F443602

General Info

Members Datasets Scaffolds Average Seq Length
436 184 872 272

Family's Representative Sequence

Representative Sequence 3300041405|Ga0439438_000225|Ga0439438_000225_7712_8590
Length 292
Sequence MVSMSHRNRPPPPRLSEPVRRIEAGPWAIELLPGCAYATRYVATQAGIGFAFDSQRGLHAIGSDRIRPFDAVPNGLAFVPAGCDVLSESPQGGEYLRVIRTDGMALMGDRAFNNRIDRQATALAWRMRAALLLSSVEDDWEAWALALSERATGSEAVSTTPHGSITGSRMRLLDEFIDAGLEDPLSVPAMAGLLGLSEGYFMRAFKNATGKSPHSYLIDRRVAKARALMRDSTATLTEIAYACGFNSQAHMATTFKQRLGVSPAQLRQSLGLEQIDSEAHAKADLLGMAKRN

Samples

Sample ID Description Type Environment
1 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
5 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
10 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
11 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
12 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
13 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
14 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
15 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
16 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
17 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
18 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
21 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
22 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
23 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
24 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
25 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
26 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
27 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
36 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
37 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
38 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
39 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
40 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
41 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
42 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
43 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
44 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
48 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
49 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
50 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
51 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
52 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
53 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
54 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
55 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
56 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
57 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
58 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
59 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
60 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
61 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
62 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
63 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
64 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
65 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
66 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
67 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
68 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
69 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
72 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
73 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
74 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
75 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
76 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
77 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
82 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
83 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
84 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
85 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
86 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
87 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
88 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
89 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
90 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
91 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
92 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
93 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
94 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
99 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
100 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
101 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
104 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
107 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
108 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
109 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
110 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
111 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
112 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
