F430706

General Info

Members Datasets Scaffolds Average Seq Length
387 243 324 389

Family's Representative Sequence

Representative Sequence 3300002737|JGI25162J39368_1002739|JGI25162J39368_10027392
Length 417
Sequence MPRGMVLRWVTSLACDVSEVQSSQDNTYMALLPQIRIPATYLRGGTSKGVFFRLQDLPEAAQVPGAARDALLQRVIGSPDPYGKQIDGMGGATSSTSKTVIVSRSSRPDHDVDYLFGQVTIDKAFVDWSGNCGNLSAAVGPFAIAGGLIDPARLPRDGIATVRIWQANIGKTIIAHVPMTDGAVQETGDFELDGVTFPAAEVQLEFMDPAAEEDGAGGAMFPTGNLVDDLEVPGVGTLKATMINAGIPTIFVEASAIGYTGTELQDAINSDAKALAMFETIRAHGALRMGLISSLDEIATRQHTPKVAFVAKPADYVASSGKPVKAGDVDLLVRAMSMGKLHHAMMGTAAVAIIPGTLVNMAAGGGERHAVRFGHPSGTLRVGAEATLVDGTWTVTKAVMSRSARVLMEGWVRVPAG

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
4 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
5 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
6 2513237151 Burkholderia sp. WSM2230 Isolate Nodule
7 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
8 2519103095 Burkholderia sp. KJ006 Isolate Nodule
9 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
10 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
11 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
12 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
13 2643221559 Lysobacter sp. Root559 Isolate Unclassified
14 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
15 2643221573 Lysobacter sp. Root604 Isolate Unclassified
16 2643221586 Lysobacter sp. Root667 Isolate Unclassified
17 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
18 2643221612 Lysobacter sp. Root76 Isolate Unclassified
19 2643221720 Lysobacter sp. Root916 Isolate Unclassified
20 2643221727 Lysobacter sp. Root96 Isolate Unclassified
21 2643221728 Lysobacter sp. Root983 Isolate Unclassified
22 2687453130 Dyella thiooxydans ATSB10 Isolate Unclassified
23 2738543013 Variovorax sp. BT01 Isolate Unclassified
24 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
25 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
26 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
27 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
28 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
29 2818991446 Variovorax sp. 1180 Isolate Unclassified
30 2818991450 Burkholderia sp. 604 Isolate Unclassified
31 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
32 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
33 2884411467 Dyella sp. AD56 Isolate Rhizosphere
34 2885266251 Ralstonia sp. SET104 Isolate Nodule
35 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
36 2899924645 Variovorax sp. 369 Isolate Unclassified
37 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
38 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
39 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
40 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
41 2928037797 Variovorax sp. 1126 Isolate Unclassified
42 2928044640 Variovorax sp. 1128 Isolate Unclassified
43 2928051484 Variovorax sp. 1133 Isolate Unclassified
44 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
45 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
46 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
47 2928503688 Paraburkholderia terricola 1263 Isolate Rhizosphere
48 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
49 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
50 2941479691
51 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
52 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
53 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
54 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
55 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
56 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
57 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
58 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
59 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
60 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
61 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
62 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
63 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
64 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
65 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
66 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
67 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
68 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
69 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
70 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
71 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
72 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
73 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
74 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
75 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
76 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
77 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
78 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
79 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
80 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
81 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
82 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
83 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
84 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
85 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
86 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
87 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
88 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
89 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
90 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
91 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
92 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
93 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
99 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
100 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
102 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
103 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
106 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
107 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
113 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
115 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
129 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
130 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
131 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
132 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
133 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
134 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
135 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
136 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
137 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
141 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
142 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
143 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
144 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
145 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
146 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
147 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
148 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
149 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
150 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
151 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
152 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
153 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
154 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
155 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
156 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
157 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
158 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
159 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
160 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
161 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
162 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
163 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
164 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
165 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
166 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
167 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
168 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
169 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
170 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
171 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
172 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
173 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
174 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
175 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
176 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
177 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
178 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
179 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
180 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
181 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
182 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
183 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
184 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
185 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
186 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
