F429415

General Info

Members Datasets Scaffolds Average Seq Length
382 233 764 485

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0069756|Ga0501033_0069756_656_2227
Length 523
Sequence VPSSTPFVGGPDAVRHPLLRHAAPTDEHGSWGGDGMDSGTLTWISIVVALIIDFGLRIVAIIVVPRNRRPTSATAWLLAIYFIPYVGWLFFLLIGSYKLPKQRRLRQQRINEFILESTEGIERVRRDHPWPPWLESVVRLNRSVGAMPLVGGNEANLIGDYQASLDAMTNAVKTATRYVHVEFYILSWDDTTGPFFDALEAAVKRGVTVRVLLDHIASLRTRDYKRTIKRLTAMGAQWRLMLPVQPLKGKYQRPDLRNHRKVLVVDGRVGFMGSQNVIDRTYNKRSNIRRGLKWKELVARLEGPIVAGLNAIFITDWYSETGELLDRERDPIRVPSTREEELDCQLVPSGPGFDNENNLKLFLALLYYATEQIIITSPYFVPDEAMLTALTTAVQRGIRVELFVSEIGDQALVYHAQRSYYEQLLRAGVTIWMYKAPYILHAKHFTIDDEVAVIGSSNMDMRSFLLNAEISLMVRGRSFVACLREVEQGYRDASKRLTLDEWLRQPLRSTVLDNLARLTSALQ

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
13 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
14 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
15 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
58 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
61 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
99 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
103 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
104 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
105 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
110 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
113 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
114 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
115 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
154 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
155 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
156 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
157 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
158 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
159 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
160 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
161 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
162 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
163 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
164 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
165 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
166 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
169 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
170 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
171 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
172 2643221546 Microbacterium sp. Root53 Isolate Unclassified
173 2643221549 Agromyces sp. Root1464 Isolate Unclassified
174 2643221553 Microbacterium sp. Root553 Isolate Unclassified
175 2643221566 Microbacterium sp. Root166 Isolate Unclassified
176 2643221572 Leifsonia sp. Root60 Isolate Unclassified
177 2643221616 Leifsonia sp. Root227 Isolate Unclassified
178 2643221619 Agromyces sp. Root81 Isolate Unclassified
179 2643221630 Microbacterium sp. Root322 Isolate Unclassified
180 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
181 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
182 2643221649 Leifsonia sp. Root4 Isolate Unclassified
183 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
184 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
185 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
186 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
187 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
188 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
189 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
190 2773857759 Microbacterium sp. 1294 Isolate Unclassified
191 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
192 2808606372 Agromyces sp. 23-23 Isolate Unclassified
193 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
194 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
195 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
196 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
197 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
198 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
199 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
200 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
201 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
202 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
203 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
204 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
205 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
206 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
207 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
208 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
209 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
210 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
211 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
212 2919395869 Microbacterium resistens 2980 Isolate Unclassified
213 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
214 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
215 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
216 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
217 2928153084 Leifsonia sp. 563 Isolate Unclassified
218 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
219 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
220 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
221 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
222 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
223 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
224 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
225 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
226 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
227 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
228 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
229 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
230 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
231 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
232 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
233 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.41
Metatranscriptomes 0.52
Isolates 18.06

