453684_0000846 3300044712 Bacteria 103225
228 Ga0453684_0001000 3300044712 Bacteria 91796
229 Ga0453684_0011621 3300044712 Bacteria 14705
230 Ga0453684_0032677 3300044712 Bacteria 7273
231 Ga0453684_0050476 3300044712 Bacteria 5471
232 Ga0453684_0058609 3300044712 Bacteria 4973
233 Ga0453684_0064687 3300044712 Bacteria 4670
234 Ga0453684_0082227 3300044712 Bacteria 4013
235 Ga0453684_0090390 3300044712 Bacteria 3783
236 Ga0453684_0097959 3300044712 Unclassified 3597
237 Ga0453684_0210373 3300044712 Bacteria 2261
238 Ga0453684_0301540 3300044712 Bacteria 1821
239 Ga0466957_0115428 3300044842 Bacteria 1707
240 Ga0451576_0000032 3300045051 Bacteria 397014
241 Ga0451576_0000097 3300045051 Bacteria 220569
242 Ga0451576_0000175 3300045051 Bacteria 161976
243 Ga0451576_0000403 3300045051 Bacteria 100887
244 Ga0451576_0006434 3300045051 Bacteria 14402
245 Ga0451576_0011103 3300045051 Bacteria 10274
246 Ga0451576_0011426 3300045051 Bacteria 10088
247 Ga0451576_0013758 3300045051 Bacteria 9039
248 Ga0451576_0056265 3300045051 Bacteria 4114
249 Ga0451576_0084463 3300045051 Bacteria 3303
250 Ga0451576_0112529 3300045051 Bacteria 2833
251 Ga0495627_004906 3300046453 Bacteria 5503
252 Ga0495638_0000005 3300046460 Bacteria 680627
253 Ga0495653_0132054 3300046463 Bacteria 1766
254 Ga0495650_0000107 3300046471 Bacteria 200864
255 Ga0495585_0000014 3300046492 Bacteria 187513
256 Ga0495585_0004806 3300046492 Bacteria 8681
257 Ga0495607_0042007 3300046501 Bacteria 2713
258 Ga0495583_0060055 3300046506 Bacteria 1701
259 Ga0495606_0000192 3300046507 Bacteria 107123
260 Ga0495606_0004518 3300046507 Bacteria 13848
261 Ga0495606_0034428 3300046507 Bacteria 3478
262 Ga0495606_0049242 3300046507 Bacteria 2765
263 Ga0495610_0000051 3300046512 Bacteria 143715
264 Ga0495610_0006214 3300046512 Bacteria 8286
265 Ga0495610_0006245 3300046512 Bacteria 8261
266 Ga0495616_0000777 3300046513 Bacteria 23331
267 Ga0495643_0000586 3300046522 Bacteria 44354
268 Ga0495648_0006785 3300046524 Bacteria 9257
269 Ga0495654_0088525 3300046530 Bacteria 1440
270 Ga0495640_0100187 3300046533 Bacteria 1903
271 Ga0495633_0000015 3300046558 Bacteria 254484
272 Ga0495633_0000022 3300046558 Bacteria 226582
273 Ga0495667_0008348 3300046559 Bacteria 7024
274 Ga0495668_0000041 3300046616 Bacteria 229462
275 Ga0495625_0000021 3300046660 Bacteria 282133
276 Ga0495625_0001041 3300046660 Bacteria 36452
277 Ga0495625_0002514 3300046660 Bacteria 19739
278 Ga0495661_0026645 3300046665 Bacteria 3721
279 Ga0495657_0020209 3300046675 Bacteria 4789
280 Ga0495646_0008337 3300046680 Bacteria 6592
281 Ga0495658_0014143 3300046683 Bacteria 4071
282 Ga0495649_0000009 3300046694 Bacteria 451725
283 Ga0495604_0007179 3300047317 Bacteria 8823
284 Ga0495687_003536 3300047443 Bacteria 11245
285 Ga0495684_0017294 3300047471 Bacteria 5551
286 Ga0495686_0007909 3300047472 Bacteria 7896
287 Ga0495593_0079763 3300047673 Bacteria 1694
288 Ga0496108_0184126 3300048911 Bacteria 1809
289 Ga0496112_0049678 3300048915 Bacteria 4111
290 Ga0496113_0057818 3300048916 Bacteria 2916
291 Ga0496114_0125895 3300048917 Bacteria 2209
292 Ga0496116_0000212 3300048919 Bacteria 109276
293 Ga0496121_0000010 3300048924 Bacteria 793488
294 Ga0496122_0000404 3300048925 Bacteria 91618
295 Ga0496123_0002530 3300048926 Bacteria 22414
296 Ga0496124_0048745 3300048927 Bacteria 3617
297 Ga0496125_0000062 3300048928 Bacteria 259277
298 Ga0496126_0021154 3300048929 Bacteria 6361
299 Ga0501300_002189 3300049523 Bacteria 2915
300 Ga0501034_0022807 3300049571 Bacteria 6377
301 Ga0501047_0026163 3300049581 Bacteria 5613
302 Ga0501223_000184 3300049663 Bacteria 16387
303 Ga0501236_000068 3300049670 Bacteria 9344
304 Ga0501249_000005 3300049679 Bacteria 225972
305 Ga0501257_004628 3300049686 Bacteria 3007
306 Ga0501257_012228 3300049686 Bacteria 1962
307 Ga0501264_000995 3300049761 Bacteria 3445
308 Ga0501035_0003585 3300049822 Bacteria 14829
309 nmdc:mga09592_212929_c1 3300050508 Bacteria 1674
310 nmdc:mga0n895_135192_c1 3300050512 Bacteria 2492
311 Ga0495619_0010586 3300053085 Bacteria 5803
312 Ga0495619_0033013 3300053085 Bacteria 3360
313 Ga0500644_0000078 3300053088 Bacteria 59447
314 Ga0500641_0000041 3300053096 Bacteria 67704
315 Ga0500641_0000691 3300053096 Bacteria 12203
316 Ga0500569_000711 3300053109 Bacteria 5786
317 Ga0500577_0000530 3300053142 Bacteria 9855
318 Ga0500616_0000003 3300053153 Bacteria 1220687
319 Ga0500616_0023033 3300053153 Bacteria 3473
320 Ga0500616_0043174 3300053153 Bacteria 2411
321 Ga0500622_0002163 3300053156 Bacteria 14559
322 Ga0500622_0004976 3300053156 Bacteria 8099
323 Ga0500636_0008980 3300053177 Bacteria 5806
324 Ga0500661_001153 3300055283 Bacteria 4942