113 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
116 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
119 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
120 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
121 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
122 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
123 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
126 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
127 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
128 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
129 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
130 2511231010 Pseudomonas sp. GM25 Isolate Nodule
131 2511231012 Pseudomonas sp. GM33 Isolate Nodule
132 2511231015 Pseudomonas sp. GM49 Isolate Nodule
133 2511231017 Pseudomonas sp. GM55 Isolate Nodule
134 2511231020 Pseudomonas sp. GM74 Isolate Nodule
135 2511231021 Pseudomonas sp. GM78 Isolate Nodule
136 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
137 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
138 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
139 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
140 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
141 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
142 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
143 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
144 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
145 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
146 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
147 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
148 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
149 2599185317 Pseudomonas sp. NFACC06-1 Isolate Rhizoplane
150 2599185318 Pseudomonas sp. NFACC13-1 Isolate Rhizoplane
151 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
152 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
153 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
154 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
155 2599185324 Pseudomonas sp. NFACC46-3 Isolate Rhizoplane
156 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
157 2600254930 Pseudomonas sp. NFIX10 Isolate Rhizoplane
158 2600255318 Pseudomonas putida NFIX47 Isolate Rhizoplane
159 2603880185 Pseudomonas sp. NFIX46 Isolate Rhizoplane
160 2603880199 Pseudomonas sp. NFIX49 Isolate Rhizoplane
161 2643221589 Pseudomonas sp. Root68 Isolate Unclassified
162 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
163 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
164 2651869719 Genome Sequence of Pseudomonas fluorescens UM270 Isolate Rhizosphere
165 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
166 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
167 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
168 2713897149 Pseudomonas fluorescens SF4c Isolate Rhizosphere
169 2738543004 Pseudomonas sp. GV085 Isolate Unclassified
170 2738543015 Pseudomonas sp. GV041 Isolate Unclassified
171 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
172 2791355520 Pseudomonas sp. s211(2017) Isolate Unclassified
173 2808606382 Pseudomonas sp. SJZ080 Isolate Rhizosphere
174 2825651385 Pseudomonas brassicacearum L13-6-12 Isolate Rhizosphere
175 2878029506 Pseudomonas fluorescens DR397 Isolate Rhizosphere
176 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
177 2919063839 Pseudomonas pharyngis 1098 Isolate Rhizosphere
178 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
179 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
180 2931369376 Pseudomonas fluorescens DR133 Isolate Rhizosphere
181 2939636861 Pseudomonas sp. 2725 Isolate Rhizosphere
182 3007511990 Pseudomonas fluorescens G20-18 Isolate Rhizosphere
183 3007866637 Pseudomonas marvdashtae SWRI102 Isolate Rhizosphere
184 8056125926 Pseudomonas azerbaijanorientalis SWRI123 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.39
Metatranscriptomes 0
Isolates 12.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.19
Nodule 2.75
Rhizoplane 6.42
Rhizosphere 78.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439438_000225 3300041405 Bacteria 25794
2 SwRhRL2b_contig_1351428 2162886007 Bacteria 3675
3 Ga0055536_1000115 3300003781 Bacteria 69846
4 Ga0055530_10000122 3300003791 Bacteria 67358
5 Ga0055530_10006048 3300003791 Bacteria 5531
6 Ga0055530_10015209 3300003791 Bacteria 2525
7 Ga0055540_1000155 3300003792 Bacteria 67358
8 Ga0055540_1000204 3300003792 Bacteria 57435
9 Ga0055531_10005347 3300003794 Bacteria 7529
10 Ga0065714_10003714 3300005288 Bacteria 11382
11 Ga0065714_10067404 3300005288 Bacteria 5534
12 Ga0065714_10079191 3300005288 Bacteria 2505
13 Ga0065704_10070517 3300005289 Bacteria 21943
14 Ga0075364_10026811 3300006051 Bacteria 3678
15 Ga0075364_10045941 3300006051 Bacteria 2842
16 Ga0075432_10005206 3300006058 Bacteria 4427
17 Ga0075362_10015328 3300006177 Bacteria 3115
18 Ga0075362_10021086 3300006177 Bacteria 2729
19 Ga0075362_10028208 3300006177 Bacteria 2409
20 Ga0075436_100105582 3300006914 Bacteria 1964
