F429760

General Info

Members Datasets Scaffolds Average Seq Length
383 263 296 241

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2873151551|2873157572
Length 265
Sequence EEGIRPARGGRGTGDARSAGGARGAPNTRDDDRLTPVLRPVRAGNGFEEALEQILQVVRLGLVPGGERLPSERELADRLGISRVTLREVLKVLQDQGLVESRRGRYGGTFVRRRPEAAGEDELRRRVAHVDVEDALRFREVLEVGAAGLCAAHGLDAGQADRLRDALARTHDAPLAEYRRLDTLLHLTLAELCGSPTLAAQYAAVRATVNDLLDCIPLLVRNLEHSQRQHTALVEAVLDGDADGAREMMREHCAGTAALLRGFLT

Samples

Sample ID Description Type Environment
1 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
2 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
3 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
4 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
5 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
6 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
7 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
8 2643221548 Streptomyces sp. Root55 Isolate Unclassified
9 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
10 2643221647 Streptomyces sp. Root369 Isolate Unclassified
11 2643221670 Streptomyces sp. Root431 Isolate Unclassified
12 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
13 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
14 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
15 2643221714 Streptomyces sp. Root264 Isolate Unclassified
16 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
17 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
18 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
19 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
20 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
21 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
22 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
23 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
24 2808606448 Streptomyces sp. 193411 Isolate Unclassified
25 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
26 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
27 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
28 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
29 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
30 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
31 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
32 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
33 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
34 2862574272 Streptomyces sp. AcE210 Isolate Nodule
35 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
36 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
37 2867369537 Streptomyces sp. Z26 Isolate Unclassified
38 2867428634 Streptomyces sp. RP5T Isolate Unclassified
39 2867475112 Streptomyces sp. TM32 Isolate Unclassified
40 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
41 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
42 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
43 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
44 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
45 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
46 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
47 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
48 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
49 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
50 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
51 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
52 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
53 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
54 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
55 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
56 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
57 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
58 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
59 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
60 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
61 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
62 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
63 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
64 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
65 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
66 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
67 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
68 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
69 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
70 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
71 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
72 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
73 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
74 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
75 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
76 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
77 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
78 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
79 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
80 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
81 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
82 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
83 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
84 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
85 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
86 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
87 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
88 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
89 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
90 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
91 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
92 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
93 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
98 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
101 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
104 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
105 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
106 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
107 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
110 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
116 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
117 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
118 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
119 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
120 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
121 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
122 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
123 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
124 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
125 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
126 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
127 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
128 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
129 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
130 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
131 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
132 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
133 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
134 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
135 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
136 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
137 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
138 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
139 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
140 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
141 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
142 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
143 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
144 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
145 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
146 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
147 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
148 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
149 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
150 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
151 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
152 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
153 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
154 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
155 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
156 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
157 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
158 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
159 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
160 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
161 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
162 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
163 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
164 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
165 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
166 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
167 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
168 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
169 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
170 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
171 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
172 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
173 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
174 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