Biome Distribution

Category Percentage (%)
Aerial Root 0.26
Bulb 0
Endosphere 15.97
Nodule 0
Rhizoplane 2.36
Rhizosphere 62.04
Stem 0
Stem Tuber 0.26
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_0069756 3300049570 Bacteria 2583
2 LJQas_1001521 3300000549 Bacteria 3450
3 JGI24739J22299_10034548 3300001989 Bacteria 1722
4 JGI24735J21928_10000610 3300002067 Bacteria 12586
5 JGI25154J39366_1003193 3300002738 Bacteria 3609
6 JGI25164J39214_1000186 3300002772 Bacteria 54746
7 JGI25165J46597_1000055 3300003214 Bacteria 224187
8 Ga0006562J51391_1011799 3300003578 Bacteria 14267
9 Ga0055539_1000019 3300003752 Bacteria 341727
10 Ga0055533_1000023 3300003756 Bacteria 341727
11 Ga0055525_1000125 3300003759 Bacteria 115822
12 Ga0055527_1000032 3300003760 Bacteria 153292
13 Ga0055542_1000164 3300003762 Bacteria 83529
14 Ga0055529_1000499 3300003763 Bacteria 35503
15 Ga0065714_10012045 3300005288 Bacteria 4005
16 Ga0065714_10079538 3300005288 Bacteria 2507
17 Ga0070658_10000103 3300005327 Bacteria 75387
18 Ga0070658_10012090 3300005327 Bacteria 6930
19 Ga0070658_10037164 3300005327 Bacteria 3924
20 Ga0068868_100061003 3300005338 Bacteria 2987
21 Ga0070661_100026917 3300005344 Bacteria 4139
22 Ga0070668_100080570 3300005347 Bacteria 2551
23 Ga0070675_100038602 3300005354 Bacteria 3893
24 Ga0070659_100056497 3300005366 Bacteria 3095
25 Ga0070663_100049324 3300005455 Bacteria 2989
26 Ga0070678_100013851 3300005456 Bacteria 5070
27 Ga0070678_100149287 3300005456 Bacteria 1881
28 Ga0068853_100227850 3300005539 Bacteria 1704
29 Ga0068855_100004179 3300005563 Bacteria 17623
30 Ga0068855_100042723 3300005563 Bacteria 5371
31 Ga0068854_100092251 3300005578 Bacteria 2256
32 Ga0068856_100163612 3300005614 Bacteria 2236
33 Ga0068851_10000008 3300005834 Bacteria 231006
34 Ga0068870_10024286 3300005840 Bacteria 2998
35 Ga0068863_100065277 3300005841 Bacteria 3443
36 Ga0068858_100001796 3300005842 Bacteria 21881
37 Ga0075365_10005383 3300006038 Bacteria 6896
38 Ga0075364_10001911 3300006051 Bacteria 11592
39 Ga0075364_10031901 3300006051 Bacteria 3385
40 Ga0105244_10003425 3300009036 Bacteria 11308
41 Ga0105244_10010391 3300009036 Bacteria 5648
42 Ga0105240_10023853 3300009093 Bacteria 8080
43 Ga0105240_10243712 3300009093 Bacteria 2082
44 Ga0105245_10007723 3300009098 Bacteria 9418
45 Ga0105245_10051096 3300009098 Bacteria 3706
46 Ga0105243_10001512 3300009148 Bacteria 20307
47 Ga0105243_10051081 3300009148 Bacteria 3269
48 Ga0105241_10000680 3300009174 Bacteria 25612
49 Ga0105248_10153161 3300009177 Bacteria 2601
50 Ga0105237_10000342 3300009545 Bacteria 65619
51 Ga0105237_10061136 3300009545 Bacteria 3767
52 Ga0105238_10211539 3300009551 Bacteria 1915
53 Ga0157371_10036871 3300013102 Bacteria 3501
54 Ga0157371_10070633 3300013102 Bacteria 2472
55 Ga0157371_10078351 3300013102 Bacteria 2341
56 Ga0157370_10021986 3300013104 Bacteria 6352
57 Ga0157369_10000379 3300013105 Bacteria 58791
58 Ga0157369_10044124 3300013105 Bacteria 4855
59 Ga0157369_10063608 3300013105 Bacteria 3975
60 Ga0157369_10085354 3300013105 Bacteria 3374
61 Ga0163162_10287497 3300013306 Bacteria 1776
62 Ga0163163_10223699 3300014325 Bacteria 1931
63 Ga0157380_10008792 3300014326 Bacteria 7216
64 Ga0157380_10009288 3300014326 Bacteria 7039
65 Ga0206354_10752847 3300020081 Bacteria 2515
66 Ga0209566_100031 3300025225 Bacteria 341555
67 Ga0209674_100001 3300025226 Bacteria 4013750
68 Ga0209672_100006 3300025228 Bacteria 1004497
69 Ga0209147_100227 3300025229 Bacteria 55956
70 Ga0209563_100001 3300025230 Bacteria 4013775
71 Ga0209563_100609 3300025230 Bacteria 11639
72 Ga0207427_100054 3300025231 Bacteria 216315
73 Ga0209437_101292 3300025233 Bacteria 6740
74 Ga0209258_104812 3300025242 Bacteria 2450
75 Ga0209646_1000041 3300025246 Bacteria 346024
76 Ga0209677_100001 3300025253 Bacteria 4013787
77 Ga0209677_101476 3300025253 Bacteria 10116
78 Ga0209677_101566 3300025253 Bacteria 9714
79 Ga0209148_1000152 3300025254 Bacteria 153782
80 Ga0209148_1000548 3300025254 Bacteria 35918
81 Ga0209233_1000001 3300025261 Bacteria 2992747
82 Ga0209233_1011352 3300025261 Bacteria 2627
83 Ga0209455_1000134 3300025272 Bacteria 153783
84 Ga0209455_1003210 3300025272 Bacteria 5911
85 Ga0207656_10000005 3300025321 Bacteria 490514
86 Ga0207655_1002108 3300025728 Bacteria 16634
87 Ga0207655_1010364 3300025728 Bacteria 5656
88 Ga0207647_10007091 3300025904 Bacteria 8129
