F433828

General Info

Members Datasets Scaffolds Average Seq Length
397 211 794 416

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0077137|Ga0395905_0077137_1012_2430
Length 472
Sequence MRQRFFKMRDARASSPAKTYWDTIINEMTPSNDNRHGAGAEPASLLRYMAKWLLLAGLVGALGGSASAIFLLALDWATASRSALPWLIALLPLAGFAVGWLYLRYGREVEAGNNLLIDEIHDPKKVIPLRMAPLVLGATVVSHLFGASVGREGTAVQMGGALADQLTHAFRLQPHDRRIILMAGISAGFASVFGTPLAGAVFGLEVLAIGRMRYDALFACLAAAIVGDQVCLLWNVHHTHYAIGQVPVPGAWPVLATVIAGAAFGLAGRLFADSTHALGGWLTRRIPYGPLRALLGGIVIAAAVWALGAQRYIGLGIPTIQQAFLQPLAPWDWAGKLVFTVASLGSGFKGGEVTPLFYIGATLGNALAPLLHMPIALLAGVGFVAVFAGAANTPLACTLMAVELFGAEAGVYAAVGCVVSYLFSGHTGIYRSQRIGQGKHGRQGAAPEGMRLGELGTWRRQARERADSAAEK

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
7 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
25 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
26 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
27 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
28 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
32 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
33 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
34 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
35 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
38 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
39 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
40 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
41 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
42 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
43 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
44 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
45 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
65 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
68 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
77 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
78 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
79 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
80 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
81 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
82 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
83 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
91 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
92 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
93 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
98 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
99 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
100 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
101 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
102 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
103 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
109 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
114 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
117 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
120 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
121 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
122 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
123 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
132 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
133 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
134 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
135 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
136 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
137 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
140 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
143 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
146 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
147 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
148 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
149 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
150 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
151 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
152 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
165 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
166 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
168 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
171 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
172 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
173 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
174 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
175 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
