F433671

General Info

Members Datasets Scaffolds Average Seq Length
397 216 794 275

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10024829|rootH1_1002482926
Length 309
Sequence MTVNRLNPKLQVKITLFIGGNPVEFNGKKIKMNYYELFFTTITTEDYQQDLLINALGEIGFDTFEELELGFKAYIPEDVFDQQALDEQLLPYKDLFTFSYEVNLIPQKNWNEVWESNFEPIEIGDKIYVRATFHEPKPEFDYEIVIDPKMAFGTGHHQTTAMMLALMLENEFAGKKVLDMGCGTGILAIMAAKLGAGDITAIDYDQVCYESTIENSALNNVGNIKPLCGSKEVIPDEQYDIILANINRNILLDQMQRYAEVLKTDGEIYFSGFYESPDLDIITDEARKYGLKYITHKKDKEWVAAKFIK

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
9 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
10 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
11 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
12 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
13 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
14 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
27 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
68 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
69 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
72 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
74 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
75 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
76 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
77 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
78 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
82 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
110 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
111 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
112 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
113 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
122 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
123 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
130 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
131 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
132 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
133 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
134 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
137 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
141 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
142 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
143 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
144 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
145 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
146 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
147 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
148 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
149 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
150 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
151 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
152 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
153 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
154 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
155 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
156 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
157 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
158 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
159 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
163 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
164 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
167 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
168 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
169 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
170 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
171 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
172 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
175 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
176 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
177 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
178 2738541283 Pedobacter sp. OK701 Isolate Unclassified
179 2738541284 Pedobacter sp. YR016 Isolate Unclassified
180 2738541302 Pedobacter sp. CF074 Isolate Unclassified
181 2738543023 Pedobacter sp. OK628 Isolate Unclassified
182 2739367651 Pedobacter sp. OK291 Isolate Unclassified
183 2739367656 Pedobacter sp. CF523 Isolate Unclassified
184 2739367663 Pedobacter sp. YR510 Isolate Unclassified
185 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
186 2818991437 Pedobacter terrae 518 Isolate Unclassified
187 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
188 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
189 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
190 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
191 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
192 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
193 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
194 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
