F443429

General Info

Members Datasets Scaffolds Average Seq Length
435 408 140 762

Family's Representative Sequence

Representative Sequence 3300053107|Ga0500560_001888|Ga0500560_001888_738_3302
Length 822
Sequence MFASAGTDQQNFHGQYPCNLACNLVAGALRAGGRKVKEKAPQMSVFLVVTPQSDIMFAAPDVTSENLMTADNARLATLIASEINARADQVKAAVALLDEGATVPFIARYRKEATGGLDDTQLRTLAERLVYLREFNARRASIVETITGQGKMTDALMVKIMQTATKAELEDIYLPYKPKRRTRAEIARERGLGPLAEAIWANRAADPAKLGEAYVQGEVADVKAALEGARDIVAETMTENADLLGRLRDYMRQNAIFRAKVVDGKQAAGEKFSDYFDHFERWATVPGHRALAMLRGWNEEILTLPSPVKPAQRSVAAAFDIRNAGPADQWLMDVAGWTWRMRELRERSEEEAINVFARNLKDLLLAAPAGSRSTMGLDPGIRTGVKVAVVDGTGKLLDTSTVYPFQPRNDVRGAQAELALLIRKHNVELIAIGNGTGSRETEKLVADLLAQMPASASGTKPTKVIVSEAGASVYSASERAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQGRLNRSLDAVVEDAVNAVGVDLNTASSPLLARVSGLGTSIADAIVAHRDQTGPFASRKELLKVPRLGQRTFEQCAGFLRIPNGKEPLDSSSVHPEAYGVAKKIVAACGRDLRTLMGDSATLKALDPKRFIDEQFGLPTVKDIIAELEKPGRDPRPSFKTATFADGVDEITDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVKRKRIALTMRKDGGEAAPQPMREKGNAGAMRHANAKPQGHNEGSQSGGALAAALAEAMKRR

