F435154

General Info

Members Datasets Scaffolds Average Seq Length
402 227 804 435

Family's Representative Sequence

Representative Sequence 3300042010|Ga0439452_000415|Ga0439452_000415_20320_21771
Length 483
Sequence MHHKENAQQQTDENGRSEDQNHHARAQAVVGHGVPLWDNQANYVYLRTISAMAQFYSAKRRVTTRQIITVEATDLDPFGQGVARHKGKTLFITGLLPGERADITLTEEKRQYARGQVKRRLNDSPERVMPRCPHFGVCGGCQQQHASTELQQKSKSSALARLVGHDVNDIIADRPWGYRRRARLSLSYQPKTERLEMGFRKAGSSDIVSVTQCPVLAPHLGALLPDVHHCLASLDDVRSLGHVELVLANSGPLMVLRHTAPLSKADREKLERFSHSHELALFLAPQSEILEQVSGEAPWYASDGLRLTFSPRDFIQVNDGVNQQMVANALAWLDVKPTDRVLDLFCGMGNFTLPLARRAASVVGVEGVEALVAKGQENAQQNGLQNVTFFHQNLEDDVTRQPWAKQGFDKILLDPARAGAPGVMQHIIKLAPERVVYVSCNPATLARDSEALLSGGYQIRRLAMLDMFPHTGHLESMVLFEHI

Samples

Sample ID Description Type Environment
1 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
4 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
5 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
8 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
9 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
10 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
11 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
12 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
20 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
21 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
22 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
32 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
33 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
34 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
35 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
55 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
60 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
61 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
62 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
63 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
64 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
65 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
66 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
67 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
68 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
69 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
70 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
71 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
72 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
73 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
74 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
75 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
76 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
77 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
78 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
79 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
80 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
81 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
82 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
83 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
84 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
85 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
86 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
90 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
91 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
92 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
93 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
94 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
95 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
96 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
97 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
98 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
99 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
100 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
101 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
102 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
103 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
104 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
105 2547132181 Kosakonia sacchari SP1 Isolate Stem
106 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
107 2561511199 Enterobacter sp. R4-368 Isolate Nodule
108 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
109 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
110 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
111 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
112 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
113 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
114 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
115 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
116 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
117 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
118 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
119 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
120 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
121 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
122 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
123 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
124 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
125 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
126 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
127 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
128 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
129 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
130 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
131 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
132 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
133 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
134 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
135 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
136 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
137 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
138 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
139 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
140 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
141 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
142 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
143 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
144 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
145 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
146 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
147 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
148 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
149 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
150 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
151 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
152 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
153 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
154 2636415599 Klebsiella variicola DX120E Isolate Unclassified
155 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
156 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
157 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
158 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
159 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
160 2681812869 Enterobacter ludwigii NFPP41 Isolate Rhizoplane
161 2706794495 Dickeya zeae ZJU1202 Isolate Unclassified
162 2711768156 Atlantibacter hermannii DDE1 Isolate Unclassified
163 2751185917 Enterobacter sp. HK169 Isolate Unclassified
164 2765235842 Enterobacter ludwigii AA4 Isolate Unclassified
165 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
166 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
167 2775507074 Klebsiella sp. D5A Isolate Unclassified
168 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
169 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
170 2791355275 Enterobacter sp. Sa187 Isolate Unclassified
171 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
172 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
173 2821118458 Enterobacter asburiae 609 Isolate Unclassified
174 2823373977 Enterobacter ludwigii NCR3 Isolate Rhizosphere
175 2844425489 Enterobacter cloacae SBP-8 Isolate Rhizosphere
176 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
177 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
178 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
179 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
180 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
181 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
182 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
183 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
184 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
185 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
186 2891670763 Buttiauxella sp. B2 Isolate Rhizosphere
187 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
188 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
189 2904504865 Serratia marcescens 1822 Isolate Unclassified
190 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
191 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
192 2919150387 Rahnella aceris 1817 Isolate Unclassified
193 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
194 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
195 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
196 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
197 2927143783 Rahnella sp. 2050 Isolate Unclassified
198 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
199 2932406140 Serratia sp. 2723 Isolate Rhizosphere
200 2935625433 Kosakonia sp. 1610 Isolate Rhizosphere
201 2937539931 Pantoea sp. LS15 Isolate Unclassified
202 2937967321 Serratia sp. YC16 Isolate Unclassified
203 2939568625 Lelliottia sp. 489 Isolate Rhizosphere
204 2939573065 Citrobacter sp. 506 Isolate Rhizosphere
205 2939577877 Serratia sp. 509 Isolate Rhizosphere
206 2939607340 Leclercia sp. 1548 Isolate Rhizosphere
207 2939617950 Kosakonia cowanii 2056 Isolate Rhizosphere
208 2939642701 Lelliottia nimipressuralis 2756 Isolate Rhizosphere
209 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
210 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
211 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
212 2974310843 Enterobacter sp. SORGH_AS 287 Isolate Unclassified
213 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
214 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
215 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
216 8004592986 Serratia sp. S119 Isolate Unclassified
217 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
218 8018221730 Enterobacter sp. CM29 Isolate Unclassified
219 8018405270 Enterobacter sp. 198 Isolate Rhizosphere
220 8019504834 Atlantibacter hermannii 1903 Isolate Rhizosphere
221 8054844752 Dryocola boscaweniae H18W14 Isolate Rhizosphere
222 8054849141 Dryocola clanedunensis H11S18 Isolate Rhizosphere
223 8055087960 Silvania hatchlandensis H19S6 Isolate Rhizosphere
224 8055092621 Silvania confinis H4N4 Isolate Rhizosphere
225 8055097453 Leclercia tamurae H6W5 Isolate Rhizosphere
226 8055693939 Hafnia alvei A23BA Isolate Rhizosphere
227 8057304971 Scandinavium manionii H17S15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.15
Metatranscriptomes 0
Isolates 30.85