176 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
177 2643221596 Acidovorax sp. Root70 Isolate Unclassified
178 2643221638 Duganella sp. Root336D2 Isolate Unclassified
179 2643221645 Massilia sp. Root351 Isolate Unclassified
180 2643221664 Massilia sp. Root418 Isolate Unclassified
181 2738541277 Variovorax sp. GV051 Isolate Unclassified
182 2738541280 Massilia sp. GV090 Isolate Unclassified
183 2738541297 Duganella sp. GV083 Isolate Unclassified
184 2738541300 Massilia sp. GV016 Isolate Unclassified
185 2738541357 Duganella sp. GV053 Isolate Unclassified
186 2738543003 Duganella sp. GV066 Isolate Unclassified
187 2738543018 Massilia sp. GV045 Isolate Unclassified
188 2738543019 Variovorax sp. GV040 Isolate Unclassified
189 2738543026 Duganella sp. GV089 Isolate Unclassified
190 2738543029 Duganella sp. GV039 Isolate Unclassified
191 2738543030 Massilia sp. GV097 Isolate Unclassified
192 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
193 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
194 2821131069 Duganella sp. 1224 Isolate Unclassified
195 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
196 2842711865 Duganella sp. R-73148 Isolate Unclassified
197 2855730933 Achromobacter sp. HZ28 Isolate Nodule
198 2855767633 Achromobacter sp. HZ34 Isolate Nodule
199 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
200 2857558681 Duganella sp. R-74565 Isolate Unclassified
201 2857564685 Duganella sp. R-74599 Isolate Unclassified
202 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
203 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
204 2904424332 Duganella sp. 1411 Isolate Rhizosphere
205 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
206 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
207 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
208 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
209 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
210 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
211 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.43
Metatranscriptomes 0
Isolates 9.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.38
Nodule 1.76
Rhizoplane 1.76
Rhizosphere 64.48
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0077137 3300037471 Bacteria 3122
2 JGI25156J39149_1000179 3300002705 Bacteria 46616
3 JGI25154J39366_1000186 3300002738 Bacteria 46616
4 JGI25154J39366_1000392 3300002738 Bacteria 23870
5 JGI25158J39367_1000957 3300002739 Bacteria 5333
6 JGI25157J39369_1000220 3300002741 Bacteria 46616
7 JGI25150J39212_1003364 3300002774 Bacteria 3756
8 JGI25159J45721_1001976 3300002987 Bacteria 8167
9 JGI25159J45721_1002709 3300002987 Bacteria 6585
10 rootL2_10065270 3300003322 Bacteria 5403
11 rootL2_10103796 3300003322 Bacteria 4330
12 JGI25161J50226_1000454 3300003374 Bacteria 19000
13 Ga0055529_1000068 3300003763 Bacteria 163911
14 Ga0055526_1000013 3300003771 Bacteria 233580
15 Ga0055526_1000048 3300003771 Bacteria 120076
16 Ga0055526_1000393 3300003771 Bacteria 35323
17 Ga0055526_1002816 3300003771 Bacteria 11517
18 Ga0055526_1004759 3300003771 Bacteria 8040
19 Ga0055537_1000318 3300003773 Bacteria 32892
20 Ga0055524_1000129 3300003775 Bacteria 88836
21 Ga0055524_1000450 3300003775 Bacteria 34034
22 Ga0055524_1006972 3300003775 Bacteria 4855
23 Ga0055524_1013898 3300003775 Bacteria 3010
24 Ga0055534_1000205 3300003784 Bacteria 43564
25 Ga0055534_1009255 3300003784 Bacteria 2156
26 Ga0055528_1000147 3300003790 Bacteria 57895
27 Ga0055530_10002121 3300003791 Bacteria 13188
28 Ga0055530_10003792 3300003791 Bacteria 8328
29 Ga0055540_1012210 3300003792 Bacteria 2713
30 Ga0055531_10000938 3300003794 Bacteria 23526
31 Ga0055543_1000256 3300004625 Bacteria 39861
32 Ga0065165_1000005 3300005262 Bacteria 370361
33 Ga0065165_1000455 3300005262 Bacteria 64259
34 Ga0065165_1000855 3300005262 Bacteria 39861
35 Ga0070681_10116860 3300005458 Bacteria 2604
36 Ga0068855_100001647 3300005563 Bacteria 27987
37 Ga0075366_10023843 3300006195 Bacteria 3566
38 Ga0079104_1005451 3300006946 Bacteria 5082
39 Ga0099826_10000001 3300006948 Bacteria 1155201
40 Ga0105251_10000056 3300009011 Bacteria 104296
41 Ga0105244_10009705 3300009036 Bacteria 5887
42 Ga0105250_10000038 3300009092 Bacteria 141225
43 Ga0157370_10118191 3300013104 Bacteria 2476
44 Ga0157369_10001160 3300013105 Bacteria 32867
45 Ga0182008_10000136 3300014497 Bacteria 55863
46 Ga0182008_10000667 3300014497 Bacteria 24883