89 Ga0207643_10052222 3300025908 Bacteria 2321
90 Ga0207705_10000001 3300025909 Bacteria 2061880
91 Ga0207705_10006750 3300025909 Bacteria 8482
92 Ga0207705_10009248 3300025909 Bacteria 7172
93 Ga0207654_10000001 3300025911 Bacteria 1816198
94 Ga0207695_10006257 3300025913 Bacteria 15497
95 Ga0207695_10006843 3300025913 Bacteria 14681
96 Ga0207671_10000016 3300025914 Bacteria 435413
97 Ga0207671_10040620 3300025914 Bacteria 3443
98 Ga0207657_10032685 3300025919 Bacteria 4698
99 Ga0207694_10000019 3300025924 Bacteria 312382
100 Ga0207687_10015025 3300025927 Bacteria 5071
101 Ga0207687_10026994 3300025927 Bacteria 3849
102 Ga0207690_10004482 3300025932 Bacteria 8246
103 Ga0207709_10015394 3300025935 Bacteria 4240
104 Ga0207709_10029028 3300025935 Bacteria 3203
105 Ga0207709_10139773 3300025935 Bacteria 1663
106 Ga0207711_10002940 3300025941 Bacteria 14896
107 Ga0207667_10020167 3300025949 Bacteria 7421
108 Ga0207667_10034534 3300025949 Bacteria 5430
109 Ga0207667_10054912 3300025949 Bacteria 4189
110 Ga0207668_10011560 3300025972 Bacteria 5370
111 Ga0207640_10046173 3300025981 Bacteria 2801
112 Ga0207677_10061833 3300026023 Bacteria 2595
113 Ga0207677_10155884 3300026023 Bacteria 1768
114 Ga0207703_10000238 3300026035 Bacteria 62524
115 Ga0207702_10041766 3300026078 Bacteria 3846
116 Ga0207676_10205598 3300026095 Bacteria 1743
117 Ga0207674_10012107 3300026116 Bacteria 9657
118 Ga0207683_10033040 3300026121 Bacteria 4494
119 Ga0207698_10001622 3300026142 Bacteria 13093
120 Ga0207428_10014087 3300027907 Bacteria 6963
121 Ga0307515_10110523 3300028794 Bacteria 3215
122 Ga0307408_100017380 3300031548 Bacteria 4812
123 Ga0307514_10005831 3300031649 Bacteria 10877
124 Ga0307514_10006292 3300031649 Bacteria 10391
125 Ga0307405_10143247 3300031731 Bacteria 1670
126 Ga0307410_10034760 3300031852 Bacteria 3268
127 Ga0307410_10038317 3300031852 Bacteria 3139
128 Ga0307410_10042395 3300031852 Bacteria 3008
129 Ga0307406_10000016 3300031901 Bacteria 106175
130 Ga0307406_10001063 3300031901 Bacteria 15283
131 Ga0307406_10001298 3300031901 Bacteria 14001
132 Ga0307406_10019260 3300031901 Bacteria 4003
133 Ga0307406_10092371 3300031901 Bacteria 2041
134 Ga0307407_10050247 3300031903 Bacteria 2385
135 Ga0307409_100042895 3300031995 Bacteria 3392
136 Ga0307409_100109768 3300031995 Bacteria 2310
137 Ga0307409_100130992 3300031995 Bacteria 2143
138 Ga0307416_100020526 3300032002 Bacteria 4717
139 Ga0307416_100026970 3300032002 Bacteria 4244
140 Ga0307416_100090381 3300032002 Bacteria 2625
141 Ga0307414_10034883 3300032004 Bacteria 3341
142 Ga0307415_100101476 3300032126 Bacteria 2112
143 Ga0307415_100164316 3300032126 Bacteria 1724
144 Ga0395899_0001849 3300037312 Bacteria 17519
145 Ga0395900_0010412 3300037418 Bacteria 9510
146 Ga0395900_0192304 3300037418 Bacteria 2069
147 Ga0395898_0143565 3300037466 Bacteria 2285
148 Ga0395901_0026168 3300038443 Bacteria 5990
149 Ga0395901_0084317 3300038443 Bacteria 3321
150 Ga0395901_0120634 3300038443 Bacteria 2755
151 Ga0439466_0008294 3300041411 Bacteria 3916
152 Ga0451793_0741242 3300041452 Bacteria 3709
153 Ga0439448_0016758 3300042005 Bacteria 2232
154 Ga0439449_0002822 3300042007 Bacteria 6756
155 Ga0466965_0000037 3300044683 Bacteria 47569
156 Ga0466965_0026851 3300044683 Bacteria 2792
157 Ga0466965_0031952 3300044683 Bacteria 2570
158 Ga0466965_0059336 3300044683 Bacteria 1909
159 Ga0466966_0033444 3300044684 Bacteria 3329
160 Ga0466961_0015907 3300044693 Bacteria 4829
161 Ga0466961_0037900 3300044693 Bacteria 3092
162 Ga0466970_0000135 3300044765 Bacteria 33904
163 Ga0466970_0003621 3300044765 Bacteria 7533
164 Ga0466970_0009725 3300044765 Bacteria 4866
165 Ga0466970_0041210 3300044765 Bacteria 2453
166 Ga0466970_0048592 3300044765 Bacteria 2262
167 Ga0466960_0044369 3300044901 Bacteria 2119
168 Ga0466959_0007690 3300045049 Bacteria 7577
169 Ga0495627_000238 3300046453 Bacteria 57919
170 Ga0495590_0000254 3300046457 Bacteria 29062
171 Ga0495650_0000866 3300046471 Bacteria 36093
172 Ga0495588_0005491 3300046674 Bacteria 5646
173 Ga0495670_0075592 3300046691 Bacteria 1710
174 Ga0496102_0071488 3300048905 Bacteria 3186
175 Ga0496103_0098512 3300048906 Bacteria 1849
176 Ga0496107_0053028 3300048910 Bacteria 2926
177 Ga0496109_0024450 3300048912 Bacteria 5371
178 Ga0496110_0012266 3300048913 Bacteria 7043
179 Ga0496113_0137864 3300048916 Bacteria 1918