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009553 Ga0105249_10000240 Ga0105249_1000024040 355
2 3300028800 Ga0265338_10111152 Ga0265338_101111521 364
3 3300036647 Ga0316582_0178718 Ga0316582_0178718_27_1130 366
4 3300053153 Ga0500616_0023033 Ga0500616_0023033_2355_3458 366
5 3300048917 Ga0496114_0125895 Ga0496114_0125895_43_1377 395
6 3300021384 Ga0213876_10004675 Ga0213876_100046758 398
7 3300021388 Ga0213875_10010860 Ga0213875_100108602 398
8 3300044712 Ga0453684_0301540 Ga0453684_0301540_425_1795 399
9 3300053085 Ga0495619_0010586 Ga0495619_0010586_1359_2714 404
10 3300005345 Ga0070692_10003237 Ga0070692_100032374 407
11 3300005617 Ga0068859_100046976 Ga0068859_1000469763 412
12 3300005843 Ga0068860_100001312 Ga0068860_10000131222 412
13 3300005844 Ga0068862_100000481 Ga0068862_10000048120 412
14 3300006931 Ga0097620_100046976 Ga0097620_1000469763 412
15 3300009101 Ga0105247_10013962 Ga0105247_100139623 412
16 3300028380 Ga0268265_10000309 Ga0268265_1000030927 412
17 3300028381 Ga0268264_10001117 Ga0268264_1000111722 412
18 3300025961 Ga0207712_10000196 Ga0207712_1000019627 416
19 3300006173 Ga0070716_100022337 Ga0070716_1000223373 418
20 3300039438 Ga0436360_0326378 Ga0436360_0326378_1175_2476 419
21 3300005340 Ga0070689_100048477 Ga0070689_1000484772 420
22 3300005434 Ga0070709_10103017 Ga0070709_101030172 421
23 3300005435 Ga0070714_100132163 Ga0070714_1001321631 421
24 3300025915 Ga0207693_10005858 Ga0207693_100058583 421
25 3300035724 Ga0373933_0037398 Ga0373933_0037398_1060_2412 421
26 3300046463 Ga0495653_0132054 Ga0495653_0132054_121_1473 421
27 3300046533 Ga0495640_0100187 Ga0495640_0100187_294_1646 421
28 3300046559 Ga0495667_0008348 Ga0495667_0008348_795_2147 421
29 3300046675 Ga0495657_0020209 Ga0495657_0020209_1172_2524 421
30 3300046680 Ga0495646_0008337 Ga0495646_0008337_5071_6423 421
31 3300047317 Ga0495604_0007179 Ga0495604_0007179_1026_2378 421
32 3300047471 Ga0495684_0017294 Ga0495684_0017294_3007_4359 421
33 3300053085 Ga0495619_0033013 Ga0495619_0033013_1214_2566 421
34 3300005330 Ga0070690_100010019 Ga0070690_1000100193 422
35 3300005444 Ga0070694_100017293 Ga0070694_1000172932 422
36 3300005544 Ga0070686_100013974 Ga0070686_1000139743 422
37 3300044842 Ga0466957_0115428 Ga0466957_0115428_347_1621 423
38 3300048915 Ga0496112_0049678 Ga0496112_0049678_1503_2855 423
39 3300048916 Ga0496113_0057818 Ga0496113_0057818_1391_2743 423
40 3300009553 Ga0105249_10041462 Ga0105249_100414624 427
41 3300037471 Ga0395905_0011375 Ga0395905_0011375_2677_4074 428
42 3300037853 Ga0436364_0240449 Ga0436364_0240449_17659_18999 428
43 3300038443 Ga0395901_0170493 Ga0395901_0170493_355_1752 428
44 3300039437 Ga0436365_0641960 Ga0436365_0641960_84_1424 428
45 3300039453 Ga0436362_0705629 Ga0436362_0705629_18_1358 428
46 3300006844 Ga0075428_100020061 Ga0075428_1000200616 429
47 3300031251 Ga0265327_10050101 Ga0265327_100501012 429
48 3300044673 Ga0453683_0000387 Ga0453683_0000387_44241_45578 429
49 3300044712 Ga0453684_0210373 Ga0453684_0210373_392_1729 429
50 3300045051 Ga0451576_0000403 Ga0451576_0000403_92658_93995 429
51 3300009094 Ga0111539_10219382 Ga0111539_102193822 430
52 3300050508 nmdc:mga09592_212929_c1 nmdc:mga09592_212929_c1_151_1617 430
53 3300047673 Ga0495593_0079763 Ga0495593_0079763_270_1622 431
54 3300048911 Ga0496108_0184126 Ga0496108_0184126_324_1676 431
55 3300028800 Ga0265338_10055865 Ga0265338_100558651 432
56 3300003323 rootH1_10040420 rootH1_100404205 433
57 3300026142 Ga0207698_10006709 Ga0207698_100067092 433
58 3300028800 Ga0265338_10001695 Ga0265338_1000169525 433
59 3300031251 Ga0265327_10002725 Ga0265327_100027259 433
60 3300044673 Ga0453683_0045327 Ga0453683_0045327_1046_2383 434
61 3300044712 Ga0453684_0011621 Ga0453684_0011621_6379_7722 434