175 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
176 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
177 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
178 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
179 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
180 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
181 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
182 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
183 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
184 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
185 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
186 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
187 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
188 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
189 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
190 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
191 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
192 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
193 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
194 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
195 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
196 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
197 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
198 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
199 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
200 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
201 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
202 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
203 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
204 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
205 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
206 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
207 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
208 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
209 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
210 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
211 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
212 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
213 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
214 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
215 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
216 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
217 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
218 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
219 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
220 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
221 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
222 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
223 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
224 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
225 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
227 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
228 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
229 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
230 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
231 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
232 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
233 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
234 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
235 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
236 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
237 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
238 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
239 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
240 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
241 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
242 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
243 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
244 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
245 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
246 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
247 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
248 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
249 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
250 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
251 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
252 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
253 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
254 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
255 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
256 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
257 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
258 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
259 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
260 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
261 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
262 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
263 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.76
Metatranscriptomes 0.52
Isolates 22.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.96
Nodule 1.04
Rhizoplane 1.31
Rhizosphere 75.2
Stem 0
Stem Tuber 0
Unclassified 17.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10017437 3300001989 Bacteria 2591
2 JGI24737J22298_10020745 3300001990 Bacteria 2096
3 rootH1_10007279 3300003316 Bacteria 13019
4 rootH1_10059042 3300003316 Bacteria 2218
5 rootH2_10004985 3300003320 Bacteria 3320
6 rootH1_10032810 3300003323 Bacteria 3265
7 rootH1_10062157 3300003323 Bacteria 2939
8 JGI25160J50197_1043604 3300003354 Bacteria 1008
9 Ga0006562J51391_1078699 3300003578 Bacteria 1510
10 Ga0006562J51391_1100059 3300003578 Bacteria 1500
11 Ga0068853_100068557 3300005539 Bacteria 3084
12 Ga0068855_100658188 3300005563 Bacteria 1124
13 Ga0081455_10097159 3300005937 Bacteria 2374
14 Ga0075365_10169173 3300006038 Bacteria 1525
15 Ga0075368_10009208 3300006042 Bacteria 3548
16 Ga0075363_100009721 3300006048 Bacteria 4529
17 Ga0075367_10000645 3300006178 Bacteria 13408
18 Ga0075370_10083308 3300006353 Bacteria 1840
19 Ga0099826_10094082 3300006948 Bacteria 1825
20 Ga0105246_10015004 3300011119 Bacteria 4882
21 Ga0182008_10001186 3300014497 Bacteria 17968
22 Ga0182007_10006860 3300015262 Bacteria 4841
23 Ga0183367_1010 3300015688 Bacteria 416164
24 Ga0207426_1001609 3300025302 Bacteria 17914
25 Ga0207426_1005245 3300025302 Bacteria 5996
26 Ga0207647_10013563 3300025904 Bacteria 5643
27 Ga0207684_10492969 3300025910 Bacteria 1050
28 Ga0207639_10105139 3300026041 Bacteria 2290
29 Ga0207702_10358189 3300026078 Bacteria 1398
30 Ga0209813_10005519 3300027866 Bacteria 3073
31 Ga0307517_10041572 3300028786 Bacteria 4960
32 Ga0307515_10001737 3300028794 Bacteria 48507
33 Ga0307515_10212710 3300028794 Bacteria 1773
34 Ga0307511_10006815 3300030521 Bacteria 11517
35 Ga0307511_10071988 3300030521 Bacteria 2515
36 Ga0307512_10000948 3300030522 Bacteria 42647
37 Ga0307512_10013304 3300030522 Bacteria 7717
38 Ga0307513_10079883 3300031456 Bacteria 3376
39 Ga0307513_10102895 3300031456 Bacteria 2874
40 Ga0307509_10019859 3300031507 Bacteria 7644
41 Ga0307509_10093809 3300031507 Bacteria 3062
42 Ga0307508_10002372 3300031616 Bacteria 19934
43 Ga0307508_10014689 3300031616 Bacteria 7143
44 Ga0307508_10020871 3300031616 Bacteria 5950
45 Ga0307514_10066573 3300031649 Bacteria 2723
46 Ga0307514_10083125 3300031649 Bacteria 2361
47 Ga0307514_10095159 3300031649 Bacteria 2156
48 Ga0307514_10113870 3300031649 Bacteria 1907
49 Ga0307516_10002739 3300031730 Bacteria 23246
50 Ga0307518_10205050 3300031838 Bacteria 1304
51 Ga0307416_100489527 3300032002 Bacteria 1292
52 Ga0307507_10019163 3300033179 Bacteria 7722
53 Ga0307510_10012047 3300033180 Bacteria 10250
54 Ga0307510_10046662 3300033180 Bacteria 4654
55 Ga0307510_10127834 3300033180 Bacteria 2224
56 Ga0395900_0239066 3300037418 Bacteria 1823
57 Ga0395900_0314497 3300037418 Bacteria 1548
58 Ga0395898_0004475 3300037466 Bacteria 15278
59 Ga0395898_0081873 3300037466 Bacteria 3112
60 Ga0395905_0072769 3300037471 Bacteria 3223
61 Ga0395901_0183117 3300038443 Bacteria 2197
62 Ga0439436_0000576 3300041404 Bacteria 9712
63 Ga0451793_1602117 3300041452 Bacteria 1318
64 Ga0451853_1290206 3300041512 Bacteria 6723
65 Ga0451853_3612864 3300041512 Bacteria 4166
66 Ga0439433_0002019 3300041999 Bacteria 4262
67 Ga0439448_0002779 3300042005 Bacteria 4789
68 Ga0439432_010047 3300042006 Bacteria 3292
69 Ga0439449_0001558 3300042007 Bacteria 8979
70 Ga0439449_0025668 3300042007 Bacteria 2201
71 Ga0439455_0021084 3300042012 Bacteria 1550
72 Ga0439457_000258 3300042014 Bacteria 14467
73 Ga0439457_001451 3300042014 Bacteria 7126
74 Ga0439462_0003436 3300042015 Bacteria 3804
75 Ga0450894_000243 3300042131 Bacteria 9763
76 Ga0450898_000799 3300042134 Bacteria 3882
77 Ga0450899_000051 3300042135 Bacteria 9317
78 Ga0450900_006384 3300042136 Bacteria 1424
79 Ga0450908_001248 3300042184 Bacteria 4917
80 Ga0466969_0001779 3300044656 Bacteria 11486
81 Ga0466969_0008806 3300044656 Bacteria 5351
82 Ga0466969_0023901 3300044656 Bacteria 3145
83 Ga0466969_0058447 3300044656 Bacteria 1877
84 Ga0466972_0001209 3300044658 Bacteria 12428
85 Ga0466972_0008400 3300044658 Bacteria 5176
86 Ga0466972_0018732 3300044658 Bacteria 3461
87 Ga0466965_0000971 3300044683 Bacteria 11091
88 Ga0466965_0001031 3300044683 Bacteria 10785
89 Ga0466966_0001954 3300044684 Bacteria 13345
90 Ga0466966_0007004 3300044684 Bacteria 7466
91 Ga0466961_0002220 3300044693 Bacteria 12091
92 Ga0466961_0003755 3300044693 Bacteria 9497
