F431306

General Info

Members Datasets Scaffolds Average Seq Length
389 190 778 223

Family's Representative Sequence

Representative Sequence 3300002987|JGI25159J45721_1002271|JGI25159J45721_10022712
Length 256
Sequence MQCEISRSGNNVGHGDSLCKQTAIVSQLKGNGMGISDWPEDQRPRERLIRDGARALSDAELLAIFLRVGIRGKSAVELAGDMVRHFGSLQGLFRATLPEFCAVPGLGAAKYAQLQAVLELARRAIGEELQAGQALSSPAAVKEYLQLAMAGRPYESFHVLFLDVRNRLIEARELFRGTLTHTSVYPREVVREALARNAAAVMLAHNHPSGNPDPSESDLLLTRALAQALALVDIRILDHFVVAGHRVHSFAEHGQI

Samples

Sample ID Description Type Environment
1 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
9 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
10 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
11 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
12 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
13 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
16 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
17 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
31 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
32 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
35 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
36 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
37 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
40 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
41 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
47 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
48 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
49 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
50 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
69 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
72 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
73 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
82 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
83 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
84 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
87 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
91 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
96 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
97 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
100 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
101 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
108 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
109 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
110 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
113 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
114 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
115 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
116 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
117 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
118 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
119 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
120 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
121 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
122 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
123 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
124 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
125 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
126 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
127 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
128 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
129 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
130 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
131 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
132 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
133 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
134 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
135 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
136 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
148 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
156 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
159 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
160 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
161 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
162 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
163 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
164 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
165 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
166 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
167 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
168 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
169 2643221638 Duganella sp. Root336D2 Isolate Unclassified
170 2643221645 Massilia sp. Root351 Isolate Unclassified