195 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
196 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
197 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
198 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
199 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
200 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
201 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
202 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
203 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
204 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
205 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
206 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
207 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
208 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
209 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
210 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
211 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
212 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
213 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
214 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
215 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
216 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.42
Metatranscriptomes 0
Isolates 10.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.32
Nodule 0
Rhizoplane 0.5
Rhizosphere 79.35
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10024829 3300003316 Bacteria 25564
2 SwRhRL2b_contig_1587187 2162886007 Bacteria 9294
3 SwRhRL2b_contig_2669455 2162886007 Bacteria 1854
4 JGI24736J21556_1016942 3300001904 Bacteria 1157
5 JGI24740J21852_10011425 3300001979 Bacteria 3382
6 JGI24739J22299_10009508 3300001989 Bacteria 3622
7 JGI24737J22298_10000823 3300001990 Bacteria 11028
8 JGI24737J22298_10029473 3300001990 Bacteria 1721
9 JGI24735J21928_10000001 3300002067 Bacteria 650042
10 JGI24744J21845_10005615 3300002077 Bacteria 2598
11 JGI25162J39368_1000011 3300002737 Bacteria 379156
12 JGI25162J39368_1000733 3300002737 Bacteria 22513
13 JGI25157J39369_1009348 3300002741 Bacteria 1323
14 JGI25152J39213_1001701 3300002773 Bacteria 9036
15 JGI25150J39212_1000030 3300002774 Bacteria 101822
16 JGI25151J46595_10000129 3300003187 Bacteria 101822
17 JGI25165J46597_1001509 3300003214 Bacteria 11814
18 JGI25153J46596_10000096 3300003215 Bacteria 101822
19 rootH1_10034112 3300003316 Bacteria 3455
20 rootH2_10006566 3300003320 Bacteria 99379
21 rootH2_10173610 3300003320 Bacteria 3293
22 rootL2_10076109 3300003322 Bacteria 2618
23 rootH1_10031035 3300003323 Bacteria 9255
24 rootH1_10096670 3300003323 Bacteria 4894
25 rootH1_10100595 3300003323 Bacteria 1570
26 rootH1_10192830 3300003323 Bacteria 5284
27 rootH1_10208522 3300003323 Bacteria 2084
28 Ga0055536_1000086 3300003781 Bacteria 80100
29 Ga0055530_10001976 3300003791 Bacteria 13939
30 Ga0065714_10004765 3300005288 Bacteria 7547
31 Ga0065714_10012757 3300005288 Bacteria 2553
32 Ga0065714_10065719 3300005288 Bacteria 8736
33 Ga0065714_10066179 3300005288 Bacteria 7422
34 Ga0065714_10074284 3300005288 Bacteria 3058
35 Ga0065714_10114724 3300005288 Bacteria 1425
36 Ga0065714_10161560 3300005288 Bacteria 1049
37 Ga0065704_10077783 3300005289 Bacteria 4622
38 Ga0065704_10105124 3300005289 Bacteria 2052
39 Ga0070683_100093299 3300005329 Bacteria 2828
40 Ga0068868_100172551 3300005338 Bacteria 1791
41 Ga0068868_100226997 3300005338 Bacteria 1565
42 Ga0070660_100017781 3300005339 Bacteria 5185
43 Ga0070660_100219410 3300005339 Bacteria 1545
44 Ga0070671_100051095 3300005355 Bacteria 3438
45 Ga0070673_100012973 3300005364 Bacteria 5745
46 Ga0070659_100000154 3300005366 Bacteria 52564
47 Ga0070659_100033537 3300005366 Bacteria 3988
48 Ga0070678_100000507 3300005456 Bacteria 18795
49 Ga0070662_100000103 3300005457 Bacteria 46838
50 Ga0070681_10054331 3300005458 Bacteria 3991
51 Ga0068867_100001225 3300005459 Bacteria 17675
52 Ga0070679_100023401 3300005530 Bacteria 6046
53 Ga0068853_100019944 3300005539 Bacteria 5568
54 Ga0068853_100043073 3300005539 Bacteria 3862
55 Ga0068853_100347647 3300005539 Bacteria 1379
56 Ga0070672_100057221 3300005543 Bacteria 3060
57 Ga0070665_100000083 3300005548 Bacteria 181044
58 Ga0068855_100000227 3300005563 Bacteria 71930
59 Ga0068855_100004780 3300005563 Bacteria 16536
60 Ga0068855_100028994 3300005563 Bacteria 6620
61 Ga0068855_100133069 3300005563 Bacteria 2839
62 Ga0068855_100190352 3300005563 Bacteria 2315
63 Ga0068855_100226479 3300005563 Bacteria 2095
64 Ga0068857_100021138 3300005577 Bacteria 5726
65 Ga0068856_100000015 3300005614 Bacteria 157353
66 Ga0068856_100009813 3300005614 Bacteria 9301
67 Ga0068856_100118699 3300005614 Bacteria 2646
68 Ga0068852_100002453 3300005616 Bacteria 12768
69 Ga0068852_100280216 3300005616 Bacteria 1607
70 Ga0068852_100370367 3300005616 Bacteria 1403