62 3300031691 Ga0316579_10021242 Ga0316579_100212422 435
63 3300044712 Ga0453684_0097959 Ga0453684_0097959_2242_3585 435
64 3300044712 Ga0453684_0082227 Ga0453684_0082227_1479_2819 436
65 3300039062 Ga0400483_217432 Ga0400483_217432_31367_32704 437
66 3300042876 Ga0451577_0263097 Ga0451577_0263097_82_1419 437
67 3300044712 Ga0453684_0001000 Ga0453684_0001000_46650_47987 437
68 3300044712 Ga0453684_0032677 Ga0453684_0032677_5537_6874 437
69 3300045051 Ga0451576_0112529 Ga0451576_0112529_530_1870 437
70 3300046530 Ga0495654_0088525 Ga0495654_0088525_33_1349 438
71 3300046558 Ga0495633_0000015 Ga0495633_0000015_47438_48754 438
72 3300005365 Ga0070688_100044856 Ga0070688_1000448562 439
73 3300031727 Ga0316576_10032751 Ga0316576_100327513 439
74 3300031727 Ga0316576_10056586 Ga0316576_100565861 439
75 3300031728 Ga0316578_10038977 Ga0316578_100389771 439
76 3300032139 Ga0316580_10033434 Ga0316580_100334341 439
77 3300036712 Ga0316584_0000768 Ga0316584_0000768_10665_12011 439
78 3300036712 Ga0316584_0014741 Ga0316584_0014741_4096_5442 439
79 iso_pu_bacteria 2513020052 2513235847 439
80 iso_pu_bacteria 2643221543 2643738018 439
81 iso_pu_bacteria 2643221667 2644373698 439
82 iso_pu_bacteria 2643221725 2644684101 439
83 iso_pu_bacteria 2738541279 2738734834 439
84 iso_pu_bacteria 2738541285 2738767593 439
85 iso_pu_bacteria 2738543007 2739216416 439
86 iso_pu_bacteria 2821111986 2821114686 439
87 iso_pu_bacteria 2857618242 2857621056 439
88 iso_pu_bacteria 2881247448 2881250650 439
89 iso_pu_bacteria 2885526491 2885527956 439
90 iso_pu_bacteria 2889042446 2889046844 439
91 iso_pu_bacteria 2896085136 2896087371 439
92 iso_pu_bacteria 2896109856 2896114699 439
93 iso_pu_bacteria 2904162308 2904163182 439
94 iso_pu_bacteria 2904490793 2904493750 439
95 iso_pu_bacteria 2907202186 2907205782 439
96 iso_pu_bacteria 2919160200 2919162830 439
97 iso_pu_bacteria 2931384279 2931390292 439
98 iso_pu_bacteria 2945991243 2945997483 439
99 iso_pu_bacteria 2946053406 2946053695 439
100 iso_pu_bacteria 2977268062 2977268752 439
101 3300039438 Ga0436360_1257418 Ga0436360_1257418_11542_12927 440
102 3300039447 Ga0436361_0471349 Ga0436361_0471349_87_1472 440
103 3300039453 Ga0436362_0628733 Ga0436362_0628733_2260_3666 440
104 3300049822 Ga0501035_0003585 Ga0501035_0003585_11282_12604 440
105 iso_pu_bacteria 2965320100 2965322868 440
106 3300031733 Ga0316577_10055339 Ga0316577_100553391 441
107 iso_pu_bacteria 2818991442 2819571968 441
108 iso_pu_bacteria 2818991460 2819677739 441
109 iso_pu_bacteria 2821136567 2821141788 441
110 iso_pu_bacteria 2884791551 2884797687 441
111 iso_pu_bacteria 2904467357 2904469797 441
112 iso_pu_bacteria 2929177148 2929183268 441
113 iso_pu_bacteria 2929239360 2929245387 441
114 iso_pu_bacteria 2945977869 2945979228 441
115 iso_pu_bacteria 2946013367 2946014904 441
116 3300006852 Ga0075433_10007623 Ga0075433_100076233 442
117 3300006871 Ga0075434_100002884 Ga0075434_1000028846 442
118 3300009147 Ga0114129_10035162 Ga0114129_100351625 442
119 3300050512 nmdc:mga0n895_135192_c1 nmdc:mga0n895_135192_c1_448_1803 442
120 iso_pu_bacteria 2738541283 2738756960 442
121 iso_pu_bacteria 2738541284 2738760269 442
122 iso_pu_bacteria 2738543023 2739302391 442
123 iso_pu_bacteria 2775506987 2776612319 442
124 iso_pu_bacteria 2852627209 2852631433 442
125 iso_pu_bacteria 2919186247 2919189541 442
126 iso_pu_bacteria 2939664404 2939667767 442
127 3300003316 rootH1_10009704 rootH1_100097042 443
128 3300003322 rootL2_10006643 rootL2_100066435 443
129 3300003322 rootL2_10067693 rootL2_100676932 443
130 3300003578 Ga0006562J51391_1007085 Ga0006562J51391_10070857 443
131 3300005289 Ga0065704_10073804 Ga0065704_100738044 443
132 3300005337 Ga0070682_100057223 Ga0070682_1000572232 443
