F429294

General Info

Members Datasets Scaffolds Average Seq Length
382 177 765 280

Family's Representative Sequence

Representative Sequence 3300026089|Ga0207648_10162723|Ga0207648_101627232
Length 305
Sequence MTTPARNSPRRGAGVSPRARARASCGYRLPAASGSGVVFRRADLNVDIPARYDLVSETRLGTVIGQGSAKVGVVEHLMAAAAGAEIDDLLVSLDGPEPPILDGDALSYLTLMESAGLREQDQPRTAIRVRKTVTVESGDAKASLLPDESLSYSYELSFPVIGEQVFAFAFSRAGFKAEIAPARTFGFLSELEALNKMDMAKGASLANTLALDDTGVINRDRQRFADEFVRHKILDAVGDLALVGYPVIGHLVAHRAGHALHTEFAAKILEETHAWRFVEAPSEGAPFVATVPVEAVKSIKGAAAI

Samples

Sample ID Description Type Environment
1 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
109 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
110 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
111 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
112 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
113 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
114 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
115 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
116 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
117 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
118 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
119 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
120 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
121 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
122 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
133 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
134 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
161 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
169 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
170 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
171 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
174 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
175 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.4
Nodule 0
Rhizoplane 0
Rhizosphere 94.24
Stem 0
Stem Tuber 0
Unclassified 1.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207648_10162723 3300026089 Bacteria 1971
2 JGI25165J46597_1000008 3300003214 Bacteria 478603
3 rootH2_10088119 3300003320 Bacteria 3311
4 rootH1_10110367 3300003316 Bacteria 2144
5 rootH1_10110367 3300003323 Bacteria 1489
6 Ga0070658_10008047 3300005327 Bacteria 8476
7 Ga0070658_10025301 3300005327 Bacteria 4759
8 Ga0070676_10004406 3300005328 Bacteria 7405
9 Ga0070683_100044426 3300005329 Bacteria 4097
10 Ga0070683_100275806 3300005329 Bacteria 1600
11 Ga0070690_100420859 3300005330 Bacteria 985
12 Ga0070670_100050765 3300005331 Bacteria 3564
13 Ga0068869_100002159 3300005334 Bacteria 11828
14 Ga0068869_100238532 3300005334 Bacteria 1448
15 Ga0070666_10108668 3300005335 Bacteria 1916
16 Ga0070680_100000033 3300005336 Bacteria 70320
17 Ga0068868_100122647 3300005338 Bacteria 2121
18 Ga0068868_100161988 3300005338 Bacteria 1848
19 Ga0070661_100091455 3300005344 Bacteria 2254
20 Ga0070661_100215478 3300005344 Bacteria 1471
21 Ga0070668_100188286 3300005347 Bacteria 1689
22 Ga0070675_100022161 3300005354 Bacteria 5075
23 Ga0070671_100413393 3300005355 Bacteria 1155
24 Ga0070674_100302260 3300005356 Bacteria 1276
25 Ga0070673_100010388 3300005364 Bacteria 6303
26 Ga0070659_100021599 3300005366 Bacteria 4905
27 Ga0070667_100190997 3300005367 Bacteria 1814
28 Ga0070667_100193793 3300005367 Bacteria 1801
29 Ga0070713_100037320 3300005436 Bacteria 3928
30 Ga0070713_100253780 3300005436 Bacteria 1605
31 Ga0070701_10073829 3300005438 Unclassified 1830
32 Ga0070711_100385176 3300005439 Bacteria 1135
33 Ga0070678_100005692 3300005456 Bacteria 7239
34 Ga0070678_100010287 3300005456 Bacteria 5707
35 Ga0070678_100139316 3300005456 Bacteria 1939
36 Ga0070678_100264479 3300005456 Bacteria 1448
37 Ga0070681_10000002 3300005458 Bacteria 821814
38 Ga0068867_100015716 3300005459 Bacteria 5371
39 Ga0068867_100026931 3300005459 Bacteria 4131