71 Ga0068866_10019315 3300005718 Bacteria 3100
72 Ga0068858_100080704 3300005842 Bacteria 3023
73 Ga0075366_10006856 3300006195 Bacteria 6267
74 Ga0075366_10060040 3300006195 Bacteria 2259
75 Ga0097621_100000041 3300006237 Bacteria 66329
76 Ga0075370_10019216 3300006353 Bacteria 3719
77 Ga0068871_100000719 3300006358 Bacteria 22424
78 Ga0068865_100000886 3300006881 Bacteria 16967
79 Ga0105240_10000010 3300009093 Bacteria 537830
80 Ga0105240_10006933 3300009093 Bacteria 16551
81 Ga0105240_10050600 3300009093 Bacteria 5236
82 Ga0105240_10050856 3300009093 Bacteria 5221
83 Ga0105240_10051628 3300009093 Bacteria 5172
84 Ga0105240_10167314 3300009093 Bacteria 2606
85 Ga0105240_10227652 3300009093 Bacteria 2168
86 Ga0105240_10359937 3300009093 Bacteria 1648
87 Ga0105240_10473432 3300009093 Bacteria 1397
88 Ga0105243_10000109 3300009148 Bacteria 94597
89 Ga0105241_10005060 3300009174 Bacteria 9723
90 Ga0105241_10005271 3300009174 Bacteria 9548
91 Ga0105241_10039709 3300009174 Bacteria 3551
92 Ga0105241_10499396 3300009174 Bacteria 1084
93 Ga0105237_10001190 3300009545 Bacteria 34836
94 Ga0105237_10003268 3300009545 Bacteria 19368
95 Ga0105237_10005875 3300009545 Bacteria 13760
96 Ga0105237_10007003 3300009545 Bacteria 12423
97 Ga0105237_10007552 3300009545 Bacteria 11881
98 Ga0105237_10192546 3300009545 Bacteria 2039
99 Ga0105237_10380589 3300009545 Bacteria 1416
100 Ga0105238_10033269 3300009551 Bacteria 5247
101 Ga0105239_10000002 3300010375 Bacteria 610298
102 Ga0105239_10000006 3300010375 Bacteria 442319
103 Ga0105239_10002369 3300010375 Bacteria 24039
104 Ga0105239_10003056 3300010375 Bacteria 20800
105 Ga0105239_10020541 3300010375 Bacteria 7285
106 Ga0105239_10035026 3300010375 Bacteria 5513
107 Ga0105239_10063175 3300010375 Bacteria 4065
108 Ga0105239_11085421 3300010375 Bacteria 921
109 Ga0105246_10085688 3300011119 Bacteria 2257
110 Ga0105246_10139006 3300011119 Bacteria 1824
111 Ga0105246_10292277 3300011119 Bacteria 1312
112 Ga0157373_10000181 3300013100 Bacteria 51804
113 Ga0157373_10000496 3300013100 Bacteria 31139
114 Ga0157373_10002319 3300013100 Bacteria 14426
115 Ga0157373_10009423 3300013100 Bacteria 7211
116 Ga0157373_10025813 3300013100 Bacteria 4247
117 Ga0157373_10060299 3300013100 Bacteria 2688
118 Ga0157373_10063345 3300013100 Bacteria 2618
119 Ga0157371_10000141 3300013102 Bacteria 104396
120 Ga0157371_10000348 3300013102 Bacteria 59339
121 Ga0157371_10000869 3300013102 Bacteria 34259
122 Ga0157371_10001213 3300013102 Bacteria 27466
123 Ga0157371_10017779 3300013102 Bacteria 5274
124 Ga0157371_10025503 3300013102 Bacteria 4307
125 Ga0157371_10054989 3300013102 Bacteria 2825
126 Ga0157370_10016882 3300013104 Bacteria 7379
127 Ga0157370_10028975 3300013104 Bacteria 5440
128 Ga0157370_10028982 3300013104 Bacteria 5439
129 Ga0157370_10034905 3300013104 Bacteria 4893
130 Ga0157370_10055630 3300013104 Bacteria 3768
131 Ga0157370_10070466 3300013104 Bacteria 3300
132 Ga0157370_10080370 3300013104 Bacteria 3069
133 Ga0157370_10118478 3300013104 Bacteria 2473
134 Ga0157370_10211262 3300013104 Bacteria 1798
135 Ga0157370_10734877 3300013104 Bacteria 900
136 Ga0157369_10000005 3300013105 Bacteria 470816
137 Ga0157369_10334547 3300013105 Bacteria 1573
138 Ga0157369_10344326 3300013105 Bacteria 1548
139 Ga0157374_10000129 3300013296 Bacteria 69468
140 Ga0157374_10009486 3300013296 Bacteria 8358
141 Ga0157378_10005178 3300013297 Bacteria 11451
142 Ga0157378_10533424 3300013297 Bacteria 1177
143 Ga0157378_10701871 3300013297 Bacteria 1031
144 Ga0163162_10000068 3300013306 Bacteria 97068
145 Ga0163162_10000205 3300013306 Bacteria 54827
146 Ga0163162_10023053 3300013306 Bacteria 6140
147 Ga0163162_10051854 3300013306 Bacteria 4118
148 Ga0163162_10523559 3300013306 Bacteria 1315
149 Ga0157372_10000016 3300013307 Bacteria 220177
150 Ga0157372_10000418 3300013307 Bacteria 46635
151 Ga0157372_10001333 3300013307 Bacteria 26670
152 Ga0157372_10026851 3300013307 Bacteria 6268
153 Ga0157372_10137828 3300013307 Bacteria 2811
154 Ga0157372_10159458 3300013307 Bacteria 2606
155 Ga0157372_10205212 3300013307 Bacteria 2284
156 Ga0157375_10012166 3300013308 Bacteria 7627
157 Ga0157375_10026133 3300013308 Bacteria 5437
158 Ga0157375_10062384 3300013308 Bacteria 3704
159 Ga0157375_10070440 3300013308 Bacteria 3507
160 Ga0182008_10000009 3300014497 Bacteria 331416
161 Ga0182008_10000128 3300014497 Bacteria 57510
162 Ga0182008_10000159 3300014497 Bacteria 53199
163 Ga0182008_10027796 3300014497 Bacteria 2862
164 Ga0182008_10054294 3300014497 Bacteria 1982
165 Ga0182008_10121688 3300014497 Bacteria 1297
166 Ga0157377_10002017 3300014745 Bacteria 8897
167 Ga0157376_10019140 3300014969 Bacteria 5268
168 Ga0182006_1000743 3300015261 Bacteria 22312
169 Ga0182006_1003034 3300015261 Bacteria 8828
170 Ga0182006_1006938 3300015261 Bacteria 5213
171 Ga0182007_10000080 3300015262 Bacteria 73401