133 3300005366 Ga0070659_100013986 Ga0070659_1000139862 443
134 3300009036 Ga0105244_10000508 Ga0105244_100005087 443
135 3300011119 Ga0105246_10005241 Ga0105246_100052415 443
136 3300013102 Ga0157371_10003622 Ga0157371_100036223 443
137 3300013104 Ga0157370_10006335 Ga0157370_100063354 443
138 3300013105 Ga0157369_10002379 Ga0157369_1000237913 443
139 3300013308 Ga0157375_10020008 Ga0157375_100200082 443
140 3300017792 Ga0163161_10000083 Ga0163161_1000008337 443
141 3300025233 Ga0209437_100743 Ga0209437_10074310 443
142 3300025728 Ga0207655_1000045 Ga0207655_1000045167 443
143 3300025932 Ga0207690_10010138 Ga0207690_100101383 443
144 3300031548 Ga0307408_100006688 Ga0307408_1000066887 443
145 3300031852 Ga0307410_10000085 Ga0307410_1000008520 443
146 3300031901 Ga0307406_10000029 Ga0307406_1000002976 443
147 3300032004 Ga0307414_10000005 Ga0307414_10000005219 443
148 3300033180 Ga0307510_10014167 Ga0307510_100141674 443
149 3300036647 Ga0316582_0057336 Ga0316582_0057336_553_1914 443
150 3300045051 Ga0451576_0006434 Ga0451576_0006434_1631_2989 443
151 3300048919 Ga0496116_0000212 Ga0496116_0000212_12916_14247 443
152 3300048927 Ga0496124_0048745 Ga0496124_0048745_1166_2497 443
153 3300048928 Ga0496125_0000062 Ga0496125_0000062_245194_246525 443
154 3300048929 Ga0496126_0021154 Ga0496126_0021154_3706_5037 443
155 3300049679 Ga0501249_000005 Ga0501249_000005_179513_180844 443
156 3300053096 Ga0500641_0000041 Ga0500641_0000041_42072_43403 443
157 3300053096 Ga0500641_0000691 Ga0500641_0000691_4017_5348 443
158 3300003316 rootH1_10000289 rootH1_100002893 444
159 3300003320 rootH2_10002043 rootH2_1000204314 444
160 3300003320 rootH2_10278851 rootH2_102788512 444
161 3300003322 rootL2_10037229 rootL2_100372292 444
162 3300003323 rootH1_10002142 rootH1_100021426 444
163 3300003323 rootH1_10148340 rootH1_101483404 444
164 3300005288 Ga0065714_10081393 Ga0065714_100813932 444
165 3300005614 Ga0068856_100014051 Ga0068856_1000140515 444
166 3300005614 Ga0068856_100033109 Ga0068856_1000331093 444
167 3300006844 Ga0075428_100004617 Ga0075428_1000046175 444
168 3300006846 Ga0075430_100159474 Ga0075430_1001594742 444
169 3300009094 Ga0111539_10002785 Ga0111539_100027855 444
170 3300009545 Ga0105237_10126657 Ga0105237_101266572 444
171 3300013104 Ga0157370_10099474 Ga0157370_100994742 444
172 3300013307 Ga0157372_10001702 Ga0157372_100017024 444
173 3300025298 Ga0209050_1002341 Ga0209050_100234110 444
174 3300026078 Ga0207702_10025059 Ga0207702_100250595 444
175 3300026078 Ga0207702_10081756 Ga0207702_100817561 444
176 3300028794 Ga0307515_10034033 Ga0307515_100340334 444
177 3300031251 Ga0265327_10000935 Ga0265327_1000093512 444
178 3300031456 Ga0307513_10094863 Ga0307513_100948632 444
179 3300037471 Ga0395905_0000001 Ga0395905_0000001_681636_682973 444
180 3300042876 Ga0451577_0009360 Ga0451577_0009360_7985_9319 444
181 3300044673 Ga0453683_0051806 Ga0453683_0051806_907_2241 444
182 3300044712 Ga0453684_0058609 Ga0453684_0058609_1392_2726 444
183 3300046460 Ga0495638_0000005 Ga0495638_0000005_97798_99159 444
184 3300046507 Ga0495606_0034428 Ga0495606_0034428_2122_3468 444
185 3300046512 Ga0495610_0006214 Ga0495610_0006214_2984_4330 444
186 3300049523 Ga0501300_002189 Ga0501300_002189_432_1784 444
187 3300049571 Ga0501034_0022807 Ga0501034_0022807_3892_5226 444
188 3300049670 Ga0501236_000068 Ga0501236_000068_4184_5536 444
189 3300049686 Ga0501257_004628 Ga0501257_004628_454_1806 444
190 3300049686 Ga0501257_012228 Ga0501257_012228_449_1801 444
191 3300049761 Ga0501264_000995 Ga0501264_000995_687_2039 444
192 3300053153 Ga0500616_0000003 Ga0500616_0000003_636085_637446 444
193 3300053153 Ga0500616_0043174 Ga0500616_0043174_933_2288 444
194 3300003316 rootH1_10018147 rootH1_100181472 445