40 Ga0070685_10297176 3300005466 Bacteria 1087
41 Ga0070679_100006750 3300005530 Bacteria 10702
42 Ga0070679_100013458 3300005530 Bacteria 7834
43 Ga0070679_100184840 3300005530 Bacteria 2056
44 Ga0070684_100074287 3300005535 Bacteria 2997
45 Ga0070684_100094448 3300005535 Bacteria 2663
46 Ga0068853_100001702 3300005539 Bacteria 16115
47 Ga0068853_100167499 3300005539 Bacteria 1986
48 Ga0070693_100406692 3300005547 Unclassified 945
49 Ga0070665_100002023 3300005548 Bacteria 22800
50 Ga0070665_100010678 3300005548 Bacteria 9296
51 Ga0070665_100037337 3300005548 Bacteria 4886
52 Ga0070665_100040857 3300005548 Bacteria 4661
53 Ga0070665_100068283 3300005548 Bacteria 3564
54 Ga0068855_100001071 3300005563 Bacteria 33976
55 Ga0068855_100023621 3300005563 Bacteria 7364
56 Ga0070664_100355592 3300005564 Bacteria 1333
57 Ga0068857_100105010 3300005577 Bacteria 2536
58 Ga0068856_100092831 3300005614 Bacteria 3004
59 Ga0068856_100207368 3300005614 Bacteria 1974
60 Ga0068856_100219000 3300005614 Bacteria 1919
61 Ga0068856_100264990 3300005614 Bacteria 1734
62 Ga0070702_100291304 3300005615 Bacteria 1125
63 Ga0068852_100013044 3300005616 Bacteria 6343
64 Ga0068852_100055035 3300005616 Bacteria 3432
65 Ga0068852_100076093 3300005616 Bacteria 2963
66 Ga0068866_10011354 3300005718 Bacteria 3851
67 Ga0068861_100325369 3300005719 Bacteria 1340
68 Ga0068863_100135100 3300005841 Bacteria 2356
69 Ga0068863_100398530 3300005841 Bacteria 1346
70 Ga0068858_100065158 3300005842 Bacteria 3371
71 Ga0068858_100352537 3300005842 Bacteria 1410
72 Ga0068858_100375816 3300005842 Bacteria 1363
73 Ga0068860_100032103 3300005843 Bacteria 5048
74 Ga0097621_100000737 3300006237 Bacteria 22940
75 Ga0097621_100012886 3300006237 Bacteria 6213
76 Ga0097621_100013055 3300006237 Bacteria 6177
77 Ga0097621_100271791 3300006237 Bacteria 1489
78 Ga0097621_100279279 3300006237 Bacteria 1470
79 Ga0097621_100384892 3300006237 Bacteria 1253
80 Ga0068871_100000187 3300006358 Bacteria 42079
81 Ga0068871_100018932 3300006358 Bacteria 5247
82 Ga0068871_100130330 3300006358 Bacteria 2132
83 Ga0068871_100216849 3300006358 Bacteria 1657
84 Ga0068865_100025365 3300006881 Bacteria 3899
85 Ga0068865_100050223 3300006881 Bacteria 2880
86 Ga0105240_10000582 3300009093 Bacteria 67645
87 Ga0105240_10028830 3300009093 Bacteria 7241
88 Ga0105240_10030372 3300009093 Bacteria 7023
89 Ga0105240_10033409 3300009093 Bacteria 6645
90 Ga0105240_10037533 3300009093 Bacteria 6226
91 Ga0105240_10090973 3300009093 Bacteria 3729
92 Ga0105240_10108275 3300009093 Bacteria 3367
93 Ga0105240_10246661 3300009093 Bacteria 2068
94 Ga0105240_10292491 3300009093 Bacteria 1867
95 Ga0105240_10433136 3300009093 Bacteria 1475
96 Ga0105240_10516843 3300009093 Bacteria 1326
97 Ga0105240_10769557 3300009093 Bacteria 1045
98 Ga0105245_10031611 3300009098 Bacteria 4685
99 Ga0105245_10201951 3300009098 Bacteria 1909
100 Ga0105247_10026137 3300009101 Bacteria 3524
101 Ga0105247_10101679 3300009101 Bacteria 1838
102 Ga0105243_10019488 3300009148 Bacteria 5144
103 Ga0105241_10013063 3300009174 Bacteria 6089
104 Ga0105241_10034630 3300009174 Bacteria 3795
105 Ga0105241_10241401 3300009174 Bacteria 1527
106 Ga0105241_10279480 3300009174 Bacteria 1425
107 Ga0105241_10342632 3300009174 Bacteria 1295
108 Ga0105242_10019885 3300009176 Bacteria 5260
109 Ga0105242_10228094 3300009176 Bacteria 1668
110 Ga0105242_10310178 3300009176 Bacteria 1443
111 Ga0105248_10000015 3300009177 Bacteria 322959
112 Ga0105248_10016413 3300009177 Bacteria 8149
113 Ga0105248_10443231 3300009177 Bacteria 1463
114 Ga0105237_10031481 3300009545 Bacteria 5378
115 Ga0105237_10094890 3300009545 Bacteria 2972
116 Ga0105237_10111712 3300009545 Bacteria 2725
117 Ga0105237_10143132 3300009545 Bacteria 2385
118 Ga0105237_10147673 3300009545 Bacteria 2346
119 Ga0105237_10199260 3300009545 Bacteria 2001