180 Ga0496115_0019615 3300048918 Bacteria 5205
181 Ga0496115_0049615 3300048918 Bacteria 3360
182 Ga0496117_0000178 3300048920 Bacteria 131062
183 Ga0496117_0000196 3300048920 Bacteria 119243
184 Ga0496117_0000737 3300048920 Bacteria 51396
185 Ga0496117_0004795 3300048920 Bacteria 14659
186 Ga0496117_0005093 3300048920 Bacteria 14054
187 Ga0496117_0007057 3300048920 Bacteria 11111
188 Ga0496117_0052741 3300048920 Bacteria 2862
189 Ga0496117_0096092 3300048920 Bacteria 1891
190 Ga0496118_0000472 3300048921 Bacteria 66796
191 Ga0496118_0006045 3300048921 Bacteria 13483
192 Ga0496118_0015184 3300048921 Bacteria 7151
193 Ga0496119_0000888 3300048922 Bacteria 39161
194 Ga0496119_0002166 3300048922 Bacteria 22050
195 Ga0496119_0041063 3300048922 Bacteria 2951
196 Ga0496120_0000820 3300048923 Bacteria 44395
197 Ga0496120_0008381 3300048923 Bacteria 7509
198 Ga0496120_0017803 3300048923 Bacteria 4593
199 Ga0496120_0018182 3300048923 Bacteria 4538
200 Ga0496120_0029988 3300048923 Bacteria 3314
201 Ga0496121_0000015 3300048924 Bacteria 571958
202 Ga0496121_0124140 3300048924 Bacteria 1944
203 Ga0496122_0000105 3300048925 Bacteria 194509
204 Ga0496122_0001688 3300048925 Bacteria 34239
205 Ga0496122_0014043 3300048925 Bacteria 7777
206 Ga0496122_0023526 3300048925 Bacteria 5427
207 Ga0496122_0052267 3300048925 Bacteria 3095
208 Ga0496123_0000075 3300048926 Bacteria 194499
209 Ga0496124_0000040 3300048927 Bacteria 307061
210 Ga0496125_0000550 3300048928 Bacteria 64700
211 Ga0496125_0001667 3300048928 Bacteria 31185
212 Ga0496125_0030133 3300048928 Bacteria 4859
213 Ga0496125_0105565 3300048928 Bacteria 2059
214 Ga0496126_0002640 3300048929 Bacteria 23808
215 Ga0496126_0017122 3300048929 Bacteria 7228
216 Ga0496126_0027873 3300048929 Bacteria 5388
217 Ga0496126_0049058 3300048929 Bacteria 3855
218 Ga0496126_0078119 3300048929 Bacteria 2933
219 Ga0501032_0002122 3300049569 Bacteria 15637
220 Ga0501032_0007027 3300049569 Bacteria 8254
221 Ga0501032_0014165 3300049569 Bacteria 5652
222 Ga0501033_0003904 3300049570 Bacteria 12121
223 Ga0501033_0010413 3300049570 Bacteria 7131
224 Ga0501033_0028032 3300049570 Bacteria 4232
225 Ga0501033_0041806 3300049570 Bacteria 3418
226 Ga0501033_0112611 3300049570 Bacteria 1979
227 Ga0501034_0001530 3300049571 Bacteria 30359
228 Ga0501034_0013612 3300049571 Bacteria 8370
229 Ga0501034_0038426 3300049571 Bacteria 4847
230 Ga0501034_0078860 3300049571 Bacteria 3297
231 Ga0501034_0127652 3300049571 Bacteria 2528
232 Ga0501034_0175464 3300049571 Bacteria 2109
233 Ga0501036_0000506 3300049572 Bacteria 27913
234 Ga0501036_0046848 3300049572 Bacteria 3661
235 Ga0501036_0192757 3300049572 Bacteria 1714
236 Ga0501037_0000337 3300049573 Bacteria 39757
237 Ga0501037_0007052 3300049573 Bacteria 8208
238 Ga0501037_0008870 3300049573 Bacteria 7365
239 Ga0501037_0016663 3300049573 Bacteria 5408
240 Ga0501038_0001578 3300049574 Bacteria 21106
241 Ga0501038_0039468 3300049574 Bacteria 4129
242 Ga0501042_0027442 3300049578 Bacteria 4004
243 Ga0501043_0003695 3300049579 Bacteria 12572
244 Ga0501043_0015317 3300049579 Bacteria 6006
245 Ga0501043_0017353 3300049579 Bacteria 5646
246 Ga0501043_0057271 3300049579 Bacteria 3060
247 Ga0501043_0060024 3300049579 Bacteria 2985
248 Ga0501046_0001251 3300049580 Bacteria 24576
249 Ga0501047_0001291 3300049581 Bacteria 24721
250 Ga0501047_0005747 3300049581 Bacteria 11675
251 Ga0501047_0007394 3300049581 Bacteria 10330
252 Ga0501047_0052417 3300049581 Bacteria 3943
253 Ga0501047_0062485 3300049581 Bacteria 3592
254 Ga0501047_0092679 3300049581 Bacteria 2900
255 Ga0501047_0106661 3300049581 Bacteria 2682
256 Ga0501047_0142015 3300049581 Bacteria 2279
257 Ga0501048_0002192 3300049582 Bacteria 14862
258 Ga0501048_0019484 3300049582 Bacteria 4977
259 Ga0501070_0006978 3300049586 Bacteria 9610
260 Ga0501070_0007659 3300049586 Bacteria 9165
261 Ga0501070_0133505 3300049586 Bacteria 2050
262 Ga0501070_0188236 3300049586 Bacteria 1697
263 Ga0501071_0056302 3300049587 Bacteria 2840
264 Ga0501073_0001026 3300049589 Bacteria 20212
265 Ga0501073_0003701 3300049589 Bacteria 11486
266 Ga0501073_0119375 3300049589 Bacteria 1828
267 Ga0501074_0075889 3300049590 Bacteria 2413
268 Ga0501080_0000709 3300049742 Bacteria 26768
269 Ga0501080_0012694 3300049742 Bacteria 7725
270 Ga0501083_0000016 3300049744 Bacteria 156309
271 Ga0501083_0039301 3300049744 Bacteria 3214