47 Ga0182006_1000311 3300015261 Bacteria 42565
48 Ga0182007_10000020 3300015262 Bacteria 194053
49 Ga0182005_1000001 3300015265 Bacteria 1014869
50 Ga0163161_10127372 3300017792 Bacteria 1918
51 Ga0213872_10000032 3300021361 Bacteria 138939
52 Ga0213872_10000110 3300021361 Bacteria 75510
53 Ga0213872_10000139 3300021361 Bacteria 65459
54 Ga0213872_10000166 3300021361 Bacteria 59987
55 Ga0209435_100034 3300025206 Bacteria 144486
56 Ga0209436_103038 3300025208 Bacteria 4641
57 Ga0209437_102022 3300025233 Bacteria 4149
58 Ga0207425_1000056 3300025245 Bacteria 151802
59 Ga0207425_1000222 3300025245 Bacteria 44610
60 Ga0209646_1000007 3300025246 Bacteria 670994
61 Ga0209646_1000118 3300025246 Bacteria 149446
62 Ga0209026_1000106 3300025250 Bacteria 149446
63 Ga0209759_1000455 3300025256 Bacteria 46668
64 Ga0209129_1003259 3300025258 Bacteria 7196
65 Ga0209565_1000003 3300025263 Bacteria 1099648
66 Ga0209565_1002998 3300025263 Bacteria 5722
67 Ga0209565_1004915 3300025263 Bacteria 3982
68 Ga0209565_1007734 3300025263 Bacteria 2870
69 Ga0209455_1000026 3300025272 Bacteria 653778
70 Ga0209673_1000003 3300025273 Bacteria 980859
71 Ga0209130_1000254 3300025284 Bacteria 67210
72 Ga0209130_1000618 3300025284 Bacteria 34032
73 Ga0209130_1005352 3300025284 Bacteria 4485
74 Ga0209675_1000003 3300025291 Bacteria 1003982
75 Ga0209675_1001893 3300025291 Bacteria 11282
76 Ga0209676_1001814 3300025292 Bacteria 17836
77 Ga0209025_1002993 3300025294 Bacteria 16742
78 Ga0209564_1000002 3300025295 Bacteria 1636803
79 Ga0209564_1000007 3300025295 Bacteria 1028582
80 Ga0209564_1000012 3300025295 Bacteria 792078
81 Ga0209564_1000272 3300025295 Bacteria 108384
82 Ga0209564_1005477 3300025295 Bacteria 7225
83 Ga0209564_1006150 3300025295 Bacteria 6577
84 Ga0209758_1003653 3300025297 Bacteria 13719
85 Ga0209050_1000011 3300025298 Bacteria 914037
86 Ga0209050_1000164 3300025298 Bacteria 154628
87 Ga0209050_1001824 3300025298 Bacteria 20728
88 Ga0209256_1000285 3300025299 Bacteria 88890
89 Ga0209256_1000427 3300025299 Bacteria 66034
90 Ga0209256_1000431 3300025299 Bacteria 65392
91 Ga0209256_1010245 3300025299 Bacteria 3956
92 Ga0207426_1004053 3300025302 Bacteria 7405
93 Ga0209051_1006777 3300025303 Bacteria 6386
94 Ga0209257_1000003 3300025304 Bacteria 1702593
95 Ga0209257_1005240 3300025304 Bacteria 9271
96 Ga0207696_1000123 3300025711 Bacteria 141297
97 Ga0207655_1012986 3300025728 Bacteria 4816
98 Ga0207713_1000097 3300025735 Bacteria 144844
99 Ga0207652_10137533 3300025921 Bacteria 2183
100 Ga0207667_10000032 3300025949 Bacteria 322253
101 Ga0209281_1012158 3300027111 Bacteria 1901
102 Ga0209282_1000001 3300027666 Bacteria 2450367
103 Ga0307515_10000997 3300028794 Bacteria 64733
104 Ga0265332_10001955 3300031238 Bacteria 10860
105 Ga0307513_10023653 3300031456 Bacteria 7173
106 Ga0307408_100000146 3300031548 Bacteria 78996
107 Ga0307408_100000196 3300031548 Bacteria 65663
108 Ga0307408_100001328 3300031548 Bacteria 18536
109 Ga0307408_100005627 3300031548 Bacteria 8378
110 Ga0307514_10000694 3300031649 Bacteria 59136
111 Ga0373931_0015867 3300035691 Bacteria 3699
112 Ga0395899_0005981 3300037312 Bacteria 9448
113 Ga0395900_0009268 3300037418 Bacteria 10092
114 Ga0395901_0162077 3300038443 Bacteria 2349
115 Ga0436365_0138474 3300039437 Bacteria 2893
116 Ga0436361_0062004 3300039447 Bacteria 42438
117 Ga0436361_0074316 3300039447 Bacteria 11663
118 Ga0436361_0109804 3300039447 Bacteria 64871
119 Ga0436361_0127902 3300039447 Bacteria 13425
120 Ga0436361_0657731 3300039447 Bacteria 46245
121 Ga0436361_0866054 3300039447 Bacteria 74597
122 Ga0451798_0108029 3300041458 Bacteria 2172
123 Ga0451800_0178225 3300041459 Bacteria 4229
124 Ga0451806_333391 3300041462 Bacteria 4492
125 Ga0451807_2567934 3300041486 Bacteria 4271
126 Ga0466969_0009137 3300044656 Bacteria 5256
127 Ga0466969_0011809 3300044656 Bacteria 4620
128 Ga0466972_0000094 3300044658 Bacteria 78156
129 Ga0466977_0008526 3300044666 Bacteria 5698
130 Ga0466966_0042389 3300044684 Bacteria 2921
131 Ga0466961_0000837 3300044693 Bacteria 19202
132 Ga0466970_0022454 3300044765 Bacteria 3293
133 Ga0466957_0001549 3300044842 Bacteria 12099
134 Ga0466959_0007220 3300045049 Bacteria 7784
135 Ga0466959_0064514 3300045049 Bacteria 2659
136 Ga0451576_0194091 3300045051 Bacteria 2121
137 Ga0495617_000042 3300046452 Bacteria 122225
138 Ga0495617_000609 3300046452 Bacteria 17990
139 Ga0495617_001169 3300046452 Bacteria 11866
140 Ga0495617_001451 3300046452 Bacteria 10406