171 2643221664 Massilia sp. Root418 Isolate Unclassified
172 2738541297 Duganella sp. GV083 Isolate Unclassified
173 2738541300 Massilia sp. GV016 Isolate Unclassified
174 2738541357 Duganella sp. GV053 Isolate Unclassified
175 2738543003 Duganella sp. GV066 Isolate Unclassified
176 2738543018 Massilia sp. GV045 Isolate Unclassified
177 2738543026 Duganella sp. GV089 Isolate Unclassified
178 2738543029 Duganella sp. GV039 Isolate Unclassified
179 2738543030 Massilia sp. GV097 Isolate Unclassified
180 2821131069 Duganella sp. 1224 Isolate Unclassified
181 2842711865 Duganella sp. R-73148 Isolate Unclassified
182 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
183 2857553236 Duganella sp. R-74557 Isolate Unclassified
184 2857558681 Duganella sp. R-74565 Isolate Unclassified
185 2857564685 Duganella sp. R-74599 Isolate Unclassified
186 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
187 2904424332 Duganella sp. 1411 Isolate Rhizosphere
188 2919476304 Duganella sp. 3397 Isolate Unclassified
189 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
190 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.57
Metatranscriptomes 0
Isolates 6.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.05
Nodule 1.03
Rhizoplane 1.8
Rhizosphere 62.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1002271 3300002987 Bacteria 7408
2 JGI25155J39150_1000985 3300002704 Bacteria 3297
3 JGI25156J39149_1006217 3300002705 Bacteria 3297
4 JGI25154J39366_1001337 3300002738 Bacteria 9057
5 JGI25154J39366_1003465 3300002738 Bacteria 3297
6 JGI25158J39367_1004241 3300002739 Bacteria 2161
7 JGI25158J39367_1006495 3300002739 Bacteria 1672
8 JGI25159J45721_1014711 3300002987 Bacteria 1751
9 JGI25165J46597_1000001 3300003214 Bacteria 1111887
10 rootL2_10050142 3300003322 Bacteria 3306
11 rootL2_10117168 3300003322 Bacteria 2536
12 JGI25161J50226_1007723 3300003374 Bacteria 1751
13 Ga0055538_1000001 3300003751 Bacteria 1111887
14 Ga0055539_1000001 3300003752 Bacteria 1111887
15 Ga0055533_1000003 3300003756 Bacteria 1111887
16 Ga0055525_1000003 3300003759 Bacteria 962094
17 Ga0055529_1000154 3300003763 Bacteria 94292
18 Ga0055526_1000237 3300003771 Bacteria 46547
19 Ga0055526_1000523 3300003771 Bacteria 30490
20 Ga0055526_1000525 3300003771 Bacteria 30396
21 Ga0055526_1003536 3300003771 Bacteria 9856
22 Ga0055526_1003732 3300003771 Bacteria 9509
23 Ga0055537_1000111 3300003773 Bacteria 61884
24 Ga0055537_1023393 3300003773 Bacteria 885
25 Ga0055524_1000015 3300003775 Bacteria 246493
26 Ga0055524_1001488 3300003775 Bacteria 13352
27 Ga0055524_1005334 3300003775 Bacteria 5762
28 Ga0055524_1008289 3300003775 Bacteria 4328
29 Ga0055534_1000268 3300003784 Bacteria 35791
30 Ga0055528_1000178 3300003790 Bacteria 53709
31 Ga0055528_1001772 3300003790 Bacteria 12394
32 Ga0055530_10041510 3300003791 Bacteria 1122
33 Ga0055530_10045976 3300003791 Bacteria 1039
34 Ga0055531_10017513 3300003794 Bacteria 3019
35 Ga0055531_10055038 3300003794 Bacteria 1015
36 Ga0055541_1000001 3300003841 Bacteria 1111887
37 Ga0055543_1011674 3300004625 Bacteria 1789
38 Ga0065165_1000224 3300005262 Bacteria 99359
39 Ga0065165_1028766 3300005262 Bacteria 1789
40 Ga0070660_100000303 3300005339 Bacteria 32729
41 Ga0070661_100231435 3300005344 Bacteria 1420
42 Ga0070659_100002592 3300005366 Bacteria 12851
43 Ga0070664_100055988 3300005564 Bacteria 3350
44 Ga0070717_10013985 3300006028 Bacteria 6164
45 Ga0075362_10009661 3300006177 Bacteria 3740
46 Ga0079104_1001970 3300006946 Bacteria 12091
47 Ga0099826_10000003 3300006948 Bacteria 1067817
48 Ga0105244_10008926 3300009036 Bacteria 6208
49 Ga0105244_10030177 3300009036 Bacteria 2887
50 Ga0105244_10106242 3300009036 Bacteria 1369
51 Ga0157371_10000001 3300013102 Bacteria 1162285
52 Ga0182008_10009272 3300014497 Bacteria 5319
53 Ga0182006_1000369 3300015261 Bacteria 37352
54 Ga0182006_1022380 3300015261 Bacteria 2628
55 Ga0182007_10000096 3300015262 Bacteria 62363
56 Ga0182007_10013376 3300015262 Bacteria 3131
57 Ga0182005_1000014 3300015265 Bacteria 389763
58 Ga0182005_1000018 3300015265 Bacteria 324307
59 Ga0182005_1000158 3300015265 Bacteria 47201
60 Ga0163161_10004222 3300017792 Bacteria 10030
61 Ga0163161_10168020 3300017792 Bacteria 1676
62 Ga0209435_100149 3300025206 Bacteria 23060
63 Ga0209436_101205 3300025208 Bacteria 9448
64 Ga0209784_100004 3300025224 Bacteria 1378156
65 Ga0209566_100004 3300025225 Bacteria 1531866
66 Ga0209674_100006 3300025226 Bacteria 1531866
67 Ga0209563_100009 3300025230 Bacteria 1378156
68 Ga0207427_101086 3300025231 Bacteria 11117
69 Ga0209437_100004 3300025233 Bacteria 1378156
70 Ga0207425_1000194 3300025245 Bacteria 48678
71 Ga0209646_1000028 3300025246 Bacteria 387986