187 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
188 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
189 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
190 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
191 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
192 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
193 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
194 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
195 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
196 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
197 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
198 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
199 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
200 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
201 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
202 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
203 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
204 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
205 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
206 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
207 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
208 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
209 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
210 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
211 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
212 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
213 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
214 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
215 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
216 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
217 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
218 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
219 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
220 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
221 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
222 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
223 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
224 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
225 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
226 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
227 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
228 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
229 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
230 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
231 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
232 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
233 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
234 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
235 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
236 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
237 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
238 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
239 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
240 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere
241 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
242 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere
243 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.46
Metatranscriptomes 0.26
Isolates 16.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.51
Nodule 3.1
Rhizoplane 1.03
Rhizosphere 54.26
Stem 0
Stem Tuber 0
Unclassified 18.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10008066 3300002067 Bacteria 3418
2 JGI25156J39149_1002133 3300002705 Bacteria 7463
3 JGI25156J39149_1002528 3300002705 Bacteria 6510
4 JGI25162J39368_1001049 3300002737 Bacteria 17001
5 JGI25162J39368_1001107 3300002737 Bacteria 16309
6 JGI25162J39368_1002739 3300002737 Bacteria 6323
7 JGI25154J39366_1001012 3300002738 Bacteria 11293
8 JGI25157J39369_1000385 3300002741 Bacteria 30422
9 JGI25163J39215_1000818 3300002771 Bacteria 7475
10 JGI25164J39214_1000321 3300002772 Bacteria 31033
11 JGI25164J39214_1000631 3300002772 Bacteria 14774
12 JGI25165J46597_1000374 3300003214 Bacteria 49474
13 JGI25165J46597_1002211 3300003214 Bacteria 6843
14 JGI25165J46597_1003465 3300003214 Bacteria 3914
15 rootH1_10007150 3300003323 Bacteria 4123
16 Ga0055538_1000677 3300003751 Bacteria 10555
17 Ga0055533_1000256 3300003756 Bacteria 31945
18 Ga0055533_1001286 3300003756 Bacteria 6830
19 Ga0055532_1000007 3300003758 Bacteria 429810
20 Ga0055527_1000007 3300003760 Bacteria 429810
21 Ga0055535_1000005 3300003761 Bacteria 429810
22 Ga0055535_1000310 3300003761 Bacteria 49471
23 Ga0055535_1001210 3300003761 Bacteria 14640
24 Ga0055542_1000008 3300003762 Bacteria 429810
25 Ga0055542_1000129 3300003762 Bacteria 99542
26 Ga0055542_1000416 3300003762 Bacteria 41534
27 Ga0055542_1001060 3300003762 Bacteria 17001
28 Ga0055542_1001691 3300003762 Bacteria 9699
29 Ga0055529_1000005 3300003763 Bacteria 429810
30 Ga0055529_1000364 3300003763 Bacteria 49472
31 Ga0055526_1024238 3300003771 Bacteria 1993
32 Ga0055536_1000976 3300003781 Bacteria 18191
33 Ga0055536_1001040 3300003781 Bacteria 17571
34 Ga0055534_1001764 3300003784 Bacteria 8154
35 Ga0055540_1000295 3300003792 Bacteria 44343
36 Ga0055531_10007078 3300003794 Bacteria 6202
37 Ga0055531_10007844 3300003794 Bacteria 5743
38 Ga0055531_10008766 3300003794 Bacteria 5277
39 Ga0065165_1003770 3300005262 Bacteria 10154
40 Ga0070658_10105652 3300005327 Bacteria 2329
41 Ga0070689_100066945 3300005340 Bacteria 2799
42 Ga0070685_10001750 3300005466 Bacteria 11365
43 Ga0070665_100092828 3300005548 Bacteria 3023
44 Ga0068855_100073140 3300005563 Bacteria 3983
45 Ga0075364_10066483 3300006051 Bacteria 2368
46 Ga0075431_100102271 3300006847 Bacteria 2957
47 Ga0105251_10001630 3300009011 Bacteria 19008
48 Ga0105240_10028638 3300009093 Bacteria 7271
49 Ga0105237_10009684 3300009545 Bacteria 10309
50 Ga0157370_10005100 3300013104 Bacteria 14816
51 Ga0157370_10015134 3300013104 Bacteria 7857
52 Ga0157370_10148770 3300013104 Bacteria 2180
53 Ga0157369_10007459 3300013105 Bacteria 12596
54 Ga0182008_10026045 3300014497 Bacteria 2967
55 Ga0182006_1011747 3300015261 Bacteria 3843
56 Ga0182007_10002652 3300015262 Bacteria 8784
57 Ga0183361_10042 3300016635 Bacteria 11537
58 Ga0224712_10009394 3300022467 Bacteria 2946
59 Ga0209760_100501 3300025207 Bacteria 8265
60 Ga0209784_100187 3300025224 Bacteria 49485
61 Ga0209674_100020 3300025226 Bacteria 672397
62 Ga0209674_100314 3300025226 Bacteria 31646
63 Ga0209672_100013 3300025228 Bacteria 740693
64 Ga0209672_100387 3300025228 Bacteria 26710
65 Ga0209672_102361 3300025228 Bacteria 4745
66 Ga0209147_100013 3300025229 Bacteria 660057
67 Ga0209563_101294 3300025230 Bacteria 6836
68 Ga0207427_100013 3300025231 Bacteria 581419
69 Ga0207427_100112 3300025231 Bacteria 109224
70 Ga0207427_101101 3300025231 Bacteria 10962
71 Ga0209437_100015 3300025233 Bacteria 713457
72 Ga0209437_100020 3300025233 Bacteria 656374
73 Ga0209437_100362 3300025233 Bacteria 50377
74 Ga0209258_100016 3300025242 Bacteria 668622
75 Ga0209258_100043 3300025242 Bacteria 380685
76 Ga0209258_100240 3300025242 Bacteria 100990
77 Ga0209646_1000027 3300025246 Bacteria 395141
78 Ga0209646_1000583 3300025246 Bacteria 15089
79 Ga0209026_1000084 3300025250 Bacteria 186997
80 Ga0209026_1000092 3300025250 Bacteria 170960
81 Ga0209026_1002600 3300025250 Bacteria 6622
82 Ga0209677_104093 3300025253 Bacteria 4374
83 Ga0209148_1000005 3300025254 Bacteria 1806504
84 Ga0209148_1000010 3300025254 Bacteria 1265567
85 Ga0209148_1000019 3300025254 Bacteria 748518
86 Ga0209148_1000020 3300025254 Bacteria 740693
87 Ga0209148_1000033 3300025254 Bacteria 555508
88 Ga0209759_1000010 3300025256 Bacteria 430463
89 Ga0209759_1000203 3300025256 Bacteria 94040
90 Ga0209759_1000437 3300025256 Bacteria 49479
91 Ga0209759_1000618 3300025256 Bacteria 33996
92 Ga0209759_1001875 3300025256 Bacteria 10430
93 Ga0209759_1007135 3300025256 Bacteria 3643
94 Ga0209233_1000009 3300025261 Bacteria 1265567
95 Ga0209233_1000020 3300025261 Bacteria 798224
96 Ga0209233_1000055 3300025261 Bacteria 439422
97 Ga0209455_1000017 3300025272 Bacteria 740693
98 Ga0209455_1000020 3300025272 Bacteria 702259
99 Ga0209673_1004226 3300025273 Bacteria 7818
100 Ga0209130_1008360 3300025284 Bacteria 3065
101 Ga0209130_1011043 3300025284 Bacteria 2440
102 Ga0209675_1001992 3300025291 Bacteria 10962
103 Ga0209675_1012627 3300025291 Bacteria 2705
104 Ga0209676_1000290 3300025292 Bacteria 103000
105 Ga0209676_1000352 3300025292 Bacteria 87022
106 Ga0209676_1000854 3300025292 Bacteria 39262
107 Ga0209676_1003816 3300025292 Bacteria 8889
108 Ga0209676_1006209 3300025292 Bacteria 5969
109 Ga0209676_1011203 3300025292 Bacteria 3642
110 Ga0209025_1000562 3300025294 Bacteria 68180
111 Ga0209050_1000932 3300025298 Bacteria 38288
112 Ga0209050_1006934 3300025298 Bacteria 6534
113 Ga0209256_1000457 3300025299 Bacteria 61666
114 Ga0209256_1003363 3300025299 Bacteria 11322
115 Ga0209256_1006455 3300025299 Bacteria 6193
116 Ga0209256_1008355 3300025299 Bacteria 4822
117 Ga0209051_1000141 3300025303 Bacteria 135837
118 Ga0209051_1013564 3300025303 Bacteria 3869
119 Ga0209257_1000065 3300025304 Bacteria 353604
120 Ga0209257_1000241 3300025304 Bacteria 127802
121 Ga0209257_1000529 3300025304 Bacteria 66275
122 Ga0209257_1000867 3300025304 Bacteria 42999
123 Ga0209257_1003596 3300025304 Bacteria 13100
124 Ga0209257_1011187 3300025304 Bacteria 4365
125 Ga0207656_10002034 3300025321 Bacteria 6752