272 Ga0501035_0004446 3300049822 Bacteria 13304
273 Ga0501035_0009018 3300049822 Bacteria 9277
274 Ga0501035_0053551 3300049822 Bacteria 3607
275 Ga0501035_0139063 3300049822 Bacteria 2112
276 Ga0501044_0010718 3300049823 Bacteria 9946
277 Ga0501044_0084339 3300049823 Bacteria 3211
278 Ga0501044_0128950 3300049823 Bacteria 2524
279 Ga0501044_0272981 3300049823 Bacteria 1626
280 Ga0501045_0024771 3300049824 Bacteria 4310
281 Ga0501045_0058821 3300049824 Bacteria 2815
282 nmdc:mga00v17_18825_c2 3300050491 Bacteria 3446
283 nmdc:mga0yw44_13854_c1 3300050492 Bacteria 4261
284 nmdc:mga0sz30_21257_c1 3300050516 Bacteria 2624
285 Ga0500635_0000002 3300053080 Bacteria 265613
286 Ga0500643_000191 3300053087 Bacteria 58540
287 Ga0500651_0001585 3300053093 Bacteria 11555
288 Ga0500556_0000041 3300053104 Bacteria 134317
289 Ga0500556_0000188 3300053104 Bacteria 50480
290 Ga0500562_008576 3300053108 Bacteria 2581
291 Ga0500593_006883 3300053117 Bacteria 4582
292 Ga0500559_0000162 3300053136 Bacteria 52858
293 Ga0500559_0001762 3300053136 Bacteria 11882
294 Ga0500559_0003143 3300053136 Bacteria 8197
295 Ga0500559_0013168 3300053136 Bacteria 3505
296 Ga0500559_0013458 3300053136 Bacteria 3465
297 Ga0500559_0016860 3300053136 Bacteria 3086
298 Ga0500568_0000003 3300053139 Bacteria 863587
299 Ga0500568_0000315 3300053139 Bacteria 38512
300 Ga0500568_0000535 3300053139 Bacteria 28028
301 Ga0500568_0000663 3300053139 Bacteria 24875
302 Ga0500568_0003092 3300053139 Bacteria 9497
303 Ga0500568_0027793 3300053139 Bacteria 2363
304 Ga0500573_0003109 3300053140 Bacteria 8510
305 Ga0500573_0005150 3300053140 Bacteria 6973
306 Ga0500573_0008254 3300053140 Bacteria 5732
307 Ga0500588_0007662 3300053146 Bacteria 2497
308 Ga0500590_014465 3300053148 Bacteria 4068
309 Ga0500616_0000088 3300053153 Bacteria 191662
310 Ga0500616_0000126 3300053153 Bacteria 134967
311 Ga0500616_0001901 3300053153 Bacteria 18702
312 Ga0500616_0012614 3300053153 Bacteria 4943
313 Ga0500620_000473 3300053155 Bacteria 7136
314 2537900144 2537561592 Bacteria 4348607
315 2587863546 2585428094 Bacteria 3604039
316 2643734577 2643221542 Bacteria 3563959
317 2643752127 2643221546 Bacteria 2910897
318 2643768700 2643221549 Bacteria 4042819
319 2643783859 2643221553 Bacteria 3544260
320 2643847555 2643221566 Bacteria 3460379
321 2643876542 2643221572 Bacteria 3614809
322 2644098061 2643221616 Bacteria 4066575
323 2644112106 2643221619 Bacteria 4158469
324 2644172703 2643221630 Bacteria 3601215
325 2644182236 2643221632 Bacteria 3406696
326 2644197335 2643221635 Bacteria 2632343
327 2644278000 2643221649 Bacteria 3867359
328 2644279130 2643221649 Bacteria 3867359
329 2644383597 2643221669 Bacteria 3611286
330 2644678939 2643221724 Bacteria 3593515
331 2723643251 2721755702 Bacteria 4373124
332 2729909538 2728369276 Bacteria 5610032
333 2730228451 2728369380 Bacteria 3620317
334 2747955288 2747842429 Bacteria 3914386
335 2753302749 2751185788 Bacteria 4541048
336 2774382721 2773857759 Bacteria 2963774
337 2808884609 2808606368 Bacteria 3174172
338 2808900916 2808606372 Bacteria 4649509
339 2844843482 2844841374 Bacteria 3917147
340 2844854229 2844852863 Bacteria 3849151
341 2852648292 2852646457 Bacteria 3408613
342 2852667193 2852663356 Bacteria 4090475
343 2852677739 2852677369 Bacteria 3768884
344 2857727046 2857723135 Bacteria 4217853
345 2857733385 2857729791 Bacteria 4040535
346 2857739253 2857737099 Bacteria 3104305
347 2862994365 2862993130 Bacteria 3860849
348 2870628167 2870628048 Bacteria 3696012
349 2884766621 2884763398 Bacteria 4091164
350 2895660750 2895660088 Bacteria 3782833
351 2904434093 2904430863 Bacteria 3486923
352 2904504040 2904501621 Bacteria 3401437
353 2908677005 2908674828 Bacteria 3382763
354 2909076817 2909074476 Bacteria 3436050
355 2919039429 2919039151 Bacteria 3391018
356 2919042820 2919042368 Bacteria 3905917
357 2919055489 2919055335 Bacteria 3875751
358 2919397041 2919395869 Bacteria 3704152
359 2919444996 2919443155 Bacteria 4072969
360 2919445479 2919443155 Bacteria 4072969
361 2919525628 2919523602 Bacteria 3788128
362 2919526626 2919523602 Bacteria 3788128
363 2928106215 2928104781 Bacteria 3877447
364 2928121590 2928121344 Bacteria 3972376
365 2928153643 2928153084 Bacteria 4020257
366 2928502147 2928500415 Bacteria 3384541
367 2935411999 2935409751 Bacteria 4179611