172 Ga0182007_10006303 3300015262 Bacteria 5102
173 Ga0182007_10022277 3300015262 Bacteria 2239
174 Ga0182007_10036588 3300015262 Bacteria 1651
175 Ga0183373_1003 3300015682 Bacteria 558813
176 Ga0163161_10006049 3300017792 Bacteria 8389
177 Ga0163161_10007755 3300017792 Bacteria 7426
178 Ga0163161_10007957 3300017792 Bacteria 7335
179 Ga0163161_10016132 3300017792 Bacteria 5214
180 Ga0163161_10016886 3300017792 Bacteria 5102
181 Ga0163161_10039893 3300017792 Bacteria 3372
182 Ga0213872_10027569 3300021361 Bacteria 2607
183 Ga0207427_100090 3300025231 Bacteria 133759
184 Ga0209437_100017 3300025233 Bacteria 694471
185 Ga0209437_100034 3300025233 Bacteria 494007
186 Ga0207425_1000004 3300025245 Bacteria 1092421
187 Ga0209026_1002280 3300025250 Bacteria 7334
188 Ga0209129_1000005 3300025258 Bacteria 777812
189 Ga0209233_1000038 3300025261 Bacteria 548972
190 Ga0209233_1004117 3300025261 Bacteria 5010
191 Ga0209455_1008250 3300025272 Bacteria 2849
192 Ga0209676_1000001 3300025292 Bacteria 1852142
193 Ga0209025_1000009 3300025294 Bacteria 1092561
194 Ga0209758_1000010 3300025297 Bacteria 1092782
195 Ga0209050_1000408 3300025298 Bacteria 80140
196 Ga0207647_10000062 3300025904 Bacteria 83809
197 Ga0207647_10000263 3300025904 Bacteria 43120
198 Ga0207705_10000080 3300025909 Bacteria 119562
199 Ga0207654_10037439 3300025911 Bacteria 2716
200 Ga0207695_10000019 3300025913 Bacteria 732137
201 Ga0207695_10005987 3300025913 Bacteria 15904
202 Ga0207695_10028435 3300025913 Bacteria 6199
203 Ga0207695_10136865 3300025913 Bacteria 2402
204 Ga0207695_10357498 3300025913 Bacteria 1347
205 Ga0207671_10000667 3300025914 Bacteria 44873
206 Ga0207671_10011704 3300025914 Bacteria 7111
207 Ga0207671_10013713 3300025914 Bacteria 6436
208 Ga0207671_10038242 3300025914 Bacteria 3556
209 Ga0207671_10126988 3300025914 Bacteria 1954
210 Ga0207657_10135076 3300025919 Bacteria 2019
211 Ga0207652_10015415 3300025921 Bacteria 6209
212 Ga0207694_10017459 3300025924 Bacteria 5424
213 Ga0207694_10175215 3300025924 Bacteria 1738
214 Ga0207700_10683410 3300025928 Bacteria 916
215 Ga0207644_10004371 3300025931 Bacteria 9169
216 Ga0207690_10000518 3300025932 Bacteria 25073
217 Ga0207690_10098975 3300025932 Bacteria 2078
218 Ga0207706_10004297 3300025933 Bacteria 13389
219 Ga0207709_10000072 3300025935 Bacteria 178084
220 Ga0207704_10000037 3300025938 Bacteria 93990
221 Ga0207661_10071519 3300025944 Bacteria 2835
222 Ga0207667_10000217 3300025949 Bacteria 80489
223 Ga0207667_10004777 3300025949 Bacteria 16568
224 Ga0207667_10010632 3300025949 Bacteria 10742
225 Ga0207667_10016394 3300025949 Bacteria 8375
226 Ga0207667_10070791 3300025949 Bacteria 3629
227 Ga0207667_10196421 3300025949 Bacteria 2070
228 Ga0207667_10324607 3300025949 Bacteria 1572
229 Ga0207677_10101093 3300026023 Bacteria 2122
230 Ga0207639_10022388 3300026041 Bacteria 4552
231 Ga0207702_10000883 3300026078 Bacteria 31196
232 Ga0207702_10043049 3300026078 Bacteria 3789
233 Ga0207648_10006640 3300026089 Bacteria 11486
234 Ga0207683_10002162 3300026121 Bacteria 17271
235 Ga0207698_10273665 3300026142 Bacteria 1558
236 Ga0268266_10000095 3300028379 Bacteria 186169
237 Ga0307517_10005537 3300028786 Bacteria 18980
238 Ga0307515_10001752 3300028794 Bacteria 48338
239 Ga0307515_10003953 3300028794 Bacteria 30928
240 Ga0307515_10050824 3300028794 Bacteria 6198
241 Ga0265338_10014893 3300028800 Bacteria 8601
242 Ga0316177_1115437 3300030731 Bacteria 2725
243 Ga0316176_1034171 3300030732 Bacteria 18263
244 Ga0316183_1083168 3300030742 Bacteria 31711
245 Ga0316181_1043546 3300030744 Bacteria 1218
246 Ga0265330_10001163 3300031235 Bacteria 15675
247 Ga0307509_10043540 3300031507 Bacteria 4858
248 Ga0307408_100001197 3300031548 Bacteria 19594
249 Ga0307408_100002023 3300031548 Bacteria 14625
250 Ga0307405_10000030 3300031731 Bacteria 99574
251 Ga0307405_10055188 3300031731 Bacteria 2485
252 Ga0307407_10000023 3300031903 Bacteria 118352
253 Ga0307412_10000084 3300031911 Bacteria 90908
254 Ga0307412_10087903 3300031911 Bacteria 2166
255 Ga0307412_10105615 3300031911 Bacteria 2001
256 Ga0307412_10370943 3300031911 Bacteria 1156
257 Ga0307416_100000049 3300032002 Bacteria 118358
258 Ga0307416_100177238 3300032002 Bacteria 1993
259 Ga0307414_10000056 3300032004 Bacteria 113603
260 Ga0307414_10000555 3300032004 Bacteria 19494
261 Ga0307414_10002575 3300032004 Bacteria 9540
262 Ga0307414_10007494 3300032004 Bacteria 6132
263 Ga0307414_10016670 3300032004 Bacteria 4474
264 Ga0307414_10052597 3300032004 Bacteria 2835
265 Ga0307414_10070712 3300032004 Bacteria 2514
266 Ga0307507_10005801 3300033179 Bacteria 19805
267 Ga0307510_10003047 3300033180 Bacteria 19348
268 Ga0373941_0109017 3300035115 Bacteria 973
269 Ga0395899_0000002 3300037312 Bacteria 1324310
270 Ga0395899_0000283 3300037312 Bacteria 65893
271 Ga0395899_0013561 3300037312 Bacteria 6230