126 Ga0207713_1003604 3300025735 Bacteria 10439
127 Ga0207647_10014469 3300025904 Bacteria 5439
128 Ga0207647_10017042 3300025904 Bacteria 4945
129 Ga0207647_10050497 3300025904 Bacteria 2574
130 Ga0207705_10000864 3300025909 Bacteria 24824
131 Ga0207695_10002672 3300025913 Bacteria 26047
132 Ga0207671_10006598 3300025914 Bacteria 10301
133 Ga0207706_10168170 3300025933 Bacteria 1927
134 Ga0207670_10017780 3300025936 Bacteria 4306
135 Ga0207667_10003189 3300025949 Bacteria 20261
136 Ga0207667_10209458 3300025949 Bacteria 1998
137 Ga0207674_10321674 3300026116 Bacteria 1496
138 Ga0209371_1006124 3300027312 Bacteria 4556
139 Ga0265338_10000058 3300028800 Bacteria 198555
140 Ga0268256_1006141 3300030500 Bacteria 4529
141 Ga0316182_1154484 3300030745 Bacteria 2646
142 Ga0265340_10014186 3300031247 Bacteria 4171
143 Ga0316579_10003915 3300031691 Bacteria 5867
144 Ga0316576_10047565 3300031727 Bacteria 3109
145 Ga0316577_10002649 3300031733 Bacteria 8888
146 Ga0307412_10000002 3300031911 Bacteria 743446
147 Ga0307412_10145560 3300031911 Bacteria 1741
148 Ga0373937_0216655 3300036401 Bacteria 1802
149 Ga0316584_0202335 3300036712 Bacteria 1465
150 Ga0395900_0041846 3300037418 Bacteria 4722
151 Ga0395900_0048158 3300037418 Bacteria 4390
152 Ga0395898_0009193 3300037466 Bacteria 10400
153 Ga0395898_0019233 3300037466 Bacteria 6953
154 Ga0395898_0143673 3300037466 Bacteria 2284
155 Ga0395905_0000029 3300037471 Bacteria 293016
156 Ga0395905_0146134 3300037471 Bacteria 2224
157 Ga0395901_0000012 3300038443 Bacteria 381361
158 Ga0395901_0005756 3300038443 Bacteria 12555
159 Ga0237819_00020 3300038705 Bacteria 55328
160 Ga0237816_00170 3300039145 Bacteria 5192
161 Ga0439432_005978 3300042006 Bacteria 4367
162 Ga0439440_0009604 3300042993 Bacteria 2007
163 Ga0466969_0000168 3300044656 Bacteria 35318
164 Ga0466969_0014352 3300044656 Bacteria 4163
165 Ga0466972_0000446 3300044658 Bacteria 21243
166 Ga0466972_0041060 3300044658 Bacteria 2252
167 Ga0466973_0127146 3300044659 Bacteria 2081
168 Ga0466977_0065555 3300044666 Bacteria 2385
169 Ga0466982_0000009 3300044672 Bacteria 221166
170 Ga0466965_0016044 3300044683 Bacteria 3559
171 Ga0466965_0027077 3300044683 Bacteria 2780
172 Ga0466966_0000060 3300044684 Bacteria 79613
173 Ga0466961_0000203 3300044693 Bacteria 39895
174 Ga0466961_0002279 3300044693 Bacteria 11909
175 Ga0466961_0053179 3300044693 Bacteria 2584
176 Ga0466963_0002445 3300044694 Bacteria 10386
177 Ga0466963_0010498 3300044694 Bacteria 5608
178 Ga0466971_0001788 3300044719 Bacteria 9116
179 Ga0466971_0010790 3300044719 Bacteria 3996
180 Ga0466968_0014349 3300044735 Bacteria 3130
181 Ga0466970_0026532 3300044765 Bacteria 3036
182 Ga0466959_0012137 3300045049 Bacteria 6217
183 Ga0466959_0019723 3300045049 Bacteria 4960
184 Ga0466959_0030274 3300045049 Bacteria 4008
185 Ga0466958_0000708 3300045836 Bacteria 14553
186 Ga0466958_0030973 3300045836 Bacteria 3179
187 Ga0466958_0051487 3300045836 Bacteria 2493
188 Ga0495592_0015244 3300046454 Bacteria 5835
189 Ga0495591_002018 3300046458 Bacteria 11808
190 Ga0495629_0000299 3300046459 Bacteria 42416
191 Ga0495629_0000736 3300046459 Bacteria 26536
192 Ga0495629_0009471 3300046459 Bacteria 7124
193 Ga0495629_0017395 3300046459 Bacteria 5152
194 Ga0495629_0131598 3300046459 Bacteria 1742
195 Ga0495638_0000243 3300046460 Bacteria 74582
196 Ga0495638_0000396 3300046460 Bacteria 53708
197 Ga0495638_0001634 3300046460 Bacteria 19940
198 Ga0495653_0020172 3300046463 Bacteria 5402
199 Ga0495653_0085997 3300046463 Bacteria 2311
200 Ga0495650_0000011 3300046471 Bacteria 615329
201 Ga0495650_0000450 3300046471 Bacteria 65387
202 Ga0495650_0002827 3300046471 Bacteria 13311
203 Ga0495650_0002876 3300046471 Bacteria 13120
204 Ga0495650_0010375 3300046471 Bacteria 5202
205 Ga0495650_0020627 3300046471 Bacteria 3209
206 Ga0495580_0006994 3300046472 Bacteria 9093
207 Ga0495580_0008476 3300046472 Bacteria 8177
208 Ga0495580_0012737 3300046472 Bacteria 6446
209 Ga0495580_0040624 3300046472 Bacteria 3321
210 Ga0495605_0006901 3300046474 Bacteria 6485
211 Ga0495605_0010024 3300046474 Bacteria 5309
212 Ga0495605_0023204 3300046474 Bacteria 3266
213 Ga0495662_0049686 3300046476 Bacteria 2024
214 Ga0495584_0006486 3300046491 Bacteria 6117
215 Ga0495584_0009787 3300046491 Bacteria 4931
216 Ga0495594_0049859 3300046499 Bacteria 2302
217 Ga0495583_0009307 3300046506 Bacteria 5882
218 Ga0495606_0001807 3300046507 Bacteria 27215
219 Ga0495606_0080895 3300046507 Bacteria 2020
220 Ga0495608_0010220 3300046511 Bacteria 6551
221 Ga0495620_0018334 3300046515 Bacteria 3468
222 Ga0495628_0004009 3300046516 Bacteria 13118
223 Ga0495630_0061838 3300046517 Bacteria 2812
224 Ga0495630_0142200 3300046517 Bacteria 1825
225 Ga0495631_0023232 3300046518 Bacteria 2876
226 Ga0495632_0035024 3300046519 Bacteria 2565
227 Ga0495648_0027131 3300046524 Bacteria 3840
228 Ga0495666_0006679 3300046526 Bacteria 5801
229 Ga0495666_0013535 3300046526 Bacteria 4066
230 Ga0495666_0025719 3300046526 Bacteria 2906
231 Ga0495665_0012515 3300046531 Bacteria 4591
232 Ga0495665_0055004 3300046531 Bacteria 2102
233 Ga0495640_0009723 3300046533 Bacteria 7472
234 Ga0495640_0039277 3300046533 Bacteria 3322
235 Ga0495587_0039738 3300046536 Bacteria 2814
236 Ga0495609_0037616 3300046538 Bacteria 2183
237 Ga0495622_0000187 3300046557 Bacteria 49740
238 Ga0495634_0021705 3300046642 Bacteria 4532
239 Ga0495634_0064310 3300046642 Bacteria 2432
240 Ga0495611_0072457 3300046648 Bacteria 1576
241 Ga0495635_0067948 3300046663 Bacteria 2444
242 Ga0495661_0004709 3300046665 Bacteria 9798
243 Ga0495661_0024953 3300046665 Bacteria 3868
244 Ga0495588_0086722 3300046674 Bacteria 1637
245 Ga0495599_0044524 3300046678 Bacteria 2783
246 Ga0495623_0023269 3300046679 Bacteria 3998
247 Ga0495623_0066683 3300046679 Bacteria 2248
248 Ga0495646_0009905 3300046680 Bacteria 6055
249 Ga0495646_0014219 3300046680 Bacteria 5060
250 Ga0495646_0031757 3300046680 Bacteria 3289
251 Ga0495669_0037737 3300046684 Bacteria 2139
252 Ga0495613_0034230 3300046689 Bacteria 3774
253 Ga0495624_0005099 3300046690 Bacteria 9495
254 Ga0495624_0012941 3300046690 Bacteria 5691
255 Ga0495624_0015231 3300046690 Bacteria 5200
256 Ga0495649_0003549 3300046694 Bacteria 10482
257 Ga0495589_0007525 3300046794 Bacteria 5705
258 Ga0495589_0012488 3300046794 Bacteria 4398
259 Ga0495589_0023348 3300046794 Bacteria 3153
260 Ga0495589_0029412 3300046794 Bacteria 2770
261 Ga0495589_0044844 3300046794 Bacteria 2197
262 Ga0495600_0010569 3300046809 Bacteria 5731
263 Ga0495660_0031569 3300046810 Bacteria 2978
264 Ga0495660_0061466 3300046810 Bacteria 2015
265 Ga0495581_0004765 3300047315 Bacteria 7832
266 Ga0495604_0022753 3300047317 Bacteria 5003
267 Ga0495636_0007931 3300047318 Bacteria 4180
268 Ga0495636_0014815 3300047318 Bacteria 3102
269 Ga0495674_0014200 3300047319 Bacteria 7458
270 Ga0495674_0016786 3300047319 Bacteria 6829
271 Ga0495674_0071173 3300047319 Bacteria 3003
272 Ga0495674_0073640 3300047319 Bacteria 2943
273 Ga0495674_0084198 3300047319 Bacteria 2725
274 Ga0495672_0000080 3300047320 Bacteria 160361
275 Ga0495672_0051434 3300047320 Bacteria 2426
276 Ga0495676_0071592 3300047321 Bacteria 2665
277 Ga0495680_0024165 3300047322 Bacteria 5043
278 Ga0495680_0045886 3300047322 Bacteria 3448
279 Ga0495680_0112780 3300047322 Bacteria 2013
280 Ga0495683_0002019 3300047323 Bacteria 12576
281 Ga0495675_0014458 3300047444 Bacteria 4987
282 Ga0495675_0042675 3300047444 Bacteria 2889
283 Ga0495675_0077939 3300047444 Bacteria 2087
284 Ga0495679_000006 3300047446 Bacteria 449956
285 Ga0495679_009465 3300047446 Bacteria 3900
286 Ga0495685_021656 3300047447 Bacteria 2212
287 Ga0495673_0089341 3300047469 Bacteria 1261
288 Ga0495593_0011532 3300047673 Bacteria 5074
289 Ga0495593_0015224 3300047673 Bacteria 4362
290 Ga0495602_0037328 3300048088 Bacteria 4511
291 Ga0495602_0045430 3300048088 Bacteria 3974
292 Ga0495602_0095939 3300048088 Bacteria 2446
293 Ga0495614_0000900 3300048089 Bacteria 12630
294 Ga0495626_0017381 3300048091 Bacteria 3633
295 Ga0495626_0066124 3300048091 Bacteria 1635
296 Ga0496114_0017681 3300048917 Bacteria 5759
297 Ga0496115_0125108 3300048918 Bacteria 2117
298 Ga0496115_0165996 3300048918 Bacteria 1826
299 Ga0496116_0029053 3300048919 Bacteria 3992
300 Ga0496117_0060260 3300048920 Bacteria 2617
301 Ga0496118_0000259 3300048921 Bacteria 93615
302 Ga0496118_0000612 3300048921 Bacteria 58811
303 Ga0496118_0139986 3300048921 Bacteria 1536
304 Ga0496121_0000362 3300048924 Bacteria 93318
305 Ga0496121_0000396 3300048924 Bacteria 87716
306 Ga0496121_0020901 3300048924 Bacteria 6445
307 Ga0496122_0000102 3300048925 Bacteria 197296
308 Ga0496122_0054696 3300048925 Bacteria 2994
309 Ga0496123_0000742 3300048926 Bacteria 52830
310 Ga0496123_0019310 3300048926 Bacteria 5378
311 Ga0496124_0024680 3300048927 Bacteria 5460
312 Ga0496125_0000023 3300048928 Bacteria 449042
313 Ga0496125_0015265 3300048928 Bacteria 7434
314 Ga0496126_0003077 3300048929 Bacteria 21574
315 Ga0496126_0029435 3300048929 Bacteria 5217
316 Ga0496126_0096673 3300048929 Bacteria 2589
317 Ga0495678_004806 3300049459 Bacteria 7688
318 Ga0495678_007598 3300049459 Bacteria 5597
319 Ga0501070_0166375 3300049586 Bacteria 1817
320 Ga0501044_0068550 3300049823 Bacteria 3613
321 nmdc:mga00v17_134957_c1 3300050491 Bacteria 1579
322 nmdc:mga00v17_8241_c1 3300050491 Bacteria 5606
323 Ga0466962_0007528 3300061719 Bacteria 5224
324 Ga0466962_0016556 3300061719 Bacteria 3555