93 Ga0466961_0005183 3300044693 Bacteria 8201
94 Ga0466961_0014671 3300044693 Bacteria 5033
95 Ga0466961_0095955 3300044693 Bacteria 1870
96 Ga0466961_0279231 3300044693 Bacteria 1022
97 Ga0466963_0000603 3300044694 Bacteria 17177
98 Ga0466963_0001021 3300044694 Bacteria 14505
99 Ga0466963_0003661 3300044694 Bacteria 8842
100 Ga0466964_0005282 3300044706 Bacteria 4790
101 Ga0466964_0005599 3300044706 Bacteria 4668
102 Ga0466964_0126912 3300044706 Bacteria 1157
103 Ga0466971_0000777 3300044719 Bacteria 12816
104 Ga0466971_0002682 3300044719 Bacteria 7519
105 Ga0466971_0030367 3300044719 Bacteria 2418
106 Ga0466971_0038043 3300044719 Bacteria 2158
107 Ga0466968_0024523 3300044735 Bacteria 2465
108 Ga0466970_0000651 3300044765 Bacteria 17075
109 Ga0466970_0003012 3300044765 Bacteria 8167
110 Ga0466970_0073631 3300044765 Bacteria 1838
111 Ga0466957_0001364 3300044842 Bacteria 12746
112 Ga0466957_0006330 3300044842 Bacteria 6674
113 Ga0466959_0012294 3300045049 Bacteria 6179
114 Ga0466959_0013697 3300045049 Bacteria 5886
115 Ga0466958_0001928 3300045836 Bacteria 10160
116 Ga0466958_0002936 3300045836 Bacteria 8718
117 Ga0466967_0009890 3300045976 Bacteria 7114
118 Ga0466967_0030763 3300045976 Bacteria 4508
119 Ga0466967_0045196 3300045976 Bacteria 3825
120 Ga0466967_0464817 3300045976 Bacteria 1238
121 Ga0495592_0036865 3300046454 Bacteria 3681
122 Ga0495603_0000418 3300046455 Bacteria 23548
123 Ga0495603_0000753 3300046455 Bacteria 18499
124 Ga0495603_0018330 3300046455 Bacteria 4234
125 Ga0495603_0027474 3300046455 Bacteria 3434
126 Ga0495603_0035365 3300046455 Bacteria 3000
127 Ga0495629_0006188 3300046459 Bacteria 8885
128 Ga0495629_0034355 3300046459 Bacteria 3585
129 Ga0495629_0061636 3300046459 Bacteria 2621
130 Ga0495638_0102010 3300046460 Bacteria 1715
131 Ga0495638_0189499 3300046460 Bacteria 1168
132 Ga0495641_0090237 3300046461 Bacteria 1369
133 Ga0495651_0000338 3300046462 Bacteria 36222
134 Ga0495651_0094772 3300046462 Bacteria 2233
135 Ga0495582_0148525 3300046473 Bacteria 1330
136 Ga0495605_0016029 3300046474 Bacteria 4064
137 Ga0495639_0022997 3300046475 Bacteria 2737
138 Ga0495662_0001635 3300046476 Bacteria 11158
139 Ga0495662_0112170 3300046476 Bacteria 1336
140 Ga0495664_0002451 3300046477 Bacteria 9979
141 Ga0495594_0013014 3300046499 Bacteria 4338
142 Ga0495594_0020222 3300046499 Bacteria 3545
143 Ga0495594_0021859 3300046499 Bacteria 3417
144 Ga0495596_0018877 3300046500 Bacteria 2838
145 Ga0495607_0054773 3300046501 Bacteria 2297
146 Ga0495583_0056770 3300046506 Bacteria 1763
147 Ga0495583_0081646 3300046506 Bacteria 1403
148 Ga0495608_0178987 3300046511 Bacteria 1342
149 Ga0495610_0031216 3300046512 Bacteria 2782
150 Ga0495616_0008137 3300046513 Bacteria 6236
151 Ga0495618_0007319 3300046514 Bacteria 6679
152 Ga0495618_0077984 3300046514 Bacteria 2111
153 Ga0495620_0002213 3300046515 Bacteria 11288
154 Ga0495620_0128242 3300046515 Bacteria 996
155 Ga0495628_0317320 3300046516 Bacteria 1150
156 Ga0495630_0009356 3300046517 Bacteria 7044
157 Ga0495631_0007610 3300046518 Bacteria 5504
158 Ga0495631_0132917 3300046518 Bacteria 1069
159 Ga0495632_0168387 3300046519 Bacteria 1007
160 Ga0495643_0021756 3300046522 Bacteria 3671
161 Ga0495643_0057527 3300046522 Bacteria 2072
162 Ga0495648_0022611 3300046524 Bacteria 4323
163 Ga0495648_0148787 3300046524 Bacteria 1223
164 Ga0495666_0079304 3300046526 Bacteria 1554
165 Ga0495654_0021134 3300046530 Bacteria 3388
166 Ga0495640_0014149 3300046533 Bacteria 6048
167 Ga0495586_0027902 3300046535 Bacteria 3021
168 Ga0495609_0046907 3300046538 Bacteria 1934
169 Ga0495597_0047303 3300046542 Bacteria 1904
170 Ga0495645_0030732 3300046543 Bacteria 3913
171 Ga0495645_0089818 3300046543 Bacteria 2197
172 Ga0495622_0012313 3300046557 Bacteria 3956
173 Ga0495622_0072292 3300046557 Bacteria 1591
174 Ga0495622_0073902 3300046557 Bacteria 1572
175 Ga0495633_0076896 3300046558 Bacteria 1554
176 Ga0495656_0083588 3300046615 Bacteria 1446
177 Ga0495634_0057290 3300046642 Bacteria 2601
178 Ga0495634_0149394 3300046642 Bacteria 1478
179 Ga0495611_0134006 3300046648 Bacteria 1156
180 Ga0495625_0035372 3300046660 Bacteria 3683
181 Ga0495625_0235071 3300046660 Bacteria 1195
182 Ga0495635_0000610 3300046663 Bacteria 23008
183 Ga0495635_0027677 3300046663 Bacteria 3942
184 Ga0495635_0219500 3300046663 Bacteria 1286
185 Ga0495661_0055760 3300046665 Bacteria 2367
186 Ga0495588_0006286 3300046674 Bacteria 5343
187 Ga0495657_0004567 3300046675 Bacteria 11059
188 Ga0495657_0015806 3300046675 Bacteria 5512
189 Ga0495657_0055722 3300046675 Bacteria 2636
190 Ga0495646_0006056 3300046680 Bacteria 7671
191 Ga0495658_0023680 3300046683 Bacteria 3262
192 Ga0495613_0000478 3300046689 Bacteria 34064
193 Ga0495613_0004254 3300046689 Bacteria 10722
194 Ga0495613_0033061 3300046689 Bacteria 3843
195 Ga0495624_0049135 3300046690 Bacteria 2675
196 Ga0495670_0158249 3300046691 Bacteria 1189
197 Ga0495671_0015097 3300046692 Bacteria 4146
198 Ga0495671_0185923 3300046692 Bacteria 1009
199 Ga0495649_0008855 3300046694 Bacteria 6026
200 Ga0495649_0029036 3300046694 Bacteria 3063
201 Ga0495589_0007545 3300046794 Bacteria 5699
202 Ga0495589_0009566 3300046794 Bacteria 5039
203 Ga0495589_0036054 3300046794 Bacteria 2479
204 Ga0495589_0075996 3300046794 Bacteria 1638
205 Ga0495589_0105936 3300046794 Bacteria 1358
206 Ga0495589_0109397 3300046794 Bacteria 1334
207 Ga0495600_0008156 3300046809 Bacteria 6429
208 Ga0495600_0082250 3300046809 Bacteria 2101
209 Ga0495600_0158742 3300046809 Bacteria 1462
210 Ga0495660_0109174 3300046810 Bacteria 1413
211 Ga0495581_0004842 3300047315 Bacteria 7785
212 Ga0495581_0016783 3300047315 Bacteria 4256
213 Ga0495604_0001356 3300047317 Bacteria 20036
214 Ga0495636_0010999 3300047318 Bacteria 3581
215 Ga0495636_0019427 3300047318 Bacteria 2732
216 Ga0495636_0026637 3300047318 Bacteria 2352
217 Ga0495674_0047414 3300047319 Bacteria 3811
218 Ga0495674_0234390 3300047319 Bacteria 1514
219 Ga0495672_0067754 3300047320 Bacteria 2032
220 Ga0495676_0000304 3300047321 Bacteria 39774
221 Ga0495676_0016625 3300047321 Bacteria 6519
222 Ga0495676_0027475 3300047321 Bacteria 4876
223 Ga0495676_0028165 3300047321 Bacteria 4804
224 Ga0495680_0028157 3300047322 Bacteria 4609
225 Ga0495683_0057119 3300047323 Bacteria 1940
226 Ga0495687_001822 3300047443 Bacteria 18731
227 Ga0495687_006349 3300047443 Bacteria 7270
228 Ga0495687_042334 3300047443 Bacteria 1990
229 Ga0495687_053493 3300047443 Bacteria 1699
230 Ga0495687_108377 3300047443 Bacteria 1026
231 Ga0495675_0026308 3300047444 Bacteria 3709
232 Ga0495679_062981 3300047446 Bacteria 1084
233 Ga0495685_008609 3300047447 Bacteria 3392
234 Ga0495685_013462 3300047447 Bacteria 2777
235 Ga0495685_019285 3300047447 Bacteria 2343
236 Ga0495685_079542 3300047447 Bacteria 1092
237 Ga0495681_0008150 3300047470 Bacteria 6595
238 Ga0495681_0029528 3300047470 Bacteria 2805
239 Ga0495686_0028047 3300047472 Bacteria 3669
240 Ga0495593_0001791 3300047673 Bacteria 12744
241 Ga0495593_0024644 3300047673 Bacteria 3332
242 Ga0495602_0068030 3300048088 Bacteria 3061
243 Ga0495602_0088764 3300048088 Bacteria 2573
244 Ga0495614_0000155 3300048089 Bacteria 24821
245 Ga0495614_0005674 3300048089 Bacteria 5625
246 Ga0495614_0060450 3300048089 Bacteria 1628
247 Ga0495626_0044649 3300048091 Bacteria 2072
248 Ga0496106_0464220 3300048909 Bacteria 1017
249 Ga0496108_0097126 3300048911 Bacteria 2510
250 Ga0496109_0009967 3300048912 Bacteria 8114
251 Ga0495682_0030270 3300049460 Bacteria 2003
252 Ga0501031_0129174 3300049568 Bacteria 1650
253 Ga0501032_0076824 3300049569 Bacteria 2223
254 Ga0501033_0006584 3300049570 Bacteria 9085
255 Ga0501033_0099589 3300049570 Bacteria 2122
256 Ga0501033_0109581 3300049570 Bacteria 2010
257 Ga0501034_0032038 3300049571 Bacteria 5340
258 Ga0501034_0065147 3300049571 Bacteria 3656
259 Ga0501036_0006974 3300049572 Bacteria 9193
260 Ga0501036_0029480 3300049572 Bacteria 4634
261 Ga0501036_0348434 3300049572 Bacteria 1237
262 Ga0501037_0012719 3300049573 Bacteria 6199
263 Ga0501037_0113083 3300049573 Bacteria 1955
264 Ga0501038_0000493 3300049574 Bacteria 34768
265 Ga0501038_0058976 3300049574 Bacteria 3289
266 Ga0501039_0161745 3300049575 Bacteria 1760
267 Ga0501042_0016605 3300049578 Bacteria 5057
268 Ga0501043_0013483 3300049579 Bacteria 6393
269 Ga0501043_0325363 3300049579 Bacteria 1171
270 Ga0501046_0006816 3300049580 Bacteria 10082
271 Ga0501047_0095635 3300049581 Bacteria 2849
272 Ga0501047_0167237 3300049581 Bacteria 2069
273 Ga0501048_0097178 3300049582 Bacteria 2077
274 Ga0501048_0349252 3300049582 Bacteria 1055
275 Ga0501080_0129542 3300049742 Bacteria 2335
276 Ga0501035_0018701 3300049822 Bacteria 6382
277 Ga0501035_0049432 3300049822 Bacteria 3768
278 Ga0501035_0147656 3300049822 Bacteria 2041
279 Ga0501035_0409845 3300049822 Bacteria 1126
280 Ga0501044_0021460 3300049823 Bacteria 6888
281 Ga0501044_0423290 3300049823 Bacteria 1241
282 nmdc:mga03n38_10601_c1 3300050490 Bacteria 3399
283 nmdc:mga06z11_366_c1 3300050494 Bacteria 17023
284 nmdc:mga04h51_3955_c1 3300050495 Bacteria 3648
285 Ga0495612_0042093 3300053078 Bacteria 1864
286 Ga0495595_0145099 3300053084 Bacteria 1166
287 Ga0500578_0105374 3300053086 Bacteria 1781
288 Ga0500644_0032541 3300053088 Bacteria 1667
289 Ga0500583_0104114 3300053092 Bacteria 1393
290 Ga0500640_032596 3300053095 Bacteria 2287
291 Ga0500641_0189475 3300053096 Bacteria 881
292 Ga0500553_119150 3300053101 Bacteria 1092
293 Ga0500572_010789 3300053111 Bacteria 2196
294 Ga0466962_0000270 3300061719 Bacteria 21922
295 Ga0466962_0000517 3300061719 Bacteria 16885
296 Ga0466962_0014678 3300061719 Bacteria 3775