72 Ga0209646_1003254 3300025246 Bacteria 3251
73 Ga0209026_1009257 3300025250 Bacteria 1952
74 Ga0209677_100005 3300025253 Bacteria 1378156
75 Ga0209759_1008120 3300025256 Bacteria 3303
76 Ga0209233_1000005 3300025261 Bacteria 1531866
77 Ga0209565_1000009 3300025263 Bacteria 751701
78 Ga0209565_1006812 3300025263 Bacteria 3159
79 Ga0209565_1007357 3300025263 Bacteria 2979
80 Ga0209565_1010992 3300025263 Bacteria 2224
81 Ga0209565_1013834 3300025263 Bacteria 1875
82 Ga0209565_1029159 3300025263 Bacteria 1085
83 Ga0209565_1031713 3300025263 Bacteria 1025
84 Ga0209455_1000049 3300025272 Bacteria 374414
85 Ga0209673_1000036 3300025273 Bacteria 323162
86 Ga0209673_1009351 3300025273 Bacteria 4256
87 Ga0209130_1000044 3300025284 Bacteria 241110
88 Ga0209130_1001278 3300025284 Bacteria 17422
89 Ga0209130_1001458 3300025284 Bacteria 15552
90 Ga0209675_1000013 3300025291 Bacteria 448220
91 Ga0209675_1000945 3300025291 Bacteria 18462
92 Ga0209675_1003597 3300025291 Bacteria 7287
93 Ga0209564_1000006 3300025295 Bacteria 1100927
94 Ga0209564_1000038 3300025295 Bacteria 414357
95 Ga0209564_1000122 3300025295 Bacteria 203709
96 Ga0209564_1000813 3300025295 Bacteria 42574
97 Ga0209050_1037275 3300025298 Bacteria 1405
98 Ga0209256_1000005 3300025299 Bacteria 1315082
99 Ga0209256_1000106 3300025299 Bacteria 187258
100 Ga0209256_1000269 3300025299 Bacteria 91493
101 Ga0209256_1000780 3300025299 Bacteria 41123
102 Ga0209256_1000867 3300025299 Bacteria 37536
103 Ga0209256_1051662 3300025299 Bacteria 991
104 Ga0209051_1099492 3300025303 Bacteria 786
105 Ga0209257_1000010 3300025304 Bacteria 1158682
106 Ga0209257_1001145 3300025304 Bacteria 33847
107 Ga0207655_1003458 3300025728 Bacteria 11741
108 Ga0207655_1129235 3300025728 Bacteria 825
109 Ga0207657_10000639 3300025919 Bacteria 37164
110 Ga0207649_10124352 3300025920 Bacteria 1743
111 Ga0207690_10023556 3300025932 Bacteria 3843
112 Ga0207679_10001652 3300025945 Bacteria 13911
113 Ga0209281_1003792 3300027111 Bacteria 4793
114 Ga0209282_1000002 3300027666 Bacteria 1067825
115 Ga0307515_10182396 3300028794 Bacteria 2043
116 Ga0316177_1084519 3300030731 Bacteria 4262
117 Ga0316181_1118718 3300030744 Bacteria 6781
118 Ga0316182_1354098 3300030745 Bacteria 1225
119 Ga0307408_100001547 3300031548 Bacteria 17027
120 Ga0307408_100004060 3300031548 Bacteria 9982
121 Ga0307408_100009258 3300031548 Bacteria 6492
122 Ga0307408_100068788 3300031548 Bacteria 2608
123 Ga0307408_100409436 3300031548 Bacteria 1166
124 Ga0307518_10288512 3300031838 Bacteria 1008
125 Ga0307406_10409889 3300031901 Bacteria 1077
126 Ga0307416_100024829 3300032002 Bacteria 4382
127 Ga0395899_0003099 3300037312 Bacteria 13231
128 Ga0395900_0005698 3300037418 Bacteria 13021
129 Ga0395905_0023274 3300037471 Bacteria 5857
130 Ga0395905_0178974 3300037471 Bacteria 1991
131 Ga0395905_0297240 3300037471 Bacteria 1502
132 Ga0450904_000344 3300042139 Bacteria 9724
133 Ga0466972_0000088 3300044658 Bacteria 84167
134 Ga0466972_0021640 3300044658 Bacteria 3204
135 Ga0466972_0153304 3300044658 Bacteria 1083
136 Ga0466982_0075661 3300044672 Bacteria 2082
137 Ga0466965_0003330 3300044683 Bacteria 7033
138 Ga0466965_0045980 3300044683 Bacteria 2160
139 Ga0466966_0003768 3300044684 Bacteria 9997
140 Ga0466964_0037220 3300044706 Bacteria 1953
141 Ga0466971_0118860 3300044719 Bacteria 1223
142 Ga0466970_0024553 3300044765 Bacteria 3153
143 Ga0466970_0410641 3300044765 Bacteria 773
144 Ga0466960_0056028 3300044901 Bacteria 1918
145 Ga0495617_003519 3300046452 Bacteria 5863
146 Ga0495617_003579 3300046452 Bacteria 5811
147 Ga0495617_007469 3300046452 Bacteria 3793
148 Ga0495590_0000052 3300046457 Bacteria 103480
149 Ga0495590_0006574 3300046457 Bacteria 4532
150 Ga0495638_0000066 3300046460 Bacteria 168673
151 Ga0495638_0008832 3300046460 Bacteria 7116
152 Ga0495638_0200668 3300046460 Bacteria 1126
153 Ga0495651_0008104 3300046462 Bacteria 8052
154 Ga0495653_0000011 3300046463 Bacteria 272314
155 Ga0495650_0000015 3300046471 Bacteria 557595
156 Ga0495650_0000506 3300046471 Bacteria 58187
157 Ga0495650_0000694 3300046471 Bacteria 43425
158 Ga0495650_0000721 3300046471 Bacteria 41918
159 Ga0495650_0004302 3300046471 Bacteria 9826
160 Ga0495650_0005989 3300046471 Bacteria 7700
161 Ga0495650_0072073 3300046471 Bacteria 1353
162 Ga0495650_0086633 3300046471 Bacteria 1198
163 Ga0495605_0000003 3300046474 Bacteria 491502
164 Ga0495605_0221219 3300046474 Bacteria 818
165 Ga0495584_0001366 3300046491 Bacteria 14748
166 Ga0495584_0128317 3300046491 Bacteria 1286
167 Ga0495584_0143096 3300046491 Bacteria 1214
168 Ga0495584_0202698 3300046491 Bacteria 1008
169 Ga0495585_0001823 3300046492 Bacteria 16128