120 Ga0105237_10333254 3300009545 Bacteria 1522
121 Ga0105238_10003071 3300009551 Bacteria 16643
122 Ga0105238_10061201 3300009551 Bacteria 3768
123 Ga0105238_10080470 3300009551 Bacteria 3247
124 Ga0105238_10095864 3300009551 Bacteria 2953
125 Ga0105238_10122358 3300009551 Bacteria 2581
126 Ga0105238_10130803 3300009551 Bacteria 2488
127 Ga0105238_10200322 3300009551 Bacteria 1972
128 Ga0105249_10396307 3300009553 Bacteria 1410
129 Ga0105239_10003777 3300010375 Bacteria 18426
130 Ga0105239_10012621 3300010375 Bacteria 9401
131 Ga0105239_10071175 3300010375 Bacteria 3821
132 Ga0105239_10091860 3300010375 Bacteria 3350
133 Ga0105239_10132393 3300010375 Bacteria 2774
134 Ga0105239_10157325 3300010375 Bacteria 2538
135 Ga0105239_10221220 3300010375 Bacteria 2123
136 Ga0105239_10224086 3300010375 Bacteria 2109
137 Ga0105239_10295546 3300010375 Bacteria 1824
138 Ga0105246_10007357 3300011119 Bacteria 6747
139 Ga0105246_10059563 3300011119 Bacteria 2649
140 Ga0157370_10127654 3300013104 Bacteria 2374
141 Ga0157369_10018057 3300013105 Bacteria 7913
142 Ga0157369_10097422 3300013105 Bacteria 3138
143 Ga0157374_10047467 3300013296 Bacteria 3982
144 Ga0157378_10047987 3300013297 Bacteria 3797
145 Ga0157378_10109099 3300013297 Bacteria 2535
146 Ga0157378_10192259 3300013297 Bacteria 1926
147 Ga0163162_10044843 3300013306 Bacteria 4429
148 Ga0163162_10048577 3300013306 Bacteria 4252
149 Ga0163162_10228604 3300013306 Bacteria 1990
150 Ga0157372_10028781 3300013307 Bacteria 6064
151 Ga0157372_10033495 3300013307 Bacteria 5644
152 Ga0157372_10046024 3300013307 Bacteria 4842
153 Ga0157372_10526953 3300013307 Bacteria 1377
154 Ga0157375_10236699 3300013308 Bacteria 1985
155 Ga0163163_10000150 3300014325 Bacteria 72638
156 Ga0157379_10040069 3300014968 Bacteria 4180
157 Ga0157379_10062677 3300014968 Bacteria 3325
158 Ga0157379_10078670 3300014968 Bacteria 2953
159 Ga0157379_10476839 3300014968 Unclassified 1154
160 Ga0163161_10032941 3300017792 Bacteria 3702
161 Ga0213876_10000435 3300021384 Bacteria 34197
162 Ga0207427_106196 3300025231 Bacteria 1551
163 Ga0209233_1000006 3300025261 Bacteria 1473685
164 Ga0207642_10003606 3300025899 Bacteria 4911
165 Ga0207645_10004703 3300025907 Bacteria 10043
166 Ga0207705_10030473 3300025909 Bacteria 3850
167 Ga0207654_10115883 3300025911 Bacteria 1674
168 Ga0207707_10000002 3300025912 Bacteria 1142054
169 Ga0207707_10090620 3300025912 Bacteria 2672
170 Ga0207695_10000004 3300025913 Bacteria 1288665
171 Ga0207695_10022461 3300025913 Bacteria 7159
172 Ga0207695_10025910 3300025913 Bacteria 6554
173 Ga0207695_10030633 3300025913 Bacteria 5920
174 Ga0207695_10034716 3300025913 Bacteria 5480
175 Ga0207695_10040156 3300025913 Bacteria 5021
176 Ga0207695_10174482 3300025913 Bacteria 2073
177 Ga0207695_10251737 3300025913 Bacteria 1665
178 Ga0207695_10334829 3300025913 Bacteria 1402
179 Ga0207695_10359036 3300025913 Bacteria 1343
180 Ga0207671_10008697 3300025914 Bacteria 8569
181 Ga0207671_10038509 3300025914 Bacteria 3543
182 Ga0207671_10117362 3300025914 Bacteria 2031
183 Ga0207671_10148489 3300025914 Bacteria 1810
184 Ga0207663_10298075 3300025916 Bacteria 1203
185 Ga0207660_10000010 3300025917 Bacteria 92859
186 Ga0207660_10138962 3300025917 Bacteria 1856
187 Ga0207657_10040722 3300025919 Bacteria 4114
188 Ga0207649_10077018 3300025920 Bacteria 2148
189 Ga0207649_10412422 3300025920 Bacteria 1013
190 Ga0207652_10000053 3300025921 Bacteria 118700
191 Ga0207694_10000015 3300025924 Bacteria 363898
192 Ga0207694_10032966 3300025924 Bacteria 3967
193 Ga0207694_10074540 3300025924 Bacteria 2656
194 Ga0207694_10375023 3300025924 Bacteria 1180
195 Ga0207650_10070752 3300025925 Bacteria 2623
196 Ga0207650_10240925 3300025925 Bacteria 1462
197 Ga0207700_10329012 3300025928 Unclassified 1326
198 Ga0207644_10388507 3300025931 Bacteria 1139
199 Ga0207686_10010432 3300025934 Bacteria 5059