368 2939657680 2939657138 Bacteria 3740283
369 2939661782 2939660829 Bacteria 3784848
370 2945970365 2945968032 Bacteria 4111363
371 2946042744 2946041624 Bacteria 4191385
372 2946082315 2946080515 Bacteria 4310960
373 2964327619 2964326757 Bacteria 3290868
374 2966923524 2966921586 Bacteria 3092803
375 2966925536 2966924647 Bacteria 3268643
376 2977252910 2977251589 Bacteria 2952848
377 2984554897 2984551494 Bacteria 3877562
378 8004183293 8004182704 Bacteria 3391155
379 8004215112 8004212874 Bacteria 2861420
380 8056039464 8056037122 Bacteria 3854319
381 8057347297 8057345674 Bacteria 4160394
382 8057348938 8057345674 Bacteria 4160394
383 Ga0501033_0069756
384 LJQas_1001521
385 JGI24739J22299_10034548
386 JGI24735J21928_10000610
387 JGI25154J39366_1003193
388 JGI25164J39214_1000186
389 JGI25165J46597_1000055
390 Ga0006562J51391_1011799
391 Ga0055539_1000019
392 Ga0055533_1000023
393 Ga0055525_1000125
394 Ga0055527_1000032
395 Ga0055542_1000164
396 Ga0055529_1000499
397 Ga0065714_10012045
398 Ga0065714_10079538
399 Ga0070658_10000103
400 Ga0070658_10012090
401 Ga0070658_10037164
402 Ga0068868_100061003
403 Ga0070661_100026917
404 Ga0070668_100080570
405 Ga0070675_100038602
406 Ga0070659_100056497
407 Ga0070663_100049324
408 Ga0070678_100013851
409 Ga0070678_100149287
410 Ga0068853_100227850
411 Ga0068855_100004179
412 Ga0068855_100042723
413 Ga0068854_100092251
414 Ga0068856_100163612
415 Ga0068851_10000008
416 Ga0068870_10024286
417 Ga0068863_100065277
418 Ga0068858_100001796
419 Ga0075365_10005383
420 Ga0075364_10001911
421 Ga0075364_10031901
422 Ga0105244_10003425
423 Ga0105244_10010391
424 Ga0105240_10023853
425 Ga0105240_10243712
426 Ga0105245_10007723
427 Ga0105245_10051096
428 Ga0105243_10001512
429 Ga0105243_10051081
430 Ga0105241_10000680
431 Ga0105248_10153161
432 Ga0105237_10000342
433 Ga0105237_10061136
434 Ga0105238_10211539
435 Ga0157371_10036871
436 Ga0157371_10070633
437 Ga0157371_10078351
438 Ga0157370_10021986
439 Ga0157369_10000379
440 Ga0157369_10044124
441 Ga0157369_10063608
442 Ga0157369_10085354
443 Ga0163162_10287497
444 Ga0163163_10223699
445 Ga0157380_10008792
446 Ga0157380_10009288
447 Ga0206354_10752847
448 Ga0209566_100031
449 Ga0209674_100001
450 Ga0209672_100006
451 Ga0209147_100227
452 Ga0209563_100001
453 Ga0209563_100609
454 Ga0207427_100054
455 Ga0209437_101292
456 Ga0209258_104812
457 Ga0209646_1000041
458 Ga0209677_100001
459 Ga0209677_101476
460 Ga0209677_101566
461 Ga0209148_1000152
462 Ga0209148_1000548
463 Ga0209233_1000001
464 Ga0209233_1011352
465 Ga0209455_1000134
466 Ga0209455_1003210
467 Ga0207656_10000005
468 Ga0207655_1002108
469 Ga0207655_1010364
470 Ga0207647_10007091
471 Ga0207643_10052222
472 Ga0207705_10000001
473 Ga0207705_10006750
474 Ga0207705_10009248
475 Ga0207654_10000001
476 Ga0207695_10006257
477 Ga0207695_10006843
478 Ga0207671_10000016
479 Ga0207671_10040620
480 Ga0207657_10032685
481 Ga0207694_10000019
482 Ga0207687_10015025
483 Ga0207687_10026994
484 Ga0207690_10004482
485 Ga0207709_10015394
486 Ga0207709_10029028
487 Ga0207709_10139773
488 Ga0207711_10002940
489 Ga0207667_10020167
490 Ga0207667_10034534
491 Ga0207667_10054912
492 Ga0207668_10011560
493 Ga0207640_10046173
494 Ga0207677_10061833
495 Ga0207677_10155884
496 Ga0207703_10000238
497 Ga0207702_10041766
498 Ga0207676_10205598
499 Ga0207674_10012107
500 Ga0207683_10033040
501 Ga0207698_10001622
502 Ga0207428_10014087
503 Ga0307515_10110523
504 Ga0307408_100017380
505 Ga0307514_10005831
506 Ga0307514_10006292
507 Ga0307405_10143247
508 Ga0307410_10034760
509 Ga0307410_10038317
510 Ga0307410_10042395
511 Ga0307406_10000016
512 Ga0307406_10001063
513 Ga0307406_10001298
514 Ga0307406_10019260
515 Ga0307406_10092371
516 Ga0307407_10050247
517 Ga0307409_100042895
518 Ga0307409_100109768
519 Ga0307409_100130992
520 Ga0307416_100020526
521 Ga0307416_100026970
522 Ga0307416_100090381
523 Ga0307414_10034883
524 Ga0307415_100101476
525 Ga0307415_100164316
526 Ga0395899_0001849
527 Ga0395900_0010412
528 Ga0395900_0192304
529 Ga0395898_0143565
530 Ga0395901_0026168
531 Ga0395901_0084317
532 Ga0395901_0120634
533 Ga0439466_0008294
534 Ga0451793_0741242
535 Ga0439448_0016758
536 Ga0439449_0002822
537 Ga0466965_0000037
538 Ga0466965_0026851
539 Ga0466965_0031952
540 Ga0466965_0059336
541 Ga0466966_0033444
542 Ga0466961_0015907
543 Ga0466961_0037900
544 Ga0466970_0000135