195 3300003320 rootH2_10002710 rootH2_100027103 445
196 3300003322 rootL2_10001878 rootL2_100018784 445
197 3300003322 rootL2_10037559 rootL2_100375596 445
198 3300003323 rootH1_10023770 rootH1_100237701 445
199 3300003323 rootH1_10132388 rootH1_101323882 445
200 3300003323 rootH1_10212425 rootH1_102124253 445
201 3300003761 Ga0055535_1003583 Ga0055535_10035832 445
202 3300003762 Ga0055542_1003004 Ga0055542_10030043 445
203 3300003794 Ga0055531_10000132 Ga0055531_1000013230 445
204 3300005262 Ga0065165_1002613 Ga0065165_10026137 445
205 3300005293 Ga0065715_10104966 Ga0065715_101049662 445
206 3300005353 Ga0070669_100089945 Ga0070669_1000899452 445
207 3300005445 Ga0070708_100190833 Ga0070708_1001908332 445
208 3300005577 Ga0068857_100063372 Ga0068857_1000633722 445
209 3300010375 Ga0105239_10067481 Ga0105239_100674811 445
210 3300013104 Ga0157370_10222405 Ga0157370_102224052 445
211 3300013297 Ga0157378_10113029 Ga0157378_101130291 445
212 3300013307 Ga0157372_10266423 Ga0157372_102664231 445
213 3300015265 Ga0182005_1000209 Ga0182005_10002096 445
214 3300025242 Ga0209258_100075 Ga0209258_100075121 445
215 3300025254 Ga0209148_1000085 Ga0209148_1000085108 445
216 3300025304 Ga0209257_1000004 Ga0209257_10000041126 445
217 3300031727 Ga0316576_10083004 Ga0316576_100830041 445
218 3300031727 Ga0316576_10181101 Ga0316576_101811012 445
219 3300036712 Ga0316584_0000878 Ga0316584_0000878_7084_8421 445
220 3300037471 Ga0395905_0068018 Ga0395905_0068018_391_1731 445
221 3300038443 Ga0395901_0003573 Ga0395901_0003573_4872_6221 445
222 3300039093 Ga0400489_31646 Ga0400489_31646_2317_3657 445
223 3300042876 Ga0451577_0000027 Ga0451577_0000027_119148_120485 445
224 3300042876 Ga0451577_0002562 Ga0451577_0002562_18603_19940 445
225 3300042876 Ga0451577_0012663 Ga0451577_0012663_4218_5555 445
226 3300042876 Ga0451577_0012837 Ga0451577_0012837_953_2290 445
227 3300044673 Ga0453683_0000022 Ga0453683_0000022_254108_255445 445
228 3300044673 Ga0453683_0000146 Ga0453683_0000146_95509_96846 445
229 3300044673 Ga0453683_0012158 Ga0453683_0012158_896_2233 445
230 3300044673 Ga0453683_0054414 Ga0453683_0054414_806_2143 445
231 3300044712 Ga0453684_0000051 Ga0453684_0000051_362184_363521 445
232 3300044712 Ga0453684_0000154 Ga0453684_0000154_27196_28533 445
233 3300044712 Ga0453684_0000213 Ga0453684_0000213_210575_211912 445
234 3300044712 Ga0453684_0000846 Ga0453684_0000846_68383_69720 445
235 3300044712 Ga0453684_0050476 Ga0453684_0050476_3723_5060 445
236 3300044712 Ga0453684_0064687 Ga0453684_0064687_113_1450 445
237 3300045051 Ga0451576_0000032 Ga0451576_0000032_276530_277867 445
238 3300045051 Ga0451576_0000175 Ga0451576_0000175_127134_128471 445
239 3300045051 Ga0451576_0011103 Ga0451576_0011103_5893_7233 445
240 3300045051 Ga0451576_0011426 Ga0451576_0011426_7465_8802 445
241 3300045051 Ga0451576_0013758 Ga0451576_0013758_3136_4473 445
242 3300045051 Ga0451576_0056265 Ga0451576_0056265_2741_4078 445
243 3300045051 Ga0451576_0084463 Ga0451576_0084463_1895_3232 445
244 3300046453 Ga0495627_004906 Ga0495627_004906_3424_4764 445
245 3300046558 Ga0495633_0000022 Ga0495633_0000022_30818_32158 445
246 3300048924 Ga0496121_0000010 Ga0496121_0000010_228342_229682 445
247 3300053088 Ga0500644_0000078 Ga0500644_0000078_53361_54701 445
248 3300053109 Ga0500569_000711 Ga0500569_000711_3774_5114 445
249 3300053142 Ga0500577_0000530 Ga0500577_0000530_7949_9289 445
250 3300053156 Ga0500622_0002163 Ga0500622_0002163_8366_9706 445
251 3300053177 Ga0500636_0008980 Ga0500636_0008980_2621_3961 445
252 3300055283 Ga0500661_001153 Ga0500661_001153_1171_2511 445
253 iso_pu_bacteria 2890804823 2890805170 445
254 3300005288 Ga0065714_10006679 Ga0065714_100066792 446
255 3300005288 Ga0065714_10099919 Ga0065714_100999191 446