21 Ga0075436_100120219 3300006914 Bacteria 1837
22 Ga0075436_100344063 3300006914 Bacteria 1074
23 Ga0079104_1000054 3300006946 Bacteria 168000
24 Ga0079104_1000245 3300006946 Bacteria 72407
25 Ga0099826_10018326 3300006948 Bacteria 5285
26 Ga0105251_10001281 3300009011 Bacteria 21723
27 Ga0105251_10009793 3300009011 Bacteria 5619
28 Ga0105251_10013682 3300009011 Bacteria 4527
29 Ga0105251_10052253 3300009011 Bacteria 1946
30 Ga0105251_10060714 3300009011 Bacteria 1779
31 Ga0105244_10000602 3300009036 Bacteria 32010
32 Ga0105244_10009030 3300009036 Bacteria 6168
33 Ga0105244_10040638 3300009036 Bacteria 2413
34 Ga0105250_10017062 3300009092 Bacteria 2951
35 Ga0105243_10000098 3300009148 Bacteria 99914
36 Ga0105246_10000470 3300011119 Bacteria 21753
37 Ga0157370_10035030 3300013104 Bacteria 4883
38 Ga0157370_10317830 3300013104 Bacteria 1436
39 Ga0157370_10493297 3300013104 Bacteria 1125
40 Ga0163162_10192238 3300013306 Bacteria 2168
41 Ga0182008_10009235 3300014497 Bacteria 5331
42 Ga0182008_10025013 3300014497 Bacteria 3036
43 Ga0182006_1006721 3300015261 Bacteria 5315
44 Ga0182006_1007462 3300015261 Bacteria 5002
45 Ga0182006_1020748 3300015261 Bacteria 2749
46 Ga0182006_1021355 3300015261 Bacteria 2700
47 Ga0182007_10003008 3300015262 Bacteria 8148
48 Ga0182005_1045491 3300015265 Bacteria 1192
49 Ga0163161_10008081 3300017792 Bacteria 7275
50 Ga0163161_10070872 3300017792 Bacteria 2549
51 Ga0163161_10238803 3300017792 Bacteria 1413
52 Ga0209676_1000102 3300025292 Bacteria 227372
53 Ga0209676_1053054 3300025292 Bacteria 1053
54 Ga0209050_1000013 3300025298 Bacteria 811408
55 Ga0209050_1000105 3300025298 Bacteria 227285
56 Ga0209050_1000782 3300025298 Bacteria 45306
57 Ga0209051_1000007 3300025303 Bacteria 811408
58 Ga0209051_1000066 3300025303 Bacteria 227369
59 Ga0209257_1000124 3300025304 Bacteria 218195
60 Ga0209257_1016238 3300025304 Bacteria 3026
61 Ga0207696_1001752 3300025711 Bacteria 11230
62 Ga0207655_1000080 3300025728 Bacteria 214570
63 Ga0207655_1002047 3300025728 Bacteria 17018
64 Ga0207713_1000199 3300025735 Bacteria 83023
65 Ga0207713_1001783 3300025735 Bacteria 16474
66 Ga0207713_1020221 3300025735 Bacteria 3232
67 Ga0207713_1027099 3300025735 Bacteria 2610
68 Ga0207713_1036184 3300025735 Bacteria 2121
69 Ga0207709_10000011 3300025935 Bacteria 552881
70 Ga0209281_1000040 3300027111 Bacteria 353441
71 Ga0209281_1000046 3300027111 Bacteria 327042
72 Ga0209282_1078026 3300027666 Bacteria 1778
73 Ga0207428_10010472 3300027907 Bacteria 8278
74 Ga0207428_10101139 3300027907 Bacteria 2228
75 Ga0207428_10101610 3300027907 Bacteria 2222
76 Ga0314311_1155855 3300030733 Bacteria 2556
77 Ga0307408_100000681 3300031548 Bacteria 28053
78 Ga0307408_100034945 3300031548 Bacteria 3524
79 Ga0307405_10000184 3300031731 Bacteria 23032
80 Ga0307413_10019810 3300031824 Bacteria 3563
81 Ga0307406_10004397 3300031901 Bacteria 7665
82 Ga0307406_10010798 3300031901 Bacteria 5160
83 Ga0307407_10017215 3300031903 Bacteria 3619
84 Ga0307412_10016978 3300031911 Bacteria 4348
85 Ga0307409_100127822 3300031995 Bacteria 2165
86 Ga0307416_100306736 3300032002 Bacteria 1581
87 Ga0307411_10018434 3300032005 Bacteria 4003
88 Ga0439438_000029 3300041405 Bacteria 82129
89 Ga0439438_012222 3300041405 Bacteria 2638
90 Ga0439438_030728 3300041405 Bacteria 1430
91 Ga0439447_000194 3300041407 Bacteria 21677
92 Ga0439447_001296 3300041407 Bacteria 9099
93 Ga0439447_008111 3300041407 Bacteria 3273
94 Ga0439447_014687 3300041407 Bacteria 2189
95 Ga0439466_0000358 3300041411 Bacteria 17547
96 Ga0439466_0003524 3300041411 Bacteria 6054
97 Ga0439466_0007945 3300041411 Bacteria 4001
98 Ga0439466_0016332 3300041411 Bacteria 2684
99 Ga0439431_0000049 3300041997 Bacteria 17790
100 Ga0439432_000924 3300042006 Bacteria 11050
101 Ga0439432_001937 3300042006 Bacteria 7813
102 Ga0439432_003994 3300042006 Bacteria 5420
103 Ga0439432_079529 3300042006 Bacteria 994
104 Ga0439451_002987 3300042009 Bacteria 3436
105 Ga0439451_004648 3300042009 Bacteria 2795
106 Ga0439452_000046 3300042010 Bacteria 130842
107 Ga0439452_000071 3300042010 Bacteria 89088
108 Ga0439452_000777 3300042010 Bacteria 15131
109 Ga0439452_003069 3300042010 Bacteria 5931
110 Ga0439452_047645 3300042010 Bacteria 990
111 Ga0439456_002563 3300042013 Bacteria 3659
112 Ga0439456_005109 3300042013 Bacteria 2665
113 Ga0439456_020559 3300042013 Bacteria 1393
114 Ga0439456_023486 3300042013 Bacteria 1307
115 Ga0439456_036004 3300042013 Bacteria 1067
116 Ga0450922_000493 3300042124 Bacteria 4197
117 Ga0450902_001078 3300042137 Bacteria 3619
118 Ga0450902_001576 3300042137 Bacteria 3127
119 Ga0450902_002456 3300042137 Bacteria 2628
120 Ga0450902_011379 3300042137 Bacteria 1414
121 Ga0450902_021370 3300042137 Bacteria 1070
122 Ga0450905_000751 3300042142 Bacteria 3987
123 Ga0450906_018332 3300042145 Bacteria 1256
124 Ga0450907_000390 3300042146 Bacteria 13314
125 Ga0450907_001251 3300042146 Bacteria 5702
126 Ga0450910_000309 3300042147 Bacteria 5674
127 Ga0439446_0002590 3300042156 Bacteria 4361
128 Ga0450908_004777 3300042184 Bacteria 2606