545 Ga0466970_0003621
546 Ga0466970_0009725
547 Ga0466970_0041210
548 Ga0466970_0048592
549 Ga0466960_0044369
550 Ga0466959_0007690
551 Ga0495627_000238
552 Ga0495590_0000254
553 Ga0495650_0000866
554 Ga0495588_0005491
555 Ga0495670_0075592
556 Ga0496102_0071488
557 Ga0496103_0098512
558 Ga0496107_0053028
559 Ga0496109_0024450
560 Ga0496110_0012266
561 Ga0496113_0137864
562 Ga0496115_0019615
563 Ga0496115_0049615
564 Ga0496117_0000178
565 Ga0496117_0000196
566 Ga0496117_0000737
567 Ga0496117_0004795
568 Ga0496117_0005093
569 Ga0496117_0007057
570 Ga0496117_0052741
571 Ga0496117_0096092
572 Ga0496118_0000472
573 Ga0496118_0006045
574 Ga0496118_0015184
575 Ga0496119_0000888
576 Ga0496119_0002166
577 Ga0496119_0041063
578 Ga0496120_0000820
579 Ga0496120_0008381
580 Ga0496120_0017803
581 Ga0496120_0018182
582 Ga0496120_0029988
583 Ga0496121_0000015
584 Ga0496121_0124140
585 Ga0496122_0000105
586 Ga0496122_0001688
587 Ga0496122_0014043
588 Ga0496122_0023526
589 Ga0496122_0052267
590 Ga0496123_0000075
591 Ga0496124_0000040
592 Ga0496125_0000550
593 Ga0496125_0001667
594 Ga0496125_0030133
595 Ga0496125_0105565
596 Ga0496126_0002640
597 Ga0496126_0017122
598 Ga0496126_0027873
599 Ga0496126_0049058
600 Ga0496126_0078119
601 Ga0501032_0002122
602 Ga0501032_0007027
603 Ga0501032_0014165
604 Ga0501033_0003904
605 Ga0501033_0010413
606 Ga0501033_0028032
607 Ga0501033_0041806
608 Ga0501033_0112611
609 Ga0501034_0001530
610 Ga0501034_0013612
611 Ga0501034_0038426
612 Ga0501034_0078860
613 Ga0501034_0127652
614 Ga0501034_0175464
615 Ga0501036_0000506
616 Ga0501036_0046848
617 Ga0501036_0192757
618 Ga0501037_0000337
619 Ga0501037_0007052
620 Ga0501037_0008870
621 Ga0501037_0016663
622 Ga0501038_0001578
623 Ga0501038_0039468
624 Ga0501042_0027442
625 Ga0501043_0003695
626 Ga0501043_0015317
627 Ga0501043_0017353
628 Ga0501043_0057271
629 Ga0501043_0060024
630 Ga0501046_0001251
631 Ga0501047_0001291
632 Ga0501047_0005747
633 Ga0501047_0007394
634 Ga0501047_0052417
635 Ga0501047_0062485
636 Ga0501047_0092679
637 Ga0501047_0106661
638 Ga0501047_0142015
639 Ga0501048_0002192
640 Ga0501048_0019484
641 Ga0501070_0006978
642 Ga0501070_0007659
643 Ga0501070_0133505
644 Ga0501070_0188236
645 Ga0501071_0056302
646 Ga0501073_0001026
647 Ga0501073_0003701
648 Ga0501073_0119375
649 Ga0501074_0075889
650 Ga0501080_0000709
651 Ga0501080_0012694
652 Ga0501083_0000016
653 Ga0501083_0039301
654 Ga0501035_0004446
655 Ga0501035_0009018
656 Ga0501035_0053551
657 Ga0501035_0139063
658 Ga0501044_0010718
659 Ga0501044_0084339
660 Ga0501044_0128950
661 Ga0501044_0272981
662 Ga0501045_0024771
663 Ga0501045_0058821
664 nmdc:mga00v17_18825_c2
665 nmdc:mga0yw44_13854_c1
666 nmdc:mga0sz30_21257_c1
667 Ga0500635_0000002
668 Ga0500643_000191
669 Ga0500651_0001585
670 Ga0500556_0000041
671 Ga0500556_0000188
672 Ga0500562_008576
673 Ga0500593_006883
674 Ga0500559_0000162
675 Ga0500559_0001762
676 Ga0500559_0003143
677 Ga0500559_0013168
678 Ga0500559_0013458
679 Ga0500559_0016860
680 Ga0500568_0000003
681 Ga0500568_0000315
682 Ga0500568_0000535
683 Ga0500568_0000663
684 Ga0500568_0003092
685 Ga0500568_0027793
686 Ga0500573_0003109
687 Ga0500573_0005150
688 Ga0500573_0008254
689 Ga0500588_0007662
690 Ga0500590_014465
691 Ga0500616_0000088
692 Ga0500616_0000126
693 Ga0500616_0001901
694 Ga0500616_0012614
695 Ga0500620_000473
696 2537900144
697 2587863546
698 2643734577
699 2643752127
700 2643768700
701 2643783859
702 2643847555
703 2643876542
704 2644098061
705 2644112106
706 2644172703
707 2644182236
708 2644197335
709 2644278000
710 2644279130
711 2644383597
712 2644678939
713 2723643251
714 2729909538
715 2730228451
716 2747955288
717 2753302749
718 2774382721
719 2808884609
720 2808900916
721 2844843482
722 2844854229
723 2852648292
724 2852667193
725 2852677739
726 2857727046
727 2857733385
728 2857739253
729 2862994365
730 2870628167
731 2884766621
732 2895660750
733 2904434093
734 2904504040
735 2908677005
736 2909076817
737 2919039429
738 2919042820
739 2919055489
740 2919397041
741 2919444996
742 2919445479
743 2919525628
744 2919526626
745 2928106215
746 2928121590
747 2928153643
748 2928502147
749 2935411999
750 2939657680
751 2939661782
752 2945970365
753 2946042744
754 2946082315
755 2964327619
756 2966923524
757 2966925536
758 2977252910
759 2984554897
760 8004183293
761 8004215112
762 8056039464
763 8057347297
764 8057348938