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003578 Ga0006562J51391_1100059 Ga0006562J51391_11000592 213
2 3300006948 Ga0099826_10094082 Ga0099826_100940822 213
3 3300053084 Ga0495595_0145099 Ga0495595_0145099_71_805 217
4 3300044656 Ga0466969_0008806 Ga0466969_0008806_4311_5057 220
5 3300044658 Ga0466972_0001209 Ga0466972_0001209_3158_3904 220
6 3300044684 Ga0466966_0007004 Ga0466966_0007004_4316_5062 220
7 3300044693 Ga0466961_0005183 Ga0466961_0005183_3462_4208 220
8 3300044719 Ga0466971_0038043 Ga0466971_0038043_825_1571 220
9 3300044735 Ga0466968_0024523 Ga0466968_0024523_1254_2000 220
10 3300026078 Ga0207702_10358189 Ga0207702_103581892 222
11 3300042006 Ga0439432_010047 Ga0439432_010047_1956_2690 222
12 3300053088 Ga0500644_0032541 Ga0500644_0032541_534_1268 224
13 3300028786 Ga0307517_10041572 Ga0307517_100415722 225
14 3300028794 Ga0307515_10001737 Ga0307515_100017378 225
15 3300030521 Ga0307511_10071988 Ga0307511_100719883 225
16 3300031507 Ga0307509_10019859 Ga0307509_100198591 225
17 3300031507 Ga0307509_10093809 Ga0307509_100938092 225
18 3300031616 Ga0307508_10020871 Ga0307508_100208713 225
19 3300033179 Ga0307507_10019163 Ga0307507_100191637 225
20 3300033180 Ga0307510_10012047 Ga0307510_1001204710 225
21 3300037466 Ga0395898_0081873 Ga0395898_0081873_902_1636 225
22 3300041404 Ga0439436_0000576 Ga0439436_0000576_4544_5221 225
23 3300042014 Ga0439457_000258 Ga0439457_000258_5570_6247 225
24 3300046459 Ga0495629_0061636 Ga0495629_0061636_133_867 225
25 3300046462 Ga0495651_0000338 Ga0495651_0000338_28206_28940 225
26 3300046476 Ga0495662_0001635 Ga0495662_0001635_5652_6386 225
27 3300046477 Ga0495664_0002451 Ga0495664_0002451_5213_5947 225
28 3300046514 Ga0495618_0007319 Ga0495618_0007319_280_1014 225
29 3300046517 Ga0495630_0009356 Ga0495630_0009356_3716_4450 225
30 3300046535 Ga0495586_0027902 Ga0495586_0027902_1375_2109 225
31 3300046543 Ga0495645_0030732 Ga0495645_0030732_1968_2702 225
32 3300046557 Ga0495622_0073902 Ga0495622_0073902_223_957 225
33 3300046642 Ga0495634_0057290 Ga0495634_0057290_1753_2487 225
34 3300046663 Ga0495635_0000610 Ga0495635_0000610_5806_6540 225
35 3300046674 Ga0495588_0006286 Ga0495588_0006286_1119_1853 225
36 3300046675 Ga0495657_0004567 Ga0495657_0004567_6868_7602 225
37 3300046680 Ga0495646_0006056 Ga0495646_0006056_5042_5776 225
38 3300046683 Ga0495658_0023680 Ga0495658_0023680_938_1672 225
39 3300046689 Ga0495613_0004254 Ga0495613_0004254_3275_4009 225
40 3300046692 Ga0495671_0015097 Ga0495671_0015097_519_1253 225
41 3300046809 Ga0495600_0008156 Ga0495600_0008156_939_1673 225
42 3300047315 Ga0495581_0004842 Ga0495581_0004842_213_947 225
43 3300047317 Ga0495604_0001356 Ga0495604_0001356_2739_3473 225
44 3300047319 Ga0495674_0047414 Ga0495674_0047414_1444_2178 225
45 3300047321 Ga0495676_0016625 Ga0495676_0016625_116_850 225
46 3300047470 Ga0495681_0008150 Ga0495681_0008150_3223_3957 225
47 3300047673 Ga0495593_0001791 Ga0495593_0001791_7851_8585 225
48 3300048088 Ga0495602_0068030 Ga0495602_0068030_1103_1837 225
49 3300048089 Ga0495614_0005674 Ga0495614_0005674_4081_4815 225
50 3300053078 Ga0495612_0042093 Ga0495612_0042093_947_1681 225
51 3300053092 Ga0500583_0104114 Ga0500583_0104114_295_1029 225
52 3300053095 Ga0500640_032596 Ga0500640_032596_406_1140 225
53 3300053101 Ga0500553_119150 Ga0500553_119150_42_776 225
54 3300053111 Ga0500572_010789 Ga0500572_010789_1413_2147 225
55 3300041452 Ga0451793_1602117 Ga0451793_1602117_216_947 226
56 3300046794 Ga0495589_0109397 Ga0495589_0109397_496_1233 226
57 3300047447 Ga0495685_019285 Ga0495685_019285_834_1571 226
58 3300006038 Ga0075365_10169173 Ga0075365_101691732 227
59 3300028794 Ga0307515_10212710 Ga0307515_102127102 227
60 3300030521 Ga0307511_10006815 Ga0307511_100068153 227
61 3300031456 Ga0307513_10079883 Ga0307513_100798833 227
62 3300031649 Ga0307514_10083125 Ga0307514_100831252 227
63 3300031730 Ga0307516_10002739 Ga0307516_1000273915 227
64 3300031838 Ga0307518_10205050 Ga0307518_102050502 227
65 3300033180 Ga0307510_10127834 Ga0307510_101278342 227
66 3300047443 Ga0495687_006349 Ga0495687_006349_1936_2670 227
67 3300037418 Ga0395900_0239066 Ga0395900_0239066_1103_1792 229
68 3300042007 Ga0439449_0001558 Ga0439449_0001558_7418_8152 230
69 3300015688 Ga0183367_1010 Ga0183367_1010252 231
70 3300006048 Ga0075363_100009721 Ga0075363_1000097213 232
71 3300050490 nmdc:mga03n38_10601_c1 nmdc:mga03n38_10601_c1_894_1646 232
72 iso_pu_bacteria 2616644941 2616900720 234
73 iso_pu_bacteria 2867475112 2867477090 235
74 iso_pu_bacteria 2997451912 2997454207 235
75 iso_pu_bacteria 8054160619 8054167319 235
76 3300046455 Ga0495603_0000418 Ga0495603_0000418_11336_12076 236
77 3300046459 Ga0495629_0006188 Ga0495629_0006188_2440_3180 236
78 3300046689 Ga0495613_0000478 Ga0495613_0000478_5281_6021 236
79 3300047318 Ga0495636_0010999 Ga0495636_0010999_157_867 236
80 3300047321 Ga0495676_0000304 Ga0495676_0000304_11120_11860 236
81 3300047443 Ga0495687_001822 Ga0495687_001822_7488_8198 236
82 3300048089 Ga0495614_0000155 Ga0495614_0000155_4071_4811 236
83 3300049460 Ga0495682_0030270 Ga0495682_0030270_10_720 236
84 3300049570 Ga0501033_0006584 Ga0501033_0006584_2865_3575 236
85 iso_pu_bacteria 8025478263 8025483299 236
86 iso_pu_bacteria 8056667051 8056670217 236
87 iso_pu_bacteria 2554235005 2554259431 237
88 iso_pu_bacteria 2862290372 2862295939 237
89 iso_pu_bacteria 2862574272 2862583607 237
90 iso_pu_bacteria 2867369537 2867369970 237
91 3300046461 Ga0495641_0090237 Ga0495641_0090237_489_1226 238
92 3300046474 Ga0495605_0016029 Ga0495605_0016029_230_967 238
93 3300046500 Ga0495596_0018877 Ga0495596_0018877_1829_2566 238