256 3300009545 Ga0105237_10001125 Ga0105237_1000112515 446
257 3300013100 Ga0157373_10004594 Ga0157373_100045945 446
258 3300013102 Ga0157371_10016651 Ga0157371_100166512 446
259 3300013104 Ga0157370_10000693 Ga0157370_1000069315 446
260 3300013105 Ga0157369_10192135 Ga0157369_101921352 446
261 3300014497 Ga0182008_10000006 Ga0182008_10000006187 446
262 3300014497 Ga0182008_10003358 Ga0182008_100033583 446
263 3300015261 Ga0182006_1000361 Ga0182006_100036120 446
264 3300015261 Ga0182006_1002059 Ga0182006_10020594 446
265 3300015261 Ga0182006_1003500 Ga0182006_10035002 446
266 3300017792 Ga0163161_10000085 Ga0163161_100000854 446
267 3300017792 Ga0163161_10008376 Ga0163161_100083765 446
268 3300025914 Ga0207671_10001589 Ga0207671_100015898 446
269 3300031251 Ga0265327_10006215 Ga0265327_100062156 446
270 3300031691 Ga0316579_10009643 Ga0316579_100096432 446
271 3300031733 Ga0316577_10036384 Ga0316577_100363842 446
272 3300031911 Ga0307412_10000055 Ga0307412_10000055111 446
273 3300032004 Ga0307414_10001118 Ga0307414_1000111810 446
274 3300036647 Ga0316582_0019485 Ga0316582_0019485_1123_2505 446
275 3300042876 Ga0451577_0013580 Ga0451577_0013580_4418_5758 446
276 3300044673 Ga0453683_0000133 Ga0453683_0000133_9152_10492 446
277 3300044712 Ga0453684_0000133 Ga0453684_0000133_170289_171629 446
278 3300045051 Ga0451576_0000097 Ga0451576_0000097_61330_62670 446
279 3300046501 Ga0495607_0042007 Ga0495607_0042007_603_1946 446
280 3300046522 Ga0495643_0000586 Ga0495643_0000586_16844_18184 446
281 3300048925 Ga0496122_0000404 Ga0496122_0000404_14673_16016 446
282 3300048926 Ga0496123_0002530 Ga0496123_0002530_14524_15867 446
283 3300030745 Ga0316182_1185432 Ga0316182_11854321 447
284 3300031548 Ga0307408_100001461 Ga0307408_1000014618 447
285 3300031548 Ga0307408_100004451 Ga0307408_1000044514 447
286 3300031731 Ga0307405_10060329 Ga0307405_100603292 447
287 3300031911 Ga0307412_10008500 Ga0307412_100085003 447
288 3300042876 Ga0451577_0021525 Ga0451577_0021525_1649_3001 447
289 3300044712 Ga0453684_0000394 Ga0453684_0000394_157383_158735 447
290 3300049581 Ga0501047_0026163 Ga0501047_0026163_528_1871 447
291 3300049663 Ga0501223_000184 Ga0501223_000184_7986_9332 447
292 3300031251 Ga0265327_10038040 Ga0265327_100380402 448
293 3300044712 Ga0453684_0090390 Ga0453684_0090390_58_1407 449
294 3300031251 Ga0265327_10000010 Ga0265327_1000001067 450
295 3300046492 Ga0495585_0004806 Ga0495585_0004806_7258_8634 453
296 3300046524 Ga0495648_0006785 Ga0495648_0006785_5075_6451 453
297 3300046616 Ga0495668_0000041 Ga0495668_0000041_175011_176387 453
298 3300046660 Ga0495625_0001041 Ga0495625_0001041_6544_7920 453
299 3300046683 Ga0495658_0014143 Ga0495658_0014143_230_1606 453
300 iso_pu_bacteria 2599185184 2599479574 453
301 iso_pu_bacteria 2928078545 2928083874 453
302 iso_pu_bacteria 2928147474 2928152315 453
303 iso_pu_bacteria 2585427687 2586209580 454
304 iso_pu_bacteria 2738541302 2738852124 454
305 iso_pu_bacteria 2739367651 2739589700 454
306 iso_pu_bacteria 2739367656 2739616482 454
307 iso_pu_bacteria 2818991437 2819546662 454
308 iso_pu_bacteria 2842722452 2842725357 454
309 iso_pu_bacteria 2842909656 2842912634 454
310 iso_pu_bacteria 2849281842 2849281892 454
311 iso_pu_bacteria 2904445276 2904446800 454
312 iso_pu_bacteria 2945997725 2946002274 454
313 iso_pu_bacteria 2954016120 2954019173 454
314 iso_pu_bacteria 2739367663 2739647129 455
315 iso_pu_bacteria 2902048731 2902052349 455
316 iso_pu_bacteria 2977232053 2977233836 455
317 3300001989 JGI24739J22299_10024049 JGI24739J22299_100240492 457
318 3300005563 Ga0068855_100147909 Ga0068855_1001479092 457
319 3300006195 Ga0075366_10031870 Ga0075366_100318702 457
320 3300013102 Ga0157371_10009098 Ga0157371_100090984 457