129 Ga0450909_004967 3300042185 Bacteria 1908
130 Ga0439460_0000599 3300042461 Bacteria 7941
131 Ga0439460_0000841 3300042461 Bacteria 6988
132 Ga0495617_000221 3300046452 Bacteria 34624
133 Ga0495617_004823 3300046452 Bacteria 4860
134 Ga0495617_010146 3300046452 Bacteria 3226
135 Ga0495617_012224 3300046452 Bacteria 2924
136 Ga0495617_024556 3300046452 Bacteria 2034
137 Ga0495627_011575 3300046453 Bacteria 3161
138 Ga0495627_027413 3300046453 Bacteria 1828
139 Ga0495603_0191515 3300046455 Bacteria 1182
140 Ga0495590_0000062 3300046457 Bacteria 82552
141 Ga0495590_0000816 3300046457 Bacteria 14180
142 Ga0495590_0008569 3300046457 Bacteria 3902
143 Ga0495590_0017004 3300046457 Bacteria 2623
144 Ga0495590_0022889 3300046457 Bacteria 2208
145 Ga0495590_0030230 3300046457 Bacteria 1898
146 Ga0495591_000330 3300046458 Bacteria 42741
147 Ga0495591_001375 3300046458 Bacteria 15243
148 Ga0495591_003514 3300046458 Bacteria 8049
149 Ga0495591_009392 3300046458 Bacteria 3894
150 Ga0495591_011036 3300046458 Bacteria 3445
151 Ga0495591_031138 3300046458 Bacteria 1603
152 Ga0495591_039856 3300046458 Bacteria 1343
153 Ga0495591_040343 3300046458 Bacteria 1331
154 Ga0495638_0000088 3300046460 Bacteria 152517
155 Ga0495638_0003254 3300046460 Bacteria 12817
156 Ga0495638_0005915 3300046460 Bacteria 8985
157 Ga0495638_0010342 3300046460 Bacteria 6489
158 Ga0495638_0020556 3300046460 Bacteria 4360
159 Ga0495638_0028258 3300046460 Bacteria 3623
160 Ga0495638_0038193 3300046460 Bacteria 3053
161 Ga0495638_0092913 3300046460 Bacteria 1815
162 Ga0495638_0125257 3300046460 Bacteria 1514
163 Ga0495650_0002334 3300046471 Bacteria 15692
164 Ga0495605_0000250 3300046474 Bacteria 63615
165 Ga0495605_0005119 3300046474 Bacteria 7644
166 Ga0495605_0006757 3300046474 Bacteria 6557
167 Ga0495605_0007712 3300046474 Bacteria 6100
168 Ga0495605_0010183 3300046474 Bacteria 5264
169 Ga0495605_0040121 3300046474 Bacteria 2341
170 Ga0495605_0052655 3300046474 Bacteria 1977
171 Ga0495605_0075793 3300046474 Bacteria 1581
172 Ga0495605_0101572 3300046474 Bacteria 1321
173 Ga0495584_0000443 3300046491 Bacteria 28551
174 Ga0495584_0006215 3300046491 Bacteria 6266
175 Ga0495584_0037838 3300046491 Bacteria 2439
176 Ga0495584_0058705 3300046491 Bacteria 1935
177 Ga0495584_0162121 3300046491 Bacteria 1136
178 Ga0495585_0002108 3300046492 Bacteria 14545
179 Ga0495585_0013838 3300046492 Bacteria 4714
180 Ga0495596_0000225 3300046500 Bacteria 38452
181 Ga0495607_0000251 3300046501 Bacteria 57660
182 Ga0495607_0001675 3300046501 Bacteria 19157
183 Ga0495607_0009212 3300046501 Bacteria 6709
184 Ga0495607_0020363 3300046501 Bacteria 4195
185 Ga0495607_0027762 3300046501 Bacteria 3496
186 Ga0495607_0080573 3300046501 Bacteria 1790
187 Ga0495607_0117491 3300046501 Bacteria 1401
188 Ga0495583_0000239 3300046506 Bacteria 91038
189 Ga0495606_0001983 3300046507 Bacteria 25232
190 Ga0495606_0002148 3300046507 Bacteria 23760
191 Ga0495610_0000259 3300046512 Bacteria 55671
192 Ga0495610_0003589 3300046512 Bacteria 11989
193 Ga0495610_0007379 3300046512 Bacteria 7335
194 Ga0495610_0012078 3300046512 Bacteria 5223
195 Ga0495610_0040936 3300046512 Bacteria 2330
196 Ga0495610_0090972 3300046512 Bacteria 1383
197 Ga0495616_0008725 3300046513 Bacteria 5977
198 Ga0495616_0020479 3300046513 Bacteria 3596
199 Ga0495616_0034220 3300046513 Bacteria 2640
200 Ga0495616_0098668 3300046513 Bacteria 1372
201 Ga0495620_0001936 3300046515 Bacteria 12117
202 Ga0495620_0008547 3300046515 Bacteria 5491
203 Ga0495620_0018660 3300046515 Bacteria 3431
204 Ga0495631_0020981 3300046518 Bacteria 3045
205 Ga0495631_0061861 3300046518 Bacteria 1623
206 Ga0495632_0005172 3300046519 Bacteria 8704
207 Ga0495632_0018654 3300046519 Bacteria 3802
208 Ga0495632_0041504 3300046519 Bacteria 2312
209 Ga0495632_0057982 3300046519 Bacteria 1888
210 Ga0495632_0075544 3300046519 Bacteria 1612
211 Ga0495637_0000712 3300046520 Bacteria 22748
212 Ga0495637_0001072 3300046520 Bacteria 17042
213 Ga0495637_0002979 3300046520 Bacteria 9106
214 Ga0495637_0009418 3300046520 Bacteria 4765
215 Ga0495637_0012234 3300046520 Bacteria 4107
216 Ga0495637_0051343 3300046520 Bacteria 1726
217 Ga0495643_0006060 3300046522 Bacteria 8052
218 Ga0495643_0012673 3300046522 Bacteria 5078
219 Ga0495643_0016108 3300046522 Bacteria 4399
220 Ga0495643_0126749 3300046522 Bacteria 1285
221 Ga0495643_0174573 3300046522 Bacteria 1048
222 Ga0495644_0000005 3300046523 Bacteria 135313
223 Ga0495644_0000160 3300046523 Bacteria 31939
224 Ga0495644_0022741 3300046523 Bacteria 2387
225 Ga0495644_0031557 3300046523 Bacteria 2002
226 Ga0495648_0000185 3300046524 Bacteria 71360
227 Ga0495648_0000642 3300046524 Bacteria 37256
228 Ga0495648_0005792 3300046524 Bacteria 10188
229 Ga0495648_0007532 3300046524 Bacteria 8702
230 Ga0495648_0025345 3300046524 Bacteria 4016
231 Ga0495648_0043995 3300046524 Bacteria 2791
232 Ga0495648_0054140 3300046524 Bacteria 2426
233 Ga0495648_0108624 3300046524 Bacteria 1514
234 Ga0495648_0173405 3300046524 Bacteria 1103
235 Ga0495642_0000006 3300046528 Bacteria 172412