200 Ga0207686_10036147 3300025934 Bacteria 2971
201 Ga0207709_10015963 3300025935 Bacteria 4168
202 Ga0207691_10102185 3300025940 Bacteria 2557
203 Ga0207711_10000003 3300025941 Bacteria 1042791
204 Ga0207711_10000005 3300025941 Bacteria 822972
205 Ga0207711_10000009 3300025941 Bacteria 580864
206 Ga0207711_10014425 3300025941 Bacteria 6563
207 Ga0207689_10002312 3300025942 Bacteria 17850
208 Ga0207661_10264118 3300025944 Bacteria 1534
209 Ga0207661_10466628 3300025944 Bacteria 1151
210 Ga0207679_10200942 3300025945 Bacteria 1665
211 Ga0207667_10000226 3300025949 Bacteria 79075
212 Ga0207667_10005475 3300025949 Bacteria 15477
213 Ga0207667_10049691 3300025949 Bacteria 4428
214 Ga0207667_10139410 3300025949 Bacteria 2497
215 Ga0207667_10278987 3300025949 Bacteria 1708
216 Ga0207651_10025638 3300025960 Bacteria 3668
217 Ga0207640_10464569 3300025981 Bacteria 1046
218 Ga0207658_10166727 3300025986 Bacteria 1810
219 Ga0207677_10066340 3300026023 Bacteria 2523
220 Ga0207677_10136234 3300026023 Bacteria 1872
221 Ga0207639_10017282 3300026041 Bacteria 5113
222 Ga0207639_10036092 3300026041 Bacteria 3661
223 Ga0207639_10133335 3300026041 Bacteria 2059
224 Ga0207639_10197552 3300026041 Bacteria 1723
225 Ga0207708_10205108 3300026075 Bacteria 1574
226 Ga0207702_10026888 3300026078 Bacteria 4778
227 Ga0207702_10146365 3300026078 Bacteria 2144
228 Ga0207702_10166024 3300026078 Bacteria 2020
229 Ga0207641_10042277 3300026088 Bacteria 3823
230 Ga0207648_10013145 3300026089 Bacteria 7714
231 Ga0207648_10023567 3300026089 Bacteria 5511
232 Ga0207683_10004408 3300026121 Bacteria 12173
233 Ga0207683_10014416 3300026121 Bacteria 6730
234 Ga0207683_10143655 3300026121 Bacteria 2151
235 Ga0207683_10273047 3300026121 Bacteria 1545
236 Ga0207698_10002329 3300026142 Bacteria 11247
237 Ga0207698_10057909 3300026142 Bacteria 3000
238 Ga0207698_10404182 3300026142 Bacteria 1306
239 Ga0207698_10449780 3300026142 Bacteria 1243
240 Ga0268266_10001115 3300028379 Bacteria 33566
241 Ga0268266_10011187 3300028379 Bacteria 7810
242 Ga0268266_10032268 3300028379 Bacteria 4450
243 Ga0268266_10037131 3300028379 Bacteria 4150
244 Ga0268266_10124584 3300028379 Bacteria 2297
245 Ga0268266_10241186 3300028379 Bacteria 1668
246 Ga0268266_10596814 3300028379 Bacteria 1060
247 Ga0265337_1047098 3300028556 Bacteria 1223
248 Ga0265334_10012835 3300028573 Bacteria 3513
249 Ga0265318_10000025 3300028577 Bacteria 159237
250 Ga0265338_10000007 3300028800 Bacteria 498229
251 Ga0265338_10008470 3300028800 Bacteria 12483
252 Ga0265325_10000001 3300031241 Bacteria 726814
253 Ga0265325_10000845 3300031241 Bacteria 22173
254 Ga0265325_10045768 3300031241 Bacteria 2272
255 Ga0265325_10065121 3300031241 Bacteria 1841
256 Ga0265340_10000052 3300031247 Bacteria 54270
257 Ga0265340_10002920 3300031247 Bacteria 9733
258 Ga0265340_10020307 3300031247 Bacteria 3415
259 Ga0265340_10021165 3300031247 Bacteria 3336
260 Ga0265339_10000291 3300031249 Bacteria 40638
261 Ga0265339_10006911 3300031249 Bacteria 7393
262 Ga0265339_10008997 3300031249 Bacteria 6313
263 Ga0265339_10124720 3300031249 Bacteria 1321
264 Ga0265331_10003521 3300031250 Bacteria 10075
265 Ga0265331_10014217 3300031250 Bacteria 4248
266 Ga0265316_10000747 3300031344 Bacteria 35907
267 Ga0265316_10016835 3300031344 Bacteria 6327
268 Ga0265316_10046266 3300031344 Bacteria 3449
269 Ga0265316_10196251 3300031344 Bacteria 1498
270 Ga0265313_10000650 3300031595 Bacteria 35724
271 Ga0265313_10018301 3300031595 Bacteria 3939
272 Ga0265313_10054967 3300031595 Bacteria 1888
273 Ga0265314_10002173 3300031711 Bacteria 20530
274 Ga0265314_10030588 3300031711 Bacteria 3982
275 Ga0265314_10037404 3300031711 Bacteria 3517
276 Ga0265314_10132433 3300031711 Bacteria 1553
277 Ga0265314_10170435 3300031711 Bacteria 1315
278 Ga0265314_10181503 3300031711 Bacteria 1261
279 Ga0265342_10003120 3300031712 Bacteria 13848
