F431907

General Info

Members Datasets Scaffolds Average Seq Length
391 243 317 149

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10085860|rootH2_100858601
Length 173
Sequence LAGTRTLRAGRRPRRLIPRYRVAKILVLHGPNLNLLGTREPEVYGRDTLADIDAMLLQRAQTAGHSLESLQSNAEHALVDRIHQARLDGTTIILINPGAFTHTSIALRDALAGVAIPFIELHLSNVHAREAFRKHSYLSDIAVGVICGFGADSYRLALDAALSRLDRAGVSAS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
3 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
4 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
5 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
6 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
7 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
8 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
9 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
10 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
11 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
12 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
13 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
14 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
15 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
16 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
17 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
18 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
19 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
20 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
21 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
22 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
23 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
24 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
25 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
26 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
27 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
28 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
29 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
30 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
31 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
32 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
33 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
34 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
35 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
36 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
37 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
38 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
39 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
40 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
41 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
42 2739367700 Dyella sp. YR388 Isolate Unclassified
43 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
44 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
45 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
46 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
47 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
48 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
49 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
50 2884411467 Dyella sp. AD56 Isolate Rhizosphere
51 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
52 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
53 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
54 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
55 2904504865 Serratia marcescens 1822 Isolate Unclassified
56 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
57 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
58 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
59 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
60 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
61 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
62 2919150387 Rahnella aceris 1817 Isolate Unclassified
63 2927143783 Rahnella sp. 2050 Isolate Unclassified
64 2928963466 Dyella japonica 1073 Isolate Unclassified
65 2952252522 Salinicola sp. DM10 Isolate Unclassified
66 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
67 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
68 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
69 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
70 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
71 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
72 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
73 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
74 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
75 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
76 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
77 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
78 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
79 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
80 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
81 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
82 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
83 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
84 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
85 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
86 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
87 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
88 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
89 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
90 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
91 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
92 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
93 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
94 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
95 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
96 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
97 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
98 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
99 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
100 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
101 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
102 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
103 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
104 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
105 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
106 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
107 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
108 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
109 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
110 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
111 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