236 Ga0495654_0000498 3300046530 Bacteria 32130
237 Ga0495654_0001044 3300046530 Bacteria 20280
238 Ga0495654_0001529 3300046530 Bacteria 15750
239 Ga0495654_0005560 3300046530 Bacteria 7299
240 Ga0495654_0014402 3300046530 Bacteria 4208
241 Ga0495654_0056859 3300046530 Bacteria 1890
242 Ga0495654_0172567 3300046530 Bacteria 941
243 Ga0495609_0030404 3300046538 Bacteria 2458
244 Ga0495609_0172698 3300046538 Bacteria 912
245 Ga0495597_0001014 3300046542 Bacteria 21518
246 Ga0495597_0005171 3300046542 Bacteria 6950
247 Ga0495597_0017222 3300046542 Bacteria 3404
248 Ga0495597_0018209 3300046542 Bacteria 3298
249 Ga0495597_0024108 3300046542 Bacteria 2809
250 Ga0495597_0025900 3300046542 Bacteria 2697
251 Ga0495597_0087997 3300046542 Bacteria 1321
252 Ga0495622_0002738 3300046557 Bacteria 8439
253 Ga0495633_0020875 3300046558 Bacteria 3286
254 Ga0495656_0010213 3300046615 Bacteria 3406
255 Ga0495656_0021688 3300046615 Bacteria 2504
256 Ga0495668_0000253 3300046616 Bacteria 76112
257 Ga0495668_0031365 3300046616 Bacteria 2995
258 Ga0495668_0061266 3300046616 Bacteria 2075
259 Ga0495611_0088899 3300046648 Bacteria 1426
260 Ga0495611_0103765 3300046648 Bacteria 1322
261 Ga0495625_0011576 3300046660 Bacteria 7181
262 Ga0495625_0012072 3300046660 Bacteria 7010
263 Ga0495625_0013017 3300046660 Bacteria 6710
264 Ga0495625_0031088 3300046660 Bacteria 3974
265 Ga0495625_0316036 3300046660 Bacteria 995
266 Ga0495659_0009762 3300046664 Bacteria 3071
267 Ga0495661_0003200 3300046665 Bacteria 12233
268 Ga0495661_0006911 3300046665 Bacteria 7935
269 Ga0495661_0011805 3300046665 Bacteria 5918
270 Ga0495661_0017023 3300046665 Bacteria 4803
271 Ga0495661_0048817 3300046665 Bacteria 2569
272 Ga0495588_0000459 3300046674 Bacteria 20480
273 Ga0495588_0010735 3300046674 Bacteria 4273
274 Ga0495669_0053447 3300046684 Bacteria 1816
275 Ga0495613_0003376 3300046689 Bacteria 11931
276 Ga0495670_0000131 3300046691 Bacteria 32446
277 Ga0495670_0000491 3300046691 Bacteria 18744
278 Ga0495670_0002509 3300046691 Bacteria 9068
279 Ga0495670_0009442 3300046691 Bacteria 4795
280 Ga0495670_0014260 3300046691 Bacteria 3909
281 Ga0495670_0025522 3300046691 Bacteria 2923
282 Ga0495670_0081083 3300046691 Bacteria 1653
283 Ga0495671_0001769 3300046692 Bacteria 13984
284 Ga0495671_0003088 3300046692 Bacteria 10348
285 Ga0495671_0019448 3300046692 Bacteria 3590
286 Ga0495671_0065754 3300046692 Bacteria 1784
287 Ga0495649_0000060 3300046694 Bacteria 97624
288 Ga0495649_0002650 3300046694 Bacteria 12464
289 Ga0495649_0005481 3300046694 Bacteria 8057
290 Ga0495649_0019855 3300046694 Bacteria 3773
291 Ga0495649_0024672 3300046694 Bacteria 3352
292 Ga0495649_0033340 3300046694 Bacteria 2834
293 Ga0495649_0040961 3300046694 Bacteria 2534
294 Ga0495649_0056234 3300046694 Bacteria 2124
295 Ga0495649_0063079 3300046694 Bacteria 1991
296 Ga0495589_0000629 3300046794 Bacteria 23217
297 Ga0495589_0000761 3300046794 Bacteria 20583
298 Ga0495589_0021050 3300046794 Bacteria 3333
299 Ga0495589_0051806 3300046794 Bacteria 2028
300 Ga0495589_0183252 3300046794 Bacteria 992
301 Ga0495660_0001322 3300046810 Bacteria 17096
302 Ga0495660_0004959 3300046810 Bacteria 8013
303 Ga0495660_0035639 3300046810 Bacteria 2779
304 Ga0495660_0038600 3300046810 Bacteria 2654
305 Ga0495660_0046868 3300046810 Bacteria 2369
306 Ga0495660_0119579 3300046810 Bacteria 1334
307 Ga0495660_0156398 3300046810 Bacteria 1121
308 Ga0495672_0000158 3300047320 Bacteria 98531
309 Ga0495672_0004811 3300047320 Bacteria 10888
310 Ga0495672_0005190 3300047320 Bacteria 10381
311 Ga0495672_0009763 3300047320 Bacteria 6914
312 Ga0495672_0013593 3300047320 Bacteria 5607
313 Ga0495672_0034367 3300047320 Bacteria 3133
314 Ga0495672_0036365 3300047320 Bacteria 3024
315 Ga0495672_0098657 3300047320 Bacteria 1589
316 Ga0495683_0000111 3300047323 Bacteria 83676
317 Ga0495683_0000834 3300047323 Bacteria 21969
318 Ga0495683_0002675 3300047323 Bacteria 10627
319 Ga0495683_0008648 3300047323 Bacteria 5437
320 Ga0495683_0018557 3300047323 Bacteria 3594
321 Ga0495683_0040389 3300047323 Bacteria 2357
322 Ga0495687_000222 3300047443 Bacteria 80818
323 Ga0495687_000377 3300047443 Bacteria 55506
324 Ga0495677_0148093 3300047445 Bacteria 903
325 Ga0495673_0000288 3300047469 Bacteria 67701
326 Ga0495673_0000335 3300047469 Bacteria 60281
327 Ga0495673_0000361 3300047469 Bacteria 55783
328 Ga0495673_0001287 3300047469 Bacteria 20462
329 Ga0495673_0006230 3300047469 Bacteria 7055
330 Ga0495673_0030463 3300047469 Bacteria 2533
331 Ga0495673_0037324 3300047469 Bacteria 2219
332 Ga0495673_0062072 3300047469 Bacteria 1597
333 Ga0495673_0111889 3300047469 Bacteria 1090
334 Ga0495681_0000029 3300047470 Bacteria 134816
335 Ga0495681_0000141 3300047470 Bacteria 60621
336 Ga0495681_0000668 3300047470 Bacteria 26039
337 Ga0495681_0010829 3300047470 Bacteria 5487
338 Ga0495681_0027951 3300047470 Bacteria 2910
339 Ga0495681_0040118 3300047470 Bacteria 2281
340 Ga0495681_0073411 3300047470 Bacteria 1545
341 Ga0495686_0030252 3300047472 Bacteria 3517
342 Ga0495686_0030343 3300047472 Bacteria 3511