Biome Distribution

Category Percentage (%)
Aerial Root 0.5
Bulb 0
Endosphere 5.47
Nodule 4.98
Rhizoplane 13.68
Rhizosphere 47.51
Stem 0.25
Stem Tuber 1.49
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439452_000415 3300042010 Bacteria 25018
2 JGI25162J39368_1000029 3300002737 Bacteria 220066
3 JGI25163J39215_1000037 3300002771 Bacteria 61773
4 JGI25164J39214_1000008 3300002772 Bacteria 311285
5 JGI25152J39213_1000406 3300002773 Bacteria 26126
6 rootH2_10044059 3300003320 Bacteria 5776
7 Ga0055538_1000014 3300003751 Bacteria 311285
8 Ga0055539_1000020 3300003752 Bacteria 311285
9 Ga0055533_1000027 3300003756 Bacteria 311285
10 Ga0055525_1000032 3300003759 Bacteria 311285
11 Ga0055541_1000014 3300003841 Bacteria 311285
12 Ga0058692_1003339 3300003856 Bacteria 4979
13 Ga0058692_1006895 3300003856 Bacteria 3065
14 Ga0058692_1017083 3300003856 Bacteria 1597
15 Ga0058692_1017085 3300003856 Bacteria 1597
16 Ga0065704_10000379 3300005289 Bacteria 25256
17 Ga0065704_10000930 3300005289 Bacteria 10846
18 Ga0065704_10001263 3300005289 Bacteria 8607
19 Ga0065704_10001839 3300005289 Bacteria 8876
20 Ga0065704_10074186 3300005289 Bacteria 6463
21 Ga0070659_100039473 3300005366 Bacteria 3686
22 Ga0070665_100000033 3300005548 Bacteria 332530
23 Ga0068857_100000173 3300005577 Bacteria 40858
24 Ga0068851_10037926 3300005834 Bacteria 2417
25 Ga0075364_10006536 3300006051 Bacteria 6857
26 Ga0079104_1000039 3300006946 Bacteria 188434
27 Ga0079104_1000074 3300006946 Bacteria 150348
28 Ga0079104_1000704 3300006946 Bacteria 30381
29 Ga0079104_1000856 3300006946 Bacteria 25272
30 Ga0079104_1001206 3300006946 Bacteria 18396
31 Ga0079104_1002172 3300006946 Bacteria 11079
32 Ga0079104_1004030 3300006946 Bacteria 6502
33 Ga0079104_1006022 3300006946 Bacteria 4693
34 Ga0079104_1027663 3300006946 Bacteria 1450
35 Ga0105251_10000129 3300009011 Bacteria 75652
36 Ga0105251_10000774 3300009011 Bacteria 29042
37 Ga0105251_10002541 3300009011 Bacteria 14188
38 Ga0105251_10002858 3300009011 Bacteria 13038
39 Ga0105251_10003623 3300009011 Bacteria 11099
40 Ga0105251_10003630 3300009011 Bacteria 11082
41 Ga0105251_10005608 3300009011 Bacteria 8164
42 Ga0105244_10000023 3300009036 Bacteria 233110
43 Ga0105244_10000225 3300009036 Bacteria 58370
44 Ga0105244_10000257 3300009036 Bacteria 53917
45 Ga0105244_10000790 3300009036 Bacteria 26939
46 Ga0105244_10001773 3300009036 Bacteria 16960
47 Ga0105244_10004037 3300009036 Bacteria 10248
48 Ga0105244_10006170 3300009036 Bacteria 7818
49 Ga0105244_10015376 3300009036 Bacteria 4390
50 Ga0105244_10053848 3300009036 Bacteria 2043
51 Ga0105250_10000027 3300009092 Bacteria 212624
52 Ga0105250_10000042 3300009092 Bacteria 130495
53 Ga0105250_10000086 3300009092 Bacteria 81683
54 Ga0105250_10002787 3300009092 Bacteria 8573
55 Ga0105250_10010090 3300009092 Bacteria 3945
56 Ga0105250_10019486 3300009092 Bacteria 2743
57 Ga0105250_10019810 3300009092 Bacteria 2721
58 Ga0105240_10217283 3300009093 Bacteria 2229
59 Ga0105243_10000844 3300009148 Bacteria 29099
60 Ga0105243_10030567 3300009148 Bacteria 4148
61 Ga0105241_10000008 3300009174 Bacteria 334281
62 Ga0157373_10012535 3300013100 Bacteria 6233
63 Ga0157373_10073717 3300013100 Bacteria 2409
64 Ga0157371_10000067 3300013102 Bacteria 168242
65 Ga0157371_10000778 3300013102 Bacteria 36656
66 Ga0157371_10010134 3300013102 Bacteria 7363
67 Ga0157371_10035567 3300013102 Bacteria 3569
68 Ga0157371_10070604 3300013102 Bacteria 2472
69 Ga0157370_10001927 3300013104 Bacteria 25522
70 Ga0157370_10009422 3300013104 Bacteria 10436
71 Ga0157369_10000420 3300013105 Bacteria 56126
72 Ga0157372_10004203 3300013307 Bacteria 15413
73 Ga0157372_10011763 3300013307 Bacteria 9321
74 Ga0157372_10028806 3300013307 Bacteria 6061
75 Ga0182006_1000013 3300015261 Bacteria 363224
76 Ga0183366_1002 3300015679 Bacteria 791639
77 Ga0183370_1002 3300015680 Bacteria 791639
78 Ga0183369_1002 3300015685 Bacteria 791621
79 Ga0183368_1005 3300015687 Bacteria 791621
80 Ga0213876_10000113 3300021384 Bacteria 88982
81 Ga0209760_100256 3300025207 Bacteria 21361
82 Ga0209784_100030 3300025224 Bacteria 327457
83 Ga0209566_100034 3300025225 Bacteria 327457
84 Ga0209674_100052 3300025226 Bacteria 327457
85 Ga0209563_100054 3300025230 Bacteria 327457
86 Ga0207427_100035 3300025231 Bacteria 311526
87 Ga0209437_100068 3300025233 Bacteria 311526
88 Ga0209677_100032 3300025253 Bacteria 327457
89 Ga0209129_1000221 3300025258 Bacteria 64902
90 Ga0209233_1009195 3300025261 Bacteria 3018