170 Ga0495585_0032380 3300046492 Bacteria 2961
171 Ga0495585_0102725 3300046492 Bacteria 1527
172 Ga0495585_0220732 3300046492 Bacteria 956
173 Ga0495596_0007768 3300046500 Bacteria 4814
174 Ga0495607_0018109 3300046501 Bacteria 4499
175 Ga0495607_0025312 3300046501 Bacteria 3692
176 Ga0495607_0041870 3300046501 Bacteria 2718
177 Ga0495607_0105762 3300046501 Bacteria 1499
178 Ga0495583_0000056 3300046506 Bacteria 200858
179 Ga0495583_0000320 3300046506 Bacteria 76050
180 Ga0495583_0000808 3300046506 Bacteria 38650
181 Ga0495583_0006325 3300046506 Bacteria 7773
182 Ga0495606_0000024 3300046507 Bacteria 262080
183 Ga0495606_0000043 3300046507 Bacteria 214367
184 Ga0495606_0000920 3300046507 Bacteria 43445
185 Ga0495606_0003670 3300046507 Bacteria 16079
186 Ga0495606_0003817 3300046507 Bacteria 15629
187 Ga0495606_0006087 3300046507 Bacteria 11264
188 Ga0495606_0008132 3300046507 Bacteria 9188
189 Ga0495606_0014614 3300046507 Bacteria 6109
190 Ga0495606_0019392 3300046507 Bacteria 5062
191 Ga0495606_0037677 3300046507 Bacteria 3281
192 Ga0495608_0060324 3300046511 Bacteria 2496
193 Ga0495610_0000004 3300046512 Bacteria 1006135
194 Ga0495610_0000913 3300046512 Bacteria 27469
195 Ga0495610_0006263 3300046512 Bacteria 8243
196 Ga0495610_0048466 3300046512 Bacteria 2085
197 Ga0495610_0048537 3300046512 Bacteria 2083
198 Ga0495610_0108108 3300046512 Bacteria 1235
199 Ga0495610_0164195 3300046512 Bacteria 936
200 Ga0495616_0000057 3300046513 Bacteria 100806
201 Ga0495616_0000768 3300046513 Bacteria 23459
202 Ga0495616_0006123 3300046513 Bacteria 7324
203 Ga0495616_0038507 3300046513 Bacteria 2454
204 Ga0495616_0132105 3300046513 Bacteria 1143
205 Ga0495628_0049068 3300046516 Bacteria 3343
206 Ga0495632_0100121 3300046519 Bacteria 1366
207 Ga0495637_0000327 3300046520 Bacteria 36965
208 Ga0495637_0004506 3300046520 Bacteria 7208
209 Ga0495637_0008443 3300046520 Bacteria 5058
210 Ga0495643_0000415 3300046522 Bacteria 55824
211 Ga0495643_0000661 3300046522 Bacteria 40615
212 Ga0495643_0000747 3300046522 Bacteria 36826
213 Ga0495643_0012317 3300046522 Bacteria 5165
214 Ga0495644_0012029 3300046523 Bacteria 3324
215 Ga0495644_0031448 3300046523 Bacteria 2005
216 Ga0495644_0144841 3300046523 Bacteria 908
217 Ga0495648_0000045 3300046524 Bacteria 172587
218 Ga0495648_0010287 3300046524 Bacteria 7138
219 Ga0495648_0015249 3300046524 Bacteria 5590
220 Ga0495648_0067151 3300046524 Bacteria 2098
221 Ga0495648_0149953 3300046524 Bacteria 1217
222 Ga0495648_0150348 3300046524 Bacteria 1215
223 Ga0495642_0002363 3300046528 Bacteria 7687
224 Ga0495642_0030828 3300046528 Bacteria 2147
225 Ga0495654_0000004 3300046530 Bacteria 515304
226 Ga0495654_0004498 3300046530 Bacteria 8256
227 Ga0495654_0049125 3300046530 Bacteria 2067
228 Ga0495609_0001536 3300046538 Bacteria 15150
229 Ga0495609_0016719 3300046538 Bacteria 3416
230 Ga0495609_0018619 3300046538 Bacteria 3217
231 Ga0495609_0044144 3300046538 Bacteria 2000
232 Ga0495609_0044458 3300046538 Bacteria 1992
233 Ga0495609_0058502 3300046538 Bacteria 1705
234 Ga0495609_0089311 3300046538 Bacteria 1340
235 Ga0495597_0001053 3300046542 Bacteria 21085
236 Ga0495597_0006987 3300046542 Bacteria 5783
237 Ga0495597_0007658 3300046542 Bacteria 5463
238 Ga0495597_0011864 3300046542 Bacteria 4218
239 Ga0495597_0062372 3300046542 Bacteria 1622
240 Ga0495597_0226027 3300046542 Bacteria 742
241 Ga0495622_0000064 3300046557 Bacteria 93789
242 Ga0495622_0000371 3300046557 Bacteria 31191
243 Ga0495622_0033416 3300046557 Bacteria 2401
244 Ga0495633_0000815 3300046558 Bacteria 27611
245 Ga0495633_0001016 3300046558 Bacteria 22969
246 Ga0495633_0003338 3300046558 Bacteria 10778
247 Ga0495633_0008073 3300046558 Bacteria 5980
248 Ga0495633_0016557 3300046558 Bacteria 3797
249 Ga0495633_0057865 3300046558 Bacteria 1820
250 Ga0495633_0105850 3300046558 Bacteria 1305
251 Ga0495633_0154707 3300046558 Bacteria 1058
252 Ga0495656_0081866 3300046615 Bacteria 1458
253 Ga0495656_0300494 3300046615 Bacteria 823
254 Ga0495668_0000126 3300046616 Bacteria 114185
255 Ga0495668_0008251 3300046616 Bacteria 6528
256 Ga0495668_0011033 3300046616 Bacteria 5434
257 Ga0495668_0026402 3300046616 Bacteria 3295
258 Ga0495611_0017011 3300046648 Bacteria 3108
259 Ga0495611_0069723 3300046648 Bacteria 1606
260 Ga0495625_0002773 3300046660 Bacteria 18494
261 Ga0495625_0014575 3300046660 Bacteria 6266
262 Ga0495625_0018647 3300046660 Bacteria 5408
263 Ga0495625_0030046 3300046660 Bacteria 4057
264 Ga0495625_0044589 3300046660 Bacteria 3210
265 Ga0495625_0050987 3300046660 Bacteria 2968
266 Ga0495625_0201798 3300046660 Bacteria 1312
267 Ga0495625_0240566 3300046660 Bacteria 1178
268 Ga0495625_0240898 3300046660 Bacteria 1177