272 Ga0395900_0000095 3300037418 Bacteria 164383
273 Ga0395900_0000694 3300037418 Bacteria 44919
274 Ga0395900_0007931 3300037418 Bacteria 10931
275 Ga0395900_0332515 3300037418 Bacteria 1497
276 Ga0395898_0015496 3300037466 Bacteria 7818
277 Ga0395898_0306045 3300037466 Bacteria 1516
278 Ga0395905_0000686 3300037471 Bacteria 44822
279 Ga0395905_0002844 3300037471 Bacteria 18950
280 Ga0395905_0077673 3300037471 Bacteria 3111
281 Ga0395901_0000890 3300038443 Bacteria 32857
282 Ga0395901_0006685 3300038443 Bacteria 11656
283 Ga0400483_151799 3300039062 Bacteria 2706
284 Ga0436361_0088997 3300039447 Bacteria 5506
285 Ga0451787_240679 3300041441 Bacteria 1359
286 Ga0439448_0031970 3300042005 Bacteria 1673
287 Ga0439455_0063217 3300042012 Bacteria 985
288 Ga0439457_005091 3300042014 Bacteria 3347
289 Ga0451577_0000010 3300042876 Bacteria 616686
290 Ga0451577_0083282 3300042876 Unclassified 2853
291 Ga0453683_0000111 3300044673 Bacteria 122663
292 Ga0453683_0006778 3300044673 Bacteria 7825
293 Ga0453683_0199574 3300044673 Bacteria 1270
294 Ga0466966_0118556 3300044684 Bacteria 1627
295 Ga0453684_0000130 3300044712 Bacteria 331761
296 Ga0453684_0269559 3300044712 Bacteria 1946
297 Ga0453684_0646178 3300044712 Bacteria 1155
298 Ga0451576_0000670 3300045051 Bacteria 70399
299 Ga0451576_0123353 3300045051 Bacteria 2698
300 Ga0451576_0165377 3300045051 Unclassified 2308
301 Ga0451576_0520747 3300045051 Bacteria 1249
302 Ga0466958_0069529 3300045836 Bacteria 2153
303 Ga0495650_0000014 3300046471 Bacteria 581606
304 Ga0495585_0001438 3300046492 Bacteria 18677
305 Ga0495585_0002656 3300046492 Bacteria 12556
306 Ga0495583_0046887 3300046506 Bacteria 1991
307 Ga0495606_0000241 3300046507 Bacteria 96663
308 Ga0495606_0019665 3300046507 Bacteria 5012
309 Ga0495606_0204474 3300046507 Bacteria 1123
310 Ga0495610_0000565 3300046512 Bacteria 37056
311 Ga0495610_0004805 3300046512 Bacteria 9859
312 Ga0495610_0005548 3300046512 Bacteria 8931
313 Ga0495616_0005420 3300046513 Bacteria 7861
314 Ga0495616_0018379 3300046513 Bacteria 3838
315 Ga0495631_0008204 3300046518 Bacteria 5268
316 Ga0495648_0001856 3300046524 Bacteria 20231
317 Ga0495648_0036840 3300046524 Bacteria 3149
318 Ga0495642_0130802 3300046528 Unclassified 1080
319 Ga0495652_0120907 3300046529 Bacteria 2089
320 Ga0495609_0007672 3300046538 Bacteria 5361
321 Ga0495633_0000069 3300046558 Bacteria 135128
322 Ga0495633_0002743 3300046558 Bacteria 12174
323 Ga0495668_0000494 3300046616 Bacteria 49401
324 Ga0495668_0048289 3300046616 Bacteria 2362
325 Ga0495625_0000003 3300046660 Bacteria 686847
326 Ga0495625_0020998 3300046660 Bacteria 5034
327 Ga0495625_0025434 3300046660 Bacteria 4491
328 Ga0495625_0063732 3300046660 Bacteria 2602
329 Ga0495661_0002857 3300046665 Bacteria 13074
330 Ga0495661_0035590 3300046665 Bacteria 3122
331 Ga0495658_0010036 3300046683 Bacteria 4728
332 Ga0495649_0000002 3300046694 Bacteria 1093458
333 Ga0495687_000785 3300047443 Bacteria 34129
334 Ga0495687_001629 3300047443 Bacteria 20224
335 Ga0495686_0000582 3300047472 Bacteria 51799
336 Ga0495686_0001784 3300047472 Bacteria 21898
337 Ga0496116_0001232 3300048919 Bacteria 29803
338 Ga0496117_0005680 3300048920 Bacteria 13001
339 Ga0496122_0001073 3300048925 Bacteria 47498
340 Ga0496122_0004988 3300048925 Bacteria 16061
341 Ga0501223_000832 3300049663 Bacteria 7325
342 Ga0501241_011223 3300049758 Bacteria 1627
343 nmdc:mga0k408_1769_c1 3300050493 Bacteria 11585
344 nmdc:mga0k408_847_c1 3300050493 Bacteria 16835
345 nmdc:mga07m45_19897_c1 3300050496 Bacteria 3641
346 Ga0500635_0000725 3300053080 Bacteria 8283
347 Ga0500651_0001952 3300053093 Bacteria 10673
348 Ga0500608_000867 3300053122 Bacteria 10918
349 Ga0500608_001234 3300053122 Bacteria 9125
350 Ga0500618_000002 3300053125 Bacteria 370822
351 Ga0500618_016674 3300053125 Bacteria 1835
352 Ga0500568_0020262 3300053139 Bacteria 2880
353 Ga0500579_141190 3300053143 Bacteria 1087
354 Ga0500616_0121493 3300053153 Bacteria 1247
355 Ga0500624_000602 3300053157 Bacteria 9830
356 2586208040 2585427687 Bacteria 5544917
357 2599477259 2599185184 Bacteria 6430550
358 2722730284 2721755487 Bacteria 6357185
359 2738753949 2738541283 Bacteria 7222293
360 2738762833 2738541284 Bacteria 5199923
361 2738853412 2738541302 Bacteria 5944758
362 2739304718 2738543023 Bacteria 6767879
363 2739591123 2739367651 Bacteria 6359826
364 2739615516 2739367656 Bacteria 5152243
365 2739644742 2739367663 Bacteria 5040914
366 2776614395 2775506987 Bacteria 5373360
367 2819548905 2818991437 Bacteria 5805520
368 2839992826 2839989709 Bacteria 3773432
369 2842723370 2842722452 Bacteria 6263924
370 2842906862 2842903701 Bacteria 6986368
371 2842909863 2842909656 Bacteria 6185908
372 2849287045 2849281842 Bacteria 6065644
373 2852624120 2852623160 Bacteria 4376875
374 2852627572 2852627209 Bacteria 5896285
375 2857628743 2857627736 Bacteria 5625397