94 3300046501 Ga0495607_0054773 Ga0495607_0054773_555_1292 238
95 3300046506 Ga0495583_0056770 Ga0495583_0056770_555_1292 238
96 3300046506 Ga0495583_0081646 Ga0495583_0081646_562_1299 238
97 3300046512 Ga0495610_0031216 Ga0495610_0031216_1646_2383 238
98 3300046513 Ga0495616_0008137 Ga0495616_0008137_3816_4553 238
99 3300046515 Ga0495620_0002213 Ga0495620_0002213_2831_3568 238
100 3300046515 Ga0495620_0128242 Ga0495620_0128242_230_967 238
101 3300046518 Ga0495631_0007610 Ga0495631_0007610_3837_4574 238
102 3300046519 Ga0495632_0168387 Ga0495632_0168387_73_810 238
103 3300046522 Ga0495643_0021756 Ga0495643_0021756_713_1450 238
104 3300046524 Ga0495648_0022611 Ga0495648_0022611_1649_2386 238
105 3300046524 Ga0495648_0148787 Ga0495648_0148787_95_832 238
106 3300046526 Ga0495666_0079304 Ga0495666_0079304_168_905 238
107 3300046530 Ga0495654_0021134 Ga0495654_0021134_1221_1958 238
108 3300046533 Ga0495640_0014149 Ga0495640_0014149_2618_3355 238
109 3300046538 Ga0495609_0046907 Ga0495609_0046907_29_766 238
110 3300046542 Ga0495597_0047303 Ga0495597_0047303_877_1614 238
111 3300046557 Ga0495622_0012313 Ga0495622_0012313_1297_2034 238
112 3300046558 Ga0495633_0076896 Ga0495633_0076896_369_1106 238
113 3300046642 Ga0495634_0149394 Ga0495634_0149394_227_964 238
114 3300046660 Ga0495625_0235071 Ga0495625_0235071_215_952 238
115 3300046665 Ga0495661_0055760 Ga0495661_0055760_339_1076 238
116 3300046692 Ga0495671_0185923 Ga0495671_0185923_97_834 238
117 3300046694 Ga0495649_0008855 Ga0495649_0008855_3526_4263 238
118 3300046694 Ga0495649_0029036 Ga0495649_0029036_1396_2133 238
119 3300046794 Ga0495589_0009566 Ga0495589_0009566_415_1152 238
120 3300046794 Ga0495589_0105936 Ga0495589_0105936_384_1121 238
121 3300046810 Ga0495660_0109174 Ga0495660_0109174_60_797 238
122 3300047315 Ga0495581_0016783 Ga0495581_0016783_1846_2583 238
123 3300047319 Ga0495674_0234390 Ga0495674_0234390_206_943 238
124 3300047320 Ga0495672_0067754 Ga0495672_0067754_1113_1850 238
125 3300047321 Ga0495676_0028165 Ga0495676_0028165_3183_3920 238
126 3300047443 Ga0495687_042334 Ga0495687_042334_877_1614 238
127 3300047443 Ga0495687_053493 Ga0495687_053493_346_1083 238
128 3300047443 Ga0495687_108377 Ga0495687_108377_31_768 238
129 3300047446 Ga0495679_062981 Ga0495679_062981_289_1026 238
130 3300047447 Ga0495685_008609 Ga0495685_008609_745_1482 238
131 3300047470 Ga0495681_0029528 Ga0495681_0029528_680_1417 238
132 3300048091 Ga0495626_0044649 Ga0495626_0044649_1071_1808 238
133 iso_pu_bacteria 2643221587 2643946440 238
134 iso_pu_bacteria 2643221670 2644389213 238
135 iso_pu_bacteria 2643221677 2644434244 238
136 iso_pu_bacteria 2802429296 2804843905 238
137 iso_pu_bacteria 2808606982 2811847084 238
138 iso_pu_bacteria 2918501144 2918502633 238
139 iso_pu_bacteria 8025413630 8025419185 238
140 3300003323 rootH1_10062157 rootH1_100621573 239
141 3300003354 JGI25160J50197_1043604 JGI25160J50197_10436041 239
142 3300005539 Ga0068853_100068557 Ga0068853_1000685571 239
143 3300025302 Ga0207426_1001609 Ga0207426_10016092 239
144 3300025302 Ga0207426_1005245 Ga0207426_10052454 239
145 3300026041 Ga0207639_10105139 Ga0207639_101051392 239
146 3300030522 Ga0307512_10013304 Ga0307512_100133045 239
147 3300031649 Ga0307514_10113870 Ga0307514_101138702 239
148 iso_pu_bacteria 2547132111 2547406650 239
149 iso_pu_bacteria 2582581312 2585296910 239
150 iso_pu_bacteria 2643221548 2643760074 239
151 iso_pu_bacteria 2643221682 2644460227 239
152 iso_pu_bacteria 2811994917 2812482257 239
153 iso_pu_bacteria 2912715099 2912722282 239
154 iso_pu_bacteria 2947224130 2947231700 239
155 iso_pu_bacteria 3006425503 3006430576 239
156 iso_pu_bacteria 3006486233 3006486587 239
157 iso_pu_bacteria 8033684223 8033691372 239
158 3300044656 Ga0466969_0001779 Ga0466969_0001779_8566_9321 240
159 3300044693 Ga0466961_0014671 Ga0466961_0014671_3098_3853 240
160 3300044719 Ga0466971_0030367 Ga0466971_0030367_1348_2103 240
161 3300045049 Ga0466959_0013697 Ga0466959_0013697_2635_3396 240
162 3300061719 Ga0466962_0014678 Ga0466962_0014678_927_1682 240
163 iso_pu_bacteria 2582581313 2585303672 240
164 iso_pu_bacteria 2582581314 2585315617 240
165 iso_pu_bacteria 2643221647 2644268145 240
166 iso_pu_bacteria 2643221678 2644443814 240
167 iso_pu_bacteria 2643221714 2644629162 240
168 iso_pu_bacteria 2784746768 2785367278 240
169 iso_pu_bacteria 2786546132 2786668323 240
170 iso_pu_bacteria 2808606359 2808847777 240
171 iso_pu_bacteria 2808606375 2808918517 240
172 iso_pu_bacteria 2811994879 2812360190 240
173 iso_pu_bacteria 2852635781 2852637838 240
174 iso_pu_bacteria 2862281513 2862289535 240
175 iso_pu_bacteria 2867428634 2867435819 240
176 iso_pu_bacteria 2877676314 2877683271 240
177 iso_pu_bacteria 2919468124 2919472077 240
178 iso_pu_bacteria 2946064051 2946065699 240
179 iso_pu_bacteria 2946072368 2946074042 240
180 iso_pu_bacteria 2954002825 2954010935 240
181 iso_pu_bacteria 2954380949 2954388517 240
182 iso_pu_bacteria 2954673503 2954674607 240
183 iso_pu_bacteria 2954682443 2954689526 240
184 iso_pu_bacteria 2954691527 2954699307 240
185 iso_pu_bacteria 2954701450 2954702912 240
186 iso_pu_bacteria 2954711539 2954718250 240
187 iso_pu_bacteria 2954721474 2954728220 240
188 iso_pu_bacteria 2954731030 2954733589 240
189 iso_pu_bacteria 2954740390 2954747114 240
190 iso_pu_bacteria 2954749733 2954752473 240
191 iso_pu_bacteria 2954759201 2954766227 240
192 3300031616 Ga0307508_10002372 Ga0307508_100023725 241
193 3300046455 Ga0495603_0027474 Ga0495603_0027474_1470_2195 241
194 3300046499 Ga0495594_0021859 Ga0495594_0021859_2071_2796 241
195 3300046518 Ga0495631_0132917 Ga0495631_0132917_334_1059 241
196 3300046660 Ga0495625_0035372 Ga0495625_0035372_2124_2849 241