269 Ga0495659_0000169 3300046664 Bacteria 29041
270 Ga0495659_0080917 3300046664 Bacteria 1232
271 Ga0495659_0205706 3300046664 Bacteria 808
272 Ga0495661_0049366 3300046665 Bacteria 2552
273 Ga0495661_0250049 3300046665 Bacteria 905
274 Ga0495623_0016948 3300046679 Bacteria 4706
275 Ga0495670_0007119 3300046691 Bacteria 5506
276 Ga0495670_0025754 3300046691 Bacteria 2910
277 Ga0495670_0162544 3300046691 Bacteria 1173
278 Ga0495671_0000001 3300046692 Bacteria 1169494
279 Ga0495671_0075560 3300046692 Bacteria 1652
280 Ga0495671_0110065 3300046692 Bacteria 1345
281 Ga0495671_0120115 3300046692 Bacteria 1282
282 Ga0495671_0220270 3300046692 Bacteria 918
283 Ga0495649_0006825 3300046694 Bacteria 7068
284 Ga0495649_0121145 3300046694 Bacteria 1383
285 Ga0495649_0154581 3300046694 Bacteria 1204
286 Ga0495660_0001624 3300046810 Bacteria 15084
287 Ga0495660_0003775 3300046810 Bacteria 9285
288 Ga0495660_0014855 3300046810 Bacteria 4503
289 Ga0495660_0016029 3300046810 Bacteria 4323
290 Ga0495660_0020848 3300046810 Bacteria 3757
291 Ga0495636_0001423 3300047318 Bacteria 9049
292 Ga0495672_0000045 3300047320 Bacteria 255145
293 Ga0495672_0000050 3300047320 Bacteria 240336
294 Ga0495672_0000505 3300047320 Bacteria 45047
295 Ga0495672_0025806 3300047320 Bacteria 3756
296 Ga0495672_0065709 3300047320 Bacteria 2072
297 Ga0495672_0145298 3300047320 Bacteria 1234
298 Ga0495672_0237893 3300047320 Bacteria 890
299 Ga0495683_0001361 3300047323 Bacteria 16273
300 Ga0495683_0005238 3300047323 Bacteria 7205
301 Ga0495683_0046792 3300047323 Bacteria 2171
302 Ga0495687_001108 3300047443 Bacteria 26234
303 Ga0495677_0102836 3300047445 Bacteria 1082
304 Ga0495685_000113 3300047447 Bacteria 28884
305 Ga0495685_158151 3300047447 Bacteria 735
306 Ga0495673_0000006 3300047469 Bacteria 908691
307 Ga0495673_0000014 3300047469 Bacteria 599202
308 Ga0495673_0036425 3300047469 Bacteria 2257
309 Ga0495673_0099299 3300047469 Bacteria 1179
310 Ga0495673_0201086 3300047469 Bacteria 745
311 Ga0495681_0009392 3300047470 Bacteria 6031
312 Ga0495686_0000288 3300047472 Bacteria 88523
313 Ga0495686_0001006 3300047472 Bacteria 34250
314 Ga0495686_0001432 3300047472 Bacteria 26052
315 Ga0495686_0012449 3300047472 Bacteria 5949
316 Ga0495686_0016710 3300047472 Bacteria 4967
317 Ga0495686_0296348 3300047472 Bacteria 894
318 Ga0495626_0002646 3300048091 Bacteria 12159
319 Ga0496102_0000454 3300048905 Bacteria 46487
320 Ga0496102_0041419 3300048905 Bacteria 4170
321 Ga0496103_0015241 3300048906 Bacteria 4571
322 Ga0496110_0142012 3300048913 Bacteria 2171
323 Ga0496111_0266341 3300048914 Bacteria 1271
324 Ga0496114_0144174 3300048917 Bacteria 2064
325 Ga0496116_0016704 3300048919 Bacteria 5732
326 Ga0496116_0030751 3300048919 Bacteria 3853
327 Ga0496116_0089562 3300048919 Bacteria 1876
328 Ga0496117_0000001 3300048920 Bacteria 2526244
329 Ga0496118_0000008 3300048921 Bacteria 644537
330 Ga0496119_0287035 3300048922 Bacteria 816
331 Ga0496120_0063843 3300048923 Bacteria 2047
332 Ga0496121_0001199 3300048924 Bacteria 45399
333 Ga0496121_0039413 3300048924 Bacteria 4164
334 Ga0496121_0050587 3300048924 Bacteria 3509
335 Ga0496121_0084066 3300048924 Bacteria 2511
336 Ga0496122_0053002 3300048925 Bacteria 3062
337 Ga0496123_0007485 3300048926 Bacteria 10265
338 Ga0496123_0014231 3300048926 Bacteria 6613
339 Ga0496124_0060094 3300048927 Bacteria 3190
340 Ga0496124_0185221 3300048927 Bacteria 1598
341 Ga0496124_0197837 3300048927 Bacteria 1531
342 Ga0496124_0238291 3300048927 Bacteria 1355
343 Ga0496125_0012235 3300048928 Bacteria 8535
344 Ga0496125_0151737 3300048928 Bacteria 1590
345 Ga0496126_0014647 3300048929 Bacteria 7916
346 Ga0496126_0187639 3300048929 Bacteria 1753
347 Ga0495678_000016 3300049459 Bacteria 303426
348 Ga0495678_000910 3300049459 Bacteria 25989
349 Ga0495678_003924 3300049459 Bacteria 8918
350 Ga0495678_020405 3300049459 Bacteria 2935
351 Ga0495678_105671 3300049459 Bacteria 968
352 Ga0495682_0022493 3300049460 Bacteria 2357
353 Ga0495682_0022494 3300049460 Bacteria 2357
354 Ga0495682_0043384 3300049460 Bacteria 1647
355 Ga0501034_0252947 3300049571 Bacteria 1706
356 Ga0501222_007890 3300049662 Bacteria 1418
357 Ga0501238_019249 3300049671 Bacteria 958
358 Ga0501249_003327 3300049679 Bacteria 3226
359 Ga0501269_000294 3300049766 Bacteria 13645
360 Ga0500618_000426 3300053125 Bacteria 28249
361 Ga0500573_0169073 3300053140 Bacteria 1184
362 Ga0500586_000871 3300053145 Bacteria 6235
363 Ga0500586_015833 3300053145 Bacteria 2274
364 Ga0466962_0041295 3300061719 Bacteria 2207
365 2511248384 2511231003 Bacteria 5606035
366 2601670994 2600255292 Bacteria 6300551
367 2643788354 2643221554 Bacteria 6603920
368 2644213718 2643221638 Bacteria 6579467