91 Ga0207696_1000008 3300025711 Bacteria 568181
92 Ga0207696_1000012 3300025711 Bacteria 527363
93 Ga0207696_1000024 3300025711 Bacteria 420123
94 Ga0207696_1000027 3300025711 Bacteria 412783
95 Ga0207696_1000173 3300025711 Bacteria 102240
96 Ga0207696_1000798 3300025711 Bacteria 20443
97 Ga0207696_1002472 3300025711 Bacteria 9038
98 Ga0207696_1007427 3300025711 Bacteria 4293
99 Ga0207655_1000020 3300025728 Bacteria 524503
100 Ga0207655_1000044 3300025728 Bacteria 327511
101 Ga0207655_1000054 3300025728 Bacteria 281894
102 Ga0207655_1000056 3300025728 Bacteria 279166
103 Ga0207655_1000088 3300025728 Bacteria 205698
104 Ga0207655_1000103 3300025728 Bacteria 185076
105 Ga0207655_1000198 3300025728 Bacteria 106261
106 Ga0207655_1000705 3300025728 Bacteria 38723
107 Ga0207655_1002505 3300025728 Bacteria 14831
108 Ga0207713_1000025 3300025735 Bacteria 322749
109 Ga0207713_1000033 3300025735 Bacteria 273751
110 Ga0207713_1000082 3300025735 Bacteria 164992
111 Ga0207713_1000264 3300025735 Bacteria 64838
112 Ga0207713_1001835 3300025735 Bacteria 16216
113 Ga0207713_1004514 3300025735 Bacteria 9015
114 Ga0207713_1018423 3300025735 Bacteria 3459
115 Ga0207654_10000009 3300025911 Bacteria 334291
116 Ga0207690_10028602 3300025932 Bacteria 3534
117 Ga0207709_10002325 3300025935 Bacteria 12005
118 Ga0207709_10023909 3300025935 Bacteria 3483
119 Ga0207674_10000800 3300026116 Bacteria 40893
120 Ga0209281_1000025 3300027111 Bacteria 488275
121 Ga0209281_1000048 3300027111 Bacteria 322698
122 Ga0209281_1000054 3300027111 Bacteria 309505
123 Ga0209281_1000056 3300027111 Bacteria 307619
124 Ga0209281_1000066 3300027111 Bacteria 284953
125 Ga0209281_1000133 3300027111 Bacteria 188455
126 Ga0209281_1000541 3300027111 Bacteria 47496
127 Ga0209281_1000738 3300027111 Bacteria 31838
128 Ga0209281_1001131 3300027111 Bacteria 19023
129 Ga0209281_1001235 3300027111 Bacteria 16951
130 Ga0209371_1000013 3300027312 Bacteria 691516
131 Ga0209371_1000026 3300027312 Bacteria 449205
132 Ga0209371_1000130 3300027312 Bacteria 123367
133 Ga0209371_1000275 3300027312 Bacteria 59746
134 Ga0209371_1000851 3300027312 Bacteria 24747
135 Ga0209371_1002451 3300027312 Bacteria 10351
136 Ga0209371_1003054 3300027312 Bacteria 8602
137 Ga0209371_1003436 3300027312 Bacteria 7704
138 Ga0209371_1007089 3300027312 Bacteria 3986
139 Ga0209371_1007595 3300027312 Bacteria 3747
140 Ga0268266_10000196 3300028379 Bacteria 105261
141 Ga0268256_1000003 3300030500 Bacteria 1289401
142 Ga0268256_1000014 3300030500 Bacteria 691435
143 Ga0268256_1000017 3300030500 Bacteria 600718
144 Ga0268256_1000519 3300030500 Bacteria 32284
145 Ga0268256_1000767 3300030500 Bacteria 23409
146 Ga0268256_1001243 3300030500 Bacteria 15963
147 Ga0268256_1001799 3300030500 Bacteria 12072
148 Ga0268256_1007601 3300030500 Bacteria 3839
149 Ga0268256_1007833 3300030500 Bacteria 3747
150 Ga0268256_1010879 3300030500 Bacteria 2921
151 Ga0436365_0586130 3300039437 Bacteria 88094
152 Ga0439438_000042 3300041405 Bacteria 63992
153 Ga0439438_002546 3300041405 Bacteria 7728
154 Ga0439438_003281 3300041405 Bacteria 6613
155 Ga0439438_005338 3300041405 Bacteria 4750
156 Ga0439447_004046 3300041407 Bacteria 5120
157 Ga0439432_003684 3300042006 Bacteria 5670
158 Ga0439432_008806 3300042006 Bacteria 3530
159 Ga0439452_000013 3300042010 Bacteria 364058
160 Ga0439452_000357 3300042010 Bacteria 28066
161 Ga0439452_001261 3300042010 Bacteria 10748
162 Ga0450900_001158 3300042136 Bacteria 2472
163 Ga0450902_003788 3300042137 Bacteria 2231
164 Ga0439464_0004858 3300042439 Bacteria 3446
165 Ga0450893_0002010 3300042532 Bacteria 3169
166 Ga0466981_0000001 3300044669 Bacteria 367980
167 Ga0495591_000102 3300046458 Bacteria 98697
168 Ga0495591_004423 3300046458 Bacteria 6892
169 Ga0495638_0010931 3300046460 Bacteria 6276
170 Ga0495650_0000008 3300046471 Bacteria 688246
171 Ga0495650_0000059 3300046471 Bacteria 296253
172 Ga0495650_0000120 3300046471 Bacteria 184191
173 Ga0495584_0040509 3300046491 Bacteria 2352
174 Ga0495607_0049780 3300046501 Bacteria 2441
175 Ga0495606_0001700 3300046507 Bacteria 28418
176 Ga0495637_0045098 3300046520 Bacteria 1873
177 Ga0495648_0004464 3300046524 Bacteria 11950
178 Ga0495654_0000073 3300046530 Bacteria 115044
179 Ga0495654_0008927 3300046530 Bacteria 5508
180 Ga0495654_0014975 3300046530 Bacteria 4121
181 Ga0495654_0015954 3300046530 Bacteria 3980
182 Ga0495597_0001585 3300046542 Bacteria 15990
183 Ga0495625_0001852 3300046660 Bacteria 24132