376 2884635868 2884634485 Bacteria 3928637
377 2884936960 2884933994 Bacteria 4535041
378 2890739777 2890737413 Bacteria 4269751
379 2896318361 2896317667 Bacteria 4606601
380 2896345971 2896344016 Bacteria 3811746
381 2898715012 2898713307 Bacteria 4110805
382 2902051267 2902048731 Bacteria 4976191
383 2904446074 2904445276 Bacteria 5310396
384 2904783916 2904780799 Bacteria 5840761
385 2919181854 2919177583 Bacteria 5641607
386 2919187741 2919186247 Bacteria 6244071
387 2919440760 2919437846 Bacteria 6199444
388 2919694972 2919692658 Bacteria 5943958
389 2928079175 2928078545 Bacteria 6534839
390 2928148454 2928147474 Bacteria 6512076
391 2932085751 2932082852 Bacteria 6563563
392 2939664992 2939664404 Bacteria 6364494
393 2946000176 2945997725 Bacteria 6404843
394 2954017092 2954016120 Bacteria 6446024
395 2977232984 2977232053 Bacteria 5485925
396 3003236023 3003233435 Bacteria 4458031
397 8055589188 8055588893 Bacteria 3619545
398 rootH1_10024829
399 SwRhRL2b_contig_1587187
400 SwRhRL2b_contig_2669455
401 JGI24736J21556_1016942
402 JGI24740J21852_10011425
403 JGI24739J22299_10009508
404 JGI24737J22298_10000823
405 JGI24737J22298_10029473
406 JGI24735J21928_10000001
407 JGI24744J21845_10005615
408 JGI25162J39368_1000011
409 JGI25162J39368_1000733
410 JGI25157J39369_1009348
411 JGI25152J39213_1001701
412 JGI25150J39212_1000030
413 JGI25151J46595_10000129
414 JGI25165J46597_1001509
415 JGI25153J46596_10000096
416 rootH1_10034112
417 rootH2_10006566
418 rootH2_10173610
419 rootL2_10076109
420 rootH1_10031035
421 rootH1_10096670
422 rootH1_10100595
423 rootH1_10192830
424 rootH1_10208522
425 Ga0055536_1000086
426 Ga0055530_10001976
427 Ga0065714_10004765
428 Ga0065714_10012757
429 Ga0065714_10065719
430 Ga0065714_10066179
431 Ga0065714_10074284
432 Ga0065714_10114724
433 Ga0065714_10161560
434 Ga0065704_10077783
435 Ga0065704_10105124
436 Ga0070683_100093299
437 Ga0068868_100172551
438 Ga0068868_100226997
439 Ga0070660_100017781
440 Ga0070660_100219410
441 Ga0070671_100051095
442 Ga0070673_100012973
443 Ga0070659_100000154
444 Ga0070659_100033537
445 Ga0070678_100000507
446 Ga0070662_100000103
447 Ga0070681_10054331
448 Ga0068867_100001225
449 Ga0070679_100023401
450 Ga0068853_100019944
451 Ga0068853_100043073
452 Ga0068853_100347647
453 Ga0070672_100057221
454 Ga0070665_100000083
455 Ga0068855_100000227
456 Ga0068855_100004780
457 Ga0068855_100028994
458 Ga0068855_100133069
459 Ga0068855_100190352
460 Ga0068855_100226479
461 Ga0068857_100021138
462 Ga0068856_100000015
463 Ga0068856_100009813
464 Ga0068856_100118699
465 Ga0068852_100002453
466 Ga0068852_100280216
467 Ga0068852_100370367
468 Ga0068866_10019315
469 Ga0068858_100080704
470 Ga0075366_10006856
471 Ga0075366_10060040
472 Ga0097621_100000041
473 Ga0075370_10019216
474 Ga0068871_100000719
475 Ga0068865_100000886
476 Ga0105240_10000010
477 Ga0105240_10006933
478 Ga0105240_10050600
479 Ga0105240_10050856
480 Ga0105240_10051628
481 Ga0105240_10167314
482 Ga0105240_10227652
483 Ga0105240_10359937
484 Ga0105240_10473432
485 Ga0105243_10000109
486 Ga0105241_10005060
487 Ga0105241_10005271
488 Ga0105241_10039709
489 Ga0105241_10499396
490 Ga0105237_10001190
491 Ga0105237_10003268
492 Ga0105237_10005875
493 Ga0105237_10007003
494 Ga0105237_10007552
495 Ga0105237_10192546
496 Ga0105237_10380589
497 Ga0105238_10033269
498 Ga0105239_10000002
499 Ga0105239_10000006
500 Ga0105239_10002369
501 Ga0105239_10003056
502 Ga0105239_10020541
503 Ga0105239_10035026
504 Ga0105239_10063175
505 Ga0105239_11085421
506 Ga0105246_10085688
507 Ga0105246_10139006
508 Ga0105246_10292277
509 Ga0157373_10000181
510 Ga0157373_10000496
511 Ga0157373_10002319
512 Ga0157373_10009423
513 Ga0157373_10025813
514 Ga0157373_10060299
515 Ga0157373_10063345
516 Ga0157371_10000141
517 Ga0157371_10000348
518 Ga0157371_10000869
519 Ga0157371_10001213
520 Ga0157371_10017779
521 Ga0157371_10025503
522 Ga0157371_10054989
523 Ga0157370_10016882
524 Ga0157370_10028975
525 Ga0157370_10028982
526 Ga0157370_10034905
527 Ga0157370_10055630
528 Ga0157370_10070466
529 Ga0157370_10080370
530 Ga0157370_10118478
531 Ga0157370_10211262
532 Ga0157370_10734877
533 Ga0157369_10000005
534 Ga0157369_10334547
535 Ga0157369_10344326
536 Ga0157374_10000129
537 Ga0157374_10009486
538 Ga0157378_10005178
539 Ga0157378_10533424
540 Ga0157378_10701871
541 Ga0163162_10000068
542 Ga0163162_10000205
543 Ga0163162_10023053
544 Ga0163162_10051854
545 Ga0163162_10523559
546 Ga0157372_10000016
547 Ga0157372_10000418
548 Ga0157372_10001333
549 Ga0157372_10026851
550 Ga0157372_10137828
551 Ga0157372_10159458
552 Ga0157372_10205212
553 Ga0157375_10012166
554 Ga0157375_10026133
555 Ga0157375_10062384
556 Ga0157375_10070440
557 Ga0182008_10000009
558 Ga0182008_10000128
559 Ga0182008_10000159
560 Ga0182008_10027796
561 Ga0182008_10054294
562 Ga0182008_10121688
563 Ga0157377_10002017