280 Ga0265342_10004748 3300031712 Bacteria 10567
281 Ga0265342_10013088 3300031712 Bacteria 5583
282 Ga0265342_10016018 3300031712 Bacteria 4911
283 Ga0265342_10018378 3300031712 Bacteria 4531
284 Ga0307516_10033213 3300031730 Bacteria 5192
285 Ga0307516_10059709 3300031730 Bacteria 3708
286 Ga0307516_10223419 3300031730 Bacteria 1591
287 Ga0373939_0022612 3300035114 Bacteria 1734
288 Ga0373927_0053936 3300035695 Bacteria 2601
289 Ga0395900_0144139 3300037418 Bacteria 2437
290 Ga0395898_0147305 3300037466 Bacteria 2253
291 Ga0395901_0019435 3300038443 Bacteria 6947
292 Ga0395901_0513408 3300038443 Bacteria 1218
293 Ga0436365_0729755 3300039437 Bacteria 2214
294 Ga0436365_1797404 3300039437 Bacteria 129057
295 Ga0495638_0150002 3300046460 Bacteria 1353
296 Ga0495618_0110541 3300046514 Bacteria 1760
297 Ga0495628_0270573 3300046516 Unclassified 1264
298 Ga0495652_0091118 3300046529 Bacteria 2493
299 Ga0495587_0049397 3300046536 Bacteria 2490
300 Ga0495587_0192359 3300046536 Bacteria 1155
301 Ga0495621_0025869 3300046539 Bacteria 1975
302 Ga0495622_0065949 3300046557 Bacteria 1673
303 Ga0495611_0099569 3300046648 Bacteria 1349
304 Ga0495674_0087232 3300047319 Bacteria 2671
305 Ga0495672_0162222 3300047320 Bacteria 1148
306 Ga0495675_0055359 3300047444 Bacteria 2516
307 Ga0495602_0158598 3300048088 Bacteria 1769
308 Ga0496121_0000701 3300048924 Bacteria 62310
309 Ga0495682_0004311 3300049460 Bacteria 6124
310 Ga0501031_0015928 3300049568 Bacteria 4881
311 Ga0501032_0003843 3300049569 Bacteria 11409
312 Ga0501032_0455114 3300049569 Bacteria 820
313 Ga0501033_0016002 3300049570 Bacteria 5682
314 Ga0501033_0059734 3300049570 Bacteria 2815
315 Ga0501034_0019668 3300049571 Bacteria 6903
316 Ga0501034_0185787 3300049571 Bacteria 2042
317 Ga0501034_0233498 3300049571 Bacteria 1787
318 Ga0501034_0396562 3300049571 Bacteria 1303
319 Ga0501036_0003198 3300049572 Bacteria 13078
320 Ga0501036_0058366 3300049572 Bacteria 3269
321 Ga0501037_0022891 3300049573 Bacteria 4621
322 Ga0501037_0067462 3300049573 Bacteria 2605
323 Ga0501038_0107701 3300049574 Bacteria 2312
324 Ga0501038_0180998 3300049574 Bacteria 1700
325 Ga0501039_0028021 3300049575 Bacteria 4333
326 Ga0501042_0041795 3300049578 Bacteria 3261
327 Ga0501043_0045683 3300049579 Bacteria 3444
328 Ga0501043_0134091 3300049579 Bacteria 1940
329 Ga0501046_0027000 3300049580 Bacteria 4687
330 Ga0501046_0073720 3300049580 Bacteria 2649
331 Ga0501047_0015315 3300049581 Bacteria 7304
332 Ga0501047_0097642 3300049581 Bacteria 2816
333 Ga0501047_0197316 3300049581 Bacteria 1874
334 Ga0501047_0333223 3300049581 Bacteria 1356
335 Ga0501047_0348753 3300049581 Bacteria 1317
336 Ga0501047_0363226 3300049581 Unclassified 1283
337 Ga0501047_0457356 3300049581 Bacteria 1105
338 Ga0501047_0461340 3300049581 Bacteria 1099
339 Ga0501048_0002407 3300049582 Bacteria 14278
340 Ga0501067_0002203 3300049583 Bacteria 10766
341 Ga0501068_0001838 3300049584 Bacteria 11268
342 Ga0501069_0004160 3300049585 Bacteria 7474
343 Ga0501070_0239919 3300049586 Bacteria 1484
344 Ga0501072_0011201 3300049588 Bacteria 6845
345 Ga0501073_0020912 3300049589 Bacteria 4719
346 Ga0501073_0104205 3300049589 Bacteria 1969
347 Ga0501073_0252601 3300049589 Bacteria 1217
348 Ga0501074_0002366 3300049590 Bacteria 13131
349 Ga0501074_0243976 3300049590 Bacteria 1278
350 Ga0501076_0191102 3300049592 Bacteria 1671
351 Ga0501079_0005905 3300049741 Bacteria 9169
352 Ga0501080_0009274 3300049742 Bacteria 8972
353 Ga0501080_0022596 3300049742 Bacteria 5826
354 Ga0501080_0220720 3300049742 Bacteria 1735
355 Ga0501080_0349102 3300049742 Bacteria 1336
356 Ga0501080_0442386 3300049742 Bacteria 1166
357 Ga0501083_0000426 3300049744 Bacteria 27116
358 Ga0501083_0010796 3300049744 Bacteria 6424
359 Ga0501083_0185062 3300049744 Bacteria 1360
360 Ga0501035_0004610 3300049822 Bacteria 13074
361 Ga0501035_0012193 3300049822 Bacteria 7948