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046471 Ga0495650_0010375 Ga0495650_0010375_4127_5185 338
2 3300046517 Ga0495630_0142200 Ga0495630_0142200_751_1809 343
3 3300013104 Ga0157370_10005100 Ga0157370_100051002 359
4 3300005327 Ga0070658_10105652 Ga0070658_101056522 367
5 3300025933 Ga0207706_10168170 Ga0207706_101681702 367
6 3300046507 Ga0495606_0080895 Ga0495606_0080895_682_1827 368
7 3300046694 Ga0495649_0003549 Ga0495649_0003549_397_1542 368
8 3300046794 Ga0495589_0007525 Ga0495589_0007525_183_1328 368
9 3300046460 Ga0495638_0000243 Ga0495638_0000243_24996_26183 369
10 3300046491 Ga0495584_0006486 Ga0495584_0006486_4217_5404 369
11 3300047320 Ga0495672_0000080 Ga0495672_0000080_48482_49669 369
12 3300049459 Ga0495678_004806 Ga0495678_004806_4222_5409 369
13 3300046471 Ga0495650_0000011 Ga0495650_0000011_448034_449167 371
14 3300048091 Ga0495626_0017381 Ga0495626_0017381_814_2007 372
15 3300049586 Ga0501070_0166375 Ga0501070_0166375_29_1171 373
16 3300037418 Ga0395900_0041846 Ga0395900_0041846_392_1537 374
17 3300037466 Ga0395898_0019233 Ga0395898_0019233_979_2124 374
18 3300038443 Ga0395901_0000012 Ga0395901_0000012_62391_63536 374
19 3300044765 Ga0466970_0026532 Ga0466970_0026532_474_1625 374
20 3300045049 Ga0466959_0012137 Ga0466959_0012137_3107_4258 374
21 3300046474 Ga0495605_0023204 Ga0495605_0023204_1563_2801 374
22 3300025256 Ga0209759_1000618 Ga0209759_10006183 378
23 3300003784 Ga0055534_1001764 Ga0055534_10017645 380
24 3300025284 Ga0209130_1008360 Ga0209130_10083602 380
25 3300025291 Ga0209675_1001992 Ga0209675_10019923 380
26 3300025292 Ga0209676_1003816 Ga0209676_10038169 380
27 3300025299 Ga0209256_1000457 Ga0209256_100045755 380
28 3300026116 Ga0207674_10321674 Ga0207674_103216742 380
29 3300031691 Ga0316579_10003915 Ga0316579_100039154 380
30 3300031733 Ga0316577_10002649 Ga0316577_100026498 380
31 3300037418 Ga0395900_0048158 Ga0395900_0048158_1149_2339 380
32 3300037466 Ga0395898_0143673 Ga0395898_0143673_1079_2269 380
33 3300037471 Ga0395905_0146134 Ga0395905_0146134_644_1834 380
34 3300046491 Ga0495584_0009787 Ga0495584_0009787_1870_3060 380
35 3300046518 Ga0495631_0023232 Ga0495631_0023232_330_1520 380
36 3300046519 Ga0495632_0035024 Ga0495632_0035024_428_1618 380
37 3300046538 Ga0495609_0037616 Ga0495609_0037616_213_1403 380
38 3300046648 Ga0495611_0072457 Ga0495611_0072457_266_1456 380
39 3300046794 Ga0495589_0044844 Ga0495589_0044844_607_1797 380
40 3300046810 Ga0495660_0031569 Ga0495660_0031569_649_1839 380
41 3300046810 Ga0495660_0061466 Ga0495660_0061466_119_1309 380
42 3300047447 Ga0495685_021656 Ga0495685_021656_375_1565 380
43 3300048091 Ga0495626_0066124 Ga0495626_0066124_160_1350 380
44 iso_pu_bacteria 2791355137 2792833442 380
45 3300006847 Ga0075431_100102271 Ga0075431_1001022712 381
46 3300031727 Ga0316576_10047565 Ga0316576_100475652 381
47 3300031911 Ga0307412_10145560 Ga0307412_101455602 381
48 3300036401 Ga0373937_0216655 Ga0373937_0216655_38_1228 381
49 3300036712 Ga0316584_0202335 Ga0316584_0202335_158_1336 381
50 3300039145 Ga0237816_00170 Ga0237816_00170_3338_4570 381
51 3300046459 Ga0495629_0000736 Ga0495629_0000736_23976_25157 381
52 3300046471 Ga0495650_0002876 Ga0495650_0002876_11676_12857 381
53 3300046674 Ga0495588_0086722 Ga0495588_0086722_305_1486 381
54 3300048917 Ga0496114_0017681 Ga0496114_0017681_645_1826 381
55 iso_pu_bacteria 2857576091 2857577044 381
56 iso_pu_bacteria 2916699645 2916701668 381
57 iso_pu_bacteria 2939631187 2939632798 381
58 iso_pu_bacteria 2941479691 2941479828 381
59 iso_pu_bacteria 642555112 642598378 381
60 3300003781 Ga0055536_1001040 Ga0055536_10010403 382
61 3300003794 Ga0055531_10007078 Ga0055531_100070782 382
62 3300005548 Ga0070665_100092828 Ga0070665_1000928284 382
63 3300005563 Ga0068855_100073140 Ga0068855_1000731403 382
64 3300006051 Ga0075364_10066483 Ga0075364_100664832 382
65 3300009093 Ga0105240_10028638 Ga0105240_100286382 382
66 3300009545 Ga0105237_10009684 Ga0105237_100096843 382
67 3300015261 Ga0182006_1011747 Ga0182006_10117472 382
68 3300025250 Ga0209026_1000084 Ga0209026_1000084119 382
69 3300025256 Ga0209759_1001875 Ga0209759_10018755 382
70 3300025256 Ga0209759_1007135 Ga0209759_10071351 382
71 3300025292 Ga0209676_1000352 Ga0209676_100035259 382
72 3300025299 Ga0209256_1006455 Ga0209256_10064552 382
73 3300025304 Ga0209257_1000241 Ga0209257_100024188 382
74 3300025913 Ga0207695_10002672 Ga0207695_1000267211 382
75 3300025914 Ga0207671_10006598 Ga0207671_100065986 382
76 3300025949 Ga0207667_10209458 Ga0207667_102094582 382
77 3300046458 Ga0495591_002018 Ga0495591_002018_713_1960 382
78 3300046459 Ga0495629_0000299 Ga0495629_0000299_37390_38577 382
79 3300046459 Ga0495629_0131598 Ga0495629_0131598_94_1341 382
80 3300046460 Ga0495638_0000396 Ga0495638_0000396_18542_19726 382
81 3300046463 Ga0495653_0085997 Ga0495653_0085997_83_1330 382
82 3300046471 Ga0495650_0002827 Ga0495650_0002827_9133_10332 382
83 3300046472 Ga0495580_0006994 Ga0495580_0006994_1978_3165 382
84 3300046472 Ga0495580_0008476 Ga0495580_0008476_2236_3423 382
85 3300046472 Ga0495580_0012737 Ga0495580_0012737_2827_4014 382
86 3300046472 Ga0495580_0040624 Ga0495580_0040624_227_1474 382
87 3300046474 Ga0495605_0006901 Ga0495605_0006901_4764_5951 382
88 3300046476 Ga0495662_0049686 Ga0495662_0049686_764_1951 382
89 3300046506 Ga0495583_0009307 Ga0495583_0009307_1517_2704 382
90 3300046507 Ga0495606_0001807 Ga0495606_0001807_25910_27097 382
91 3300046511 Ga0495608_0010220 Ga0495608_0010220_2252_3499 382
92 3300046515 Ga0495620_0018334 Ga0495620_0018334_516_1703 382
93 3300046516 Ga0495628_0004009 Ga0495628_0004009_9722_10909 382
94 3300046517 Ga0495630_0061838 Ga0495630_0061838_967_2214 382