184 Ga0495588_0011764 3300046674 Bacteria 4116
185 Ga0495671_0004415 3300046692 Bacteria 8418
186 Ga0495649_0002530 3300046694 Bacteria 12824
187 Ga0495649_0005925 3300046694 Bacteria 7663
188 Ga0495589_0005571 3300046794 Bacteria 6643
189 Ga0495660_0000019 3300046810 Bacteria 311047
190 Ga0495660_0000063 3300046810 Bacteria 129364
191 Ga0495672_0000003 3300047320 Bacteria 728845
192 Ga0495672_0000551 3300047320 Bacteria 42548
193 Ga0495679_000101 3300047446 Bacteria 77584
194 Ga0495679_013805 3300047446 Bacteria 3015
195 Ga0495673_0000011 3300047469 Bacteria 674140
196 Ga0495673_0000329 3300047469 Bacteria 61278
197 Ga0496101_0089578 3300048904 Bacteria 2287
198 Ga0496104_0004225 3300048907 Bacteria 12472
199 Ga0496104_0004586 3300048907 Bacteria 12041
200 Ga0496105_0024683 3300048908 Bacteria 4885
201 Ga0496116_0000096 3300048919 Bacteria 202230
202 Ga0496116_0002650 3300048919 Bacteria 18529
203 Ga0496116_0045279 3300048919 Bacteria 2979
204 Ga0496117_0000168 3300048920 Bacteria 137886
205 Ga0496117_0003066 3300048920 Bacteria 20025
206 Ga0496117_0003968 3300048920 Bacteria 16722
207 Ga0496117_0017102 3300048920 Bacteria 6071
208 Ga0496117_0030076 3300048920 Bacteria 4174
209 Ga0496117_0032682 3300048920 Bacteria 3949
210 Ga0496118_0006378 3300048921 Bacteria 12995
211 Ga0496118_0008828 3300048921 Bacteria 10318
212 Ga0496118_0010755 3300048921 Bacteria 9019
213 Ga0496118_0013886 3300048921 Bacteria 7577
214 Ga0496118_0017563 3300048921 Bacteria 6503
215 Ga0496118_0177717 3300048921 Bacteria 1290
216 Ga0496119_0001367 3300048922 Bacteria 29752
217 Ga0496119_0002824 3300048922 Bacteria 18583
218 Ga0496119_0004145 3300048922 Bacteria 14587
219 Ga0496119_0008687 3300048922 Bacteria 8878
220 Ga0496119_0009385 3300048922 Bacteria 8408
221 Ga0496119_0010432 3300048922 Bacteria 7818
222 Ga0496120_0001219 3300048923 Bacteria 32499
223 Ga0496120_0001483 3300048923 Bacteria 27899
224 Ga0496120_0001781 3300048923 Bacteria 24242
225 Ga0496120_0003161 3300048923 Bacteria 15361
226 Ga0496120_0004375 3300048923 Bacteria 11912
227 Ga0496120_0010515 3300048923 Bacteria 6449
228 Ga0496120_0016250 3300048923 Bacteria 4869
229 Ga0496120_0017770 3300048923 Bacteria 4598
230 Ga0496121_0002429 3300048924 Bacteria 28483
231 Ga0496121_0004042 3300048924 Bacteria 20149
232 Ga0496121_0014740 3300048924 Bacteria 8258
233 Ga0496121_0030375 3300048924 Bacteria 4963
234 Ga0496121_0033700 3300048924 Bacteria 4628
235 Ga0496121_0059239 3300048924 Bacteria 3158
236 Ga0496122_0000016 3300048925 Bacteria 443353
237 Ga0496122_0000213 3300048925 Bacteria 129218
238 Ga0496122_0000339 3300048925 Bacteria 101614
239 Ga0496122_0001139 3300048925 Bacteria 45609
240 Ga0496122_0005835 3300048925 Bacteria 14458
241 Ga0496122_0034275 3300048925 Bacteria 4157
242 Ga0496122_0059611 3300048925 Bacteria 2816
243 Ga0496122_0069096 3300048925 Bacteria 2532
244 Ga0496122_0103829 3300048925 Bacteria 1890
245 Ga0496123_0000177 3300048926 Bacteria 129218
246 Ga0496123_0000444 3300048926 Bacteria 74191
247 Ga0496123_0001212 3300048926 Bacteria 37613
248 Ga0496123_0001335 3300048926 Bacteria 34852
249 Ga0496123_0006189 3300048926 Bacteria 11697
250 Ga0496123_0008994 3300048926 Bacteria 9064
251 Ga0496123_0046573 3300048926 Bacteria 2939
252 Ga0496124_0000026 3300048927 Bacteria 385387
253 Ga0496124_0000058 3300048927 Bacteria 242191
254 Ga0496124_0000164 3300048927 Bacteria 134754
255 Ga0496124_0000914 3300048927 Bacteria 47689
256 Ga0496124_0004091 3300048927 Bacteria 17252
257 Ga0496124_0007304 3300048927 Bacteria 11785
258 Ga0496124_0029485 3300048927 Bacteria 4887
259 Ga0496124_0053003 3300048927 Bacteria 3442
260 Ga0496125_0000081 3300048928 Bacteria 228069
261 Ga0496125_0000226 3300048928 Bacteria 115358
262 Ga0496125_0005982 3300048928 Bacteria 13315
263 Ga0496125_0048279 3300048928 Bacteria 3551
264 Ga0496125_0062013 3300048928 Bacteria 2993
265 Ga0496125_0080021 3300048928 Bacteria 2502
266 Ga0496126_0000632 3300048929 Bacteria 65657
267 Ga0496126_0003222 3300048929 Bacteria 20878
268 Ga0496126_0026918 3300048929 Bacteria 5504
269 Ga0496126_0031834 3300048929 Bacteria 4976
270 Ga0496126_0032007 3300048929 Bacteria 4960
271 Ga0496126_0034503 3300048929 Bacteria 4751
272 Ga0496126_0147196 3300048929 Bacteria 2021
273 Ga0496126_0172198 3300048929 Bacteria 1843
274 Ga0496126_0281850 3300048929 Bacteria 1376
275 Ga0495678_000486 3300049459 Bacteria 39405
276 Ga0495682_0000017 3300049460 Bacteria 233333
277 nmdc:mga0k408_9365_c1 3300050493 Bacteria 5276