141 Ga0495590_0000010 3300046457 Bacteria 317890
142 Ga0495590_0003023 3300046457 Bacteria 6893
143 Ga0495629_0039538 3300046459 Bacteria 3319
144 Ga0495638_0000019 3300046460 Bacteria 384671
145 Ga0495638_0000027 3300046460 Bacteria 337569
146 Ga0495638_0005813 3300046460 Bacteria 9072
147 Ga0495653_0000096 3300046463 Bacteria 73391
148 Ga0495653_0004548 3300046463 Bacteria 11211
149 Ga0495650_0000044 3300046471 Bacteria 355139
150 Ga0495650_0000066 3300046471 Bacteria 272883
151 Ga0495650_0000323 3300046471 Bacteria 85563
152 Ga0495650_0000432 3300046471 Bacteria 67492
153 Ga0495650_0001659 3300046471 Bacteria 20582
154 Ga0495650_0019727 3300046471 Bacteria 3308
155 Ga0495650_0026556 3300046471 Bacteria 2691
156 Ga0495580_0008719 3300046472 Bacteria 8038
157 Ga0495605_0000027 3300046474 Bacteria 220680
158 Ga0495605_0004509 3300046474 Bacteria 8156
159 Ga0495605_0019143 3300046474 Bacteria 3662
160 Ga0495639_0017341 3300046475 Bacteria 3127
161 Ga0495584_0000142 3300046491 Bacteria 49914
162 Ga0495584_0004458 3300046491 Bacteria 7533
163 Ga0495584_0005779 3300046491 Bacteria 6525
164 Ga0495584_0014943 3300046491 Bacteria 3956
165 Ga0495584_0016764 3300046491 Bacteria 3735
166 Ga0495585_0007954 3300046492 Bacteria 6445
167 Ga0495585_0098595 3300046492 Bacteria 1565
168 Ga0495594_0002965 3300046499 Bacteria 8800
169 Ga0495596_0001670 3300046500 Bacteria 12594
170 Ga0495596_0011448 3300046500 Bacteria 3827
171 Ga0495607_0001555 3300046501 Bacteria 20104
172 Ga0495607_0002502 3300046501 Bacteria 14890
173 Ga0495607_0002785 3300046501 Bacteria 13922
174 Ga0495607_0005302 3300046501 Bacteria 9270
175 Ga0495607_0005438 3300046501 Bacteria 9120
176 Ga0495607_0009215 3300046501 Bacteria 6708
177 Ga0495607_0014255 3300046501 Bacteria 5183
178 Ga0495607_0018329 3300046501 Bacteria 4465
179 Ga0495583_0000006 3300046506 Bacteria 436893
180 Ga0495583_0000021 3300046506 Bacteria 287046
181 Ga0495583_0001377 3300046506 Bacteria 24914
182 Ga0495583_0012798 3300046506 Bacteria 4723
183 Ga0495606_0000089 3300046507 Bacteria 154743
184 Ga0495606_0000125 3300046507 Bacteria 130102
185 Ga0495606_0000128 3300046507 Bacteria 128179
186 Ga0495606_0000147 3300046507 Bacteria 122261
187 Ga0495606_0000396 3300046507 Bacteria 73433
188 Ga0495606_0000996 3300046507 Bacteria 41305
189 Ga0495606_0001646 3300046507 Bacteria 29110
190 Ga0495606_0009554 3300046507 Bacteria 8190
191 Ga0495606_0039386 3300046507 Bacteria 3186
192 Ga0495606_0073788 3300046507 Bacteria 2139
193 Ga0495610_0000008 3300046512 Bacteria 622732
194 Ga0495610_0000953 3300046512 Bacteria 26784
195 Ga0495610_0004879 3300046512 Bacteria 9752
196 Ga0495610_0030148 3300046512 Bacteria 2846
197 Ga0495610_0031764 3300046512 Bacteria 2751
198 Ga0495610_0042004 3300046512 Bacteria 2291
199 Ga0495616_0005613 3300046513 Bacteria 7678
200 Ga0495616_0016943 3300046513 Bacteria 4024
201 Ga0495616_0024442 3300046513 Bacteria 3241
202 Ga0495632_0001305 3300046519 Bacteria 21094
203 Ga0495637_0001414 3300046520 Bacteria 14185
204 Ga0495637_0002744 3300046520 Bacteria 9578
205 Ga0495637_0007365 3300046520 Bacteria 5462
206 Ga0495643_0000022 3300046522 Bacteria 289691
207 Ga0495643_0000065 3300046522 Bacteria 179031
208 Ga0495644_0000570 3300046523 Bacteria 15470
209 Ga0495644_0001865 3300046523 Bacteria 8501
210 Ga0495648_0000078 3300046524 Bacteria 127397
211 Ga0495648_0000223 3300046524 Bacteria 64966
212 Ga0495648_0004798 3300046524 Bacteria 11426
213 Ga0495648_0007448 3300046524 Bacteria 8755
214 Ga0495648_0025675 3300046524 Bacteria 3984
215 Ga0495648_0047554 3300046524 Bacteria 2650
216 Ga0495648_0072311 3300046524 Bacteria 1996
217 Ga0495666_0000197 3300046526 Bacteria 25860
218 Ga0495642_0002053 3300046528 Bacteria 8367
219 Ga0495642_0015000 3300046528 Bacteria 3008
220 Ga0495642_0028183 3300046528 Bacteria 2237
221 Ga0495652_0062722 3300046529 Bacteria 3133
222 Ga0495654_0000002 3300046530 Bacteria 1021205
223 Ga0495654_0004700 3300046530 Bacteria 8046
224 Ga0495665_0021621 3300046531 Bacteria 3458
225 Ga0495586_0004579 3300046535 Bacteria 7390
226 Ga0495609_0000097 3300046538 Bacteria 103246
227 Ga0495609_0000878 3300046538 Bacteria 22029
228 Ga0495609_0000939 3300046538 Bacteria 21080
229 Ga0495609_0007214 3300046538 Bacteria 5574
230 Ga0495597_0000035 3300046542 Bacteria 119038
231 Ga0495597_0000107 3300046542 Bacteria 73749
232 Ga0495597_0036725 3300046542 Bacteria 2204
233 Ga0495622_0000009 3300046557 Bacteria 224622