369 2644253846 2643221645 Bacteria 7207331
370 2644356619 2643221664 Bacteria 7272945
371 2738825147 2738541297 Bacteria 6549566
372 2738844639 2738541300 Bacteria 6675882
373 2739148944 2738541357 Bacteria 6549408
374 2739190863 2738543003 Bacteria 6549560
375 2739276163 2738543018 Bacteria 6718814
376 2739317340 2738543026 Bacteria 6549408
377 2739335581 2738543029 Bacteria 6549249
378 2739345313 2738543030 Bacteria 6719714
379 2821133744 2821131069 Bacteria 6108407
380 2842717191 2842711865 Bacteria 7155354
381 2857547766 2857547612 Bacteria 6179999
382 2857553856 2857553236 Bacteria 6166726
383 2857560360 2857558681 Bacteria 6617694
384 2857565537 2857564685 Bacteria 6290584
385 2885086215 2885080285 Bacteria 6355622
386 2904430594 2904424332 Bacteria 7633521
387 2919480472 2919476304 Bacteria 5888696
388 2932412371 2932410948 Bacteria 6312192
389 2932419886 2932416698 Bacteria 6315112
390 JGI25159J45721_1002271
391 JGI25155J39150_1000985
392 JGI25156J39149_1006217
393 JGI25154J39366_1001337
394 JGI25154J39366_1003465
395 JGI25158J39367_1004241
396 JGI25158J39367_1006495
397 JGI25159J45721_1014711
398 JGI25165J46597_1000001
399 rootL2_10050142
400 rootL2_10117168
401 JGI25161J50226_1007723
402 Ga0055538_1000001
403 Ga0055539_1000001
404 Ga0055533_1000003
405 Ga0055525_1000003
406 Ga0055529_1000154
407 Ga0055526_1000237
408 Ga0055526_1000523
409 Ga0055526_1000525
410 Ga0055526_1003536
411 Ga0055526_1003732
412 Ga0055537_1000111
413 Ga0055537_1023393
414 Ga0055524_1000015
415 Ga0055524_1001488
416 Ga0055524_1005334
417 Ga0055524_1008289
418 Ga0055534_1000268
419 Ga0055528_1000178
420 Ga0055528_1001772
421 Ga0055530_10041510
422 Ga0055530_10045976
423 Ga0055531_10017513
424 Ga0055531_10055038
425 Ga0055541_1000001
426 Ga0055543_1011674
427 Ga0065165_1000224
428 Ga0065165_1028766
429 Ga0070660_100000303
430 Ga0070661_100231435
431 Ga0070659_100002592
432 Ga0070664_100055988
433 Ga0070717_10013985
434 Ga0075362_10009661
435 Ga0079104_1001970
436 Ga0099826_10000003
437 Ga0105244_10008926
438 Ga0105244_10030177
439 Ga0105244_10106242
440 Ga0157371_10000001
441 Ga0182008_10009272
442 Ga0182006_1000369
443 Ga0182006_1022380
444 Ga0182007_10000096
445 Ga0182007_10013376
446 Ga0182005_1000014
447 Ga0182005_1000018
448 Ga0182005_1000158
449 Ga0163161_10004222
450 Ga0163161_10168020
451 Ga0209435_100149
452 Ga0209436_101205
453 Ga0209784_100004
454 Ga0209566_100004
455 Ga0209674_100006
456 Ga0209563_100009
457 Ga0207427_101086
458 Ga0209437_100004
459 Ga0207425_1000194
460 Ga0209646_1000028
461 Ga0209646_1003254
462 Ga0209026_1009257
463 Ga0209677_100005
464 Ga0209759_1008120
465 Ga0209233_1000005
466 Ga0209565_1000009
467 Ga0209565_1006812
468 Ga0209565_1007357
469 Ga0209565_1010992
470 Ga0209565_1013834
471 Ga0209565_1029159
472 Ga0209565_1031713
473 Ga0209455_1000049
474 Ga0209673_1000036
475 Ga0209673_1009351
476 Ga0209130_1000044
477 Ga0209130_1001278
478 Ga0209130_1001458
479 Ga0209675_1000013
480 Ga0209675_1000945
481 Ga0209675_1003597
482 Ga0209564_1000006
483 Ga0209564_1000038
484 Ga0209564_1000122
485 Ga0209564_1000813
486 Ga0209050_1037275
487 Ga0209256_1000005
488 Ga0209256_1000106
489 Ga0209256_1000269
490 Ga0209256_1000780
491 Ga0209256_1000867
492 Ga0209256_1051662
493 Ga0209051_1099492
494 Ga0209257_1000010
495 Ga0209257_1001145
496 Ga0207655_1003458
497 Ga0207655_1129235
498 Ga0207657_10000639
499 Ga0207649_10124352
500 Ga0207690_10023556
501 Ga0207679_10001652
502 Ga0209281_1003792
503 Ga0209282_1000002
504 Ga0307515_10182396
505 Ga0316177_1084519
506 Ga0316181_1118718
507 Ga0316182_1354098
508 Ga0307408_100001547
509 Ga0307408_100004060
510 Ga0307408_100009258
511 Ga0307408_100068788
512 Ga0307408_100409436
513 Ga0307518_10288512
514 Ga0307406_10409889
515 Ga0307416_100024829
516 Ga0395899_0003099
517 Ga0395900_0005698
518 Ga0395905_0023274
519 Ga0395905_0178974
520 Ga0395905_0297240
521 Ga0450904_000344
522 Ga0466972_0000088
523 Ga0466972_0021640
524 Ga0466972_0153304
525 Ga0466982_0075661
526 Ga0466965_0003330
527 Ga0466965_0045980
528 Ga0466966_0003768
529 Ga0466964_0037220
530 Ga0466971_0118860
531 Ga0466970_0024553
532 Ga0466970_0410641
533 Ga0466960_0056028
534 Ga0495617_003519
535 Ga0495617_003579
536 Ga0495617_007469
537 Ga0495590_0000052
538 Ga0495590_0006574
539 Ga0495638_0000066
540 Ga0495638_0008832
541 Ga0495638_0200668
542 Ga0495651_0008104
543 Ga0495653_0000011
544 Ga0495650_0000015
545 Ga0495650_0000506
546 Ga0495650_0000694
547 Ga0495650_0000721
548 Ga0495650_0004302
549 Ga0495650_0005989
550 Ga0495650_0072073
551 Ga0495650_0086633
552 Ga0495605_0000003
553 Ga0495605_0221219
554 Ga0495584_0001366
555 Ga0495584_0128317
556 Ga0495584_0143096
557 Ga0495584_0202698