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
3 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
4 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
5 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
6 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
7 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
8 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
9 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
10 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
11 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
12 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
13 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
14 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
15 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
16 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
17 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
18 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
19 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
20 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
21 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
22 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
23 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
24 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
25 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
26 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
27 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
28 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
29 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
30 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
31 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
32 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
33 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
34 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
35 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
36 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
37 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
38 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
39 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
40 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
41 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
42 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
43 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
44 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
45 2643221558 Rhizobium sp. Root149 Isolate Unclassified
46 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
47 2643221582 Rhizobium sp. Root651 Isolate Unclassified
48 2643221607 Rhizobium sp. Root73 Isolate Unclassified
49 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
50 2643221629 Devosia sp. Root105 Isolate Unclassified
51 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
52 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
53 2643221651 Afipia sp. Root123D2 Isolate Unclassified
54 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
55 2643221662 Devosia sp. Root413D1 Isolate Unclassified
56 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
57 2643221688 Rhizobium sp. Root482 Isolate Unclassified
58 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
59 2643221693 Rhizobium sp. Root491 Isolate Unclassified
60 2643221719 Rhizobium sp. Root274 Isolate Unclassified
61 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
62 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
63 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
64 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
65 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
66 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
67 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
68 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
69 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
70 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
71 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
72 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
73 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
74 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
75 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
76 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
77 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
78 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
79 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
80 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
81 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
82 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
83 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
84 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
85 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
86 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
87 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
88 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
89 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
90 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
91 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
92 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
93 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
94 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
95 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
96 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
97 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
98 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
99 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
100 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
101 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
102 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
103 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
104 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
105 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
106 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
107 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
108 2909042592 Labrys sp. LIt4 Isolate Nodule
109 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
110 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
111 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
112 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
113 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
114 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
115 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
116 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
117 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
118 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
119 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
120 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
121 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
122 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
123 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
124 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
125 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
126 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
127 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
128 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
129 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
130 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
131 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
132 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
133 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
134 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
135 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
136 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
137 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
138 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
139 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
140 2924179722 Sinorhizobium meliloti USDA1280 Isolate Nodule
141 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
142 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
143 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
144 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
145 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
146 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
147 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
148 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
149 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
150 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
151 2932401849 Devosia sp. 2618 Isolate Rhizosphere
152 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
153 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
154 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
155 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
156 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
157 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
158 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
159 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
160 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
161 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
162 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
163 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
164 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
165 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
166 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
167 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
168 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
169 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
170 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
171 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
172 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
173 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
174 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
175 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
176 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
177 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
178 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
179 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
180 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
181 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
182 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
183 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
184 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
185 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
186 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
187 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
188 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
189 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
190 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
191 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
192 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
193 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
194 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
195 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
196 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
197 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
198 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
199 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
200 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
201 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
202 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
203 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
204 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
205 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
206 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
207 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
208 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
209 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
210 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
211 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
212 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
213 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
214 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
215 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
216 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
217 2964705432 Sinorhizobium meliloti USDA1614 Isolate Nodule
218 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
219 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
220 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
221 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
222 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
223 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
224 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
225 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
226 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
227 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
228 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
229 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
230 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
231 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
232 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
233 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
234 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
235 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
236 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
237 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
238 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
239 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
240 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
241 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
242 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
243 2970082768 Sinorhizobium meliloti USDA1803 Isolate Nodule
244 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
245 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
246 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
247 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
248 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
249 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
250 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
251 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
252 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
253 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
254 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
255 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
256 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
257 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
258 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
259 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
260 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
261 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
262 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
263 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
264 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
265 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
266 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
267 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
268 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
269 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
270 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
271 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
272 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
273 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
274 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
275 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
276 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
277 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
278 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
279 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
280 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
281 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
282 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
283 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
284 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
285 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
286 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
287 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
288 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
289 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
290 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
291 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
292 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
293 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
294 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
295 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
296 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
297 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
298 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
299 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
300 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
301 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
302 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
303 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
304 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
305 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
306 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
307 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
308 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
309 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
310 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
311 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
312 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
313 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
314 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
315 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
316 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
317 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
318 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
319 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
320 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
321 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
322 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
323 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
324 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
325 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
326 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
327 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
328 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
329 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
330 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
331 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
332 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
333 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
334 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
335 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
336 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
337 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
338 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
339 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
340 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
341 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
342 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
343 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
344 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
345 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
346 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
347 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
348 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
349 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
350 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
351 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
352 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
353 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
354 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
355 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
356 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
357 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
358 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
359 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
360 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
361 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
362 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
363 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
364 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
365 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
366 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
367 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
368 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
369 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
370 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
371 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
372 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
373 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
374 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
375 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
376 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
377 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
378 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
379 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
380 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
381 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
382 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
383 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
384 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
385 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
386 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
387 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
388 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
389 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
390 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
391 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
392 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
393 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
394 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
395 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
396 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
397 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
398 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
399 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
400 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
401 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
402 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
403 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
404 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
405 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
406 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
407 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere
408 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 32.18
Metatranscriptomes 0
Isolates 67.82