234 Ga0495622_0000043 3300046557 Bacteria 115796
235 Ga0495622_0039013 3300046557 Bacteria 2211
236 Ga0495633_0000024 3300046558 Bacteria 225077
237 Ga0495633_0000033 3300046558 Bacteria 186714
238 Ga0495633_0000839 3300046558 Bacteria 27056
239 Ga0495633_0001611 3300046558 Bacteria 17077
240 Ga0495633_0002860 3300046558 Bacteria 11846
241 Ga0495633_0003324 3300046558 Bacteria 10801
242 Ga0495633_0004638 3300046558 Bacteria 8655
243 Ga0495633_0016790 3300046558 Bacteria 3761
244 Ga0495633_0055216 3300046558 Bacteria 1867
245 Ga0495633_0082509 3300046558 Bacteria 1496
246 Ga0495656_0010165 3300046615 Bacteria 3411
247 Ga0495656_0038152 3300046615 Bacteria 1988
248 Ga0495656_0102040 3300046615 Bacteria 1328
249 Ga0495668_0000006 3300046616 Bacteria 553404
250 Ga0495668_0000027 3300046616 Bacteria 297194
251 Ga0495668_0000096 3300046616 Bacteria 139693
252 Ga0495668_0001950 3300046616 Bacteria 18307
253 Ga0495634_0025307 3300046642 Bacteria 4155
254 Ga0495611_0000159 3300046648 Bacteria 48631
255 Ga0495611_0002496 3300046648 Bacteria 8375
256 Ga0495611_0009630 3300046648 Bacteria 4081
257 Ga0495625_0000053 3300046660 Bacteria 190575
258 Ga0495625_0001097 3300046660 Bacteria 35118
259 Ga0495625_0003659 3300046660 Bacteria 15067
260 Ga0495625_0003700 3300046660 Bacteria 14949
261 Ga0495625_0005518 3300046660 Bacteria 11498
262 Ga0495625_0010869 3300046660 Bacteria 7479
263 Ga0495625_0013583 3300046660 Bacteria 6534
264 Ga0495625_0032412 3300046660 Bacteria 3873
265 Ga0495635_0022170 3300046663 Bacteria 4423
266 Ga0495659_0003465 3300046664 Bacteria 5033
267 Ga0495659_0004881 3300046664 Bacteria 4222
268 Ga0495661_0006808 3300046665 Bacteria 8005
269 Ga0495661_0021173 3300046665 Bacteria 4241
270 Ga0495661_0022339 3300046665 Bacteria 4116
271 Ga0495661_0127258 3300046665 Bacteria 1400
272 Ga0495588_0003630 3300046674 Bacteria 6750
273 Ga0495588_0022424 3300046674 Bacteria 3121
274 Ga0495623_0003113 3300046679 Bacteria 10930
275 Ga0495669_0003195 3300046684 Bacteria 6746
276 Ga0495670_0005319 3300046691 Bacteria 6334
277 Ga0495670_0009601 3300046691 Bacteria 4752
278 Ga0495671_0000002 3300046692 Bacteria 1136189
279 Ga0495671_0000035 3300046692 Bacteria 188543
280 Ga0495671_0002776 3300046692 Bacteria 10954
281 Ga0495649_0000024 3300046694 Bacteria 175713
282 Ga0495649_0012288 3300046694 Bacteria 4990
283 Ga0495649_0027976 3300046694 Bacteria 3126
284 Ga0495660_0000408 3300046810 Bacteria 36733
285 Ga0495660_0005716 3300046810 Bacteria 7426
286 Ga0495660_0006187 3300046810 Bacteria 7105
287 Ga0495660_0009586 3300046810 Bacteria 5645
288 Ga0495660_0027398 3300046810 Bacteria 3224
289 Ga0495660_0040484 3300046810 Bacteria 2582
290 Ga0495604_0045273 3300047317 Bacteria 3434
291 Ga0495604_0055123 3300047317 Bacteria 3065
292 Ga0495636_0000610 3300047318 Bacteria 13127
293 Ga0495636_0004933 3300047318 Bacteria 5231
294 Ga0495672_0000095 3300047320 Bacteria 143883
295 Ga0495672_0000405 3300047320 Bacteria 52391
296 Ga0495672_0000437 3300047320 Bacteria 49739
297 Ga0495672_0003344 3300047320 Bacteria 13818
298 Ga0495672_0004284 3300047320 Bacteria 11776
299 Ga0495672_0005028 3300047320 Bacteria 10579
300 Ga0495680_0028807 3300047322 Bacteria 4551
301 Ga0495683_0001673 3300047323 Bacteria 14114
302 Ga0495683_0010923 3300047323 Bacteria 4788
303 Ga0495687_000665 3300047443 Bacteria 39307
304 Ga0495687_001982 3300047443 Bacteria 17454
305 Ga0495687_002353 3300047443 Bacteria 15334
306 Ga0495687_025126 3300047443 Bacteria 2821
307 Ga0495675_0004146 3300047444 Bacteria 8773
308 Ga0495677_0002543 3300047445 Bacteria 7129
309 Ga0495677_0013441 3300047445 Bacteria 2980
310 Ga0495679_002957 3300047446 Bacteria 8384
311 Ga0495679_006917 3300047446 Bacteria 4812
312 Ga0495679_011839 3300047446 Bacteria 3350
313 Ga0495685_000160 3300047447 Bacteria 22974
314 Ga0495685_001640 3300047447 Bacteria 6905
315 Ga0495673_0000005 3300047469 Bacteria 943364
316 Ga0495673_0000059 3300047469 Bacteria 233234
317 Ga0495673_0000064 3300047469 Bacteria 225793
318 Ga0495673_0009199 3300047469 Bacteria 5485
319 Ga0495681_0001213 3300047470 Bacteria 19614
320 Ga0495686_0019441 3300047472 Bacteria 4537
321 Ga0495686_0070082 3300047472 Bacteria 2160
322 Ga0495593_0018211 3300047673 Bacteria 3949
323 Ga0495626_0000004 3300048091 Bacteria 356599
324 Ga0495626_0003342 3300048091 Bacteria 10343
325 Ga0495626_0009565 3300048091 Bacteria 5233
326 Ga0496103_0004597 3300048906 Bacteria 8359
327 Ga0496111_0004219 3300048914 Bacteria 9053