558 Ga0495585_0001823
559 Ga0495585_0032380
560 Ga0495585_0102725
561 Ga0495585_0220732
562 Ga0495596_0007768
563 Ga0495607_0018109
564 Ga0495607_0025312
565 Ga0495607_0041870
566 Ga0495607_0105762
567 Ga0495583_0000056
568 Ga0495583_0000320
569 Ga0495583_0000808
570 Ga0495583_0006325
571 Ga0495606_0000024
572 Ga0495606_0000043
573 Ga0495606_0000920
574 Ga0495606_0003670
575 Ga0495606_0003817
576 Ga0495606_0006087
577 Ga0495606_0008132
578 Ga0495606_0014614
579 Ga0495606_0019392
580 Ga0495606_0037677
581 Ga0495608_0060324
582 Ga0495610_0000004
583 Ga0495610_0000913
584 Ga0495610_0006263
585 Ga0495610_0048466
586 Ga0495610_0048537
587 Ga0495610_0108108
588 Ga0495610_0164195
589 Ga0495616_0000057
590 Ga0495616_0000768
591 Ga0495616_0006123
592 Ga0495616_0038507
593 Ga0495616_0132105
594 Ga0495628_0049068
595 Ga0495632_0100121
596 Ga0495637_0000327
597 Ga0495637_0004506
598 Ga0495637_0008443
599 Ga0495643_0000415
600 Ga0495643_0000661
601 Ga0495643_0000747
602 Ga0495643_0012317
603 Ga0495644_0012029
604 Ga0495644_0031448
605 Ga0495644_0144841
606 Ga0495648_0000045
607 Ga0495648_0010287
608 Ga0495648_0015249
609 Ga0495648_0067151
610 Ga0495648_0149953
611 Ga0495648_0150348
612 Ga0495642_0002363
613 Ga0495642_0030828
614 Ga0495654_0000004
615 Ga0495654_0004498
616 Ga0495654_0049125
617 Ga0495609_0001536
618 Ga0495609_0016719
619 Ga0495609_0018619
620 Ga0495609_0044144
621 Ga0495609_0044458
622 Ga0495609_0058502
623 Ga0495609_0089311
624 Ga0495597_0001053
625 Ga0495597_0006987
626 Ga0495597_0007658
627 Ga0495597_0011864
628 Ga0495597_0062372
629 Ga0495597_0226027
630 Ga0495622_0000064
631 Ga0495622_0000371
632 Ga0495622_0033416
633 Ga0495633_0000815
634 Ga0495633_0001016
635 Ga0495633_0003338
636 Ga0495633_0008073
637 Ga0495633_0016557
638 Ga0495633_0057865
639 Ga0495633_0105850
640 Ga0495633_0154707
641 Ga0495656_0081866
642 Ga0495656_0300494
643 Ga0495668_0000126
644 Ga0495668_0008251
645 Ga0495668_0011033
646 Ga0495668_0026402
647 Ga0495611_0017011
648 Ga0495611_0069723
649 Ga0495625_0002773
650 Ga0495625_0014575
651 Ga0495625_0018647
652 Ga0495625_0030046
653 Ga0495625_0044589
654 Ga0495625_0050987
655 Ga0495625_0201798
656 Ga0495625_0240566
657 Ga0495625_0240898
658 Ga0495659_0000169
659 Ga0495659_0080917
660 Ga0495659_0205706
661 Ga0495661_0049366
662 Ga0495661_0250049
663 Ga0495623_0016948
664 Ga0495670_0007119
665 Ga0495670_0025754
666 Ga0495670_0162544
667 Ga0495671_0000001
668 Ga0495671_0075560
669 Ga0495671_0110065
670 Ga0495671_0120115
671 Ga0495671_0220270
672 Ga0495649_0006825
673 Ga0495649_0121145
674 Ga0495649_0154581
675 Ga0495660_0001624
676 Ga0495660_0003775
677 Ga0495660_0014855
678 Ga0495660_0016029
679 Ga0495660_0020848
680 Ga0495636_0001423
681 Ga0495672_0000045
682 Ga0495672_0000050
683 Ga0495672_0000505
684 Ga0495672_0025806
685 Ga0495672_0065709
686 Ga0495672_0145298
687 Ga0495672_0237893
688 Ga0495683_0001361
689 Ga0495683_0005238
690 Ga0495683_0046792
691 Ga0495687_001108
692 Ga0495677_0102836
693 Ga0495685_000113
694 Ga0495685_158151
695 Ga0495673_0000006
696 Ga0495673_0000014
697 Ga0495673_0036425
698 Ga0495673_0099299
699 Ga0495673_0201086
700 Ga0495681_0009392
701 Ga0495686_0000288
702 Ga0495686_0001006
703 Ga0495686_0001432
704 Ga0495686_0012449
705 Ga0495686_0016710
706 Ga0495686_0296348
707 Ga0495626_0002646
708 Ga0496102_0000454
709 Ga0496102_0041419
710 Ga0496103_0015241
711 Ga0496110_0142012
712 Ga0496111_0266341
713 Ga0496114_0144174
714 Ga0496116_0016704
715 Ga0496116_0030751
716 Ga0496116_0089562
717 Ga0496117_0000001
718 Ga0496118_0000008
719 Ga0496119_0287035
720 Ga0496120_0063843
721 Ga0496121_0001199
722 Ga0496121_0039413
723 Ga0496121_0050587
724 Ga0496121_0084066
725 Ga0496122_0053002
726 Ga0496123_0007485
727 Ga0496123_0014231
728 Ga0496124_0060094
729 Ga0496124_0185221
730 Ga0496124_0197837
731 Ga0496124_0238291
732 Ga0496125_0012235
733 Ga0496125_0151737
734 Ga0496126_0014647
735 Ga0496126_0187639
736 Ga0495678_000016
737 Ga0495678_000910
738 Ga0495678_003924
739 Ga0495678_020405
740 Ga0495678_105671
741 Ga0495682_0022493
742 Ga0495682_0022494
743 Ga0495682_0043384
744 Ga0501034_0252947
745 Ga0501222_007890
746 Ga0501238_019249
747 Ga0501249_003327
748 Ga0501269_000294
749 Ga0500618_000426
750 Ga0500573_0169073
751 Ga0500586_000871
752 Ga0500586_015833
753 Ga0466962_0041295
754 2511248384
755 2601670994
756 2643788354
757 2644213718
758 2644253846
759 2644356619
760 2738825147
761 2738844639
762 2739148944
763 2739190863
764 2739276163
765 2739317340
766 2739335581
767 2739345313
768 2821133744
769 2842717191
770 2857547766
771 2857553856
772 2857560360
773 2857565537
774 2885086215
775 2904430594
776 2919480472
777 2932412371
778 2932419886