321 3300025949 Ga0207667_10122781 Ga0207667_101227812 457
322 3300046507 Ga0495606_0004518 Ga0495606_0004518_12311_13687 457
323 3300002067 JGI24735J21928_10000003 JGI24735J21928_10000003199 458
324 3300002774 JGI25150J39212_1000001 JGI25150J39212_1000001189 458
325 3300003187 JGI25151J46595_10000001 JGI25151J46595_10000001610 458
326 3300003215 JGI25153J46596_10000001 JGI25153J46596_10000001499 458
327 3300003316 rootH1_10021265 rootH1_100212652 458
328 3300003323 rootH1_10022063 rootH1_100220632 458
329 3300005288 Ga0065714_10065033 Ga0065714_100650337 458
330 3300005339 Ga0070660_100029394 Ga0070660_1000293942 458
331 3300009551 Ga0105238_10238034 Ga0105238_102380342 458
332 3300013102 Ga0157371_10000922 Ga0157371_100009222 458
333 3300013104 Ga0157370_10094941 Ga0157370_100949412 458
334 3300013105 Ga0157369_10244444 Ga0157369_102444442 458
335 3300013297 Ga0157378_10041394 Ga0157378_100413942 458
336 3300013306 Ga0163162_10000558 Ga0163162_100005586 458
337 3300013307 Ga0157372_10003174 Ga0157372_100031748 458
338 3300014497 Ga0182008_10000769 Ga0182008_100007694 458
339 3300015261 Ga0182006_1000878 Ga0182006_100087816 458
340 3300015261 Ga0182006_1002552 Ga0182006_10025527 458
341 3300015262 Ga0182007_10000033 Ga0182007_1000003317 458
342 3300015682 Ga0183373_1001 Ga0183373_1001363 458
343 3300017792 Ga0163161_10003986 Ga0163161_100039863 458
344 3300025245 Ga0207425_1000002 Ga0207425_1000002974 458
345 3300025258 Ga0209129_1000002 Ga0209129_1000002974 458
346 3300025292 Ga0209676_1000008 Ga0209676_1000008267 458
347 3300025294 Ga0209025_1000004 Ga0209025_1000004216 458
348 3300025297 Ga0209758_1000006 Ga0209758_1000006216 458
349 3300025298 Ga0209050_1000055 Ga0209050_1000055145 458
350 3300025919 Ga0207657_10039909 Ga0207657_100399092 458
351 3300025932 Ga0207690_10000519 Ga0207690_100005193 458
352 3300028794 Ga0307515_10016961 Ga0307515_100169615 458
353 3300028794 Ga0307515_10031774 Ga0307515_100317741 458
354 3300031731 Ga0307405_10000003 Ga0307405_10000003395 458
355 3300031903 Ga0307407_10000010 Ga0307407_1000001020 458
356 3300032002 Ga0307416_100000014 Ga0307416_100000014211 458
357 3300033179 Ga0307507_10000883 Ga0307507_1000088313 458
358 3300046471 Ga0495650_0000107 Ga0495650_0000107_37468_38862 458
359 3300046492 Ga0495585_0000014 Ga0495585_0000014_106307_107725 458
360 3300046506 Ga0495583_0060055 Ga0495583_0060055_251_1654 458
361 3300046507 Ga0495606_0000192 Ga0495606_0000192_26772_28166 458
362 3300046512 Ga0495610_0000051 Ga0495610_0000051_109834_111222 458
363 3300046512 Ga0495610_0006245 Ga0495610_0006245_1890_3284 458
364 3300046513 Ga0495616_0000777 Ga0495616_0000777_18223_19617 458
365 3300046660 Ga0495625_0000021 Ga0495625_0000021_187956_189350 458
366 3300046665 Ga0495661_0026645 Ga0495661_0026645_414_1808 458
367 3300046694 Ga0495649_0000009 Ga0495649_0000009_270176_271570 458
368 3300047443 Ga0495687_003536 Ga0495687_003536_2145_3563 458
369 3300047472 Ga0495686_0007909 Ga0495686_0007909_4523_5917 458
370 3300053156 Ga0500622_0004976 Ga0500622_0004976_2544_3929 458
371 iso_pu_bacteria 2932082852 2932084879 458
372 3300001904 JGI24736J21556_1002029 JGI24736J21556_10020292 459
373 3300005366 Ga0070659_100004393 Ga0070659_1000043936 459
374 3300005577 Ga0068857_100008626 Ga0068857_1000086262 459
375 3300006195 Ga0075366_10022016 Ga0075366_100220163 459
376 3300013100 Ga0157373_10003119 Ga0157373_100031193 459
377 3300013307 Ga0157372_10165617 Ga0157372_101656172 459
378 3300025904 Ga0207647_10000035 Ga0207647_1000003573 459
379 3300031548 Ga0307408_100014380 Ga0307408_1000143802 459
380 3300038443 Ga0395901_0195817 Ga0395901_0195817_504_1892 459
381 3300046507 Ga0495606_0049242 Ga0495606_0049242_226_1629 459
382 3300046660 Ga0495625_0002514 Ga0495625_0002514_12040_13446 459