112 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
113 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
114 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
115 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
116 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
117 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
118 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
119 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
120 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
121 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
122 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
123 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
124 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
125 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
126 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
127 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
128 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
129 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
130 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
131 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
132 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
133 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
134 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
135 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
139 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
141 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
142 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
143 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
144 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
145 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
146 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
147 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
148 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
149 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
150 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
166 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
167 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
168 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
170 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
172 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
173 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
174 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
175 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
176 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
177 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
178 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
179 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
180 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
181 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
182 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
183 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
184 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
185 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
186 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
187 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
188 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
189 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
190 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
191 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
192 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
193 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
194 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
195 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
196 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
197 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
198 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
199 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
200 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
201 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
202 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
203 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
204 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
205 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
206 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
207 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
208 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
209 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
210 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
211 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
212 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
213 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
214 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
215 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
216 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
217 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
218 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
219 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
220 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
221 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
222 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
223 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
224 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
225 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
226 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
227 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
228 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
229 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
230 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
231 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
232 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
233 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
234 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
235 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
236 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
237 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
238 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
239 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
240 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
241 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
242 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
243 8055693939 Hafnia alvei A23BA Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.84
Metatranscriptomes 0
Isolates 18.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.48
Nodule 0.26
Rhizoplane 12.79
Rhizosphere 47.57
Stem 0
Stem Tuber 1.28