95 3300046524 Ga0495648_0027131 Ga0495648_0027131_821_2008 382
96 3300046526 Ga0495666_0013535 Ga0495666_0013535_2396_3643 382
97 3300046533 Ga0495640_0039277 Ga0495640_0039277_670_1917 382
98 3300046536 Ga0495587_0039738 Ga0495587_0039738_1039_2286 382
99 3300046642 Ga0495634_0021705 Ga0495634_0021705_3059_4306 382
100 3300046663 Ga0495635_0067948 Ga0495635_0067948_597_1844 382
101 3300046665 Ga0495661_0004709 Ga0495661_0004709_2134_3381 382
102 3300046665 Ga0495661_0024953 Ga0495661_0024953_1157_2344 382
103 3300046678 Ga0495599_0044524 Ga0495599_0044524_60_1247 382
104 3300046679 Ga0495623_0066683 Ga0495623_0066683_55_1242 382
105 3300046680 Ga0495646_0014219 Ga0495646_0014219_2045_3292 382
106 3300046680 Ga0495646_0031757 Ga0495646_0031757_1627_2814 382
107 3300046684 Ga0495669_0037737 Ga0495669_0037737_98_1345 382
108 3300046689 Ga0495613_0034230 Ga0495613_0034230_1883_3130 382
109 3300046690 Ga0495624_0005099 Ga0495624_0005099_6512_7699 382
110 3300046690 Ga0495624_0012941 Ga0495624_0012941_2176_3363 382
111 3300046690 Ga0495624_0015231 Ga0495624_0015231_3309_4556 382
112 3300046794 Ga0495589_0012488 Ga0495589_0012488_83_1330 382
113 3300046794 Ga0495589_0023348 Ga0495589_0023348_561_1748 382
114 3300047317 Ga0495604_0022753 Ga0495604_0022753_1645_2892 382
115 3300047318 Ga0495636_0007931 Ga0495636_0007931_729_1916 382
116 3300047319 Ga0495674_0014200 Ga0495674_0014200_3165_4352 382
117 3300047319 Ga0495674_0016786 Ga0495674_0016786_1911_3098 382
118 3300047319 Ga0495674_0071173 Ga0495674_0071173_159_1346 382
119 3300047319 Ga0495674_0073640 Ga0495674_0073640_530_1777 382
120 3300047320 Ga0495672_0051434 Ga0495672_0051434_193_1380 382
121 3300047321 Ga0495676_0071592 Ga0495676_0071592_1419_2606 382
122 3300047322 Ga0495680_0045886 Ga0495680_0045886_417_1604 382
123 3300047322 Ga0495680_0112780 Ga0495680_0112780_122_1369 382
124 3300047323 Ga0495683_0002019 Ga0495683_0002019_9213_10460 382
125 3300047444 Ga0495675_0014458 Ga0495675_0014458_1653_2900 382
126 3300047444 Ga0495675_0042675 Ga0495675_0042675_1605_2792 382
127 3300047446 Ga0495679_000006 Ga0495679_000006_393961_395148 382
128 3300047446 Ga0495679_009465 Ga0495679_009465_2124_3371 382
129 3300047673 Ga0495593_0011532 Ga0495593_0011532_3233_4420 382
130 3300048088 Ga0495602_0037328 Ga0495602_0037328_1477_2664 382
131 3300048088 Ga0495602_0045430 Ga0495602_0045430_56_1243 382
132 3300048088 Ga0495602_0095939 Ga0495602_0095939_530_1777 382
133 3300048920 Ga0496117_0060260 Ga0496117_0060260_190_1377 382
134 3300048921 Ga0496118_0000612 Ga0496118_0000612_5263_6450 382
135 3300048924 Ga0496121_0000362 Ga0496121_0000362_88680_89867 382
136 3300048928 Ga0496125_0015265 Ga0496125_0015265_3846_5033 382
137 3300048929 Ga0496126_0003077 Ga0496126_0003077_18448_19635 382
138 3300049459 Ga0495678_007598 Ga0495678_007598_3543_4730 382
139 iso_pu_bacteria 2515154122 2515682084 382
140 iso_pu_bacteria 2571042365 2572254253 382
141 iso_pu_bacteria 2643221559 2643818176 382
142 iso_pu_bacteria 2643221573 2643880363 382
143 iso_pu_bacteria 2643221586 2643937844 382
144 iso_pu_bacteria 2643221612 2644078753 382
145 iso_pu_bacteria 2643221720 2644660938 382
146 iso_pu_bacteria 2643221727 2644693530 382
147 iso_pu_bacteria 2643221728 2644699020 382
148 iso_pu_bacteria 2894023352 2894025252 382
149 iso_pu_bacteria 2902682994 2902685496 382
150 iso_pu_bacteria 2939589442 2939591321 382
151 iso_pu_bacteria 8003014200 8003014344 382
152 iso_pu_bacteria 8055266321 8055273818 382
153 3300048925 Ga0496122_0054696 Ga0496122_0054696_536_1723 383
154 3300048926 Ga0496123_0019310 Ga0496123_0019310_3416_4603 383
155 3300048929 Ga0496126_0096673 Ga0496126_0096673_253_1440 383
156 iso_pu_bacteria 2501025502 2501082053 383
157 iso_pu_bacteria 2510917013 2511088730 383
158 iso_pu_bacteria 2512047030 2512350102 383
159 iso_pu_bacteria 2513237082 2513557584 383
160 iso_pu_bacteria 2513237083 2513565077 383
161 iso_pu_bacteria 2513237151 2513963274 383
162 iso_pu_bacteria 2519103095 2519460601 383
163 iso_pu_bacteria 2526164713 2527076819 383
164 iso_pu_bacteria 2537561836 2538834571 383
165 iso_pu_bacteria 2582581311 2585293085 383
166 iso_pu_bacteria 2643221562 2643829906 383
167 iso_pu_bacteria 2643221603 2644027711 383
168 iso_pu_bacteria 2687453130 2687582349 383
169 iso_pu_bacteria 2744054900 2746090419 383
170 iso_pu_bacteria 2744054901 2746095859 383
171 iso_pu_bacteria 2816332253 2817257615 383
172 iso_pu_bacteria 2816332286 2817451558 383
173 iso_pu_bacteria 2818991446 2819600651 383
174 iso_pu_bacteria 2818991450 2819624999 383
175 iso_pu_bacteria 2858688981 2858693851 383
176 iso_pu_bacteria 2884411467 2884415188 383
177 iso_pu_bacteria 2885266251 2885266532 383
178 iso_pu_bacteria 2899924645 2899928202 383
179 iso_pu_bacteria 2904483920 2904489183 383
180 iso_pu_bacteria 2919527303 2919529796 383
181 iso_pu_bacteria 2928037797 2928041152 383
182 iso_pu_bacteria 2928044640 2928047994 383
183 iso_pu_bacteria 2928051484 2928055834 383
184 iso_pu_bacteria 2928064002 2928066686 383
185 iso_pu_bacteria 2928108538 2928109058 383
186 iso_pu_bacteria 2928135762 2928136281 383
187 iso_pu_bacteria 2928503688 2928503937 383
188 iso_pu_bacteria 2945934425 2945938312 383
189 iso_pu_bacteria 2990703756 2990708313 383
190 iso_pu_bacteria 641736151 642423444 383
191 iso_pu_bacteria 642555113 642617139 383
192 iso_pu_bacteria 8003955200 8003960189 383
193 iso_pu_bacteria 8020807995 8020811692 383
194 iso_pu_bacteria 8021622325 8021622350 383
195 iso_pu_bacteria 8021648035 8021650167 383
196 iso_pu_bacteria 8040173305 8040176728 383
197 iso_pu_bacteria 8055225921 8055226805 383
198 3300002738 JGI25154J39366_1001012 JGI25154J39366_10010125 384
199 3300003756 Ga0055533_1001286 Ga0055533_10012865 384