197 3300046691 Ga0495670_0158249 Ga0495670_0158249_322_1047 241
198 3300046794 Ga0495589_0007545 Ga0495589_0007545_326_1051 241
199 3300046794 Ga0495589_0036054 Ga0495589_0036054_336_1061 241
200 3300047318 Ga0495636_0026637 Ga0495636_0026637_184_909 241
201 3300047323 Ga0495683_0057119 Ga0495683_0057119_643_1368 241
202 3300047447 Ga0495685_013462 Ga0495685_013462_848_1573 241
203 3300048089 Ga0495614_0060450 Ga0495614_0060450_311_1036 241
204 iso_pu_bacteria 2616644814 2616695760 241
205 iso_pu_bacteria 2784746763 2785345598 241
206 iso_pu_bacteria 2791355406 2793978493 241
207 iso_pu_bacteria 2862382967 2862390863 241
208 iso_pu_bacteria 2863404153 2863406854 241
209 iso_pu_bacteria 2867346516 2867346939 241
210 iso_pu_bacteria 2912723979 2912725983 241
211 iso_pu_bacteria 2935390628 2935394836 241
212 iso_pu_bacteria 2990059506 2990061375 241
213 iso_pu_bacteria 2990088156 2990089126 241
214 iso_pu_bacteria 2997600082 2997605552 241
215 iso_pu_bacteria 8008558824 8008561439 241
216 iso_pu_bacteria 8008574985 8008580627 241
217 iso_pu_bacteria 8023623736 8023628248 241
218 iso_pu_bacteria 8047893842 8047895005 241
219 iso_pu_bacteria 8048127548 8048129268 241
220 iso_pu_bacteria 8048356638 8048364044 241
221 iso_pu_bacteria 8048369669 8048372032 241
222 iso_pu_bacteria 8048379754 8048380966 241
223 iso_pu_bacteria 8048406513 8048412194 241
224 iso_pu_bacteria 8056829672 8056835575 241
225 3300025910 Ga0207684_10492969 Ga0207684_104929692 242
226 3300037418 Ga0395900_0314497 Ga0395900_0314497_310_1047 242
227 3300037466 Ga0395898_0004475 Ga0395898_0004475_8080_8817 242
228 3300037471 Ga0395905_0072769 Ga0395905_0072769_2089_2826 242
229 3300038443 Ga0395901_0183117 Ga0395901_0183117_492_1229 242
230 3300044656 Ga0466969_0023901 Ga0466969_0023901_717_1505 242
231 3300044658 Ga0466972_0008400 Ga0466972_0008400_1847_2635 242
232 3300044683 Ga0466965_0000971 Ga0466965_0000971_6905_7693 242
233 3300044683 Ga0466965_0001031 Ga0466965_0001031_6302_7045 242
234 3300044684 Ga0466966_0001954 Ga0466966_0001954_3220_4008 242
235 3300044693 Ga0466961_0002220 Ga0466961_0002220_4805_5593 242
236 3300044693 Ga0466961_0003755 Ga0466961_0003755_8136_8879 242
237 3300044693 Ga0466961_0095955 Ga0466961_0095955_141_875 242
238 3300044694 Ga0466963_0000603 Ga0466963_0000603_6739_7482 242
239 3300044694 Ga0466963_0001021 Ga0466963_0001021_8360_9148 242
240 3300044706 Ga0466964_0005282 Ga0466964_0005282_1832_2620 242
241 3300044706 Ga0466964_0005599 Ga0466964_0005599_1154_1897 242
242 3300044719 Ga0466971_0000777 Ga0466971_0000777_3220_4008 242
243 3300044719 Ga0466971_0002682 Ga0466971_0002682_3016_3759 242
244 3300044765 Ga0466970_0000651 Ga0466970_0000651_8414_9202 242
245 3300044765 Ga0466970_0003012 Ga0466970_0003012_3143_3886 242
246 3300044842 Ga0466957_0001364 Ga0466957_0001364_6603_7391 242
247 3300044842 Ga0466957_0006330 Ga0466957_0006330_3287_4030 242
248 3300045049 Ga0466959_0012294 Ga0466959_0012294_36_824 242
249 3300045836 Ga0466958_0001928 Ga0466958_0001928_6684_7472 242
250 3300045836 Ga0466958_0002936 Ga0466958_0002936_4242_4985 242
251 3300045976 Ga0466967_0009890 Ga0466967_0009890_2797_3540 242
252 3300045976 Ga0466967_0464817 Ga0466967_0464817_197_940 242
253 3300049568 Ga0501031_0129174 Ga0501031_0129174_815_1591 242
254 3300049572 Ga0501036_0006974 Ga0501036_0006974_865_1641 242
255 3300061719 Ga0466962_0000270 Ga0466962_0000270_3040_3828 242
256 3300061719 Ga0466962_0000517 Ga0466962_0000517_13127_13870 242
257 iso_pu_bacteria 2818991463 2819696512 242
258 iso_pu_bacteria 2862178590 2862186146 242
259 iso_pu_bacteria 2912757875 2912758997 242
260 iso_pu_bacteria 2966598605 2966604278 242
261 iso_pu_bacteria 3006393351 3006393422 242
262 iso_pu_bacteria 8025530807 8025530970 242
263 3300003578 Ga0006562J51391_1078699 Ga0006562J51391_10786992 243
264 3300049822 Ga0501035_0018701 Ga0501035_0018701_199_933 243
265 3300001989 JGI24739J22299_10017437 JGI24739J22299_100174372 244
266 3300001990 JGI24737J22298_10020745 JGI24737J22298_100207452 244
267 3300003316 rootH1_10007279 rootH1_1000727913 244
268 3300003316 rootH1_10059042 rootH1_100590424 244
269 3300003320 rootH2_10004985 rootH2_100049852 244
270 3300003323 rootH1_10032810 rootH1_100328102 244
271 3300005563 Ga0068855_100658188 Ga0068855_1006581882 244
272 3300005937 Ga0081455_10097159 Ga0081455_100971592 244
273 3300006042 Ga0075368_10009208 Ga0075368_100092082 244
274 3300006178 Ga0075367_10000645 Ga0075367_100006454 244
275 3300006353 Ga0075370_10083308 Ga0075370_100833082 244
276 3300011119 Ga0105246_10015004 Ga0105246_100150043 244
277 3300014497 Ga0182008_10001186 Ga0182008_100011868 244
278 3300015262 Ga0182007_10006860 Ga0182007_100068604 244
279 3300025904 Ga0207647_10013563 Ga0207647_100135634 244
280 3300027866 Ga0209813_10005519 Ga0209813_100055192 244
281 3300030522 Ga0307512_10000948 Ga0307512_1000094819 244
282 3300031456 Ga0307513_10102895 Ga0307513_101028952 244
283 3300031616 Ga0307508_10014689 Ga0307508_100146894 244
284 3300031649 Ga0307514_10066573 Ga0307514_100665733 244
285 3300031649 Ga0307514_10095159 Ga0307514_100951592 244
286 3300032002 Ga0307416_100489527 Ga0307416_1004895272 244
287 3300033180 Ga0307510_10046662 Ga0307510_100466622 244
288 3300041512 Ga0451853_1290206 Ga0451853_1290206_3788_4534 244
289 3300041512 Ga0451853_3612864 Ga0451853_3612864_2082_2816 244
290 3300041999 Ga0439433_0002019 Ga0439433_0002019_2112_2849 244
291 3300042005 Ga0439448_0002779 Ga0439448_0002779_3701_4438 244
292 3300042007 Ga0439449_0025668 Ga0439449_0025668_632_1369 244
293 3300042012 Ga0439455_0021084 Ga0439455_0021084_785_1522 244
294 3300042014 Ga0439457_001451 Ga0439457_001451_1698_2435 244