343 Ga0495614_0096042 3300048089 Bacteria 1292
344 Ga0495626_0000032 3300048091 Bacteria 184235
345 Ga0495626_0000072 3300048091 Bacteria 134289
346 Ga0495626_0000156 3300048091 Bacteria 85043
347 Ga0495626_0000351 3300048091 Bacteria 48029
348 Ga0495626_0019641 3300048091 Bacteria 3377
349 Ga0495626_0035182 3300048091 Bacteria 2391
350 Ga0495626_0111629 3300048091 Bacteria 1183
351 Ga0496110_0008890 3300048913 Bacteria 8098
352 Ga0496110_0351334 3300048913 Bacteria 1343
353 Ga0496116_0001015 3300048919 Bacteria 34238
354 Ga0496116_0059284 3300048919 Bacteria 2491
355 Ga0496117_0000475 3300048920 Bacteria 66690
356 Ga0496117_0037440 3300048920 Bacteria 3613
357 Ga0496117_0061002 3300048920 Bacteria 2595
358 Ga0496117_0134596 3300048920 Bacteria 1491
359 Ga0496118_0000482 3300048921 Bacteria 66218
360 Ga0496118_0042484 3300048921 Bacteria 3585
361 Ga0496118_0063908 3300048921 Bacteria 2705
362 Ga0496121_0028238 3300048924 Bacteria 5228
363 Ga0496121_0047929 3300048924 Bacteria 3640
364 Ga0496122_0019966 3300048925 Bacteria 6091
365 Ga0496123_0001027 3300048926 Bacteria 42422
366 Ga0496124_0000547 3300048927 Bacteria 63558
367 Ga0496124_0019950 3300048927 Bacteria 6216
368 Ga0496124_0082358 3300048927 Bacteria 2641
369 Ga0495678_001452 3300049459 Bacteria 18640
370 Ga0495678_002713 3300049459 Bacteria 11667
371 Ga0495678_004902 3300049459 Bacteria 7562
372 Ga0495678_017392 3300049459 Bacteria 3260
373 Ga0495682_0019983 3300049460 Bacteria 2515
374 Ga0495682_0028059 3300049460 Bacteria 2087
375 nmdc:mga03683_18548_c1 3300050489 Bacteria 2646
376 nmdc:mga03683_22471_c1 3300050489 Bacteria 2446
377 nmdc:mga00v17_150792_c1 3300050491 Bacteria 1494
378 nmdc:mga00v17_21015_c1 3300050491 Bacteria 3748
379 nmdc:mga00v17_361867_c1 3300050491 Bacteria 943
380 nmdc:mga00v17_41694_c1 3300050491 Bacteria 2758
381 nmdc:mga08x19_35734_c1 3300050514 Bacteria 3145
382 2511293001 2511231010 Bacteria 6373152
383 2511303554 2511231012 Bacteria 6738011
384 2511317592 2511231015 Bacteria 6598026
385 2511332910 2511231017 Bacteria 6503007
386 2511352849 2511231020 Bacteria 6115223
387 2511358149 2511231021 Bacteria 7302637
388 2511825043 2511231156 Bacteria 6845832
389 2599615410 2599185212 Bacteria 6765997
390 2599768885 2599185248 Bacteria 6696816
391 2599884667 2599185289 Bacteria 6778765
392 2599896154 2599185291 Bacteria 6775623
393 2599958040 2599185305 Bacteria 6748700
394 2599968841 2599185306 Bacteria 6637356
395 2599980041 2599185308 Bacteria 6621546
396 2599992763 2599185311 Bacteria 6354990
397 2600003874 2599185313 Bacteria 6658188
398 2600013917 2599185314 Bacteria 6621749
399 2600015763 2599185315 Bacteria 6771107
400 2600023039 2599185316 Bacteria 6320029
401 2600028160 2599185317 Bacteria 6435722
402 2600034062 2599185318 Bacteria 6961590
403 2600040414 2599185319 Bacteria 6637840
404 2600050970 2599185321 Bacteria 6764560
405 2600056855 2599185322 Bacteria 6763055
406 2600063420 2599185323 Bacteria 6688755
407 2600069046 2599185324 Bacteria 6590677
408 2600076787 2599185325 Bacteria 6324919
409 2600357391 2600254930 Bacteria 6431253
410 2601796159 2600255318 Bacteria 6383414
411 2606074987 2603880185 Bacteria 6379190
412 2606127851 2603880199 Bacteria 6377649
413 2643954558 2643221589 Bacteria 6250934
414 2644023367 2643221602 Bacteria 6249926
415 2644281167 2643221650 Bacteria 7029547
416 2652548795 2651869719 Bacteria 6047974
417 2671088848 2667528170 Bacteria 6786960
418 2671124884 2667528176 Bacteria 6724917
419 2678263799 2675903515 Bacteria 6580491
420 2715758399 2713897149 Bacteria 6506249
421 2739197444 2738543004 Bacteria 6381073
422 2739262344 2738543015 Bacteria 6750701
423 2745004252 2744054620 Bacteria 6551379
424 2794598048 2791355520 Bacteria 5948615
425 2808958208 2808606382 Bacteria 6841132
426 2825652179 2825651385 Bacteria 6715909
427 2878032117 2878029506 Bacteria 6418441
428 2913040266 2913036834 Bacteria 6704877
429 2919068592 2919063839 Bacteria 6302690
430 2923588235 2923586266 Bacteria 6565975
431 2929147813 2929144301 Bacteria 6622272
432 2931374976 2931369376 Bacteria 6847892
433 2939638720 2939636861 Bacteria 6297853
434 3007514738 3007511990 Bacteria 6481491
435 3007868882 3007866637 Bacteria 5899198
436 8056129058 8056125926 Bacteria 6228218
437 Ga0439438_000225
438 SwRhRL2b_contig_1351428
439 Ga0055536_1000115
440 Ga0055530_10000122
441 Ga0055530_10006048
442 Ga0055530_10015209
443 Ga0055540_1000155
444 Ga0055540_1000204
445 Ga0055531_10005347
446 Ga0065714_10003714
447 Ga0065714_10067404
448 Ga0065714_10079191
449 Ga0065704_10070517
450 Ga0075364_10026811
451 Ga0075364_10045941
452 Ga0075432_10005206
453 Ga0075362_10015328
454 Ga0075362_10021086
455 Ga0075362_10028208
456 Ga0075436_100105582
457 Ga0075436_100120219
458 Ga0075436_100344063
459 Ga0079104_1000054
460 Ga0079104_1000245
461 Ga0099826_10018326
462 Ga0105251_10001281
463 Ga0105251_10009793
464 Ga0105251_10013682
465 Ga0105251_10052253
466 Ga0105251_10060714
467 Ga0105244_10000602
468 Ga0105244_10009030
469 Ga0105244_10040638
470 Ga0105250_10017062