200 3300003762 Ga0055542_1001691 Ga0055542_10016912 384
201 3300005340 Ga0070689_100066945 Ga0070689_1000669452 384
202 3300025226 Ga0209674_100314 Ga0209674_10031429 384
203 3300025246 Ga0209646_1000027 Ga0209646_1000027187 384
204 3300025250 Ga0209026_1002600 Ga0209026_10026005 384
205 3300025253 Ga0209677_104093 Ga0209677_1040932 384
206 3300025254 Ga0209148_1000019 Ga0209148_1000019281 384
207 3300025936 Ga0207670_10017780 Ga0207670_100177803 384
208 3300044658 Ga0466972_0000446 Ga0466972_0000446_1323_2516 384
209 3300046471 Ga0495650_0000450 Ga0495650_0000450_60034_61224 384
210 3300047318 Ga0495636_0014815 Ga0495636_0014815_1018_2205 384
211 3300047469 Ga0495673_0089341 Ga0495673_0089341_40_1230 384
212 3300048918 Ga0496115_0125108 Ga0496115_0125108_48_1238 384
213 3300048924 Ga0496121_0020901 Ga0496121_0020901_4560_5750 384
214 3300048929 Ga0496126_0029435 Ga0496126_0029435_858_2048 384
215 3300050491 nmdc:mga00v17_8241_c1 nmdc:mga00v17_8241_c1_2095_3273 384
216 3300002737 JGI25162J39368_1001049 JGI25162J39368_10010494 385
217 3300002737 JGI25162J39368_1001107 JGI25162J39368_10011076 385
218 3300002741 JGI25157J39369_1000385 JGI25157J39369_100038512 385
219 3300002771 JGI25163J39215_1000818 JGI25163J39215_10008185 385
220 3300002772 JGI25164J39214_1000321 JGI25164J39214_100032113 385
221 3300003214 JGI25165J46597_1000374 JGI25165J46597_100037426 385
222 3300003751 Ga0055538_1000677 Ga0055538_10006772 385
223 3300003761 Ga0055535_1000310 Ga0055535_100031026 385
224 3300003762 Ga0055542_1000416 Ga0055542_100041632 385
225 3300003762 Ga0055542_1001060 Ga0055542_10010604 385
226 3300003763 Ga0055529_1000364 Ga0055529_100036426 385
227 3300005466 Ga0070685_10001750 Ga0070685_100017508 385
228 3300013104 Ga0157370_10148770 Ga0157370_101487702 385
229 3300013105 Ga0157369_10007459 Ga0157369_100074597 385
230 3300022467 Ga0224712_10009394 Ga0224712_100093942 385
231 3300025207 Ga0209760_100501 Ga0209760_1005017 385
232 3300025224 Ga0209784_100187 Ga0209784_10018726 385
233 3300025228 Ga0209672_102361 Ga0209672_1023612 385
234 3300025231 Ga0207427_100013 Ga0207427_100013199 385
235 3300025231 Ga0207427_101101 Ga0207427_1011018 385
236 3300025233 Ga0209437_100015 Ga0209437_100015338 385
237 3300025233 Ga0209437_100362 Ga0209437_1003628 385
238 3300025242 Ga0209258_100043 Ga0209258_100043296 385
239 3300025246 Ga0209646_1000583 Ga0209646_10005837 385
240 3300025250 Ga0209026_1000092 Ga0209026_100009284 385
241 3300025254 Ga0209148_1000005 Ga0209148_10000051061 385
242 3300025254 Ga0209148_1000010 Ga0209148_1000010576 385
243 3300025256 Ga0209759_1000437 Ga0209759_100043726 385
244 3300025261 Ga0209233_1000009 Ga0209233_1000009595 385
245 3300025272 Ga0209455_1000020 Ga0209455_100002028 385
246 3300028800 Ga0265338_10000058 Ga0265338_10000058123 385
247 3300030745 Ga0316182_1154484 Ga0316182_11544842 385
248 3300031247 Ga0265340_10014186 Ga0265340_100141861 385
249 3300037466 Ga0395898_0009193 Ga0395898_0009193_7867_9048 385
250 3300038443 Ga0395901_0005756 Ga0395901_0005756_5191_6372 385
251 3300038705 Ga0237819_00020 Ga0237819_00020_22392_23579 385
252 3300044656 Ga0466969_0000168 Ga0466969_0000168_31524_32705 385
253 3300044656 Ga0466969_0014352 Ga0466969_0014352_2270_3451 385
254 3300044659 Ga0466973_0127146 Ga0466973_0127146_866_2047 385
255 3300044683 Ga0466965_0016044 Ga0466965_0016044_1310_2491 385
256 3300044684 Ga0466966_0000060 Ga0466966_0000060_6387_7568 385
257 3300044693 Ga0466961_0000203 Ga0466961_0000203_4618_5799 385
258 3300044693 Ga0466961_0002279 Ga0466961_0002279_5079_6260 385
259 3300044693 Ga0466961_0053179 Ga0466961_0053179_1353_2534 385
260 3300044694 Ga0466963_0002445 Ga0466963_0002445_4014_5195 385
261 3300044694 Ga0466963_0010498 Ga0466963_0010498_531_1712 385
262 3300044719 Ga0466971_0001788 Ga0466971_0001788_1577_2758 385
263 3300045049 Ga0466959_0019723 Ga0466959_0019723_3607_4788 385
264 3300045049 Ga0466959_0030274 Ga0466959_0030274_2742_3923 385
265 3300045836 Ga0466958_0000708 Ga0466958_0000708_3617_4798 385
266 3300045836 Ga0466958_0030973 Ga0466958_0030973_1724_2905 385
267 3300045836 Ga0466958_0051487 Ga0466958_0051487_515_1696 385
268 3300046460 Ga0495638_0001634 Ga0495638_0001634_10320_11510 385
269 3300048921 Ga0496118_0139986 Ga0496118_0139986_193_1377 385
270 3300048924 Ga0496121_0000396 Ga0496121_0000396_12551_13735 385
271 3300048925 Ga0496122_0000102 Ga0496122_0000102_11636_12820 385
272 3300048926 Ga0496123_0000742 Ga0496123_0000742_11636_12820 385
273 3300048927 Ga0496124_0024680 Ga0496124_0024680_389_1573 385
274 3300048928 Ga0496125_0000023 Ga0496125_0000023_323454_324638 385
275 3300061719 Ga0466962_0007528 Ga0466962_0007528_4020_5201 385
276 iso_pu_bacteria 2738543013 2739252412 385
277 3300002737 JGI25162J39368_1002739 JGI25162J39368_10027392 386
278 3300002772 JGI25164J39214_1000631 JGI25164J39214_10006312 386
279 3300003214 JGI25165J46597_1003465 JGI25165J46597_10034652 386
280 3300003771 Ga0055526_1024238 Ga0055526_10242381 386
281 3300003781 Ga0055536_1000976 Ga0055536_100097616 386
282 3300003794 Ga0055531_10007844 Ga0055531_100078443 386
283 3300003794 Ga0055531_10008766 Ga0055531_100087664 386
284 3300005262 Ga0065165_1003770 Ga0065165_10037703 386
285 3300009011 Ga0105251_10001630 Ga0105251_100016303 386
286 3300014497 Ga0182008_10026045 Ga0182008_100260452 386
287 3300015262 Ga0182007_10002652 Ga0182007_100026529 386
288 3300025231 Ga0207427_100112 Ga0207427_10011247 386
289 3300025233 Ga0209437_100020 Ga0209437_10002029 386
290 3300025261 Ga0209233_1000020 Ga0209233_1000020596 386
291 3300025273 Ga0209673_1004226 Ga0209673_10042263 386
292 3300025284 Ga0209130_1011043 Ga0209130_10110433 386
293 3300025291 Ga0209675_1012627 Ga0209675_10126273 386