Biome Distribution

Category Percentage (%)
Aerial Root 0.92
Bulb 0
Endosphere 8.74
Nodule 46.9
Rhizoplane 1.38
Rhizosphere 23.91
Stem 0
Stem Tuber 0
Unclassified 18.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000345 3300001979 Bacteria 19777
2 JGI25155J39150_1000006 3300002704 Bacteria 244109
3 JGI25156J39149_1000019 3300002705 Bacteria 160845
4 JGI25162J39368_1001504 3300002737 Bacteria 12148
5 JGI25162J39368_1001711 3300002737 Bacteria 10657
6 JGI25154J39366_1000055 3300002738 Bacteria 115597
7 JGI25154J39366_1001810 3300002738 Bacteria 6690
8 JGI25157J39369_1000024 3300002741 Bacteria 160844
9 JGI25159J45721_1000671 3300002987 Bacteria 15104
10 JGI25165J46597_1001097 3300003214 Bacteria 17272
11 JGI25160J50197_1000053 3300003354 Bacteria 127632
12 JGI25161J50226_1000039 3300003374 Bacteria 127632
13 Ga0055536_1001521 3300003781 Bacteria 13910
14 Ga0055540_1005521 3300003792 Bacteria 5288
15 Ga0055531_10004130 3300003794 Bacteria 8973
16 Ga0058692_1003301 3300003856 Bacteria 5029
17 Ga0055543_1000015 3300004625 Bacteria 177197
18 Ga0065165_1000959 3300005262 Bacteria 36277
19 Ga0065165_1002407 3300005262 Bacteria 15965
20 Ga0070681_10001859 3300005458 Bacteria 19060
21 Ga0070681_10029573 3300005458 Bacteria 5501
22 Ga0070707_100000027 3300005468 Bacteria 124211
23 Ga0070699_100003686 3300005518 Bacteria 13551
24 Ga0070665_100019847 3300005548 Bacteria 6749
25 Ga0068856_100004402 3300005614 Bacteria 14037
26 Ga0070717_10040042 3300006028 Bacteria 3815
27 Ga0075368_10006865 3300006042 Bacteria 4001
28 Ga0075364_10026669 3300006051 Bacteria 3687
29 Ga0075369_10011005 3300006186 Bacteria 3549
30 Ga0075433_10070683 3300006852 Bacteria 3068
31 Ga0099826_10000253 3300006948 Bacteria 23616
32 Ga0105240_10000027 3300009093 Bacteria 348486
33 Ga0105237_10000508 3300009545 Bacteria 54970
34 Ga0105239_10003005 3300010375 Bacteria 21026
35 Ga0157326_1000602 3300012513 Bacteria 4249
36 Ga0157371_10000058 3300013102 Bacteria 171756
37 Ga0157370_10000048 3300013104 Bacteria 124683
38 Ga0157370_10003318 3300013104 Bacteria 18959
39 Ga0157369_10027193 3300013105 Bacteria 6343
40 Ga0209435_100011 3300025206 Bacteria 413027
41 Ga0209672_104106 3300025228 Bacteria 2792
42 Ga0209437_100036 3300025233 Bacteria 469153
43 Ga0209646_1000024 3300025246 Bacteria 413027
44 Ga0209026_1000030 3300025250 Bacteria 329811
45 Ga0209677_100177 3300025253 Bacteria 54158
46 Ga0209759_1000011 3300025256 Bacteria 413027
47 Ga0209233_1000056 3300025261 Bacteria 438104
48 Ga0209233_1000298 3300025261 Bacteria 61008
49 Ga0209130_1000038 3300025284 Bacteria 264226
50 Ga0209676_1008232 3300025292 Bacteria 4693
51 Ga0209025_1000149 3300025294 Bacteria 173393
52 Ga0209025_1002181 3300025294 Bacteria 21729
53 Ga0209758_1000191 3300025297 Bacteria 136984
54 Ga0209050_1007893 3300025298 Bacteria 5837
55 Ga0207426_1000081 3300025302 Bacteria 304502
56 Ga0209051_1004018 3300025303 Bacteria 9310
57 Ga0209257_1003310 3300025304 Bacteria 14013
58 Ga0207705_10034209 3300025909 Bacteria 3633
59 Ga0207695_10000024 3300025913 Bacteria 632311
60 Ga0207671_10000176 3300025914 Bacteria 98289
61 Ga0207646_10000035 3300025922 Bacteria 209056
62 Ga0207667_10000739 3300025949 Bacteria 42543
63 Ga0207668_10005704 3300025972 Bacteria 7334
64 Ga0207702_10009183 3300026078 Bacteria 8313
65 Ga0209371_1000009 3300027312 Bacteria 963030
66 Ga0209371_1001137 3300027312 Bacteria 19526
67 Ga0209371_1002499 3300027312 Bacteria 10200