471 Ga0105243_10000098
472 Ga0105246_10000470
473 Ga0157370_10035030
474 Ga0157370_10317830
475 Ga0157370_10493297
476 Ga0163162_10192238
477 Ga0182008_10009235
478 Ga0182008_10025013
479 Ga0182006_1006721
480 Ga0182006_1007462
481 Ga0182006_1020748
482 Ga0182006_1021355
483 Ga0182007_10003008
484 Ga0182005_1045491
485 Ga0163161_10008081
486 Ga0163161_10070872
487 Ga0163161_10238803
488 Ga0209676_1000102
489 Ga0209676_1053054
490 Ga0209050_1000013
491 Ga0209050_1000105
492 Ga0209050_1000782
493 Ga0209051_1000007
494 Ga0209051_1000066
495 Ga0209257_1000124
496 Ga0209257_1016238
497 Ga0207696_1001752
498 Ga0207655_1000080
499 Ga0207655_1002047
500 Ga0207713_1000199
501 Ga0207713_1001783
502 Ga0207713_1020221
503 Ga0207713_1027099
504 Ga0207713_1036184
505 Ga0207709_10000011
506 Ga0209281_1000040
507 Ga0209281_1000046
508 Ga0209282_1078026
509 Ga0207428_10010472
510 Ga0207428_10101139
511 Ga0207428_10101610
512 Ga0314311_1155855
513 Ga0307408_100000681
514 Ga0307408_100034945
515 Ga0307405_10000184
516 Ga0307413_10019810
517 Ga0307406_10004397
518 Ga0307406_10010798
519 Ga0307407_10017215
520 Ga0307412_10016978
521 Ga0307409_100127822
522 Ga0307416_100306736
523 Ga0307411_10018434
524 Ga0439438_000029
525 Ga0439438_012222
526 Ga0439438_030728
527 Ga0439447_000194
528 Ga0439447_001296
529 Ga0439447_008111
530 Ga0439447_014687
531 Ga0439466_0000358
532 Ga0439466_0003524
533 Ga0439466_0007945
534 Ga0439466_0016332
535 Ga0439431_0000049
536 Ga0439432_000924
537 Ga0439432_001937
538 Ga0439432_003994
539 Ga0439432_079529
540 Ga0439451_002987
541 Ga0439451_004648
542 Ga0439452_000046
543 Ga0439452_000071
544 Ga0439452_000777
545 Ga0439452_003069
546 Ga0439452_047645
547 Ga0439456_002563
548 Ga0439456_005109
549 Ga0439456_020559
550 Ga0439456_023486
551 Ga0439456_036004
552 Ga0450922_000493
553 Ga0450902_001078
554 Ga0450902_001576
555 Ga0450902_002456
556 Ga0450902_011379
557 Ga0450902_021370
558 Ga0450905_000751
559 Ga0450906_018332
560 Ga0450907_000390
561 Ga0450907_001251
562 Ga0450910_000309
563 Ga0439446_0002590
564 Ga0450908_004777
565 Ga0450909_004967
566 Ga0439460_0000599
567 Ga0439460_0000841
568 Ga0495617_000221
569 Ga0495617_004823
570 Ga0495617_010146
571 Ga0495617_012224
572 Ga0495617_024556
573 Ga0495627_011575
574 Ga0495627_027413
575 Ga0495603_0191515
576 Ga0495590_0000062
577 Ga0495590_0000816
578 Ga0495590_0008569
579 Ga0495590_0017004
580 Ga0495590_0022889
581 Ga0495590_0030230
582 Ga0495591_000330
583 Ga0495591_001375
584 Ga0495591_003514
585 Ga0495591_009392
586 Ga0495591_011036
587 Ga0495591_031138
588 Ga0495591_039856
589 Ga0495591_040343
590 Ga0495638_0000088
591 Ga0495638_0003254
592 Ga0495638_0005915
593 Ga0495638_0010342
594 Ga0495638_0020556
595 Ga0495638_0028258
596 Ga0495638_0038193
597 Ga0495638_0092913
598 Ga0495638_0125257
599 Ga0495650_0002334
600 Ga0495605_0000250
601 Ga0495605_0005119
602 Ga0495605_0006757
603 Ga0495605_0007712
604 Ga0495605_0010183
605 Ga0495605_0040121
606 Ga0495605_0052655
607 Ga0495605_0075793
608 Ga0495605_0101572
609 Ga0495584_0000443
610 Ga0495584_0006215
611 Ga0495584_0037838
612 Ga0495584_0058705
613 Ga0495584_0162121
614 Ga0495585_0002108
615 Ga0495585_0013838
616 Ga0495596_0000225
617 Ga0495607_0000251
618 Ga0495607_0001675
619 Ga0495607_0009212
620 Ga0495607_0020363
621 Ga0495607_0027762
622 Ga0495607_0080573
623 Ga0495607_0117491
624 Ga0495583_0000239
625 Ga0495606_0001983
626 Ga0495606_0002148
627 Ga0495610_0000259
628 Ga0495610_0003589
629 Ga0495610_0007379
630 Ga0495610_0012078
631 Ga0495610_0040936
632 Ga0495610_0090972
633 Ga0495616_0008725
634 Ga0495616_0020479
635 Ga0495616_0034220
636 Ga0495616_0098668
637 Ga0495620_0001936
638 Ga0495620_0008547
639 Ga0495620_0018660
640 Ga0495631_0020981
641 Ga0495631_0061861
642 Ga0495632_0005172
643 Ga0495632_0018654
644 Ga0495632_0041504
645 Ga0495632_0057982
646 Ga0495632_0075544
647 Ga0495637_0000712
648 Ga0495637_0001072
649 Ga0495637_0002979
650 Ga0495637_0009418
651 Ga0495637_0012234
652 Ga0495637_0051343
653 Ga0495643_0006060
654 Ga0495643_0012673
655 Ga0495643_0016108
656 Ga0495643_0126749
657 Ga0495643_0174573
658 Ga0495644_0000005
659 Ga0495644_0000160
660 Ga0495644_0022741
661 Ga0495644_0031557
662 Ga0495648_0000185
663 Ga0495648_0000642
664 Ga0495648_0005792
665 Ga0495648_0007532
666 Ga0495648_0025345
667 Ga0495648_0043995
668 Ga0495648_0054140
669 Ga0495648_0108624
670 Ga0495648_0173405
671 Ga0495642_0000006
672 Ga0495654_0000498
673 Ga0495654_0001044
674 Ga0495654_0001529
675 Ga0495654_0005560
676 Ga0495654_0014402
677 Ga0495654_0056859
678 Ga0495654_0172567
679 Ga0495609_0030404
680 Ga0495609_0172698
681 Ga0495597_0001014
682 Ga0495597_0005171
683 Ga0495597_0017222
684 Ga0495597_0018209
685 Ga0495597_0024108
686 Ga0495597_0025900
687 Ga0495597_0087997
688 Ga0495622_0002738
689 Ga0495633_0020875
690 Ga0495656_0010213
691 Ga0495656_0021688
692 Ga0495668_0000253
693 Ga0495668_0031365
694 Ga0495668_0061266
695 Ga0495611_0088899
696 Ga0495611_0103765
697 Ga0495625_0011576
698 Ga0495625_0012072
699 Ga0495625_0013017
700 Ga0495625_0031088