Unclassified 16.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2263729 2162886007 Bacteria 5214
2 JGI24735J21928_10024388 3300002067 Bacteria 1831
3 JGI25156J39149_1018861 3300002705 Bacteria 1263
4 JGI25162J39368_1000031 3300002737 Bacteria 210480
5 JGI25162J39368_1000478 3300002737 Bacteria 30707
6 JGI25162J39368_1000592 3300002737 Bacteria 26378
7 JGI25162J39368_1004671 3300002737 Bacteria 3065
8 JGI25157J39369_1000727 3300002741 Bacteria 17555
9 JGI25163J39215_1000033 3300002771 Bacteria 64420
10 JGI25163J39215_1000094 3300002771 Bacteria 37245
11 JGI25163J39215_1000393 3300002771 Bacteria 13900
12 JGI25163J39215_1000441 3300002771 Bacteria 12726
13 JGI25164J39214_1000050 3300002772 Bacteria 122934
14 JGI25164J39214_1000325 3300002772 Bacteria 30707
15 JGI25164J39214_1000544 3300002772 Bacteria 17561
16 JGI25164J39214_1000817 3300002772 Bacteria 10987
17 JGI25165J46597_1000706 3300003214 Bacteria 26378
18 JGI25165J46597_1010250 3300003214 Bacteria 1373
19 rootH2_10085860 3300003320 Bacteria 1069
20 Ga0055538_1000004 3300003751 Bacteria 615646
21 Ga0055538_1000235 3300003751 Bacteria 30707
22 Ga0055538_1001424 3300003751 Bacteria 4624
23 Ga0055539_1000004 3300003752 Bacteria 615646
24 Ga0055539_1000270 3300003752 Bacteria 30707
25 Ga0055533_1000007 3300003756 Bacteria 615646
26 Ga0055533_1000261 3300003756 Bacteria 30707
27 Ga0055525_1000007 3300003759 Bacteria 615646
28 Ga0055525_1000306 3300003759 Bacteria 40206
29 Ga0055525_1000362 3300003759 Bacteria 30707
30 Ga0055527_1000060 3300003760 Bacteria 92147
31 Ga0055535_1000412 3300003761 Bacteria 40225
32 Ga0055535_1000685 3300003761 Bacteria 26366
33 Ga0055542_1000171 3300003762 Bacteria 80629
34 Ga0055542_1000346 3300003762 Bacteria 48864
35 Ga0055542_1000706 3300003762 Bacteria 26378
36 Ga0055529_1000388 3300003763 Bacteria 47502
37 Ga0055529_1000624 3300003763 Bacteria 26378
38 Ga0055541_1000004 3300003841 Bacteria 615646
39 Ga0055541_1000170 3300003841 Bacteria 30707
40 Ga0065704_10000928 3300005289 Bacteria 35626
41 Ga0065704_10001152 3300005289 Bacteria 12328
42 Ga0070658_10006834 3300005327 Bacteria 9223
43 Ga0070670_101041079 3300005331 Bacteria 745
44 Ga0070666_10000268 3300005335 Bacteria 34712
45 Ga0070682_100798630 3300005337 Unclassified 766
46 Ga0068868_100327614 3300005338 Bacteria 1306
47 Ga0070660_100000501 3300005339 Bacteria 26152
48 Ga0070689_100007867 3300005340 Bacteria 7474
49 Ga0070661_100010308 3300005344 Bacteria 6496
50 Ga0070661_100092836 3300005344 Bacteria 2237
51 Ga0070661_100119214 3300005344 Bacteria 1975
52 Ga0070668_100461971 3300005347 Bacteria 1093
53 Ga0070674_100475345 3300005356 Bacteria 1036
54 Ga0070688_100181839 3300005365 Bacteria 1459
55 Ga0070688_100939571 3300005365 Bacteria 684
56 Ga0070659_100017119 3300005366 Bacteria 5449
57 Ga0070667_100165505 3300005367 Bacteria 1950
58 Ga0070663_100121070 3300005455 Bacteria 1977
59 Ga0070663_100124402 3300005455 Bacteria 1952
60 Ga0070678_101078128 3300005456 Bacteria 741
61 Ga0070681_10132832 3300005458 Bacteria 2421
62 Ga0070681_10326211 3300005458 Bacteria 1445
63 Ga0070685_10001206 3300005466 Bacteria 13756
64 Ga0070685_10002262 3300005466 Bacteria 9934
65 Ga0070685_10169847 3300005466 Bacteria 1397
66 Ga0070693_101497538 3300005547 Bacteria 527
67 Ga0070665_100005112 3300005548 Bacteria 13604
68 Ga0070664_100035139 3300005564 Bacteria 4207
69 Ga0068857_100452284 3300005577 Bacteria 1201
70 Ga0068854_100002409 3300005578 Bacteria 11540
71 Ga0068854_100276240 3300005578 Bacteria 1351
72 Ga0068852_100001672 3300005616 Bacteria 15111
73 Ga0068852_100437771 3300005616 Bacteria 1292
74 Ga0068860_100018895 3300005843 Bacteria 6697
75 Ga0068860_100279000 3300005843 Bacteria 1632
76 Ga0068862_100453619 3300005844 Bacteria 1209
77 Ga0081455_10004827 3300005937 Bacteria 14978
78 Ga0075364_10051861 3300006051 Bacteria 2680
79 Ga0068871_100822181 3300006358 Bacteria 857
80 Ga0079104_1041666 3300006946 Bacteria 1068
81 Ga0105251_10048838 3300009011 Bacteria 2027
82 Ga0105244_10000205 3300009036 Bacteria 60526
83 Ga0105244_10000460 3300009036 Bacteria 37216
84 Ga0105244_10000766 3300009036 Bacteria 27448
85 Ga0105244_10006066 3300009036 Bacteria 7909
86 Ga0105244_10020741 3300009036 Bacteria 3645
87 Ga0105250_10000073 3300009092 Bacteria 94051
88 Ga0105250_10000098 3300009092 Bacteria 78269
89 Ga0105250_10000503 3300009092 Bacteria 27444
90 Ga0105240_10048589 3300009093 Bacteria 5361
91 Ga0105243_10149211 3300009148 Bacteria 2004
92 Ga0105241_10658775 3300009174 Bacteria 952
93 Ga0105237_10003535 3300009545 Bacteria 18521
94 Ga0105238_10000004 3300009551 Bacteria 390514
95 Ga0105238_10000428 3300009551 Bacteria 44396
96 Ga0105238_10210839 3300009551 Bacteria 1919
97 Ga0105238_10640281 3300009551 Bacteria 1073
98 Ga0105239_10003999 3300010375 Bacteria 17858
99 Ga0157371_10000098 3300013102 Bacteria 134017
100 Ga0157371_10000272 3300013102 Bacteria 70187
101 Ga0157370_10008932 3300013104 Bacteria 10766
102 Ga0157369_10585474 3300013105 Bacteria 1152
103 Ga0163162_10005941 3300013306 Bacteria 11813
104 Ga0163162_10010172 3300013306 Bacteria 9137
105 Ga0163162_10104340 3300013306 Bacteria 2929
106 Ga0163162_10200727 3300013306 Bacteria 2123
107 Ga0157372_10095601 3300013307 Bacteria 3385
108 Ga0163163_10790746 3300014325 Bacteria 1012
109 Ga0182008_10181457 3300014497 Bacteria 1065
110 Ga0157376_10177338 3300014969 Bacteria 1945
111 Ga0182006_1002353 3300015261 Bacteria 10378
112 Ga0182005_1048061 3300015265 Bacteria 1160
113 Ga0183368_1007 3300015687 Bacteria 405609
114 Ga0209435_110360 3300025206 Bacteria 1009
115 Ga0209760_100006 3300025207 Bacteria 224535
116 Ga0209760_100073 3300025207 Bacteria 81377
117 Ga0209760_100441 3300025207 Bacteria 9635
118 Ga0209784_100001 3300025224 Bacteria 3600592
119 Ga0209784_100300 3300025224 Bacteria 26577
120 Ga0209566_100001 3300025225 Bacteria 3600765
121 Ga0209674_100002 3300025226 Bacteria 3600592
122 Ga0209674_100037 3300025226 Bacteria 404339
123 Ga0209672_100043 3300025228 Bacteria 270302
124 Ga0209672_101041 3300025228 Bacteria 11937
125 Ga0209672_111371 3300025228 Bacteria 1155
126 Ga0209563_100002 3300025230 Bacteria 2045675
127 Ga0209563_100008 3300025230 Bacteria 1554545
128 Ga0209563_100062 3300025230 Bacteria 264769
129 Ga0207427_100002 3300025231 Bacteria 1355321
130 Ga0207427_100032 3300025231 Bacteria 349939
131 Ga0207427_100387 3300025231 Bacteria 26467
132 Ga0207427_100389 3300025231 Bacteria 26460
133 Ga0207427_101610 3300025231 Bacteria 7701
134 Ga0209437_100001 3300025233 Bacteria 2045675
135 Ga0209437_100114 3300025233 Bacteria 210697
136 Ga0209437_100132 3300025233 Bacteria 178495
137 Ga0209437_100316 3300025233 Bacteria 63264
138 Ga0209437_100532 3300025233 Bacteria 26430