362 Ga0501035_0180876 3300049822 Bacteria 1816
363 Ga0501044_0002266 3300049823 Bacteria 21944
364 Ga0501044_0010089 3300049823 Bacteria 10264
365 Ga0501044_0021972 3300049823 Bacteria 6803
366 Ga0501044_0025168 3300049823 Bacteria 6311
367 Ga0501044_0029604 3300049823 Bacteria 5772
368 Ga0501044_0029749 3300049823 Bacteria 5758
369 Ga0501045_0059980 3300049824 Bacteria 2788
370 Ga0500643_000008 3300053087 Bacteria 457931
371 Ga0500555_042155 3300053103 Bacteria 1268
372 Ga0500595_000827 3300053119 Bacteria 17705
373 Ga0500595_014085 3300053119 Bacteria 3044
374 Ga0500595_031932 3300053119 Bacteria 1763
375 Ga0500655_009427 3300053133 Bacteria 1760
376 Ga0500568_0014796 3300053139 Bacteria 3511
377 Ga0500573_0000062 3300053140 Bacteria 67407
378 Ga0500619_033172 3300053154 Bacteria 1587
379 Ga0500645_016424 3300053730 Bacteria 2330
380 Ga0501084_0000074 3300054114 Bacteria 72522
381 Ga0501084_0004763 3300054114 Bacteria 11091
382 Ga0501082_0007756 3300060353 Bacteria 9265
383 Ga0501082_0034679 3300060353 Bacteria 4350
384 Ga0207648_10162723
385 JGI25165J46597_1000008
386 rootH2_10088119
387 rootH1_10110367
388 Ga0070658_10008047
389 Ga0070658_10025301
390 Ga0070676_10004406
391 Ga0070683_100044426
392 Ga0070683_100275806
393 Ga0070690_100420859
394 Ga0070670_100050765
395 Ga0068869_100002159
396 Ga0068869_100238532
397 Ga0070666_10108668
398 Ga0070680_100000033
399 Ga0068868_100122647
400 Ga0068868_100161988
401 Ga0070661_100091455
402 Ga0070661_100215478
403 Ga0070668_100188286
404 Ga0070675_100022161
405 Ga0070671_100413393
406 Ga0070674_100302260
407 Ga0070673_100010388
408 Ga0070659_100021599
409 Ga0070667_100190997
410 Ga0070667_100193793
411 Ga0070713_100037320
412 Ga0070713_100253780
413 Ga0070701_10073829
414 Ga0070711_100385176
415 Ga0070678_100005692
416 Ga0070678_100010287
417 Ga0070678_100139316
418 Ga0070678_100264479
419 Ga0070681_10000002
420 Ga0068867_100015716
421 Ga0068867_100026931
422 Ga0070685_10297176
423 Ga0070679_100006750
424 Ga0070679_100013458
425 Ga0070679_100184840
426 Ga0070684_100074287
427 Ga0070684_100094448
428 Ga0068853_100001702
429 Ga0068853_100167499
430 Ga0070693_100406692
431 Ga0070665_100002023
432 Ga0070665_100010678
433 Ga0070665_100037337
434 Ga0070665_100040857
435 Ga0070665_100068283
436 Ga0068855_100001071
437 Ga0068855_100023621
438 Ga0070664_100355592
439 Ga0068857_100105010
440 Ga0068856_100092831
441 Ga0068856_100207368
442 Ga0068856_100219000
443 Ga0068856_100264990
444 Ga0070702_100291304
445 Ga0068852_100013044
446 Ga0068852_100055035
447 Ga0068852_100076093
448 Ga0068866_10011354
449 Ga0068861_100325369
450 Ga0068863_100135100
451 Ga0068863_100398530
452 Ga0068858_100065158
453 Ga0068858_100352537
454 Ga0068858_100375816
455 Ga0068860_100032103
456 Ga0097621_100000737
457 Ga0097621_100012886
458 Ga0097621_100013055
459 Ga0097621_100271791
460 Ga0097621_100279279
461 Ga0097621_100384892
462 Ga0068871_100000187
463 Ga0068871_100018932
464 Ga0068871_100130330
465 Ga0068871_100216849
466 Ga0068865_100025365
467 Ga0068865_100050223
468 Ga0105240_10000582
469 Ga0105240_10028830
470 Ga0105240_10030372
471 Ga0105240_10033409
472 Ga0105240_10037533
473 Ga0105240_10090973
474 Ga0105240_10108275
475 Ga0105240_10246661
476 Ga0105240_10292491
477 Ga0105240_10433136
478 Ga0105240_10516843
479 Ga0105240_10769557
480 Ga0105245_10031611
481 Ga0105245_10201951
482 Ga0105247_10026137
483 Ga0105247_10101679
484 Ga0105243_10019488
485 Ga0105241_10013063
486 Ga0105241_10034630
487 Ga0105241_10241401
488 Ga0105241_10279480
489 Ga0105241_10342632
490 Ga0105242_10019885
491 Ga0105242_10228094
492 Ga0105242_10310178
493 Ga0105248_10000015
494 Ga0105248_10016413
495 Ga0105248_10443231
496 Ga0105237_10031481
497 Ga0105237_10094890
498 Ga0105237_10111712
499 Ga0105237_10143132
500 Ga0105237_10147673
501 Ga0105237_10199260
502 Ga0105237_10333254
503 Ga0105238_10003071