701 Ga0495625_0316036
702 Ga0495659_0009762
703 Ga0495661_0003200
704 Ga0495661_0006911
705 Ga0495661_0011805
706 Ga0495661_0017023
707 Ga0495661_0048817
708 Ga0495588_0000459
709 Ga0495588_0010735
710 Ga0495669_0053447
711 Ga0495613_0003376
712 Ga0495670_0000131
713 Ga0495670_0000491
714 Ga0495670_0002509
715 Ga0495670_0009442
716 Ga0495670_0014260
717 Ga0495670_0025522
718 Ga0495670_0081083
719 Ga0495671_0001769
720 Ga0495671_0003088
721 Ga0495671_0019448
722 Ga0495671_0065754
723 Ga0495649_0000060
724 Ga0495649_0002650
725 Ga0495649_0005481
726 Ga0495649_0019855
727 Ga0495649_0024672
728 Ga0495649_0033340
729 Ga0495649_0040961
730 Ga0495649_0056234
731 Ga0495649_0063079
732 Ga0495589_0000629
733 Ga0495589_0000761
734 Ga0495589_0021050
735 Ga0495589_0051806
736 Ga0495589_0183252
737 Ga0495660_0001322
738 Ga0495660_0004959
739 Ga0495660_0035639
740 Ga0495660_0038600
741 Ga0495660_0046868
742 Ga0495660_0119579
743 Ga0495660_0156398
744 Ga0495672_0000158
745 Ga0495672_0004811
746 Ga0495672_0005190
747 Ga0495672_0009763
748 Ga0495672_0013593
749 Ga0495672_0034367
750 Ga0495672_0036365
751 Ga0495672_0098657
752 Ga0495683_0000111
753 Ga0495683_0000834
754 Ga0495683_0002675
755 Ga0495683_0008648
756 Ga0495683_0018557
757 Ga0495683_0040389
758 Ga0495687_000222
759 Ga0495687_000377
760 Ga0495677_0148093
761 Ga0495673_0000288
762 Ga0495673_0000335
763 Ga0495673_0000361
764 Ga0495673_0001287
765 Ga0495673_0006230
766 Ga0495673_0030463
767 Ga0495673_0037324
768 Ga0495673_0062072
769 Ga0495673_0111889
770 Ga0495681_0000029
771 Ga0495681_0000141
772 Ga0495681_0000668
773 Ga0495681_0010829
774 Ga0495681_0027951
775 Ga0495681_0040118
776 Ga0495681_0073411
777 Ga0495686_0030252
778 Ga0495686_0030343
779 Ga0495614_0096042
780 Ga0495626_0000032
781 Ga0495626_0000072
782 Ga0495626_0000156
783 Ga0495626_0000351
784 Ga0495626_0019641
785 Ga0495626_0035182
786 Ga0495626_0111629
787 Ga0496110_0008890
788 Ga0496110_0351334
789 Ga0496116_0001015
790 Ga0496116_0059284
791 Ga0496117_0000475
792 Ga0496117_0037440
793 Ga0496117_0061002
794 Ga0496117_0134596
795 Ga0496118_0000482
796 Ga0496118_0042484
797 Ga0496118_0063908
798 Ga0496121_0028238
799 Ga0496121_0047929
800 Ga0496122_0019966
801 Ga0496123_0001027
802 Ga0496124_0000547
803 Ga0496124_0019950
804 Ga0496124_0082358
805 Ga0495678_001452
806 Ga0495678_002713
807 Ga0495678_004902
808 Ga0495678_017392
809 Ga0495682_0019983
810 Ga0495682_0028059
811 nmdc:mga03683_18548_c1
812 nmdc:mga03683_22471_c1
813 nmdc:mga00v17_150792_c1
814 nmdc:mga00v17_21015_c1
815 nmdc:mga00v17_361867_c1
816 nmdc:mga00v17_41694_c1
817 nmdc:mga08x19_35734_c1
818 2511293001
819 2511303554
820 2511317592
821 2511332910
822 2511352849
823 2511358149
824 2511825043
825 2599615410
826 2599768885
827 2599884667
828 2599896154
829 2599958040
830 2599968841
831 2599980041
832 2599992763
833 2600003874
834 2600013917
835 2600015763
836 2600023039
837 2600028160
838 2600034062
839 2600040414
840 2600050970
841 2600056855
842 2600063420
843 2600069046
844 2600076787
845 2600357391
846 2601796159
847 2606074987
848 2606127851
849 2643954558
850 2644023367
851 2644281167
852 2652548795
853 2671088848
854 2671124884
855 2678263799
856 2715758399
857 2739197444
858 2739262344
859 2745004252
860 2794598048
861 2808958208
862 2825652179
863 2878032117
864 2913040266
865 2919068592
866 2923588235
867 2929147813
868 2931374976
869 2939638720
870 3007514738
871 3007868882
872 8056129058

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

190

269

0.96

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

229

268

0.92

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

181

217

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3oio-assembly1.cif.gz_A crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum 0.8664 168 267
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.8586 168 268
3mkl-assembly1.cif.gz_A crystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12 0.8545 168 269
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8505 169 266
7w5x-assembly1.cif.gz_K cryo-em structure of soxs-dependent transcription activation complex with zwf promoter dna 0.8459 169 269
ID Description Score Start End Superfamily
3lsgC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9528 222 266 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9435 222 266 1.10.10.60
3lsgB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.935 222 266 1.10.10.60
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9305 220 268 1.10.10.60
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9073 213 268 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A1G8AJA1-F1-model_v4 Helix-turn-helix domain-containing protein 0.9389 184 270 GO:0003700
GO:0043565
AF-A0A2D0N1H6-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9042 167 268 GO:0003700
GO:0016020
GO:0043565
AF-A0A6P0ZL01-F1-model_v4 deleted 0.9035 163 267
AF-A0A4R5YYA1-F1-model_v4 deleted 0.9033 174 268
AF-A0A1H9CIJ8-F1-model_v4 AraC-type DNA-binding protein 0.9031 184 267 GO:0003700
GO:0009893
GO:0043565

Map