139 Ga0209258_100076 3300025242 Bacteria 270302
140 Ga0209258_100526 3300025242 Bacteria 36555
141 Ga0209258_101940 3300025242 Bacteria 6056
142 Ga0209258_105144 3300025242 Bacteria 2288
143 Ga0209646_1001431 3300025246 Bacteria 6420
144 Ga0209026_1000531 3300025250 Bacteria 26430
145 Ga0209026_1013620 3300025250 Bacteria 1380
146 Ga0209677_100002 3300025253 Bacteria 2045675
147 Ga0209677_100004 3300025253 Bacteria 1554545
148 Ga0209148_1000047 3300025254 Bacteria 434369
149 Ga0209148_1000055 3300025254 Bacteria 367500
150 Ga0209148_1000082 3300025254 Bacteria 270302
151 Ga0209759_1000787 3300025256 Bacteria 26452
152 Ga0209759_1008238 3300025256 Bacteria 3265
153 Ga0209233_1000100 3300025261 Bacteria 293905
154 Ga0209233_1000114 3300025261 Bacteria 246083
155 Ga0209233_1001024 3300025261 Bacteria 11861
156 Ga0209233_1003709 3300025261 Bacteria 5337
157 Ga0209233_1012067 3300025261 Bacteria 2519
158 Ga0209455_1000078 3300025272 Bacteria 270237
159 Ga0209455_1000533 3300025272 Bacteria 26430
160 Ga0207696_1000027 3300025711 Bacteria 412783
161 Ga0207696_1000148 3300025711 Bacteria 120559
162 Ga0207696_1000511 3300025711 Bacteria 32258
163 Ga0207696_1000704 3300025711 Bacteria 22843
164 Ga0207655_1000037 3300025728 Bacteria 354473
165 Ga0207655_1000397 3300025728 Bacteria 60486
166 Ga0207655_1000586 3300025728 Bacteria 44995
167 Ga0207655_1000852 3300025728 Bacteria 32517
168 Ga0207655_1027261 3300025728 Bacteria 2724
169 Ga0207713_1084657 3300025735 Bacteria 1131
170 Ga0207680_10000001 3300025903 Bacteria 1091453
171 Ga0207680_10909167 3300025903 Bacteria 631
172 Ga0207647_10056564 3300025904 Bacteria 2406
173 Ga0207707_10047624 3300025912 Bacteria 3733
174 Ga0207707_10359399 3300025912 Bacteria 1254
175 Ga0207695_10000082 3300025913 Bacteria 284333
176 Ga0207695_10000965 3300025913 Bacteria 51285
177 Ga0207671_10004733 3300025914 Bacteria 12846
178 Ga0207657_10000350 3300025919 Bacteria 48975
179 Ga0207649_10041030 3300025920 Bacteria 2816
180 Ga0207694_10000021 3300025924 Bacteria 300246
181 Ga0207694_10000322 3300025924 Bacteria 45212
182 Ga0207694_10000577 3300025924 Bacteria 33120
183 Ga0207690_10001117 3300025932 Bacteria 17115
184 Ga0207709_10358836 3300025935 Bacteria 1103
185 Ga0207670_10000817 3300025936 Bacteria 16282
186 Ga0207679_10000678 3300025945 Bacteria 22830
187 Ga0207667_10238095 3300025949 Bacteria 1863
188 Ga0207640_10008146 3300025981 Bacteria 5806
189 Ga0207640_10345582 3300025981 Bacteria 1193
190 Ga0207658_10032050 3300025986 Bacteria 3737
191 Ga0207678_10062149 3300026067 Bacteria 3211
192 Ga0207678_10089455 3300026067 Bacteria 2632
193 Ga0207641_10609208 3300026088 Bacteria 1070
194 Ga0207683_11925427 3300026121 Bacteria 540
195 Ga0207698_10001951 3300026142 Bacteria 12112
196 Ga0207698_10020065 3300026142 Bacteria 4592
197 Ga0207698_10538074 3300026142 Bacteria 1143
198 Ga0209371_1008728 3300027312 Bacteria 3319
199 Ga0268266_10000148 3300028379 Bacteria 135001
200 Ga0268265_10058319 3300028380 Bacteria 2947
201 Ga0268265_10541718 3300028380 Bacteria 1103
202 Ga0268256_1009172 3300030500 Bacteria 3319
203 Ga0265331_10020286 3300031250 Bacteria 3416
204 Ga0265327_10000044 3300031251 Bacteria 284808
205 Ga0307509_10078356 3300031507 Bacteria 3424
206 Ga0307413_10058551 3300031824 Bacteria 2362
207 Ga0307414_10018941 3300032004 Bacteria 4253
208 Ga0307414_10183584 3300032004 Bacteria 1685
209 Ga0307414_10429442 3300032004 Bacteria 1154
210 Ga0307507_10032183 3300033179 Bacteria 5482
211 Ga0307510_10000211 3300033180 Bacteria 51532
212 Ga0395899_0015932 3300037312 Bacteria 5733
213 Ga0395899_0043662 3300037312 Bacteria 3343
214 Ga0395899_0144606 3300037312 Bacteria 1689
215 Ga0395900_0002239 3300037418 Bacteria 21536
216 Ga0395900_0604814 3300037418 Bacteria 1036
217 Ga0395898_0009426 3300037466 Bacteria 10254
218 Ga0395898_0042615 3300037466 Bacteria 4476
219 Ga0395905_0702135 3300037471 Bacteria 914
220 Ga0395901_0020418 3300038443 Bacteria 6780
221 Ga0395901_0047753 3300038443 Bacteria 4444
222 Ga0400483_131680 3300039062 Bacteria 2529
223 Ga0439438_001880 3300041405 Bacteria 9193
224 Ga0439447_022409 3300041407 Bacteria 1655
225 Ga0451793_1342519 3300041452 Bacteria 2681
226 Ga0451853_1760646 3300041512 Bacteria 536
227 Ga0439456_050423 3300042013 Bacteria 909
228 Ga0439459_0036843 3300042438 Bacteria 1022
229 Ga0450893_0005583 3300042532 Bacteria 2021
230 Ga0466963_0926210 3300044694 Bacteria 614
231 Ga0495638_0000307 3300046460 Bacteria 63133
232 Ga0495638_0000957 3300046460 Bacteria 29286
233 Ga0495650_0000004 3300046471 Bacteria 779487
234 Ga0495650_0000008 3300046471 Bacteria 688246
235 Ga0495650_0000092 3300046471 Bacteria 224681
236 Ga0495650_0000126 3300046471 Bacteria 178143
237 Ga0495650_0000218 3300046471 Bacteria 120583
238 Ga0495606_0000393 3300046507 Bacteria 73949
239 Ga0495606_0067317 3300046507 Bacteria 2268
240 Ga0495632_0045028 3300046519 Bacteria 2200
241 Ga0495640_0748538 3300046533 Bacteria 584
242 Ga0495598_0043074 3300046537 Bacteria 1328
243 Ga0495621_0014001 3300046539 Bacteria 2532
244 Ga0495597_0141881 3300046542 Bacteria 990
245 Ga0495622_0001515 3300046557 Bacteria 11612
246 Ga0495625_0008941 3300046660 Bacteria 8464
247 Ga0495625_0046308 3300046660 Bacteria 3139
248 Ga0495649_0005316 3300046694 Bacteria 8214
249 Ga0495660_0000022 3300046810 Bacteria 284337
250 Ga0495660_0000075 3300046810 Bacteria 106495
251 Ga0495681_0016591 3300047470 Bacteria 4119
252 Ga0495681_0041271 3300047470 Bacteria 2241
253 Ga0496103_0155834 3300048906 Bacteria 1464
254 Ga0496104_0002690 3300048907 Bacteria 15307
255 Ga0496104_0040094 3300048907 Bacteria 4388
256 Ga0496104_0120079 3300048907 Bacteria 2524
257 Ga0496104_0622265 3300048907 Bacteria 989
258 Ga0496113_0002846 3300048916 Bacteria 10178
259 Ga0496114_0089579 3300048917 Bacteria 2611
260 Ga0496115_0000145 3300048918 Bacteria 65472
261 Ga0496115_0001583 3300048918 Bacteria 16330
262 Ga0496115_0035921 3300048918 Bacteria 3922
263 Ga0496115_0114620 3300048918 Bacteria 2215
264 Ga0496116_0000048 3300048919 Bacteria 314562
265 Ga0496116_0000188 3300048919 Bacteria 123223
266 Ga0496116_0000671 3300048919 Bacteria 44585
267 Ga0496117_0006664 3300048920 Bacteria 11576
268 Ga0496117_0029819 3300048920 Bacteria 4199
269 Ga0496117_0030474 3300048920 Bacteria 4139
270 Ga0496117_0187013 3300048920 Bacteria 1184
271 Ga0496118_0000796 3300048921 Bacteria 50371
272 Ga0496118_0006725 3300048921 Bacteria 12529
273 Ga0496118_0007206 3300048921 Bacteria 11880
274 Ga0496118_0026576 3300048921 Bacteria 4925
275 Ga0496118_0089447 3300048921 Bacteria 2125
276 Ga0496118_0324291 3300048921 Bacteria 834
277 Ga0496118_0412179 3300048921 Bacteria 698