278 Ga0500621_000004 3300053126 Bacteria 485792
279 2538427658 2537561728 Bacteria 5149301
280 2547697469 2547132181 Bacteria 4945084
281 2555258422 2554235234 Bacteria 5762085
282 2562466123 2561511199 Bacteria 5155034
283 2585826054 2585427591 Bacteria 5482980
284 2585831838 2585427592 Bacteria 5370892
285 2599409858 2599185169 Bacteria 5441380
286 2601523054 2600255254 Bacteria 5281859
287 2601528213 2600255255 Bacteria 5282785
288 2601531489 2600255256 Bacteria 5597742
289 2601536861 2600255257 Bacteria 5597196
290 2601615044 2600255280 Bacteria 5292309
291 2601620027 2600255281 Bacteria 5288753
292 2601643512 2600255287 Bacteria 5210468
293 2601648433 2600255288 Bacteria 5282738
294 2601653098 2600255289 Bacteria 5281907
295 2601658780 2600255290 Bacteria 5282218
296 2601663335 2600255291 Bacteria 5217298
297 2601696782 2600255298 Bacteria 5215185
298 2601700968 2600255299 Bacteria 5218662
299 2601705753 2600255300 Bacteria 5287774
300 2601711338 2600255301 Bacteria 5280532
301 2601716356 2600255302 Bacteria 5288235
302 2601721807 2600255303 Bacteria 5219315
303 2601726762 2600255304 Bacteria 5283973
304 2601731302 2600255305 Bacteria 5282329
305 2601736314 2600255306 Bacteria 5281613
306 2601740703 2600255307 Bacteria 5439064
307 2601751638 2600255309 Bacteria 5431045
308 2601755207 2600255310 Bacteria 5600903
309 2601760574 2600255311 Bacteria 5598766
310 2602018501 2600255392 Bacteria 5437392
311 2603639385 2602042046 Bacteria 5483348
312 2603643960 2602042047 Bacteria 4697674
313 2603660719 2602042052 Bacteria 5215873
314 2603665991 2602042053 Bacteria 5214361
315 2603700858 2602042066 Bacteria 4423871
316 2603704455 2602042067 Bacteria 4863713
317 2603838697 2602042103 Bacteria 5284714
318 2603844044 2602042104 Bacteria 5281639
319 2603848853 2602042105 Bacteria 5282303
320 2603853924 2602042106 Bacteria 5282744
321 2603865244 2602042109 Bacteria 5152801
322 2603871978 2602042110 Bacteria 5283285
323 2603876804 2602042111 Bacteria 5212080
324 2606049160 2603880178 Bacteria 5283018
325 2606070425 2603880184 Bacteria 5217896
326 2606146843 2603880202 Bacteria 5284684
327 2606176567 2603880211 Bacteria 5284226
328 2609912926 2609459761 Bacteria 5513740
329 2637223597 2636415599 Bacteria 5718434
330 2671104255 2667528172 Bacteria 5170840
331 2671109614 2667528173 Bacteria 5375747
332 2671586341 2671180115 Bacteria 5353919
333 2676408228 2675903046 Bacteria 5451247
334 2681998740 2681812866 Bacteria 4552357
335 2682007812 2681812869 Bacteria 5014465
336 2707098104 2706794495 Bacteria 4536932
337 2712472525 2711768156 Bacteria 4471618
338 2753857375 2751185917 Bacteria 4551186
339 2765590448 2765235842 Bacteria 4799256
340 2772437300 2772190666 Bacteria 5117644
341 2775539999 2775506706 Bacteria 4873073
342 2777019914 2775507074 Bacteria 5532402
343 2791925569 2791354903 Bacteria 4937680
344 2792313534 2791355010 Bacteria 4864581
345 2793404292 2791355275 Bacteria 4429597
346 2813730417 2811995292 Bacteria 5303342
347 2814698025 2814123068 Bacteria 5687681
348 2821120296 2821118458 Bacteria 4714306
349 2823376109 2823373977 Bacteria 4779415
350 2844428803 2844425489 Bacteria 4854065
351 2846541275 2846540461 Bacteria 5471451
352 2854605644 2854601825 Bacteria 4797592
353 2855199120 2855195626 Bacteria 4927512
354 2858467200 2858466076 Bacteria 4722413
355 2869552557 2869551831 Bacteria 5474685
356 2871273039 2871272651 Bacteria 5042015
357 2871283096 2871282230 Bacteria 4917173
358 2884087421 2884086401 Bacteria 5005459
359 2888367350 2888366609 Bacteria 5155009
360 2888374957 2888373701 Bacteria 5098052
361 2891672549 2891670763 Bacteria 4967099
362 2900053439 2900051742 Bacteria 4985156
363 2904478036 2904474040 Bacteria 5504324
364 2904506919 2904504865 Bacteria 5152820
365 2904516881 2904513164 Bacteria 5476410
366 2919110278 2919108558 Bacteria 5897419
367 2919154000 2919150387 Bacteria 5500879
368 2919497025 2919493220 Bacteria 4598500
369 2919546366 2919543075 Bacteria 4728703
370 2923529928 2923525760 Bacteria 4472324
371 2923636344 2923634449 Bacteria 4753480
372 2927147537 2927143783 Bacteria 5504251
373 2927837173 2927833300 Bacteria 4923934
374 2932406686 2932406140 Bacteria 5134491
375 2935629736 2935625433 Bacteria 5042964
376 2937543761 2937539931 Bacteria 4639830
377 2937970654 2937967321 Bacteria 5094075
378 2939571110 2939568625 Bacteria 4542555
379 2939577137 2939573065 Bacteria 4926053
380 2939577892 2939577877 Bacteria 5132791
381 2939610165 2939607340 Bacteria 4719256