294 3300025292 Ga0209676_1000854 Ga0209676_100085436 386
295 3300025292 Ga0209676_1006209 Ga0209676_10062093 386
296 3300025292 Ga0209676_1011203 Ga0209676_10112033 386
297 3300025294 Ga0209025_1000562 Ga0209025_10005623 386
298 3300025298 Ga0209050_1000932 Ga0209050_100093236 386
299 3300025298 Ga0209050_1006934 Ga0209050_10069344 386
300 3300025299 Ga0209256_1003363 Ga0209256_10033634 386
301 3300025299 Ga0209256_1008355 Ga0209256_10083553 386
302 3300025303 Ga0209051_1013564 Ga0209051_10135643 386
303 3300025304 Ga0209257_1000065 Ga0209257_1000065326 386
304 3300025304 Ga0209257_1000529 Ga0209257_100052954 386
305 3300025304 Ga0209257_1000867 Ga0209257_10008676 386
306 3300025304 Ga0209257_1003596 Ga0209257_10035966 386
307 3300025304 Ga0209257_1011187 Ga0209257_10111872 386
308 3300025735 Ga0207713_1003604 Ga0207713_10036049 386
309 3300025904 Ga0207647_10017042 Ga0207647_100170423 386
310 3300042006 Ga0439432_005978 Ga0439432_005978_1751_2938 386
311 3300042993 Ga0439440_0009604 Ga0439440_0009604_371_1552 386
312 3300046557 Ga0495622_0000187 Ga0495622_0000187_3618_4805 386
313 3300048921 Ga0496118_0000259 Ga0496118_0000259_3110_4297 386
314 3300049823 Ga0501044_0068550 Ga0501044_0068550_1198_2379 386
315 3300002067 JGI24735J21928_10008066 JGI24735J21928_100080664 387
316 3300002705 JGI25156J39149_1002133 JGI25156J39149_10021332 387
317 3300002705 JGI25156J39149_1002528 JGI25156J39149_10025283 387
318 3300003214 JGI25165J46597_1002211 JGI25165J46597_10022115 387
319 3300003323 rootH1_10007150 rootH1_100071503 387
320 3300003756 Ga0055533_1000256 Ga0055533_100025626 387
321 3300003758 Ga0055532_1000007 Ga0055532_10000073 387
322 3300003760 Ga0055527_1000007 Ga0055527_1000007399 387
323 3300003761 Ga0055535_1000005 Ga0055535_10000053 387
324 3300003761 Ga0055535_1001210 Ga0055535_10012106 387
325 3300003762 Ga0055542_1000008 Ga0055542_10000083 387
326 3300003762 Ga0055542_1000129 Ga0055542_100012980 387
327 3300003763 Ga0055529_1000005 Ga0055529_10000053 387
328 3300003792 Ga0055540_1000295 Ga0055540_100029514 387
329 3300013104 Ga0157370_10015134 Ga0157370_100151344 387
330 3300016635 Ga0183361_10042 Ga0183361_100423 387
331 3300025226 Ga0209674_100020 Ga0209674_100020536 387
332 3300025228 Ga0209672_100013 Ga0209672_100013651 387
333 3300025228 Ga0209672_100387 Ga0209672_10038711 387
334 3300025229 Ga0209147_100013 Ga0209147_100013527 387
335 3300025230 Ga0209563_101294 Ga0209563_1012942 387
336 3300025242 Ga0209258_100016 Ga0209258_100016651 387
337 3300025242 Ga0209258_100240 Ga0209258_10024081 387
338 3300025254 Ga0209148_1000020 Ga0209148_1000020651 387
339 3300025254 Ga0209148_1000033 Ga0209148_100003381 387
340 3300025256 Ga0209759_1000010 Ga0209759_1000010388 387
341 3300025256 Ga0209759_1000203 Ga0209759_10002033 387
342 3300025261 Ga0209233_1000055 Ga0209233_1000055390 387
343 3300025272 Ga0209455_1000017 Ga0209455_1000017651 387
344 3300025292 Ga0209676_1000290 Ga0209676_100029026 387
345 3300025303 Ga0209051_1000141 Ga0209051_100014176 387
346 3300025321 Ga0207656_10002034 Ga0207656_100020342 387
347 3300025904 Ga0207647_10014469 Ga0207647_100144692 387
348 3300025904 Ga0207647_10050497 Ga0207647_100504972 387
349 3300025909 Ga0207705_10000864 Ga0207705_100008644 387
350 3300025949 Ga0207667_10003189 Ga0207667_100031891 387
351 3300027312 Ga0209371_1006124 Ga0209371_10061242 387
352 3300030500 Ga0268256_1006141 Ga0268256_10061412 387
353 3300031911 Ga0307412_10000002 Ga0307412_10000002614 387
354 3300037471 Ga0395905_0000029 Ga0395905_0000029_188161_189345 387
355 3300044658 Ga0466972_0041060 Ga0466972_0041060_1024_2208 387
356 3300044666 Ga0466977_0065555 Ga0466977_0065555_1045_2235 387
357 3300044672 Ga0466982_0000009 Ga0466982_0000009_217244_218428 387
358 3300044683 Ga0466965_0027077 Ga0466965_0027077_353_1537 387
359 3300044719 Ga0466971_0010790 Ga0466971_0010790_2686_3870 387
360 3300044735 Ga0466968_0014349 Ga0466968_0014349_1408_2592 387
361 3300046454 Ga0495592_0015244 Ga0495592_0015244_2436_3617 387
362 3300046459 Ga0495629_0009471 Ga0495629_0009471_2629_3810 387
363 3300046459 Ga0495629_0017395 Ga0495629_0017395_2228_3418 387
364 3300046463 Ga0495653_0020172 Ga0495653_0020172_404_1585 387
365 3300046471 Ga0495650_0020627 Ga0495650_0020627_28_1209 387
366 3300046474 Ga0495605_0010024 Ga0495605_0010024_3817_5004 387
367 3300046499 Ga0495594_0049859 Ga0495594_0049859_791_1981 387
368 3300046526 Ga0495666_0006679 Ga0495666_0006679_3843_5033 387
369 3300046526 Ga0495666_0025719 Ga0495666_0025719_899_2080 387
370 3300046531 Ga0495665_0012515 Ga0495665_0012515_1138_2328 387
371 3300046531 Ga0495665_0055004 Ga0495665_0055004_353_1534 387
372 3300046533 Ga0495640_0009723 Ga0495640_0009723_3314_4495 387
373 3300046642 Ga0495634_0064310 Ga0495634_0064310_1026_2207 387
374 3300046679 Ga0495623_0023269 Ga0495623_0023269_2744_3925 387
375 3300046680 Ga0495646_0009905 Ga0495646_0009905_1846_3027 387
376 3300046794 Ga0495589_0029412 Ga0495589_0029412_677_1858 387
377 3300046809 Ga0495600_0010569 Ga0495600_0010569_2804_3985 387
378 3300047315 Ga0495581_0004765 Ga0495581_0004765_5418_6599 387
379 3300047319 Ga0495674_0084198 Ga0495674_0084198_899_2080 387
380 3300047322 Ga0495680_0024165 Ga0495680_0024165_816_1997 387
381 3300047444 Ga0495675_0077939 Ga0495675_0077939_465_1646 387
382 3300047673 Ga0495593_0015224 Ga0495593_0015224_1822_3003 387
383 3300048089 Ga0495614_0000900 Ga0495614_0000900_8421_9602 387
384 3300048918 Ga0496115_0165996 Ga0496115_0165996_397_1587 387
385 3300048919 Ga0496116_0029053 Ga0496116_0029053_2147_3340 387
386 3300050491 nmdc:mga00v17_134957_c1 nmdc:mga00v17_134957_c1_352_1542 387
387 3300061719 Ga0466962_0016556 Ga0466962_0016556_2031_3215 387