295 3300042015 Ga0439462_0003436 Ga0439462_0003436_1269_2006 244
296 3300042131 Ga0450894_000243 Ga0450894_000243_4191_4937 244
297 3300042134 Ga0450898_000799 Ga0450898_000799_2794_3540 244
298 3300042135 Ga0450899_000051 Ga0450899_000051_3172_3918 244
299 3300042136 Ga0450900_006384 Ga0450900_006384_32_790 244
300 3300042184 Ga0450908_001248 Ga0450908_001248_3531_4277 244
301 3300044656 Ga0466969_0058447 Ga0466969_0058447_745_1491 244
302 3300044658 Ga0466972_0018732 Ga0466972_0018732_2581_3327 244
303 3300044693 Ga0466961_0279231 Ga0466961_0279231_25_771 244
304 3300044694 Ga0466963_0003661 Ga0466963_0003661_726_1532 244
305 3300044706 Ga0466964_0126912 Ga0466964_0126912_299_1048 244
306 3300044765 Ga0466970_0073631 Ga0466970_0073631_280_1026 244
307 3300045976 Ga0466967_0030763 Ga0466967_0030763_962_1696 244
308 3300045976 Ga0466967_0045196 Ga0466967_0045196_830_1567 244
309 3300046454 Ga0495592_0036865 Ga0495592_0036865_1941_2678 244
310 3300046455 Ga0495603_0000753 Ga0495603_0000753_3222_3959 244
311 3300046455 Ga0495603_0018330 Ga0495603_0018330_894_1631 244
312 3300046455 Ga0495603_0035365 Ga0495603_0035365_557_1300 244
313 3300046459 Ga0495629_0034355 Ga0495629_0034355_1206_1943 244
314 3300046460 Ga0495638_0102010 Ga0495638_0102010_377_1114 244
315 3300046460 Ga0495638_0189499 Ga0495638_0189499_62_805 244
316 3300046462 Ga0495651_0094772 Ga0495651_0094772_1391_2128 244
317 3300046473 Ga0495582_0148525 Ga0495582_0148525_314_1051 244
318 3300046475 Ga0495639_0022997 Ga0495639_0022997_634_1371 244
319 3300046476 Ga0495662_0112170 Ga0495662_0112170_488_1225 244
320 3300046499 Ga0495594_0013014 Ga0495594_0013014_3254_3997 244
321 3300046499 Ga0495594_0020222 Ga0495594_0020222_2734_3471 244
322 3300046511 Ga0495608_0178987 Ga0495608_0178987_570_1307 244
323 3300046514 Ga0495618_0077984 Ga0495618_0077984_690_1427 244
324 3300046516 Ga0495628_0317320 Ga0495628_0317320_39_776 244
325 3300046522 Ga0495643_0057527 Ga0495643_0057527_1251_1988 244
326 3300046543 Ga0495645_0089818 Ga0495645_0089818_877_1614 244
327 3300046557 Ga0495622_0072292 Ga0495622_0072292_360_1103 244
328 3300046615 Ga0495656_0083588 Ga0495656_0083588_73_810 244
329 3300046648 Ga0495611_0134006 Ga0495611_0134006_317_1060 244
330 3300046663 Ga0495635_0027677 Ga0495635_0027677_414_1151 244
331 3300046663 Ga0495635_0219500 Ga0495635_0219500_86_823 244
332 3300046675 Ga0495657_0015806 Ga0495657_0015806_3165_3902 244
333 3300046675 Ga0495657_0055722 Ga0495657_0055722_1733_2470 244
334 3300046689 Ga0495613_0033061 Ga0495613_0033061_2381_3118 244
335 3300046690 Ga0495624_0049135 Ga0495624_0049135_162_899 244
336 3300046794 Ga0495589_0075996 Ga0495589_0075996_495_1238 244
337 3300046809 Ga0495600_0082250 Ga0495600_0082250_224_961 244
338 3300046809 Ga0495600_0158742 Ga0495600_0158742_675_1412 244
339 3300047318 Ga0495636_0019427 Ga0495636_0019427_400_1137 244
340 3300047321 Ga0495676_0027475 Ga0495676_0027475_2842_3585 244
341 3300047322 Ga0495680_0028157 Ga0495680_0028157_3646_4383 244
342 3300047444 Ga0495675_0026308 Ga0495675_0026308_25_762 244
343 3300047447 Ga0495685_079542 Ga0495685_079542_93_830 244
344 3300047472 Ga0495686_0028047 Ga0495686_0028047_2698_3432 244
345 3300047673 Ga0495593_0024644 Ga0495593_0024644_20_757 244
346 3300048088 Ga0495602_0088764 Ga0495602_0088764_1176_1913 244
347 3300048909 Ga0496106_0464220 Ga0496106_0464220_169_906 244
348 3300048911 Ga0496108_0097126 Ga0496108_0097126_1590_2327 244
349 3300048912 Ga0496109_0009967 Ga0496109_0009967_7073_7810 244
350 3300049569 Ga0501032_0076824 Ga0501032_0076824_860_1624 244
351 3300049570 Ga0501033_0099589 Ga0501033_0099589_492_1256 244
352 3300049570 Ga0501033_0109581 Ga0501033_0109581_1228_1980 244
353 3300049571 Ga0501034_0032038 Ga0501034_0032038_1157_1912 244
354 3300049571 Ga0501034_0065147 Ga0501034_0065147_37_780 244
355 3300049572 Ga0501036_0029480 Ga0501036_0029480_3863_4615 244
356 3300049572 Ga0501036_0348434 Ga0501036_0348434_255_989 244
357 3300049573 Ga0501037_0012719 Ga0501037_0012719_4583_5347 244
358 3300049573 Ga0501037_0113083 Ga0501037_0113083_169_903 244
359 3300049574 Ga0501038_0000493 Ga0501038_0000493_27912_28655 244
360 3300049574 Ga0501038_0058976 Ga0501038_0058976_852_1616 244
361 3300049575 Ga0501039_0161745 Ga0501039_0161745_446_1210 244
362 3300049578 Ga0501042_0016605 Ga0501042_0016605_3597_4361 244
363 3300049579 Ga0501043_0013483 Ga0501043_0013483_868_1632 244
364 3300049579 Ga0501043_0325363 Ga0501043_0325363_143_886 244
365 3300049580 Ga0501046_0006816 Ga0501046_0006816_2496_3260 244
366 3300049581 Ga0501047_0095635 Ga0501047_0095635_1367_2110 244
367 3300049581 Ga0501047_0167237 Ga0501047_0167237_1192_1926 244
368 3300049582 Ga0501048_0097178 Ga0501048_0097178_492_1256 244
369 3300049582 Ga0501048_0349252 Ga0501048_0349252_183_917 244
370 3300049742 Ga0501080_0129542 Ga0501080_0129542_212_946 244
371 3300049822 Ga0501035_0049432 Ga0501035_0049432_681_1424 244
372 3300049822 Ga0501035_0147656 Ga0501035_0147656_677_1441 244
373 3300049822 Ga0501035_0409845 Ga0501035_0409845_229_963 244
374 3300049823 Ga0501044_0021460 Ga0501044_0021460_2853_3590 244
375 3300049823 Ga0501044_0423290 Ga0501044_0423290_344_1087 244
376 3300050494 nmdc:mga06z11_366_c1 nmdc:mga06z11_366_c1_3719_4453 244
377 3300050495 nmdc:mga04h51_3955_c1 nmdc:mga04h51_3955_c1_1429_2163 244
378 3300053086 Ga0500578_0105374 Ga0500578_0105374_19_753 244
379 3300053096 Ga0500641_0189475 Ga0500641_0189475_14_748 244
380 iso_pu_bacteria 2784132148 2784586859 244
381 iso_pu_bacteria 2808606448 2809230426 244
382 iso_pu_bacteria 2873151551 2873157572 244
383 iso_pu_bacteria 3006493962 3006499863 244