382 2939622442 2939617950 Bacteria 4820956
383 2939645213 2939642701 Bacteria 4475280
384 2945876293 2945874760 Bacteria 5527237
385 2969080632 2969079654 Bacteria 5439582
386 2971822006 2971820967 Bacteria 5823634
387 2974315342 2974310843 Bacteria 4947816
388 2984563073 2984559226 Bacteria 5683096
389 2984601131 2984595703 Bacteria 5682994
390 3000377898 3000376612 Bacteria 4705565
391 8004597748 8004592986 Bacteria 5122074
392 8015397525 8015394850 Bacteria 5064660
393 8018224314 8018221730 Bacteria 4616064
394 8018405972 8018405270 Bacteria 4978981
395 8019509292 8019504834 Bacteria 4819156
396 8054847835 8054844752 Bacteria 4450330
397 8054853451 8054849141 Bacteria 5232694
398 8055088764 8055087960 Bacteria 4784273
399 8055097111 8055092621 Bacteria 4873875
400 8055101085 8055097453 Bacteria 4865496
401 8055694985 8055693939 Bacteria 4772047
402 8057305009 8057304971 Bacteria 4649742
403 Ga0439452_000415
404 JGI25162J39368_1000029
405 JGI25163J39215_1000037
406 JGI25164J39214_1000008
407 JGI25152J39213_1000406
408 rootH2_10044059
409 Ga0055538_1000014
410 Ga0055539_1000020
411 Ga0055533_1000027
412 Ga0055525_1000032
413 Ga0055541_1000014
414 Ga0058692_1003339
415 Ga0058692_1006895
416 Ga0058692_1017083
417 Ga0058692_1017085
418 Ga0065704_10000379
419 Ga0065704_10000930
420 Ga0065704_10001263
421 Ga0065704_10001839
422 Ga0065704_10074186
423 Ga0070659_100039473
424 Ga0070665_100000033
425 Ga0068857_100000173
426 Ga0068851_10037926
427 Ga0075364_10006536
428 Ga0079104_1000039
429 Ga0079104_1000074
430 Ga0079104_1000704
431 Ga0079104_1000856
432 Ga0079104_1001206
433 Ga0079104_1002172
434 Ga0079104_1004030
435 Ga0079104_1006022
436 Ga0079104_1027663
437 Ga0105251_10000129
438 Ga0105251_10000774
439 Ga0105251_10002541
440 Ga0105251_10002858
441 Ga0105251_10003623
442 Ga0105251_10003630
443 Ga0105251_10005608
444 Ga0105244_10000023
445 Ga0105244_10000225
446 Ga0105244_10000257
447 Ga0105244_10000790
448 Ga0105244_10001773
449 Ga0105244_10004037
450 Ga0105244_10006170
451 Ga0105244_10015376
452 Ga0105244_10053848
453 Ga0105250_10000027
454 Ga0105250_10000042
455 Ga0105250_10000086
456 Ga0105250_10002787
457 Ga0105250_10010090
458 Ga0105250_10019486
459 Ga0105250_10019810
460 Ga0105240_10217283
461 Ga0105243_10000844
462 Ga0105243_10030567
463 Ga0105241_10000008
464 Ga0157373_10012535
465 Ga0157373_10073717
466 Ga0157371_10000067
467 Ga0157371_10000778
468 Ga0157371_10010134
469 Ga0157371_10035567
470 Ga0157371_10070604
471 Ga0157370_10001927
472 Ga0157370_10009422
473 Ga0157369_10000420
474 Ga0157372_10004203
475 Ga0157372_10011763
476 Ga0157372_10028806
477 Ga0182006_1000013
478 Ga0183366_1002
479 Ga0183370_1002
480 Ga0183369_1002
481 Ga0183368_1005
482 Ga0213876_10000113
483 Ga0209760_100256
484 Ga0209784_100030
485 Ga0209566_100034
486 Ga0209674_100052
487 Ga0209563_100054
488 Ga0207427_100035
489 Ga0209437_100068
490 Ga0209677_100032
491 Ga0209129_1000221
492 Ga0209233_1009195
493 Ga0207696_1000008
494 Ga0207696_1000012
495 Ga0207696_1000024
496 Ga0207696_1000027
497 Ga0207696_1000173
498 Ga0207696_1000798
499 Ga0207696_1002472
500 Ga0207696_1007427
501 Ga0207655_1000020
502 Ga0207655_1000044
503 Ga0207655_1000054
504 Ga0207655_1000056
505 Ga0207655_1000088
506 Ga0207655_1000103
507 Ga0207655_1000198
508 Ga0207655_1000705
509 Ga0207655_1002505
510 Ga0207713_1000025
511 Ga0207713_1000033
512 Ga0207713_1000082
513 Ga0207713_1000264
514 Ga0207713_1001835
515 Ga0207713_1004514
516 Ga0207713_1018423
517 Ga0207654_10000009
518 Ga0207690_10028602
519 Ga0207709_10002325
520 Ga0207709_10023909
521 Ga0207674_10000800
522 Ga0209281_1000025
523 Ga0209281_1000048
524 Ga0209281_1000054
525 Ga0209281_1000056
526 Ga0209281_1000066
527 Ga0209281_1000133
528 Ga0209281_1000541
529 Ga0209281_1000738
530 Ga0209281_1001131
531 Ga0209281_1001235
532 Ga0209371_1000013
533 Ga0209371_1000026
534 Ga0209371_1000130
535 Ga0209371_1000275
536 Ga0209371_1000851
537 Ga0209371_1002451
538 Ga0209371_1003054
539 Ga0209371_1003436
540 Ga0209371_1007089
541 Ga0209371_1007595
542 Ga0268266_10000196
543 Ga0268256_1000003
544 Ga0268256_1000014
545 Ga0268256_1000017
546 Ga0268256_1000519
547 Ga0268256_1000767
548 Ga0268256_1001243
549 Ga0268256_1001799
550 Ga0268256_1007601
551 Ga0268256_1007833
552 Ga0268256_1010879
553 Ga0436365_0586130
554 Ga0439438_000042
555 Ga0439438_002546
556 Ga0439438_003281
557 Ga0439438_005338
558 Ga0439447_004046
559 Ga0439432_003684
560 Ga0439432_008806
561 Ga0439452_000013