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04002

RadC

RadC-like JAB domain

135

255

0.98

PF20582

UPF0758_N

UPF0758 N-terminal

35

112

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qlc-assembly5.cif.gz_E the crystal structure of dna repair protein radc from chlorobium tepidum tls 0.9143 107 224
2qlc-assembly5.cif.gz_E the crystal structure of dna repair protein radc from chlorobium tepidum tls 0.8664 107 224
4h4n-assembly1.cif.gz_A 1.1 angstrom crystal structure of hypothetical protein ba_2335 from bacillus anthracis 0.8421 123 143
7eh9-assembly2.cif.gz_B crystal structure of the flagellar hook cap fragment from salmonella enterica serovar typhimurium 0.8061 124 145
7eh9-assembly1.cif.gz_A crystal structure of the flagellar hook cap fragment from salmonella enterica serovar typhimurium 0.7891 122 145
ID Description Score Start End Superfamily
af_Q47685_35_158_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9738 105 224 3.40.140.10
af_P25531_100_221_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9689 102 222 3.40.140.10
af_P31337_89_213_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9618 105 222 3.40.140.10
af_P25531_100_221_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9534 102 222 3.40.140.10
af_Q47685_35_158_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9353 105 224 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A645FQ93-F1-model_v4 MPN domain-containing protein 0.9973 152 224 GO:0006508
GO:0008237
GO:0046872
AF-A0A848MZW4-F1-model_v4 MPN domain-containing protein 0.9832 152 224 GO:0006508
GO:0008237
GO:0046872
AF-A0A3D4BCK8-F1-model_v4 MPN domain-containing protein 0.9806 153 224 GO:0006508
GO:0008237
GO:0046872
AF-A0A523YAF6-F1-model_v4 DNA repair protein RadC 0.9772 111 223 GO:0006508
GO:0008237
GO:0046872
AF-A0A2T5U390-F1-model_v4 RadC-like JAB domain-containing protein 0.977 151 224 GO:0006508
GO:0008237
GO:0046872

Map