68 Ga0209282_1000269 3300027666 Bacteria 25931
69 Ga0268266_10017100 3300028379 Bacteria 6193
70 Ga0265334_10000065 3300028573 Bacteria 78374
71 Ga0307515_10017340 3300028794 Bacteria 13124
72 Ga0268256_1000010 3300030500 Bacteria 963034
73 Ga0268256_1005347 3300030500 Bacteria 5064
74 Ga0307408_100027508 3300031548 Bacteria 3920
75 Ga0307412_10049214 3300031911 Bacteria 2776
76 Ga0307411_10059123 3300032005 Bacteria 2540
77 Ga0373935_0034403 3300035692 Bacteria 3158
78 Ga0373927_0000554 3300035695 Bacteria 28491
79 Ga0395905_0007575 3300037471 Bacteria 10787
80 Ga0395905_0032768 3300037471 Bacteria 4885
81 Ga0395905_0123739 3300037471 Bacteria 2432
82 Ga0400483_032942 3300039062 Bacteria 23058
83 Ga0400483_046831 3300039062 Bacteria 362835
84 Ga0451845_0177808 3300041501 Bacteria 3177
85 Ga0450906_002084 3300042145 Bacteria 4375
86 Ga0466970_0014852 3300044765 Bacteria 4002
87 Ga0451576_0013144 3300045051 Bacteria 9266
88 Ga0495638_0007599 3300046460 Bacteria 7754
89 Ga0495605_0001537 3300046474 Bacteria 14985
90 Ga0495654_0000436 3300046530 Bacteria 35437
91 Ga0495671_0021323 3300046692 Bacteria 3406
92 Ga0495681_0001172 3300047470 Bacteria 19925
93 Ga0496117_0000002 3300048920 Bacteria 2483758
94 Ga0496117_0002297 3300048920 Bacteria 24621
95 Ga0496118_0000233 3300048921 Bacteria 97731
96 Ga0496119_0031379 3300048922 Bacteria 3565
97 Ga0496120_0000021 3300048923 Bacteria 250966
98 Ga0496120_0010303 3300048923 Bacteria 6535
99 Ga0496120_0041984 3300048923 Bacteria 2674
100 Ga0496121_0011533 3300048924 Bacteria 9791
101 Ga0496121_0070436 3300048924 Bacteria 2817
102 Ga0496122_0000001 3300048925 Bacteria 1827766
103 Ga0496122_0000009 3300048925 Bacteria 584024
104 Ga0496122_0000492 3300048925 Bacteria 82125
105 Ga0496122_0018789 3300048925 Bacteria 6357
106 Ga0496123_0000001 3300048926 Bacteria 1831497
107 Ga0496123_0000020 3300048926 Bacteria 388748
108 Ga0496123_0000460 3300048926 Bacteria 71476
109 Ga0496123_0038566 3300048926 Bacteria 3355
110 Ga0496124_0008657 3300048927 Bacteria 10594
111 Ga0496125_0006717 3300048928 Bacteria 12370
112 Ga0496125_0009761 3300048928 Bacteria 9795
113 Ga0501031_0002715 3300049568 Bacteria 11265
114 Ga0501032_0000104 3300049569 Bacteria 71651
115 Ga0501033_0000145 3300049570 Bacteria 68524
116 Ga0501033_0000192 3300049570 Bacteria 58682
117 Ga0501034_0000529 3300049571 Bacteria 61012
118 Ga0501036_0000087 3300049572 Bacteria 58173
119 Ga0501037_0000029 3300049573 Bacteria 139680
120 Ga0501038_0000120 3300049574 Bacteria 66925
121 Ga0501039_0000043 3300049575 Bacteria 109462
122 Ga0501043_0000160 3300049579 Bacteria 61140
123 Ga0501046_0000228 3300049580 Bacteria 58342
124 Ga0501046_0010599 3300049580 Bacteria 7910
125 Ga0501047_0042182 3300049581 Bacteria 4410
126 Ga0501070_0052870 3300049586 Bacteria 3371
127 Ga0501083_0032105 3300049744 Bacteria 3602
128 Ga0501035_0000057 3300049822 Bacteria 135297
129 Ga0501035_0001613 3300049822 Bacteria 22812
130 nmdc:mga00v17_4794_c1 3300050491 Bacteria 7081
131 nmdc:mga0qj67_50377_c1 3300050509 Bacteria 3293
132 nmdc:mga06r32_23046_c1 3300050510 Bacteria 5759
133 nmdc:mga0sz30_395_c1 3300050516 Bacteria 16600
134 Ga0500560_001888 3300053107 Bacteria 3821
135 Ga0500559_0007790 3300053136 Bacteria 4731
136 Ga0500561_0000455 3300053137 Bacteria 6665
137 Ga0500590_019653 3300053148 Bacteria 3501
138 Ga0500616_0000191 3300053153 Bacteria 100381
139 Ga0500622_0001309 3300053156 Bacteria 20223
140 Ga0500634_0000034 3300053161 Bacteria 74144