278 Ga0496119_0010371 3300048922 Bacteria 7847
279 Ga0496119_0056206 3300048922 Bacteria 2385
280 Ga0496120_0001940 3300048923 Bacteria 22692
281 Ga0496120_0004936 3300048923 Bacteria 10844
282 Ga0496120_0009048 3300048923 Bacteria 7115
283 Ga0496121_0010022 3300048924 Bacteria 10765
284 Ga0496121_0051872 3300048924 Bacteria 3451
285 Ga0496121_0087411 3300048924 Bacteria 2447
286 Ga0496122_0000070 3300048925 Bacteria 223198
287 Ga0496122_0000086 3300048925 Bacteria 207993
288 Ga0496123_0000021 3300048926 Bacteria 378760
289 Ga0496123_0000183 3300048926 Bacteria 126284
290 Ga0496123_0339798 3300048926 Bacteria 702
291 Ga0496124_0000092 3300048927 Bacteria 189213
292 Ga0496124_0000169 3300048927 Bacteria 131658
293 Ga0496125_0000056 3300048928 Bacteria 271016
294 Ga0496125_0000103 3300048928 Bacteria 201675
295 Ga0496125_0030851 3300048928 Bacteria 4787
296 Ga0496126_0000137 3300048929 Bacteria 167415
297 Ga0496126_0000229 3300048929 Bacteria 120333
298 Ga0496126_0003502 3300048929 Bacteria 19805
299 Ga0496126_0021423 3300048929 Bacteria 6313
300 Ga0495678_100566 3300049459 Bacteria 1002
301 Ga0495682_0011581 3300049460 Bacteria 3392
302 Ga0501036_0150922 3300049572 Bacteria 1960
303 Ga0501038_0950289 3300049574 Bacteria 633
304 Ga0501039_0360805 3300049575 Bacteria 1142
305 Ga0501043_1103811 3300049579 Bacteria 560
306 Ga0501048_0225441 3300049582 Bacteria 1330
307 Ga0501070_1107308 3300049586 Bacteria 611
308 Ga0501282_001933 3300049778 Bacteria 2284
309 Ga0501035_0158949 3300049822 Bacteria 1957
310 Ga0501035_0354811 3300049822 Bacteria 1226
311 Ga0501044_0655401 3300049823 Bacteria 938
312 nmdc:mga00v17_8836_c3 3300050491 Bacteria 2857
313 Ga0500646_0015370 3300053090 Bacteria 1992
314 Ga0500595_025592 3300053119 Bacteria 2043
315 Ga0500564_010352 3300053138 Bacteria 4089
316 Ga0500619_021367 3300053154 Bacteria 1864
317 Ga0500661_004976 3300055283 Bacteria 2490

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047470 Ga0495681_0041271 Ga0495681_0041271_1177_1611 134
2 iso_pu_bacteria 2888373701 2888373702 139
3 iso_pu_bacteria 2521172590 2521561119 140
4 iso_pu_bacteria 2818991449 2819617499 140
5 iso_pu_bacteria 2904439833 2904442249 140
6 iso_pu_bacteria 2904530477 2904533528 140
7 iso_pu_bacteria 2904584206 2904586483 140
8 iso_pu_bacteria 2904589729 2904591704 140
9 iso_pu_bacteria 2904601388 2904602143 140
10 iso_pu_bacteria 2919079590 2919083518 140
11 3300009036 Ga0105244_10000460 Ga0105244_1000046010 142
12 3300025728 Ga0207655_1000037 Ga0207655_1000037110 142
13 3300048920 Ga0496117_0029819 Ga0496117_0029819_3508_3936 142
14 iso_pu_bacteria 2667528173 2671110732 142
15 iso_pu_bacteria 2904474040 2904479159 142
16 iso_pu_bacteria 2904504865 2904508939 142
17 iso_pu_bacteria 2919150387 2919155463 142
18 iso_pu_bacteria 2927143783 2927148877 142
19 iso_pu_bacteria 2952252522 2952254708 142
20 3300005338 Ga0068868_100327614 Ga0068868_1003276142 143
21 3300005547 Ga0070693_101497538 Ga0070693_1014975381 143
22 3300005577 Ga0068857_100452284 Ga0068857_1004522841 143
23 3300005578 Ga0068854_100276240 Ga0068854_1002762402 143
24 3300005616 Ga0068852_100437771 Ga0068852_1004377711 143
25 3300006051 Ga0075364_10051861 Ga0075364_100518613 143
26 3300009148 Ga0105243_10149211 Ga0105243_101492114 143
27 3300025935 Ga0207709_10358836 Ga0207709_103588363 143
28 3300025981 Ga0207640_10345582 Ga0207640_103455822 143
29 3300026142 Ga0207698_10538074 Ga0207698_105380742 143
30 3300050491 nmdc:mga00v17_8836_c3 nmdc:mga00v17_8836_c3_2190_2624 143
31 iso_pu_bacteria 2739367700 2739733705 143
32 iso_pu_bacteria 2884411467 2884411771 143
33 iso_pu_bacteria 2928963466 2928966625 143
34 3300005339 Ga0070660_100000501 Ga0070660_1000005013 144
35 3300005344 Ga0070661_100010308 Ga0070661_1000103084 144
36 3300005366 Ga0070659_100017119 Ga0070659_1000171192 144
37 3300005458 Ga0070681_10132832 Ga0070681_101328323 144
38 3300005564 Ga0070664_100035139 Ga0070664_1000351393 144
39 3300005578 Ga0068854_100002409 Ga0068854_10000240910 144
40 3300005616 Ga0068852_100001672 Ga0068852_10000167211 144
41 3300009036 Ga0105244_10020741 Ga0105244_100207413 144
42 3300009093 Ga0105240_10048589 Ga0105240_100485894 144
43 3300009545 Ga0105237_10003535 Ga0105237_1000353518 144
44 3300009551 Ga0105238_10000004 Ga0105238_1000000492 144
45 3300010375 Ga0105239_10003999 Ga0105239_1000399918 144
46 3300013307 Ga0157372_10095601 Ga0157372_100956012 144
47 3300015261 Ga0182006_1002353 Ga0182006_100235311 144
48 3300025728 Ga0207655_1027261 Ga0207655_10272613 144
49 3300025912 Ga0207707_10047624 Ga0207707_100476244 144
50 3300025913 Ga0207695_10000965 Ga0207695_1000096526 144
51 3300025914 Ga0207671_10004733 Ga0207671_100047337 144
52 3300025919 Ga0207657_10000350 Ga0207657_100003505 144
53 3300025924 Ga0207694_10000021 Ga0207694_1000002110 144
54 3300025932 Ga0207690_10001117 Ga0207690_1000111713 144
55 3300025945 Ga0207679_10000678 Ga0207679_100006789 144
56 3300025949 Ga0207667_10238095 Ga0207667_102380952 144
57 3300025981 Ga0207640_10008146 Ga0207640_100081464 144
58 3300026142 Ga0207698_10001951 Ga0207698_100019518 144
59 3300031507 Ga0307509_10078356 Ga0307509_100783562 144
60 3300033179 Ga0307507_10032183 Ga0307507_100321834 144
61 3300037312 Ga0395899_0043662 Ga0395899_0043662_130_567 144
62 3300037312 Ga0395899_0144606 Ga0395899_0144606_1073_1510 144
63 3300037418 Ga0395900_0002239 Ga0395900_0002239_16006_16443 144
64 3300037418 Ga0395900_0604814 Ga0395900_0604814_79_516 144
65 3300037466 Ga0395898_0009426 Ga0395898_0009426_1644_2081 144
66 3300037466 Ga0395898_0042615 Ga0395898_0042615_2667_3104 144
67 3300037471 Ga0395905_0702135 Ga0395905_0702135_407_844 144
68 3300038443 Ga0395901_0020418 Ga0395901_0020418_5137_5574 144
69 3300038443 Ga0395901_0047753 Ga0395901_0047753_2731_3168 144
70 3300046537 Ga0495598_0043074 Ga0495598_0043074_832_1269 144
71 3300046539 Ga0495621_0014001 Ga0495621_0014001_1258_1695 144
72 3300048906 Ga0496103_0155834 Ga0496103_0155834_490_927 144
73 3300048907 Ga0496104_0120079 Ga0496104_0120079_1388_1825 144
74 3300049575 Ga0501039_0360805 Ga0501039_0360805_534_971 144
75 3300039062 Ga0400483_131680 Ga0400483_131680_1895_2335 145
76 3300002067 JGI24735J21928_10024388 JGI24735J21928_100243882 146
77 3300002737 JGI25162J39368_1000478 JGI25162J39368_100047813 146
78 3300002771 JGI25163J39215_1000393 JGI25163J39215_10003936 146
79 3300002772 JGI25164J39214_1000325 JGI25164J39214_100032513 146
80 3300003751 Ga0055538_1000235 Ga0055538_100023513 146
81 3300003752 Ga0055539_1000270 Ga0055539_100027013 146
82 3300003756 Ga0055533_1000261 Ga0055533_100026113 146
83 3300003759 Ga0055525_1000362 Ga0055525_100036213 146