504 Ga0105238_10061201
505 Ga0105238_10080470
506 Ga0105238_10095864
507 Ga0105238_10122358
508 Ga0105238_10130803
509 Ga0105238_10200322
510 Ga0105249_10396307
511 Ga0105239_10003777
512 Ga0105239_10012621
513 Ga0105239_10071175
514 Ga0105239_10091860
515 Ga0105239_10132393
516 Ga0105239_10157325
517 Ga0105239_10221220
518 Ga0105239_10224086
519 Ga0105239_10295546
520 Ga0105246_10007357
521 Ga0105246_10059563
522 Ga0157370_10127654
523 Ga0157369_10018057
524 Ga0157369_10097422
525 Ga0157374_10047467
526 Ga0157378_10047987
527 Ga0157378_10109099
528 Ga0157378_10192259
529 Ga0163162_10044843
530 Ga0163162_10048577
531 Ga0163162_10228604
532 Ga0157372_10028781
533 Ga0157372_10033495
534 Ga0157372_10046024
535 Ga0157372_10526953
536 Ga0157375_10236699
537 Ga0163163_10000150
538 Ga0157379_10040069
539 Ga0157379_10062677
540 Ga0157379_10078670
541 Ga0157379_10476839
542 Ga0163161_10032941
543 Ga0213876_10000435
544 Ga0207427_106196
545 Ga0209233_1000006
546 Ga0207642_10003606
547 Ga0207645_10004703
548 Ga0207705_10030473
549 Ga0207654_10115883
550 Ga0207707_10000002
551 Ga0207707_10090620
552 Ga0207695_10000004
553 Ga0207695_10022461
554 Ga0207695_10025910
555 Ga0207695_10030633
556 Ga0207695_10034716
557 Ga0207695_10040156
558 Ga0207695_10174482
559 Ga0207695_10251737
560 Ga0207695_10334829
561 Ga0207695_10359036
562 Ga0207671_10008697
563 Ga0207671_10038509
564 Ga0207671_10117362
565 Ga0207671_10148489
566 Ga0207663_10298075
567 Ga0207660_10000010
568 Ga0207660_10138962
569 Ga0207657_10040722
570 Ga0207649_10077018
571 Ga0207649_10412422
572 Ga0207652_10000053
573 Ga0207694_10000015
574 Ga0207694_10032966
575 Ga0207694_10074540
576 Ga0207694_10375023
577 Ga0207650_10070752
578 Ga0207650_10240925
579 Ga0207700_10329012
580 Ga0207644_10388507
581 Ga0207686_10010432
582 Ga0207686_10036147
583 Ga0207709_10015963
584 Ga0207691_10102185
585 Ga0207711_10000003
586 Ga0207711_10000005
587 Ga0207711_10000009
588 Ga0207711_10014425
589 Ga0207689_10002312
590 Ga0207661_10264118
591 Ga0207661_10466628
592 Ga0207679_10200942
593 Ga0207667_10000226
594 Ga0207667_10005475
595 Ga0207667_10049691
596 Ga0207667_10139410
597 Ga0207667_10278987
598 Ga0207651_10025638
599 Ga0207640_10464569
600 Ga0207658_10166727
601 Ga0207677_10066340
602 Ga0207677_10136234
603 Ga0207639_10017282
604 Ga0207639_10036092
605 Ga0207639_10133335
606 Ga0207639_10197552
607 Ga0207708_10205108
608 Ga0207702_10026888
609 Ga0207702_10146365
610 Ga0207702_10166024
611 Ga0207641_10042277
612 Ga0207648_10013145
613 Ga0207648_10023567
614 Ga0207683_10004408
615 Ga0207683_10014416
616 Ga0207683_10143655
617 Ga0207683_10273047
618 Ga0207698_10002329
619 Ga0207698_10057909
620 Ga0207698_10404182
621 Ga0207698_10449780
622 Ga0268266_10001115
623 Ga0268266_10011187
624 Ga0268266_10032268
625 Ga0268266_10037131
626 Ga0268266_10124584
627 Ga0268266_10241186
628 Ga0268266_10596814
629 Ga0265337_1047098
630 Ga0265334_10012835
631 Ga0265318_10000025
632 Ga0265338_10000007
633 Ga0265338_10008470
634 Ga0265325_10000001
635 Ga0265325_10000845
636 Ga0265325_10045768
637 Ga0265325_10065121
638 Ga0265340_10000052
639 Ga0265340_10002920
640 Ga0265340_10020307
641 Ga0265340_10021165
642 Ga0265339_10000291
643 Ga0265339_10006911
644 Ga0265339_10008997
645 Ga0265339_10124720
646 Ga0265331_10003521
647 Ga0265331_10014217
648 Ga0265316_10000747
649 Ga0265316_10016835
650 Ga0265316_10046266
651 Ga0265316_10196251
652 Ga0265313_10000650
653 Ga0265313_10018301
654 Ga0265313_10054967
655 Ga0265314_10002173
656 Ga0265314_10030588
657 Ga0265314_10037404
658 Ga0265314_10132433
659 Ga0265314_10170435
660 Ga0265314_10181503
661 Ga0265342_10003120
662 Ga0265342_10004748
663 Ga0265342_10013088
664 Ga0265342_10016018
665 Ga0265342_10018378
666 Ga0307516_10033213
667 Ga0307516_10059709
668 Ga0307516_10223419
669 Ga0373939_0022612
670 Ga0373927_0053936
671 Ga0395900_0144139
672 Ga0395898_0147305