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00614

PLDc

Phospholipase D Active site motif

436

463

0.94

PF13091

PLDc_2

PLD-like domain

362

488

0.93

PF13396

PLDc_N

Phospholipase_D-nuclease N-terminal

55

96

0.93

PF13091

PLDc_2

PLD-like domain

168

309

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.8643 304 460
1byr-assembly1.cif.gz_A crystal structure of a phospholipase d family member, nuc from salmonella typhimurium 0.8487 304 460
6ohr-assembly5.cif.gz_E structure of compound 5 bound human phospholipase d1 catalytic domain 0.8191 111 438
6ohp-assembly4.cif.gz_D structure of compound 1 (halopemide) bound human phospholipase d2 catalytic domain 0.8157 111 452
6ohq-assembly1.cif.gz_A structure of compound 4 bound human phospholipase d2 catalytic domain 0.8081 111 438
ID Description Score Start End Superfamily
af_P0A6H8_316_458_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9786 318 457 3.30.870.10
af_Q2FWG8_323_468_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.969 316 459 3.30.870.10
af_P0AA84_201_339_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9621 316 451 3.30.870.10
af_Q2FYW4_304_492_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9585 294 482 3.30.870.10
af_P0A6H8_316_458_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.9451 318 457 3.30.870.10
ID Description Score Start End GO Terms
AF-A0A086DVM1-F1-model_v4 deleted 0.9811 379 485
AF-A0A1I7MJL7-F1-model_v4 Cardiolipin synthase (EC 2.7.8.-) 0.9783 9 485 GO:0005886
GO:0008808
GO:0032049
AF-A0A4Q6GTU2-F1-model_v4 Cardiolipin synthase 0.976 267 485 GO:0008808
GO:0016020
GO:0032049
AF-A0A645GYE6-F1-model_v4 Cardiolipin synthase (EC 2.7.8.-) 0.9747 306 485 GO:0030572
GO:0032049
AF-A0A3D3EYT0-F1-model_v4 Cardiolipin synthase 0.9732 299 485 GO:0030572
GO:0032049

Map