84 3300003841 Ga0055541_1000170 Ga0055541_100017013 146
85 3300005289 Ga0065704_10001152 Ga0065704_100011525 146
86 3300005327 Ga0070658_10006834 Ga0070658_100068341 146
87 3300005331 Ga0070670_101041079 Ga0070670_1010410791 146
88 3300005335 Ga0070666_10000268 Ga0070666_100002686 146
89 3300005344 Ga0070661_100092836 Ga0070661_1000928363 146
90 3300005347 Ga0070668_100461971 Ga0070668_1004619711 146
91 3300005367 Ga0070667_100165505 Ga0070667_1001655053 146
92 3300005456 Ga0070678_101078128 Ga0070678_1010781281 146
93 3300005458 Ga0070681_10326211 Ga0070681_103262112 146
94 3300005466 Ga0070685_10169847 Ga0070685_101698471 146
95 3300005548 Ga0070665_100005112 Ga0070665_10000511211 146
96 3300005843 Ga0068860_100018895 Ga0068860_1000188952 146
97 3300005844 Ga0068862_100453619 Ga0068862_1004536192 146
98 3300009036 Ga0105244_10006066 Ga0105244_100060662 146
99 3300009092 Ga0105250_10000073 Ga0105250_1000007329 146
100 3300009551 Ga0105238_10000428 Ga0105238_1000042830 146
101 3300009551 Ga0105238_10640281 Ga0105238_106402812 146
102 3300013102 Ga0157371_10000098 Ga0157371_1000009814 146
103 3300013306 Ga0163162_10005941 Ga0163162_100059419 146
104 3300013306 Ga0163162_10200727 Ga0163162_102007273 146
105 3300015265 Ga0182005_1048061 Ga0182005_10480612 146
106 3300025207 Ga0209760_100073 Ga0209760_10007362 146
107 3300025224 Ga0209784_100001 Ga0209784_1000011512 146
108 3300025225 Ga0209566_100001 Ga0209566_1000011512 146
109 3300025226 Ga0209674_100002 Ga0209674_1000021512 146
110 3300025230 Ga0209563_100002 Ga0209563_10000247 146
111 3300025231 Ga0207427_100032 Ga0207427_10003247 146
112 3300025233 Ga0209437_100001 Ga0209437_10000147 146
113 3300025253 Ga0209677_100002 Ga0209677_10000247 146
114 3300025261 Ga0209233_1003709 Ga0209233_10037094 146
115 3300025711 Ga0207696_1000148 Ga0207696_100014838 146
116 3300025711 Ga0207696_1000704 Ga0207696_100070413 146
117 3300025728 Ga0207655_1000586 Ga0207655_100058612 146
118 3300025903 Ga0207680_10000001 Ga0207680_10000001771 146
119 3300025912 Ga0207707_10359399 Ga0207707_103593992 146
120 3300025924 Ga0207694_10000322 Ga0207694_1000032238 146
121 3300025986 Ga0207658_10032050 Ga0207658_100320502 146
122 3300026088 Ga0207641_10609208 Ga0207641_106092082 146
123 3300026121 Ga0207683_11925427 Ga0207683_119254271 146
124 3300028379 Ga0268266_10000148 Ga0268266_1000014831 146
125 3300028380 Ga0268265_10541718 Ga0268265_105417182 146
126 3300031250 Ga0265331_10020286 Ga0265331_100202862 146
127 3300031251 Ga0265327_10000044 Ga0265327_1000004423 146
128 3300033180 Ga0307510_10000211 Ga0307510_1000021125 146
129 3300041512 Ga0451853_1760646 Ga0451853_1760646_66_509 146
130 3300046471 Ga0495650_0000126 Ga0495650_0000126_141681_142121 146
131 3300046471 Ga0495650_0000218 Ga0495650_0000218_97035_97478 146
132 3300046507 Ga0495606_0067317 Ga0495606_0067317_1544_1987 146
133 3300046660 Ga0495625_0008941 Ga0495625_0008941_3859_4302 146
134 3300046810 Ga0495660_0000075 Ga0495660_0000075_67489_67929 146
135 3300048907 Ga0496104_0040094 Ga0496104_0040094_2555_2995 146
136 3300048919 Ga0496116_0000048 Ga0496116_0000048_17691_18131 146
137 3300048920 Ga0496117_0006664 Ga0496117_0006664_4658_5098 146
138 3300048921 Ga0496118_0000796 Ga0496118_0000796_24686_25126 146
139 3300048921 Ga0496118_0026576 Ga0496118_0026576_3791_4231 146
140 3300048921 Ga0496118_0412179 Ga0496118_0412179_32_475 146
141 3300048922 Ga0496119_0056206 Ga0496119_0056206_1231_1671 146
142 3300048923 Ga0496120_0009048 Ga0496120_0009048_627_1067 146
143 3300048924 Ga0496121_0051872 Ga0496121_0051872_2441_2884 146
144 3300048925 Ga0496122_0000086 Ga0496122_0000086_64297_64737 146
145 3300048926 Ga0496123_0000021 Ga0496123_0000021_64443_64883 146
146 3300048927 Ga0496124_0000092 Ga0496124_0000092_109396_109836 146
147 3300048928 Ga0496125_0000103 Ga0496125_0000103_14849_15289 146
148 3300048928 Ga0496125_0030851 Ga0496125_0030851_3152_3595 146
149 3300048929 Ga0496126_0000229 Ga0496126_0000229_10334_10774 146
150 3300049572 Ga0501036_0150922 Ga0501036_0150922_808_1251 146
151 3300049574 Ga0501038_0950289 Ga0501038_0950289_80_523 146
152 3300049579 Ga0501043_1103811 Ga0501043_1103811_77_520 146
153 3300049582 Ga0501048_0225441 Ga0501048_0225441_336_779 146
154 3300049586 Ga0501070_1107308 Ga0501070_1107308_19_462 146
155 3300049822 Ga0501035_0158949 Ga0501035_0158949_1443_1886 146
156 3300049822 Ga0501035_0354811 Ga0501035_0354811_671_1114 146
157 3300049823 Ga0501044_0655401 Ga0501044_0655401_346_789 146
158 3300053090 Ga0500646_0015370 Ga0500646_0015370_210_653 146
159 3300053138 Ga0500564_010352 Ga0500564_010352_3333_3776 146
160 3300053154 Ga0500619_021367 Ga0500619_021367_1305_1748 146
161 3300055283 Ga0500661_004976 Ga0500661_004976_1180_1623 146
162 iso_pu_bacteria 2537561728 2538427948 146
163 iso_pu_bacteria 2585427591 2585826418 146
164 iso_pu_bacteria 2585427592 2585830548 146
165 iso_pu_bacteria 2599185169 2599413640 146
166 iso_pu_bacteria 2600255254 2601526305 146
167 iso_pu_bacteria 2600255255 2601531329 146
168 iso_pu_bacteria 2600255280 2601618163 146
169 iso_pu_bacteria 2600255281 2601623186 146
170 iso_pu_bacteria 2600255287 2601644067 146
171 iso_pu_bacteria 2600255288 2601651568 146
172 iso_pu_bacteria 2600255289 2601656599 146
173 iso_pu_bacteria 2600255290 2601661616 146
174 iso_pu_bacteria 2600255291 2601663892 146
175 iso_pu_bacteria 2600255298 2601696227 146
176 iso_pu_bacteria 2600255299 2601701524 146
177 iso_pu_bacteria 2600255300 2601709418 146
178 iso_pu_bacteria 2600255301 2601714423 146
179 iso_pu_bacteria 2600255302 2601719469 146
180 iso_pu_bacteria 2600255303 2601721251 146
181 iso_pu_bacteria 2600255304 2601729377 146
182 iso_pu_bacteria 2600255305 2601734412 146
183 iso_pu_bacteria 2600255306 2601739401 146
184 iso_pu_bacteria 2600255307 2601744478 146
185 iso_pu_bacteria 2600255309 2601755043 146
186 iso_pu_bacteria 2600255392 2602022319 146
187 iso_pu_bacteria 2602042052 2603661280 146
188 iso_pu_bacteria 2602042053 2603666555 146
189 iso_pu_bacteria 2602042103 2603836761 146
190 iso_pu_bacteria 2602042104 2603841840 146
191 iso_pu_bacteria 2602042105 2603846902 146
192 iso_pu_bacteria 2602042106 2603851984 146
193 iso_pu_bacteria 2602042110 2603869544 146
194 iso_pu_bacteria 2602042111 2603877367 146
195 iso_pu_bacteria 2603880178 2606046730 146
196 iso_pu_bacteria 2603880184 2606070987 146
197 iso_pu_bacteria 2603880202 2606144414 146
198 iso_pu_bacteria 2603880211 2606174632 146
199 iso_pu_bacteria 2667528173 2671106710 146
200 iso_pu_bacteria 2675903046 2676410301 146
201 iso_pu_bacteria 2791354903 2791925348 146
202 iso_pu_bacteria 2846540461 2846544012 146