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04303

PrpF

PrpF protein

34

415

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pw0-assembly1.cif.gz_A crystal structure of trans-aconitate bound to methylaconitate isomerase prpf from shewanella oneidensis 0.8262 5 386
3g7k-assembly3.cif.gz_C crystal structure of methylitaconate-delta-isomerase 0.8207 6 385
5k87-assembly1.cif.gz_A crystal structure of malonate bound to methylaconitate isomerase prpf from shewanella oneidensis 0.8204 3 386
2pw0-assembly1.cif.gz_A crystal structure of trans-aconitate bound to methylaconitate isomerase prpf from shewanella oneidensis 0.8184 5 386
2pvz-assembly1.cif.gz_B crystal structure of methylaconitate isomerase prpf from shewanella oneidensis 0.8165 3 386
ID Description Score Start End Superfamily
2h9fA02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9236 189 365 3.10.310.10
2h9fA02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8847 189 365 3.10.310.10
3g7kB02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8774 189 362 3.10.310.10
2pvzA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8699 3 179 3.10.310.10
2pw0B02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8608 191 365 3.10.310.10
ID Description Score Start End GO Terms
AF-A0A227J1S3-F1-model_v4 Uncharacterized protein 0.9905 216 305 GO:0016853
AF-A0A6P1B123-F1-model_v4 deleted 0.9757 196 318
AF-A0A7S1HJN4-F1-model_v4 Uncharacterized protein 0.9751 211 318 GO:0016853
AF-A0A227J1S3-F1-model_v4 Uncharacterized protein 0.9691 216 305 GO:0016853
AF-A0A3S4I6X4-F1-model_v4 3-methylitaconate isomerase (EC 5.3.3.6) 0.9664 204 360 GO:0050100

Feature Viewer

pLDDT pTM Quality
82.28 0.83 High
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Predicted Structure (AlphaFold2)

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