562 Ga0439452_000357
563 Ga0439452_001261
564 Ga0450900_001158
565 Ga0450902_003788
566 Ga0439464_0004858
567 Ga0450893_0002010
568 Ga0466981_0000001
569 Ga0495591_000102
570 Ga0495591_004423
571 Ga0495638_0010931
572 Ga0495650_0000008
573 Ga0495650_0000059
574 Ga0495650_0000120
575 Ga0495584_0040509
576 Ga0495607_0049780
577 Ga0495606_0001700
578 Ga0495637_0045098
579 Ga0495648_0004464
580 Ga0495654_0000073
581 Ga0495654_0008927
582 Ga0495654_0014975
583 Ga0495654_0015954
584 Ga0495597_0001585
585 Ga0495625_0001852
586 Ga0495588_0011764
587 Ga0495671_0004415
588 Ga0495649_0002530
589 Ga0495649_0005925
590 Ga0495589_0005571
591 Ga0495660_0000019
592 Ga0495660_0000063
593 Ga0495672_0000003
594 Ga0495672_0000551
595 Ga0495679_000101
596 Ga0495679_013805
597 Ga0495673_0000011
598 Ga0495673_0000329
599 Ga0496101_0089578
600 Ga0496104_0004225
601 Ga0496104_0004586
602 Ga0496105_0024683
603 Ga0496116_0000096
604 Ga0496116_0002650
605 Ga0496116_0045279
606 Ga0496117_0000168
607 Ga0496117_0003066
608 Ga0496117_0003968
609 Ga0496117_0017102
610 Ga0496117_0030076
611 Ga0496117_0032682
612 Ga0496118_0006378
613 Ga0496118_0008828
614 Ga0496118_0010755
615 Ga0496118_0013886
616 Ga0496118_0017563
617 Ga0496118_0177717
618 Ga0496119_0001367
619 Ga0496119_0002824
620 Ga0496119_0004145
621 Ga0496119_0008687
622 Ga0496119_0009385
623 Ga0496119_0010432
624 Ga0496120_0001219
625 Ga0496120_0001483
626 Ga0496120_0001781
627 Ga0496120_0003161
628 Ga0496120_0004375
629 Ga0496120_0010515
630 Ga0496120_0016250
631 Ga0496120_0017770
632 Ga0496121_0002429
633 Ga0496121_0004042
634 Ga0496121_0014740
635 Ga0496121_0030375
636 Ga0496121_0033700
637 Ga0496121_0059239
638 Ga0496122_0000016
639 Ga0496122_0000213
640 Ga0496122_0000339
641 Ga0496122_0001139
642 Ga0496122_0005835
643 Ga0496122_0034275
644 Ga0496122_0059611
645 Ga0496122_0069096
646 Ga0496122_0103829
647 Ga0496123_0000177
648 Ga0496123_0000444
649 Ga0496123_0001212
650 Ga0496123_0001335
651 Ga0496123_0006189
652 Ga0496123_0008994
653 Ga0496123_0046573
654 Ga0496124_0000026
655 Ga0496124_0000058
656 Ga0496124_0000164
657 Ga0496124_0000914
658 Ga0496124_0004091
659 Ga0496124_0007304
660 Ga0496124_0029485
661 Ga0496124_0053003
662 Ga0496125_0000081
663 Ga0496125_0000226
664 Ga0496125_0005982
665 Ga0496125_0048279
666 Ga0496125_0062013
667 Ga0496125_0080021
668 Ga0496126_0000632
669 Ga0496126_0003222
670 Ga0496126_0026918
671 Ga0496126_0031834
672 Ga0496126_0032007
673 Ga0496126_0034503
674 Ga0496126_0147196
675 Ga0496126_0172198
676 Ga0496126_0281850
677 Ga0495678_000486
678 Ga0495682_0000017
679 nmdc:mga0k408_9365_c1
680 Ga0500621_000004
681 2538427658
682 2547697469
683 2555258422
684 2562466123
685 2585826054
686 2585831838
687 2599409858
688 2601523054
689 2601528213
690 2601531489
691 2601536861
692 2601615044
693 2601620027
694 2601643512
695 2601648433
696 2601653098
697 2601658780
698 2601663335
699 2601696782
700 2601700968
701 2601705753
702 2601711338
703 2601716356
704 2601721807
705 2601726762
706 2601731302
707 2601736314
708 2601740703
709 2601751638
710 2601755207
711 2601760574
712 2602018501
713 2603639385
714 2603643960
715 2603660719
716 2603665991
717 2603700858
718 2603704455
719 2603838697
720 2603844044
721 2603848853
722 2603853924
723 2603865244
724 2603871978
725 2603876804
726 2606049160
727 2606070425
728 2606146843
729 2606176567
730 2609912926
731 2637223597
732 2671104255
733 2671109614
734 2671586341
735 2676408228
736 2681998740
737 2682007812
738 2707098104
739 2712472525
740 2753857375
741 2765590448
742 2772437300
743 2775539999
744 2777019914
745 2791925569
746 2792313534
747 2793404292
748 2813730417
749 2814698025
750 2821120296
751 2823376109
752 2844428803
753 2846541275
754 2854605644
755 2855199120
756 2858467200
757 2869552557
758 2871273039
759 2871283096
760 2884087421
761 2888367350
762 2888374957
763 2891672549
764 2900053439
765 2904478036
766 2904506919
767 2904516881
768 2919110278
769 2919154000
770 2919497025
771 2919546366
772 2923529928
773 2923636344
774 2927147537
775 2927837173
776 2932406686
777 2935629736
778 2937543761
779 2937970654
780 2939571110
781 2939577137
782 2939577892
783 2939610165
784 2939622442
785 2939645213
786 2945876293
787 2969080632
788 2971822006
789 2974315342
790 2984563073
791 2984601131
792 3000377898
793 8004597748
794 8015397525
795 8018224314
796 8018405972
797 8019509292
798 8054847835
799 8054853451
800 8055088764
801 8055097111
802 8055101085
803 8055694985
804 8057305009