564 Ga0157376_10019140
565 Ga0182006_1000743
566 Ga0182006_1003034
567 Ga0182006_1006938
568 Ga0182007_10000080
569 Ga0182007_10006303
570 Ga0182007_10022277
571 Ga0182007_10036588
572 Ga0183373_1003
573 Ga0163161_10006049
574 Ga0163161_10007755
575 Ga0163161_10007957
576 Ga0163161_10016132
577 Ga0163161_10016886
578 Ga0163161_10039893
579 Ga0213872_10027569
580 Ga0207427_100090
581 Ga0209437_100017
582 Ga0209437_100034
583 Ga0207425_1000004
584 Ga0209026_1002280
585 Ga0209129_1000005
586 Ga0209233_1000038
587 Ga0209233_1004117
588 Ga0209455_1008250
589 Ga0209676_1000001
590 Ga0209025_1000009
591 Ga0209758_1000010
592 Ga0209050_1000408
593 Ga0207647_10000062
594 Ga0207647_10000263
595 Ga0207705_10000080
596 Ga0207654_10037439
597 Ga0207695_10000019
598 Ga0207695_10005987
599 Ga0207695_10028435
600 Ga0207695_10136865
601 Ga0207695_10357498
602 Ga0207671_10000667
603 Ga0207671_10011704
604 Ga0207671_10013713
605 Ga0207671_10038242
606 Ga0207671_10126988
607 Ga0207657_10135076
608 Ga0207652_10015415
609 Ga0207694_10017459
610 Ga0207694_10175215
611 Ga0207700_10683410
612 Ga0207644_10004371
613 Ga0207690_10000518
614 Ga0207690_10098975
615 Ga0207706_10004297
616 Ga0207709_10000072
617 Ga0207704_10000037
618 Ga0207661_10071519
619 Ga0207667_10000217
620 Ga0207667_10004777
621 Ga0207667_10010632
622 Ga0207667_10016394
623 Ga0207667_10070791
624 Ga0207667_10196421
625 Ga0207667_10324607
626 Ga0207677_10101093
627 Ga0207639_10022388
628 Ga0207702_10000883
629 Ga0207702_10043049
630 Ga0207648_10006640
631 Ga0207683_10002162
632 Ga0207698_10273665
633 Ga0268266_10000095
634 Ga0307517_10005537
635 Ga0307515_10001752
636 Ga0307515_10003953
637 Ga0307515_10050824
638 Ga0265338_10014893
639 Ga0316177_1115437
640 Ga0316176_1034171
641 Ga0316183_1083168
642 Ga0316181_1043546
643 Ga0265330_10001163
644 Ga0307509_10043540
645 Ga0307408_100001197
646 Ga0307408_100002023
647 Ga0307405_10000030
648 Ga0307405_10055188
649 Ga0307407_10000023
650 Ga0307412_10000084
651 Ga0307412_10087903
652 Ga0307412_10105615
653 Ga0307412_10370943
654 Ga0307416_100000049
655 Ga0307416_100177238
656 Ga0307414_10000056
657 Ga0307414_10000555
658 Ga0307414_10002575
659 Ga0307414_10007494
660 Ga0307414_10016670
661 Ga0307414_10052597
662 Ga0307414_10070712
663 Ga0307507_10005801
664 Ga0307510_10003047
665 Ga0373941_0109017
666 Ga0395899_0000002
667 Ga0395899_0000283
668 Ga0395899_0013561
669 Ga0395900_0000095
670 Ga0395900_0000694
671 Ga0395900_0007931
672 Ga0395900_0332515
673 Ga0395898_0015496
674 Ga0395898_0306045
675 Ga0395905_0000686
676 Ga0395905_0002844
677 Ga0395905_0077673
678 Ga0395901_0000890
679 Ga0395901_0006685
680 Ga0400483_151799
681 Ga0436361_0088997
682 Ga0451787_240679
683 Ga0439448_0031970
684 Ga0439455_0063217
685 Ga0439457_005091
686 Ga0451577_0000010
687 Ga0451577_0083282
688 Ga0453683_0000111
689 Ga0453683_0006778
690 Ga0453683_0199574
691 Ga0466966_0118556
692 Ga0453684_0000130
693 Ga0453684_0269559
694 Ga0453684_0646178
695 Ga0451576_0000670
696 Ga0451576_0123353
697 Ga0451576_0165377
698 Ga0451576_0520747
699 Ga0466958_0069529
700 Ga0495650_0000014
701 Ga0495585_0001438
702 Ga0495585_0002656
703 Ga0495583_0046887
704 Ga0495606_0000241
705 Ga0495606_0019665
706 Ga0495606_0204474
707 Ga0495610_0000565
708 Ga0495610_0004805
709 Ga0495610_0005548
710 Ga0495616_0005420
711 Ga0495616_0018379
712 Ga0495631_0008204
713 Ga0495648_0001856
714 Ga0495648_0036840
715 Ga0495642_0130802
716 Ga0495652_0120907
717 Ga0495609_0007672
718 Ga0495633_0000069
719 Ga0495633_0002743
720 Ga0495668_0000494
721 Ga0495668_0048289
722 Ga0495625_0000003
723 Ga0495625_0020998
724 Ga0495625_0025434
725 Ga0495625_0063732
726 Ga0495661_0002857
727 Ga0495661_0035590
728 Ga0495658_0010036
729 Ga0495649_0000002
730 Ga0495687_000785
731 Ga0495687_001629
732 Ga0495686_0000582
733 Ga0495686_0001784
734 Ga0496116_0001232
735 Ga0496117_0005680
736 Ga0496122_0001073
737 Ga0496122_0004988
738 Ga0501223_000832
739 Ga0501241_011223
740 nmdc:mga0k408_1769_c1
741 nmdc:mga0k408_847_c1
742 nmdc:mga07m45_19897_c1
743 Ga0500635_0000725
744 Ga0500651_0001952
745 Ga0500608_000867
746 Ga0500608_001234
747 Ga0500618_000002
748 Ga0500618_016674
749 Ga0500568_0020262
750 Ga0500579_141190
751 Ga0500616_0121493
752 Ga0500624_000602
753 2586208040
754 2599477259
755 2722730284
756 2738753949
757 2738762833
758 2738853412
759 2739304718
760 2739591123
761 2739615516
762 2739644742
763 2776614395
764 2819548905
765 2839992826
766 2842723370
767 2842906862
768 2842909863
769 2849287045
770 2852624120
771 2852627572
772 2857628743
773 2884635868
774 2884936960
775 2890739777
776 2896318361
777 2896345971
778 2898715012
779 2902051267
780 2904446074
781 2904783916
782 2919181854
783 2919187741
784 2919440760
785 2919694972
786 2928079175
787 2928148454
788 2932085751
789 2939664992
790 2946000176
791 2954017092
792 2977232984
793 3003236023
794 8055589188