328 Ga0496116_0023148 3300048919 Bacteria 4634
329 Ga0496117_0000094 3300048920 Bacteria 201853
330 Ga0496118_0000071 3300048921 Bacteria 201853
331 Ga0496118_0001737 3300048921 Bacteria 31652
332 Ga0496121_0000129 3300048924 Bacteria 168148
333 Ga0496121_0004677 3300048924 Bacteria 18175
334 Ga0496121_0006445 3300048924 Bacteria 14559
335 Ga0496121_0057828 3300048924 Bacteria 3211
336 Ga0496122_0001554 3300048925 Bacteria 36412
337 Ga0496122_0088822 3300048925 Bacteria 2116
338 Ga0496123_0000068 3300048926 Bacteria 208797
339 Ga0496123_0009176 3300048926 Bacteria 8943
340 Ga0496124_0029369 3300048927 Bacteria 4901
341 Ga0496124_0032232 3300048927 Bacteria 4630
342 Ga0496124_0192508 3300048927 Bacteria 1559
343 Ga0496125_0115567 3300048928 Bacteria 1929
344 Ga0496126_0003090 3300048929 Bacteria 21525
345 Ga0495678_000071 3300049459 Bacteria 128709
346 Ga0495678_001814 3300049459 Bacteria 15701
347 Ga0495678_024943 3300049459 Bacteria 2574
348 Ga0495682_0000266 3300049460 Bacteria 41296
349 Ga0495682_0002839 3300049460 Bacteria 7989
350 Ga0495682_0004332 3300049460 Bacteria 6101
351 Ga0501037_0027406 3300049573 Bacteria 4209
352 Ga0501227_002250 3300049665 Bacteria 4271
353 Ga0501269_000856 3300049766 Bacteria 4593
354 Ga0501044_0083548 3300049823 Bacteria 3229
355 nmdc:mga0k408_23608_c1 3300050493 Bacteria 3471
356 Ga0500594_0008676 3300053118 Bacteria 2322
357 Ga0500618_000230 3300053125 Bacteria 44012
358 Ga0500618_000381 3300053125 Bacteria 30623
359 Ga0500586_028929 3300053145 Bacteria 1813
360 2511386803 2511231026 Bacteria 5225445
361 2601669162 2600255292 Bacteria 6300551
362 2643792203 2643221554 Bacteria 6603920
363 2643993361 2643221596 Bacteria 5006805
364 2644212309 2643221638 Bacteria 6579467
365 2644251168 2643221645 Bacteria 7207331
366 2644357295 2643221664 Bacteria 7272945
367 2738718391 2738541277 Bacteria 7458140
368 2738739903 2738541280 Bacteria 6630198
369 2738828530 2738541297 Bacteria 6549566
370 2738844343 2738541300 Bacteria 6675882
371 2739152326 2738541357 Bacteria 6549408
372 2739194246 2738543003 Bacteria 6549560
373 2739274097 2738543018 Bacteria 6718814
374 2739281578 2738543019 Bacteria 7459457
375 2739320722 2738543026 Bacteria 6549408
376 2739338963 2738543029 Bacteria 6549249
377 2739343141 2738543030 Bacteria 6719714
378 2765568001 2765235838 Bacteria 5445269
379 2809145406 2808606418 Bacteria 6724496
380 2821132773 2821131069 Bacteria 6108407
381 2839097700 2839094727 Bacteria 5534556
382 2842717506 2842711865 Bacteria 7155354
383 2855731802 2855730933 Bacteria 7047938
384 2855768508 2855767633 Bacteria 7049357
385 2857551244 2857547612 Bacteria 6179999
386 2857561997 2857558681 Bacteria 6617694
387 2857568689 2857564685 Bacteria 6290584
388 2884087323 2884086401 Bacteria 5005459
389 2885084107 2885080285 Bacteria 6355622
390 2904426975 2904424332 Bacteria 7633521
391 2919046865 2919046199 Bacteria 5567169
392 2928115069 2928108538 Bacteria 7360024
393 2928131645 2928130867 Bacteria 5467269
394 2928142110 2928135762 Bacteria 7259641
395 2932413176 2932410948 Bacteria 6312192
396 2932417237 2932416698 Bacteria 6315112
397 8002393378 8002392321 Bacteria 4159911
398 Ga0395905_0077137
399 JGI25156J39149_1000179
400 JGI25154J39366_1000186
401 JGI25154J39366_1000392
402 JGI25158J39367_1000957
403 JGI25157J39369_1000220
404 JGI25150J39212_1003364
405 JGI25159J45721_1001976
406 JGI25159J45721_1002709
407 rootL2_10065270
408 rootL2_10103796
409 JGI25161J50226_1000454
410 Ga0055529_1000068
411 Ga0055526_1000013
412 Ga0055526_1000048
413 Ga0055526_1000393
414 Ga0055526_1002816
415 Ga0055526_1004759
416 Ga0055537_1000318
417 Ga0055524_1000129
418 Ga0055524_1000450
419 Ga0055524_1006972
420 Ga0055524_1013898
421 Ga0055534_1000205
422 Ga0055534_1009255
423 Ga0055528_1000147
424 Ga0055530_10002121
425 Ga0055530_10003792
426 Ga0055540_1012210
427 Ga0055531_10000938
428 Ga0055543_1000256
429 Ga0065165_1000005
430 Ga0065165_1000455
431 Ga0065165_1000855
432 Ga0070681_10116860
433 Ga0068855_100001647
434 Ga0075366_10023843
435 Ga0079104_1005451
436 Ga0099826_10000001
437 Ga0105251_10000056
438 Ga0105244_10009705
439 Ga0105250_10000038
440 Ga0157370_10118191
441 Ga0157369_10001160
442 Ga0182008_10000136
443 Ga0182008_10000667
444 Ga0182006_1000311
445 Ga0182007_10000020
446 Ga0182005_1000001
447 Ga0163161_10127372
448 Ga0213872_10000032
449 Ga0213872_10000110
450 Ga0213872_10000139
451 Ga0213872_10000166
452 Ga0209435_100034
453 Ga0209436_103038