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2924172951 2924173402 607
2 iso_pu_bacteria 2970095765 2970096862 608
3 3300006028 Ga0070717_10040042 Ga0070717_100400423 684
4 3300053161 Ga0500634_0000034 Ga0500634_0000034_40347_42650 691
5 3300037471 Ga0395905_0123739 Ga0395905_0123739_98_2272 703
6 3300049570 Ga0501033_0000145 Ga0501033_0000145_10688_13012 704
7 3300049822 Ga0501035_0001613 Ga0501035_0001613_20430_22754 704
8 3300006042 Ga0075368_10006865 Ga0075368_100068652 705
9 3300012513 Ga0157326_1000602 Ga0157326_10006021 707
10 3300050509 nmdc:mga0qj67_50377_c1 nmdc:mga0qj67_50377_c1_351_2657 707
11 3300050510 nmdc:mga06r32_23046_c1 nmdc:mga06r32_23046_c1_400_2706 707
12 iso_pu_bacteria 2551306087 2551703181 711
13 iso_pu_bacteria 2551306091 2551731094 713
14 iso_pu_bacteria 2970156795 2970162810 715
15 3300006852 Ga0075433_10070683 Ga0075433_100706831 717
16 3300005614 Ga0068856_100004402 Ga0068856_1000044025 720
17 3300025909 Ga0207705_10034209 Ga0207705_100342092 720
18 3300025949 Ga0207667_10000739 Ga0207667_1000073931 720
19 3300026078 Ga0207702_10009183 Ga0207702_100091835 720
20 iso_pu_bacteria 2967762386 2967764552 720
21 3300037471 Ga0395905_0032768 Ga0395905_0032768_788_3088 723
22 3300005468 Ga0070707_100000027 Ga0070707_10000002744 724
23 3300005518 Ga0070699_100003686 Ga0070699_1000036862 724
24 3300025922 Ga0207646_10000035 Ga0207646_1000003573 724
25 3300049580 Ga0501046_0000228 Ga0501046_0000228_34227_36548 725
26 3300037471 Ga0395905_0007575 Ga0395905_0007575_386_2731 726
27 3300048924 Ga0496121_0070436 Ga0496121_0070436_128_2458 728
28 3300049744 Ga0501083_0032105 Ga0501083_0032105_696_3005 729
29 3300039062 Ga0400483_032942 Ga0400483_032942_20531_22858 730
30 3300005458 Ga0070681_10029573 Ga0070681_100295732 731
31 3300039062 Ga0400483_046831 Ga0400483_046831_126761_129076 733
32 iso_pu_bacteria 2891048133 2891048168 733
33 3300005458 Ga0070681_10001859 Ga0070681_1000185912 734
34 3300025972 Ga0207668_10005704 Ga0207668_100057042 734
35 iso_pu_bacteria 2899275550 2899277601 734
36 iso_pu_bacteria 2834578030 2834578425 735
37 3300042145 Ga0450906_002084 Ga0450906_002084_1497_3863 736
38 3300006948 Ga0099826_10000253 Ga0099826_100002533 738
39 3300027666 Ga0209282_1000269 Ga0209282_10002697 738
40 3300048926 Ga0496123_0038566 Ga0496123_0038566_242_2521 738
41 iso_pu_bacteria 8057132660 8057135424 738
42 3300041501 Ga0451845_0177808 Ga0451845_0177808_189_2639 739
43 3300048923 Ga0496120_0041984 Ga0496120_0041984_65_2416 739
44 3300003856 Ga0058692_1003301 Ga0058692_10033013 740
45 3300027312 Ga0209371_1001137 Ga0209371_10011374 740
46 3300030500 Ga0268256_1005347 Ga0268256_10053472 740
47 3300045051 Ga0451576_0013144 Ga0451576_0013144_2808_5183 740
48 3300046692 Ga0495671_0021323 Ga0495671_0021323_286_2646 740
49 3300047470 Ga0495681_0001172 Ga0495681_0001172_15095_17455 740
50 3300048925 Ga0496122_0000009 Ga0496122_0000009_379269_381575 740
51 3300048926 Ga0496123_0000020 Ga0496123_0000020_183721_186027 740
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427 3300025256 Ga0209759_1000011 Ga0209759_1000011177 756
428 3300025261 Ga0209233_1000056 Ga0209233_1000056420 756
429 3300025284 Ga0209130_1000038 Ga0209130_10000384 756
430 3300025302 Ga0207426_1000081 Ga0207426_100008144 756
431 3300027312 Ga0209371_1002499 Ga0209371_10024991 756
432 3300044765 Ga0466970_0014852 Ga0466970_0014852_1049_3358 756
433 3300046474 Ga0495605_0001537 Ga0495605_0001537_497_2947 756
434 3300053148 Ga0500590_019653 Ga0500590_019653_730_3039 756
435 iso_pu_bacteria 8001845381 8001847659 756