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06325

PrmA

Ribosomal protein L11 methyltransferase (PrmA)

32

309

0.89

PF13649

Methyltransf_25

Methyltransferase domain

177

266

0.87

PF13847

Methyltransf_31

Methyltransferase domain

171

306

0.86

PF05175

MTS

Methyltransferase small domain

142

270

0.82

PF08241

Methyltransf_11

Methyltransferase domain

178

270

0.82

PF13489

Methyltransf_23

Methyltransferase domain

156

289

0.77

PF02475

Met_10

Met-10+ like-protein

130

270

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8992 45 228
8g2g-assembly2.cif.gz_B-3 crystal structure of prmt3 with compound yd1113 0.8911 93 189
3r0q-assembly2.cif.gz_G a uniquely open conformation revealed in the crystal structure of arabidopsis thaliana protein arginine methyltransferase 10 0.8897 93 189
1f3l-assembly1.cif.gz_A crystal structure of the conserved core of protein arginine methyltransferase prmt3 0.8896 94 189
8g2g-assembly1.cif.gz_A crystal structure of prmt3 with compound yd1113 0.8876 93 189
ID Description Score Start End Superfamily
3grzA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9347 88 228 3.40.50.150
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9265 91 153 3.40.50.150
2nxjB03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9067 88 230 3.40.50.150
af_O02325_138_271_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9047 86 165 3.40.50.150
af_Q8IEC3_50_217_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9013 92 150 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A519QTR5-F1-model_v4 50S ribosomal protein L11 methyltransferase 1.002 117 230 GO:0005840
GO:0008276
GO:0032259
AF-A0A519QTR5-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9846 117 230 GO:0005840
GO:0008276
GO:0032259
AF-A0A533T6Q1-F1-model_v4 Class I SAM-dependent rRNA methyltransferase 0.9746 93 150 GO:0003723
GO:0005737
GO:0008168
GO:0032259
AF-A0A354M190-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9727 104 230 GO:0005840
GO:0008276
GO:0032259
AF-A0A4S4GBJ9-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9648 86 230 GO:0005840
GO:0008276
GO:0032259

Map