454 Ga0209437_102022
455 Ga0207425_1000056
456 Ga0207425_1000222
457 Ga0209646_1000007
458 Ga0209646_1000118
459 Ga0209026_1000106
460 Ga0209759_1000455
461 Ga0209129_1003259
462 Ga0209565_1000003
463 Ga0209565_1002998
464 Ga0209565_1004915
465 Ga0209565_1007734
466 Ga0209455_1000026
467 Ga0209673_1000003
468 Ga0209130_1000254
469 Ga0209130_1000618
470 Ga0209130_1005352
471 Ga0209675_1000003
472 Ga0209675_1001893
473 Ga0209676_1001814
474 Ga0209025_1002993
475 Ga0209564_1000002
476 Ga0209564_1000007
477 Ga0209564_1000012
478 Ga0209564_1000272
479 Ga0209564_1005477
480 Ga0209564_1006150
481 Ga0209758_1003653
482 Ga0209050_1000011
483 Ga0209050_1000164
484 Ga0209050_1001824
485 Ga0209256_1000285
486 Ga0209256_1000427
487 Ga0209256_1000431
488 Ga0209256_1010245
489 Ga0207426_1004053
490 Ga0209051_1006777
491 Ga0209257_1000003
492 Ga0209257_1005240
493 Ga0207696_1000123
494 Ga0207655_1012986
495 Ga0207713_1000097
496 Ga0207652_10137533
497 Ga0207667_10000032
498 Ga0209281_1012158
499 Ga0209282_1000001
500 Ga0307515_10000997
501 Ga0265332_10001955
502 Ga0307513_10023653
503 Ga0307408_100000146
504 Ga0307408_100000196
505 Ga0307408_100001328
506 Ga0307408_100005627
507 Ga0307514_10000694
508 Ga0373931_0015867
509 Ga0395899_0005981
510 Ga0395900_0009268
511 Ga0395901_0162077
512 Ga0436365_0138474
513 Ga0436361_0062004
514 Ga0436361_0074316
515 Ga0436361_0109804
516 Ga0436361_0127902
517 Ga0436361_0657731
518 Ga0436361_0866054
519 Ga0451798_0108029
520 Ga0451800_0178225
521 Ga0451806_333391
522 Ga0451807_2567934
523 Ga0466969_0009137
524 Ga0466969_0011809
525 Ga0466972_0000094
526 Ga0466977_0008526
527 Ga0466966_0042389
528 Ga0466961_0000837
529 Ga0466970_0022454
530 Ga0466957_0001549
531 Ga0466959_0007220
532 Ga0466959_0064514
533 Ga0451576_0194091
534 Ga0495617_000042
535 Ga0495617_000609
536 Ga0495617_001169
537 Ga0495617_001451
538 Ga0495590_0000010
539 Ga0495590_0003023
540 Ga0495629_0039538
541 Ga0495638_0000019
542 Ga0495638_0000027
543 Ga0495638_0005813
544 Ga0495653_0000096
545 Ga0495653_0004548
546 Ga0495650_0000044
547 Ga0495650_0000066
548 Ga0495650_0000323
549 Ga0495650_0000432
550 Ga0495650_0001659
551 Ga0495650_0019727
552 Ga0495650_0026556
553 Ga0495580_0008719
554 Ga0495605_0000027
555 Ga0495605_0004509
556 Ga0495605_0019143
557 Ga0495639_0017341
558 Ga0495584_0000142
559 Ga0495584_0004458
560 Ga0495584_0005779
561 Ga0495584_0014943
562 Ga0495584_0016764
563 Ga0495585_0007954
564 Ga0495585_0098595
565 Ga0495594_0002965
566 Ga0495596_0001670
567 Ga0495596_0011448
568 Ga0495607_0001555
569 Ga0495607_0002502
570 Ga0495607_0002785
571 Ga0495607_0005302
572 Ga0495607_0005438
573 Ga0495607_0009215
574 Ga0495607_0014255
575 Ga0495607_0018329
576 Ga0495583_0000006
577 Ga0495583_0000021
578 Ga0495583_0001377
579 Ga0495583_0012798
580 Ga0495606_0000089
581 Ga0495606_0000125
582 Ga0495606_0000128
583 Ga0495606_0000147
584 Ga0495606_0000396
585 Ga0495606_0000996
586 Ga0495606_0001646
587 Ga0495606_0009554
588 Ga0495606_0039386
589 Ga0495606_0073788
590 Ga0495610_0000008
591 Ga0495610_0000953
592 Ga0495610_0004879
593 Ga0495610_0030148
594 Ga0495610_0031764
595 Ga0495610_0042004
596 Ga0495616_0005613
597 Ga0495616_0016943
598 Ga0495616_0024442
599 Ga0495632_0001305
600 Ga0495637_0001414
601 Ga0495637_0002744
602 Ga0495637_0007365
603 Ga0495643_0000022
604 Ga0495643_0000065
605 Ga0495644_0000570
606 Ga0495644_0001865
607 Ga0495648_0000078
608 Ga0495648_0000223
609 Ga0495648_0004798
610 Ga0495648_0007448
611 Ga0495648_0025675
612 Ga0495648_0047554
613 Ga0495648_0072311
614 Ga0495666_0000197
615 Ga0495642_0002053
616 Ga0495642_0015000
617 Ga0495642_0028183
618 Ga0495652_0062722
619 Ga0495654_0000002
620 Ga0495654_0004700
621 Ga0495665_0021621
622 Ga0495586_0004579
623 Ga0495609_0000097
624 Ga0495609_0000878
625 Ga0495609_0000939
626 Ga0495609_0007214
627 Ga0495597_0000035
628 Ga0495597_0000107
629 Ga0495597_0036725
630 Ga0495622_0000009
631 Ga0495622_0000043
632 Ga0495622_0039013
633 Ga0495633_0000024
634 Ga0495633_0000033
635 Ga0495633_0000839
636 Ga0495633_0001611
637 Ga0495633_0002860
638 Ga0495633_0003324
639 Ga0495633_0004638
640 Ga0495633_0016790
641 Ga0495633_0055216
642 Ga0495633_0082509
643 Ga0495656_0010165
644 Ga0495656_0038152
645 Ga0495656_0102040
646 Ga0495668_0000006
647 Ga0495668_0000027
648 Ga0495668_0000096
649 Ga0495668_0001950
650 Ga0495634_0025307
651 Ga0495611_0000159
652 Ga0495611_0002496
653 Ga0495611_0009630
654 Ga0495625_0000053
655 Ga0495625_0001097