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01938

TRAM

TRAM domain

61

118

0.96

PF00398

RrnaAD

Ribosomal RNA adenine dimethylase

312

400

0.92

PF13649

Methyltransf_25

Methyltransferase domain

341

430

0.88

PF13847

Methyltransf_31

Methyltransferase domain

336

463

0.87

PF03602

Cons_hypoth95

Conserved hypothetical protein 95

324

448

0.86

PF05958

tRNA_U5-meth_tr

tRNA (Uracil-5-)-methyltransferase

302

483

0.86

PF01135

PCMT

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

312

429

0.84

PF08241

Methyltransf_11

Methyltransferase domain

342

414

0.84

PF05175

MTS

Methyltransferase small domain

324

436

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1uwv-assembly1.cif.gz_A crystal structure of ruma, the iron-sulfur cluster containing e. coli 23s ribosomal rna 5-methyluridine methyltransferase 0.9658 15 446
1uwv-assembly1.cif.gz_A crystal structure of ruma, the iron-sulfur cluster containing e. coli 23s ribosomal rna 5-methyluridine methyltransferase 0.9635 15 446
5zq8-assembly1.cif.gz_B crystal structure of sprlmcd with u747 stemloop rna 0.8975 14 446
5xj1-assembly1.cif.gz_A crystal structure of sprlmcd 0.8899 14 448
1yez-assembly1.cif.gz_A solution structure of the conserved protein from the gene locus mm1357 of methanosarcina mazei. northeast structural genomics target mar30. 0.8823 14 66
ID Description Score Start End Superfamily
2bh2B01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9815 17 87 2.40.50.140
1uwvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9684 280 446 3.40.50.150
af_Q2FWZ3_2_80_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9671 14 87 2.40.50.140
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9656 299 360 3.40.50.150
2bh2B01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9551 17 87 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A2X1KCD0-F1-model_v4 23s rRNA (Uracil-5-)-methyltransferase (EC 2.1.1.-, EC 2.1.1.190) 0.9832 262 446 GO:0070041
GO:0070475
AF-A0A376MH62-F1-model_v4 23s rRNA (Uracil-5-)-methyltransferase (EC 2.1.1.-, EC 2.1.1.190) 0.9818 161 446 GO:0070041
GO:0070475
AF-A0A376MH62-F1-model_v4 23s rRNA (Uracil-5-)-methyltransferase (EC 2.1.1.-, EC 2.1.1.190) 0.9718 161 446 GO:0070041
GO:0070475
AF-A0A1W9LDM3-F1-model_v4 23S rRNA (Uracil-5-)-methyltransferase RumA 0.9703 15 100 GO:0006396
GO:0008173
GO:0032259
AF-A0A3S5DFC0-F1-model_v4 23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD (EC 2.1.1.190) 0.9682 248 448 GO:0070041
GO:0070475

Map