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07729

FCD

FCD domain

134

255

0.93

PF00392

GntR

Bacterial regulatory proteins, gntR family

47

111

0.9

PF02082

Rrf2

Iron-dependent Transcriptional regulator

49

174

0.9

PF13545

HTH_Crp_2

Crp-like helix-turn-helix domain

54

115

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5d4r-assembly1.cif.gz_A crystal structure of arar(dbd) in complex with operator ore1 0.9522 25 90
4h0e-assembly1.cif.gz_A crystal structure of mutant orr3 in complex with ntd of arar 0.9479 25 90
3eet-assembly2.cif.gz_B-3 crystal structure of putative gntr-family transcriptional regulator 0.9211 25 77
3edp-assembly1.cif.gz_B the crystal structure of the protein lin2111 (functionally unknown) from listeria innocua clip11262 0.9175 25 93
4u0y-assembly1.cif.gz_A crystal structure of the dna-binding domains of yvoa in complex with palindromic operator dna 0.9016 26 90
ID Description Score Start End Superfamily
af_P31460_2_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9603 24 92 1.10.10.10
5d4rA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9522 25 90 1.10.10.10
5d4sA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9452 25 90 1.10.10.10
af_P45544_5_80_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9415 25 94 1.10.10.10
1hw2B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9306 25 91 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3Q9BU72-F1-model_v4 FadR family transcriptional regulator 0.9788 1 243 GO:0003677
GO:0003700
AF-A0A3Q9BU72-F1-model_v4 FadR family transcriptional regulator 0.9748 1 243 GO:0003677
GO:0003700
AF-A0A132T7E5-F1-model_v4 HTH gntR-type domain-containing protein 0.912 6 243 GO:0003677
GO:0003700
AF-A0A4R4WPM6-F1-model_v4 FadR family transcriptional regulator 0.9097 15 243 GO:0003677
GO:0003700
AF-A0A6B3IF87-F1-model_v4 FadR family transcriptional regulator 0.9039 13 176 GO:0003677
GO:0003700

Feature Viewer

pLDDT pTM Quality
91.08 0.88 High
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Predicted Structure (AlphaFold2)

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