656 Ga0495625_0003659
657 Ga0495625_0003700
658 Ga0495625_0005518
659 Ga0495625_0010869
660 Ga0495625_0013583
661 Ga0495625_0032412
662 Ga0495635_0022170
663 Ga0495659_0003465
664 Ga0495659_0004881
665 Ga0495661_0006808
666 Ga0495661_0021173
667 Ga0495661_0022339
668 Ga0495661_0127258
669 Ga0495588_0003630
670 Ga0495588_0022424
671 Ga0495623_0003113
672 Ga0495669_0003195
673 Ga0495670_0005319
674 Ga0495670_0009601
675 Ga0495671_0000002
676 Ga0495671_0000035
677 Ga0495671_0002776
678 Ga0495649_0000024
679 Ga0495649_0012288
680 Ga0495649_0027976
681 Ga0495660_0000408
682 Ga0495660_0005716
683 Ga0495660_0006187
684 Ga0495660_0009586
685 Ga0495660_0027398
686 Ga0495660_0040484
687 Ga0495604_0045273
688 Ga0495604_0055123
689 Ga0495636_0000610
690 Ga0495636_0004933
691 Ga0495672_0000095
692 Ga0495672_0000405
693 Ga0495672_0000437
694 Ga0495672_0003344
695 Ga0495672_0004284
696 Ga0495672_0005028
697 Ga0495680_0028807
698 Ga0495683_0001673
699 Ga0495683_0010923
700 Ga0495687_000665
701 Ga0495687_001982
702 Ga0495687_002353
703 Ga0495687_025126
704 Ga0495675_0004146
705 Ga0495677_0002543
706 Ga0495677_0013441
707 Ga0495679_002957
708 Ga0495679_006917
709 Ga0495679_011839
710 Ga0495685_000160
711 Ga0495685_001640
712 Ga0495673_0000005
713 Ga0495673_0000059
714 Ga0495673_0000064
715 Ga0495673_0009199
716 Ga0495681_0001213
717 Ga0495686_0019441
718 Ga0495686_0070082
719 Ga0495593_0018211
720 Ga0495626_0000004
721 Ga0495626_0003342
722 Ga0495626_0009565
723 Ga0496103_0004597
724 Ga0496111_0004219
725 Ga0496116_0023148
726 Ga0496117_0000094
727 Ga0496118_0000071
728 Ga0496118_0001737
729 Ga0496121_0000129
730 Ga0496121_0004677
731 Ga0496121_0006445
732 Ga0496121_0057828
733 Ga0496122_0001554
734 Ga0496122_0088822
735 Ga0496123_0000068
736 Ga0496123_0009176
737 Ga0496124_0029369
738 Ga0496124_0032232
739 Ga0496124_0192508
740 Ga0496125_0115567
741 Ga0496126_0003090
742 Ga0495678_000071
743 Ga0495678_001814
744 Ga0495678_024943
745 Ga0495682_0000266
746 Ga0495682_0002839
747 Ga0495682_0004332
748 Ga0501037_0027406
749 Ga0501227_002250
750 Ga0501269_000856
751 Ga0501044_0083548
752 nmdc:mga0k408_23608_c1
753 Ga0500594_0008676
754 Ga0500618_000230
755 Ga0500618_000381
756 Ga0500586_028929
757 2511386803
758 2601669162
759 2643792203
760 2643993361
761 2644212309
762 2644251168
763 2644357295
764 2738718391
765 2738739903
766 2738828530
767 2738844343
768 2739152326
769 2739194246
770 2739274097
771 2739281578
772 2739320722
773 2739338963
774 2739343141
775 2765568001
776 2809145406
777 2821132773
778 2839097700
779 2842717506
780 2855731802
781 2855768508
782 2857551244
783 2857561997
784 2857568689
785 2884087323
786 2885084107
787 2904426975
788 2919046865
789 2928115069
790 2928131645
791 2928142110
792 2932413176
793 2932417237
794 8002393378

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00654

Voltage_CLC

Voltage gated chloride channel

94

425

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6d0j-assembly1.cif.gz_A crystal structure of a clc-type fluoride/proton antiporter 0.959 17 400
6d0k-assembly1.cif.gz_A crystal structure of a clc-type fluoride/proton antiporter, e118q mutant 0.9589 17 400
6d0n-assembly1.cif.gz_A crystal structure of a clc-type fluoride/proton antiporter, v319g mutant 0.9581 17 400
6d0j-assembly1.cif.gz_A crystal structure of a clc-type fluoride/proton antiporter 0.9307 17 400
6d0k-assembly1.cif.gz_A crystal structure of a clc-type fluoride/proton antiporter, e118q mutant 0.9305 17 400
ID Description Score Start End Superfamily
af_Q57753_14_393_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.9138 16 399 1.10.3080.10
af_Q57753_14_393_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.9069 16 399 1.10.3080.10
3nd0B00 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8858 19 402 1.10.3080.10
af_P96820_37_483_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8825 15 406 1.10.3080.10
af_P76175_1_418_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8678 18 404 1.10.3080.10
ID Description Score Start End GO Terms
AF-A0A7H4LUI5-F1-model_v4 Chloride channel protein 0.9911 277 397 GO:0005247
GO:0016020
AF-A0A4U9JTF2-F1-model_v4 deleted 0.9859 177 397
AF-A0A1I7GQW2-F1-model_v4 H+/Cl-antiporter ClcA 0.9847 13 400 GO:0005247
GO:0016020
AF-A0A3R9T5S3-F1-model_v4 Voltage-gated chloride channel protein 0.9841 208 397 GO:0005247
GO:0034707
AF-A0A009HYT7-F1-model_v4 Voltage gated chloride channel family protein 0.9819 98 398 GO:0005247
GO:0034707

Map