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

372

485

0.92

PF21799

MurD-like_N

Mur ligase MurD-like, N-terminal domain

65

154

0.9

PF21377

MurD_N

MurD N-terminal domain

66

140

0.86

PF08245

Mur_ligase_M

Mur ligase middle domain

170

350

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j33-assembly2.cif.gz_B crystal structure of kynurenine 3-monooxygenase (kmo-394) 0.9588 17 48
4j36-assembly1.cif.gz_A cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9566 17 48
4j34-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. 0.9551 17 48
8gsm-assembly1.cif.gz_G crystal structure of vibmo1 0.9499 16 46
6ici-assembly1.cif.gz_A crystal structure of human mical3 0.9485 17 48
ID Description Score Start End Superfamily
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9532 17 48 3.50.50.60
af_Q54GT1_13_197_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9531 17 48 3.50.50.60
5ttkA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9508 18 47 3.50.50.60
af_Q2FZ92_312_442_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9493 325 455 3.90.190.20
af_O15229_1_369_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9358 16 49 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A7Y2A6M6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 1.001 324 459 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A2R7K1K9-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 1 18 111 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0051301
AF-A0A522F1X1-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9937 17 111 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0051301
AF-A0A7Y2A6M6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9936 324 459 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-K1V7Q5-F1-model_v4 UDP-N-acetylmuramoylalanine--D-glutamate ligase 0.9906 22 103 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0051301

Feature Viewer

pLDDT pTM Quality
91.78 0.84 High
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Predicted Structure (AlphaFold2)

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