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12836

HHH_3

Helix-hairpin-helix motif

542

606

0.99

PF17674

HHH_9

HHH domain

612

681

0.99

PF00575

S1

S1 RNA binding domain

698

771

0.97

PF09371

Tex_N

Tex-like protein N-terminal domain

73

147

0.97

PF16921

Tex_YqgF

Tex protein YqgF-like domain

372

502

0.97

PF22706

Tex_central_region

Tex central region-like

202

356

0.94

PF23459

699

769

0.93

PF14635

HHH_7

Helix-hairpin-helix motif

512

608

0.91

PF14639

YqgF

Holliday-junction resolvase-like of SPT6

379

512

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
2duy-assembly1.cif.gz_A crystal structure of competence protein comea-related protein from thermus thermophilus hb8 0.8998 478 541
8dss-assembly1.cif.gz_B x-ray crystal structure of geobacillus stearothermophilus comea 0.8965 476 543
2edu-assembly1.cif.gz_A solution structure of rsgi ruh-070, a c-terminal domain of kinesin-like protein kif22 from human cdna 0.8352 474 536
2duy-assembly1.cif.gz_A crystal structure of competence protein comea-related protein from thermus thermophilus hb8 0.825 478 541
4nni-assembly1.cif.gz_A structural basis for targeting the ribosomal protein s1 of mycobacterium tuberculosis by pyrazinamide 0.8041 635 707
ID Description Score Start End Superfamily
af_Q2FWJ5_314_440_1.10.3500.10 Mainly Alpha;Orthogonal Bundle;Tex N-terminal region-like;Tex N-terminal region-like 0.9763 311 437 1.10.3500.10
af_P46837_326_451_1.10.3500.10 Mainly Alpha;Orthogonal Bundle;Tex N-terminal region-like;Tex N-terminal region-like 0.9762 311 437 1.10.3500.10
af_Q4DZK1_366_488_1.10.3500.10 Mainly Alpha;Orthogonal Bundle;Tex N-terminal region-like;Tex N-terminal region-like 0.9686 311 436 1.10.3500.10
af_Q2FWJ5_314_440_1.10.3500.10 Mainly Alpha;Orthogonal Bundle;Tex N-terminal region-like;Tex N-terminal region-like 0.9613 311 437 1.10.3500.10
af_P46837_326_451_1.10.3500.10 Mainly Alpha;Orthogonal Bundle;Tex N-terminal region-like;Tex N-terminal region-like 0.961 311 437 1.10.3500.10
ID Description Score Start End GO Terms
AF-A0A520BAS6-F1-model_v4 RNA-binding transcriptional accessory protein 0.994 6 108 GO:0003729
GO:0003735
GO:0006412
AF-A0A3D3SSX3-F1-model_v4 deleted 0.9875 301 446
AF-A0A4Q6F9E8-F1-model_v4 deleted 0.9873 5 91
AF-A0A355QY93-F1-model_v4 deleted 0.9825 5 113
AF-A0A3D3SSX3-F1-model_v4 deleted 0.9809 301 446

Feature Viewer

pLDDT pTM Quality
80.84 0.7 High
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Predicted Structure (AlphaFold2)

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