673 Ga0395901_0019435
674 Ga0395901_0513408
675 Ga0436365_0729755
676 Ga0436365_1797404
677 Ga0495638_0150002
678 Ga0495618_0110541
679 Ga0495628_0270573
680 Ga0495652_0091118
681 Ga0495587_0049397
682 Ga0495587_0192359
683 Ga0495621_0025869
684 Ga0495622_0065949
685 Ga0495611_0099569
686 Ga0495674_0087232
687 Ga0495672_0162222
688 Ga0495675_0055359
689 Ga0495602_0158598
690 Ga0496121_0000701
691 Ga0495682_0004311
692 Ga0501031_0015928
693 Ga0501032_0003843
694 Ga0501032_0455114
695 Ga0501033_0016002
696 Ga0501033_0059734
697 Ga0501034_0019668
698 Ga0501034_0185787
699 Ga0501034_0233498
700 Ga0501034_0396562
701 Ga0501036_0003198
702 Ga0501036_0058366
703 Ga0501037_0022891
704 Ga0501037_0067462
705 Ga0501038_0107701
706 Ga0501038_0180998
707 Ga0501039_0028021
708 Ga0501042_0041795
709 Ga0501043_0045683
710 Ga0501043_0134091
711 Ga0501046_0027000
712 Ga0501046_0073720
713 Ga0501047_0015315
714 Ga0501047_0097642
715 Ga0501047_0197316
716 Ga0501047_0333223
717 Ga0501047_0348753
718 Ga0501047_0363226
719 Ga0501047_0457356
720 Ga0501047_0461340
721 Ga0501048_0002407
722 Ga0501067_0002203
723 Ga0501068_0001838
724 Ga0501069_0004160
725 Ga0501070_0239919
726 Ga0501072_0011201
727 Ga0501073_0020912
728 Ga0501073_0104205
729 Ga0501073_0252601
730 Ga0501074_0002366
731 Ga0501074_0243976
732 Ga0501076_0191102
733 Ga0501079_0005905
734 Ga0501080_0009274
735 Ga0501080_0022596
736 Ga0501080_0220720
737 Ga0501080_0349102
738 Ga0501080_0442386
739 Ga0501083_0000426
740 Ga0501083_0010796
741 Ga0501083_0185062
742 Ga0501035_0004610
743 Ga0501035_0012193
744 Ga0501035_0180876
745 Ga0501044_0002266
746 Ga0501044_0010089
747 Ga0501044_0021972
748 Ga0501044_0025168
749 Ga0501044_0029604
750 Ga0501044_0029749
751 Ga0501045_0059980
752 Ga0500643_000008
753 Ga0500555_042155
754 Ga0500595_000827
755 Ga0500595_014085
756 Ga0500595_031932
757 Ga0500655_009427
758 Ga0500568_0014796
759 Ga0500573_0000062
760 Ga0500619_033172
761 Ga0500645_016424
762 Ga0501084_0000074
763 Ga0501084_0004763
764 Ga0501082_0007756
765 Ga0501082_0034679

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03331

LpxC

UDP-3-O-acyl N-acetylglycosamine deacetylase

9

270

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ci8-assembly2.cif.gz_B crystal structure of p.aeruginosa lpxc in complex with inhibitor 0.9778 1 280
3nzk-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9755 1 280
4mdt-assembly4.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9748 4 280
7ci8-assembly2.cif.gz_B crystal structure of p.aeruginosa lpxc in complex with inhibitor 0.9744 1 280
7k9a-assembly2.cif.gz_C crystal structure of p. aeruginosa lpxc with n-hydroxyformamide inhibitor 0.9736 1 280
ID Description Score Start End Superfamily
2vesC02 Alpha Beta;2-Layer Sandwich;lpxc deacetylase, domain 1;lpxc deacetylase, domain 2 0.966 127 276 3.30.1700.10
3p3gA01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;lpxc deacetylase, domain 1 0.9616 1 121 3.30.230.20
af_Q10PS1_24_147_3.30.230.20 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;lpxc deacetylase, domain 1 0.9602 3 122 3.30.230.20
3p3cA02 Alpha Beta;2-Layer Sandwich;lpxc deacetylase, domain 1;lpxc deacetylase, domain 2 0.9275 128 270 3.30.1700.10
af_Q10PS1_24_147_3.30.230.20 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;lpxc deacetylase, domain 1 0.9228 3 122 3.30.230.20
ID Description Score Start End GO Terms
AF-A0A2V7Z6I2-F1-model_v4 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 0.9915 1 89 GO:0009245
GO:0016020
GO:0103117
AF-A0A1Q3JCJ7-F1-model_v4 deleted 0.9903 1 280
AF-A0A2N2F6X8-F1-model_v4 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 0.9872 1 103 GO:0009245
GO:0016020
GO:0103117
AF-A0A136QIH9-F1-model_v4 deleted 0.9871 1 149
AF-A0A7C7NGS9-F1-model_v4 UDP-3-O-acyl-N-acetylglucosamine deacetylase (EC 3.5.1.108) 0.9869 1 159 GO:0009245
GO:0016020
GO:0046872
GO:0103117

Map