203 iso_pu_bacteria 2855195626 2855199870 146
204 iso_pu_bacteria 2858466076 2858466099 146
205 iso_pu_bacteria 2871272651 2871273491 146
206 iso_pu_bacteria 2871282230 2871282826 146
207 iso_pu_bacteria 2900051742 2900056332 146
208 iso_pu_bacteria 2904474040 2904474142 146
209 iso_pu_bacteria 2904504865 2904507241 146
210 iso_pu_bacteria 2908669403 2908672825 146
211 iso_pu_bacteria 2919150387 2919150489 146
212 iso_pu_bacteria 2927143783 2927145362 146
213 iso_pu_bacteria 8055693939 8055697872 146
214 3300002705 JGI25156J39149_1018861 JGI25156J39149_10188611 147
215 3300002772 JGI25164J39214_1000817 JGI25164J39214_100081710 147
216 3300003214 JGI25165J46597_1010250 JGI25165J46597_10102502 147
217 3300003751 Ga0055538_1001424 Ga0055538_10014241 147
218 3300003759 Ga0055525_1000306 Ga0055525_100030627 147
219 3300003760 Ga0055527_1000060 Ga0055527_100006055 147
220 3300003761 Ga0055535_1000412 Ga0055535_100041227 147
221 3300003762 Ga0055542_1000171 Ga0055542_100017142 147
222 3300003763 Ga0055529_1000388 Ga0055529_100038825 147
223 3300005340 Ga0070689_100007867 Ga0070689_1000078678 147
224 3300005344 Ga0070661_100119214 Ga0070661_1001192143 147
225 3300005356 Ga0070674_100475345 Ga0070674_1004753452 147
226 3300005365 Ga0070688_100181839 Ga0070688_1001818392 147
227 3300005365 Ga0070688_100939571 Ga0070688_1009395711 147
228 3300005455 Ga0070663_100121070 Ga0070663_1001210703 147
229 3300005455 Ga0070663_100124402 Ga0070663_1001244023 147
230 3300005466 Ga0070685_10001206 Ga0070685_100012063 147
231 3300005466 Ga0070685_10002262 Ga0070685_100022627 147
232 3300005843 Ga0068860_100279000 Ga0068860_1002790003 147
233 3300006358 Ga0068871_100822181 Ga0068871_1008221812 147
234 3300009551 Ga0105238_10210839 Ga0105238_102108391 147
235 3300013105 Ga0157369_10585474 Ga0157369_105854742 147
236 3300013306 Ga0163162_10104340 Ga0163162_101043403 147
237 3300014325 Ga0163163_10790746 Ga0163163_107907462 147
238 3300014969 Ga0157376_10177338 Ga0157376_101773382 147
239 3300015687 Ga0183368_1007 Ga0183368_100763 147
240 3300025206 Ga0209435_110360 Ga0209435_1103602 147
241 3300025226 Ga0209674_100037 Ga0209674_100037300 147
242 3300025228 Ga0209672_100043 Ga0209672_100043161 147
243 3300025228 Ga0209672_101041 Ga0209672_1010413 147
244 3300025230 Ga0209563_100062 Ga0209563_100062152 147
245 3300025231 Ga0207427_100387 Ga0207427_1003877 147
246 3300025233 Ga0209437_100132 Ga0209437_100132102 147
247 3300025242 Ga0209258_100076 Ga0209258_100076161 147
248 3300025242 Ga0209258_101940 Ga0209258_1019403 147
249 3300025254 Ga0209148_1000082 Ga0209148_1000082161 147
250 3300025256 Ga0209759_1008238 Ga0209759_10082382 147
251 3300025261 Ga0209233_1000114 Ga0209233_1000114155 147
252 3300025261 Ga0209233_1012067 Ga0209233_10120673 147
253 3300025272 Ga0209455_1000078 Ga0209455_1000078161 147
254 3300025903 Ga0207680_10909167 Ga0207680_109091671 147
255 3300025904 Ga0207647_10056564 Ga0207647_100565643 147
256 3300025913 Ga0207695_10000082 Ga0207695_1000008218 147
257 3300025920 Ga0207649_10041030 Ga0207649_100410303 147
258 3300025924 Ga0207694_10000577 Ga0207694_1000057711 147
259 3300025936 Ga0207670_10000817 Ga0207670_100008172 147
260 3300026067 Ga0207678_10062149 Ga0207678_100621493 147
261 3300026067 Ga0207678_10089455 Ga0207678_100894553 147
262 3300026142 Ga0207698_10020065 Ga0207698_100200654 147
263 3300028380 Ga0268265_10058319 Ga0268265_100583192 147
264 3300032004 Ga0307414_10183584 Ga0307414_101835843 147
265 3300037312 Ga0395899_0015932 Ga0395899_0015932_1398_1844 147
266 3300041452 Ga0451793_1342519 Ga0451793_1342519_1200_1661 147
267 3300042438 Ga0439459_0036843 Ga0439459_0036843_224_682 147
268 3300044694 Ga0466963_0926210 Ga0466963_0926210_147_602 147
269 3300046460 Ga0495638_0000307 Ga0495638_0000307_43306_43764 147
270 3300046460 Ga0495638_0000957 Ga0495638_0000957_9478_9936 147
271 3300046471 Ga0495650_0000092 Ga0495650_0000092_43553_44011 147
272 3300046507 Ga0495606_0000393 Ga0495606_0000393_44349_44807 147
273 3300046542 Ga0495597_0141881 Ga0495597_0141881_425_883 147
274 3300046557 Ga0495622_0001515 Ga0495622_0001515_1929_2387 147
275 3300046660 Ga0495625_0046308 Ga0495625_0046308_1944_2402 147
276 3300046694 Ga0495649_0005316 Ga0495649_0005316_2816_3274 147
277 3300048907 Ga0496104_0622265 Ga0496104_0622265_176_631 147
278 3300048916 Ga0496113_0002846 Ga0496113_0002846_8925_9380 147
279 3300048917 Ga0496114_0089579 Ga0496114_0089579_674_1132 147
280 3300048918 Ga0496115_0000145 Ga0496115_0000145_44382_44840 147
281 3300048918 Ga0496115_0001583 Ga0496115_0001583_1539_1994 147
282 3300048918 Ga0496115_0035921 Ga0496115_0035921_939_1397 147
283 3300048920 Ga0496117_0187013 Ga0496117_0187013_178_627 147
284 3300048921 Ga0496118_0324291 Ga0496118_0324291_374_823 147
285 3300048924 Ga0496121_0087411 Ga0496121_0087411_928_1386 147
286 3300048926 Ga0496123_0339798 Ga0496123_0339798_150_605 147
287 3300048929 Ga0496126_0021423 Ga0496126_0021423_39_497 147
288 3300049459 Ga0495678_100566 Ga0495678_100566_304_762 147
289 3300049460 Ga0495682_0011581 Ga0495682_0011581_1005_1463 147
290 3300053119 Ga0500595_025592 Ga0500595_025592_670_1119 147
291 3300005337 Ga0070682_100798630 Ga0070682_1007986301 148
292 3300014497 Ga0182008_10181457 Ga0182008_101814572 148
293 3300002737 JGI25162J39368_1004671 JGI25162J39368_10046713 149
294 3300003762 Ga0055542_1000346 Ga0055542_100034632 149
295 3300009174 Ga0105241_10658775 Ga0105241_106587751 149
296 3300025231 Ga0207427_101610 Ga0207427_1016109 149
297 3300025233 Ga0209437_100316 Ga0209437_10031622 149
298 3300025242 Ga0209258_105144 Ga0209258_1051443 149
299 3300025250 Ga0209026_1013620 Ga0209026_10136201 149
300 3300025254 Ga0209148_1000055 Ga0209148_1000055276 149
301 3300031824 Ga0307413_10058551 Ga0307413_100585512 149
302 3300032004 Ga0307414_10018941 Ga0307414_100189413 149
303 3300032004 Ga0307414_10429442 Ga0307414_104294422 149
304 3300046533 Ga0495640_0748538 Ga0495640_0748538_38_493 149
305 2162886007 SwRhRL2b_contig_2263729 SwRhRL2b_0792.00005020 150
306 3300002737 JGI25162J39368_1000031 JGI25162J39368_1000031103 150
307 3300002737 JGI25162J39368_1000592 JGI25162J39368_100059215 150
308 3300002741 JGI25157J39369_1000727 JGI25157J39369_10007279 150
309 3300002771 JGI25163J39215_1000033 JGI25163J39215_100003349 150
310 3300002771 JGI25163J39215_1000094 JGI25163J39215_100009410 150
311 3300002771 JGI25163J39215_1000441 JGI25163J39215_10004413 150
312 3300002772 JGI25164J39214_1000050 JGI25164J39214_100005010 150
313 3300002772 JGI25164J39214_1000544 JGI25164J39214_10005448 150
314 3300003214 JGI25165J46597_1000706 JGI25165J46597_100070615 150
315 3300003320 rootH2_10085860 rootH2_100858601 150
316 3300003751 Ga0055538_1000004 Ga0055538_1000004103 150
317 3300003752 Ga0055539_1000004 Ga0055539_1000004455 150
318 3300003756 Ga0055533_1000007 Ga0055533_1000007103 150
319 3300003759 Ga0055525_1000007 Ga0055525_1000007103 150
320 3300003761 Ga0055535_1000685 Ga0055535_10006858 150
321 3300003762 Ga0055542_1000706 Ga0055542_100070615 150
322 3300003763 Ga0055529_1000624 Ga0055529_100062415 150
323 3300003841 Ga0055541_1000004 Ga0055541_1000004103 150
324 3300005289 Ga0065704_10000928 Ga0065704_100009283 150
325 3300005937 Ga0081455_10004827 Ga0081455_1000482710 150
326 3300006946 Ga0079104_1041666 Ga0079104_10416662 150
327 3300009011 Ga0105251_10048838 Ga0105251_100488384 150
328 3300009036 Ga0105244_10000205 Ga0105244_100002057 150
329 3300009036 Ga0105244_10000766 Ga0105244_1000076617 150
330 3300009092 Ga0105250_10000098 Ga0105250_1000009867 150
331 3300009092 Ga0105250_10000503 Ga0105250_1000050317 150
332 3300013102 Ga0157371_10000272 Ga0157371_1000027248 150
333 3300013104 Ga0157370_10008932 Ga0157370_1000893211 150
334 3300013306 Ga0163162_10010172 Ga0163162_100101723 150
335 3300025207 Ga0209760_100006 Ga0209760_100006182 150
336 3300025207 Ga0209760_100441 Ga0209760_1004418 150
337 3300025224 Ga0209784_100001 Ga0209784_100001101 150
338 3300025224 Ga0209784_100300 Ga0209784_10030016 150
339 3300025225 Ga0209566_100001 Ga0209566_100001101 150
340 3300025226 Ga0209674_100002 Ga0209674_100002101 150
341 3300025228 Ga0209672_111371 Ga0209672_1113712 150
342 3300025230 Ga0209563_100008 Ga0209563_100008102 150
343 3300025231 Ga0207427_100002 Ga0207427_1000021178 150
344 3300025231 Ga0207427_100389 Ga0207427_1003898 150
345 3300025233 Ga0209437_100114 Ga0209437_10011498 150
346 3300025233 Ga0209437_100532 Ga0209437_10053215 150
347 3300025242 Ga0209258_100526 Ga0209258_10052619 150
348 3300025246 Ga0209646_1001431 Ga0209646_10014316 150
349 3300025250 Ga0209026_1000531 Ga0209026_100053115 150
350 3300025253 Ga0209677_100004 Ga0209677_100004102 150
351 3300025254 Ga0209148_1000047 Ga0209148_100004770 150
352 3300025256 Ga0209759_1000787 Ga0209759_10007878 150
353 3300025261 Ga0209233_1000100 Ga0209233_1000100200 150
354 3300025261 Ga0209233_1001024 Ga0209233_100102411 150
355 3300025272 Ga0209455_1000533 Ga0209455_100053315 150
356 3300025711 Ga0207696_1000027 Ga0207696_1000027351 150
357 3300025711 Ga0207696_1000511 Ga0207696_10005118 150
358 3300025728 Ga0207655_1000397 Ga0207655_100039758 150
359 3300025728 Ga0207655_1000852 Ga0207655_10008529 150
360 3300025735 Ga0207713_1084657 Ga0207713_10846572 150
361 3300027312 Ga0209371_1008728 Ga0209371_10087282 150
362 3300030500 Ga0268256_1009172 Ga0268256_10091724 150
363 3300041405 Ga0439438_001880 Ga0439438_001880_8320_8838 150
364 3300041407 Ga0439447_022409 Ga0439447_022409_737_1189 150
365 3300042013 Ga0439456_050423 Ga0439456_050423_186_638 150
366 3300042532 Ga0450893_0005583 Ga0450893_0005583_903_1355 150
367 3300046471 Ga0495650_0000004 Ga0495650_0000004_109160_109612 150
368 3300046471 Ga0495650_0000008 Ga0495650_0000008_12133_12654 150
369 3300046519 Ga0495632_0045028 Ga0495632_0045028_860_1312 150
370 3300046810 Ga0495660_0000022 Ga0495660_0000022_109416_109868 150
371 3300047470 Ga0495681_0016591 Ga0495681_0016591_3201_3653 150
372 3300048907 Ga0496104_0002690 Ga0496104_0002690_1477_1929 150
373 3300048918 Ga0496115_0114620 Ga0496115_0114620_1394_1897 150
374 3300048919 Ga0496116_0000188 Ga0496116_0000188_109409_109861 150
375 3300048919 Ga0496116_0000671 Ga0496116_0000671_31889_32341 150
376 3300048920 Ga0496117_0030474 Ga0496117_0030474_862_1314 150
377 3300048921 Ga0496118_0006725 Ga0496118_0006725_8027_8530 150
378 3300048921 Ga0496118_0007206 Ga0496118_0007206_102_554 150
379 3300048921 Ga0496118_0089447 Ga0496118_0089447_215_667 150
380 3300048922 Ga0496119_0010371 Ga0496119_0010371_1984_2436 150
381 3300048923 Ga0496120_0001940 Ga0496120_0001940_12629_13081 150
382 3300048923 Ga0496120_0004936 Ga0496120_0004936_4954_5406 150
383 3300048924 Ga0496121_0010022 Ga0496121_0010022_10089_10592 150
384 3300048925 Ga0496122_0000070 Ga0496122_0000070_55778_56230 150
385 3300048926 Ga0496123_0000183 Ga0496123_0000183_112476_112928 150
386 3300048927 Ga0496124_0000169 Ga0496124_0000169_109175_109627 150
387 3300048928 Ga0496125_0000056 Ga0496125_0000056_161152_161604 150
388 3300048929 Ga0496126_0000137 Ga0496126_0000137_152758_153210 150
389 3300048929 Ga0496126_0003502 Ga0496126_0003502_11014_11517 150
390 3300049778 Ga0501282_001933 Ga0501282_001933_1296_1814 150
391 iso_pu_bacteria 2888373701 2888376223 150

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01220

DHquinase_II

Dehydroquinase class II

24

162

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1uqr-assembly1.cif.gz_I type ii 3-dehydroquinate dehydratase (dhqase) from actinobacillus pleuropneumoniae 0.986 5 148
1uqr-assembly1.cif.gz_E type ii 3-dehydroquinate dehydratase (dhqase) from actinobacillus pleuropneumoniae 0.984 5 148
1uqr-assembly1.cif.gz_F type ii 3-dehydroquinate dehydratase (dhqase) from actinobacillus pleuropneumoniae 0.982 6 149
1uqr-assembly1.cif.gz_J type ii 3-dehydroquinate dehydratase (dhqase) from actinobacillus pleuropneumoniae 0.9801 5 148
4l8l-assembly1.cif.gz_A crystal structure of the type ii dehydroquinase from pseudomonas aeruginosa 0.9781 4 146
ID Description Score Start End Superfamily
4kiuM00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9592 6 144 3.40.50.9100
1d0iH00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9442 3 144 3.40.50.9100
1gqoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9417 6 144 3.40.50.9100
4kiuM00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9386 6 144 3.40.50.9100
2c57B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9359 6 149 3.40.50.9100
ID Description Score Start End GO Terms
AF-A0A377VAH4-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9978 29 150 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-A0A0G4KFJ6-F1-model_v4 3-dehydroquinate dehydratase (EC 4.2.1.10) 0.9975 6 143 GO:0003855
GO:0016020
GO:0019631
AF-A0A420E7N8-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9964 5 147 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-A0A424N0E8-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9959 5 145 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-C6DIK5-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9949 1 150 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631

Feature Viewer

pLDDT pTM Quality
94.11 0.9 High
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Predicted Structure (AlphaFold2)

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