F452260

General Info

Members Datasets Scaffolds Average Seq Length
480 432 158 485

Family's Representative Sequence

Representative Sequence 3300039093|Ga0400489_05923|Ga0400489_05923_1139_2617
Length 492
Sequence MNMAKRAVLAVDQGTTNSKAILLAPTGAVIARGAAPVETKHPRSGWVEQDPRQIWKSVLAAIQACLGQASDFDIAALGISNQRESVLIWDRKTGAPLGPAVTWQCRRTAAACEKLKADGHEMDVISRTGLPLDPLFPSTKVGWLLDNHGQGRPADNICLGTVDAWLIWNFSGGAVHATDSSNAARTQLYNIAQGRWDDDLCRLFGVPPAILPEVRDSAAIFGETAGVAGLPDGLPIASAIGDSHGALFGHGAFTPGDGKITFGTGSSVMTTVPKFLAPPKGITATIAWSLDGKPTFALEGNILVSAAILPWAADLLGVGSVDELLQLAQTVANTEGVALVPAHVGLGSPHWNANSRGVLCGLSFAAKPAHVALAAAQSMALQVYDVFKVMASDAGQKIGKLFVDGGPSQNRFLMALVAGYLNHAVIISESAEASARGAAYLAGLATGIWPDQTAVATLGGQGDQLDPAMEDATREATIAAWRTAIDRCLLGT

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
3 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
4 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
5 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
6 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
7 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
8 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
9 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
10 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
11 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
12 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
13 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
14 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
15 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
16 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
17 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
18 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
19 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
20 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
21 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
22 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
23 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
24 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
25 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
26 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
27 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
28 2516143018 Ensifer sp. BR816 Isolate Nodule
29 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
30 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
31 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
32 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
33 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
34 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
35 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
36 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
37 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
38 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
39 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
40 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
41 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
42 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
43 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
44 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
45 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
46 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
47 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
48 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
49 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
50 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
51 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
52 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
53 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
54 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
55 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
56 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
57 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
58 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
59 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
60 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
61 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
62 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
63 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
64 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
65 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
66 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
67 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
68 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
69 2643221568 Rhizobium sp. Root564 Isolate Unclassified
70 2643221582 Rhizobium sp. Root651 Isolate Unclassified
71 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
72 2643221693 Rhizobium sp. Root491 Isolate Unclassified
73 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
74 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
75 2718217927 Rhizobium sp. N324 Isolate Nodule
76 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
77 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
78 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
79 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
80 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
81 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
82 2718218423 Rhizobium sp. N941 Isolate Nodule
83 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
84 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
85 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
86 2721755809 Rhizobium sp. N541 Isolate Nodule
87 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
88 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
89 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
90 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
91 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
92 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
93 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
94 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
95 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
96 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
97 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
98 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
99 2791355256 Rhizobium sp. M10 Isolate Nodule
100 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
101 2791355260 Rhizobium sp. L9 Isolate Nodule
102 2791355261 Rhizobium sp. J15 Isolate Nodule
103 2791355262 Rhizobium sp. M1 Isolate Nodule
104 2791355263 Rhizobium chutanense C5 Isolate Nodule
105 2791355265 Rhizobium sp. H4 Isolate Nodule
106 2791355266 Rhizobium sp. L43 Isolate Nodule
107 2791355267 Rhizobium sp. L18 Isolate Nodule
108 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
109 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
110 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
111 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
112 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
113 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
114 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
115 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
116 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
117 2802429633 Rhizobium anhuiense J3 Isolate Nodule
118 2802429634 Rhizobium anhuiense S10 Isolate Nodule
119 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
120 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
121 2802429637 Rhizobium anhuiense C15 Isolate Nodule
122 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
123 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
124 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
125 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
126 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
127 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
128 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
129 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
130 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
131 2838048938 Rhizobium pisi 27/80 Isolate Nodule
132 2838061910 Rhizobium phaseoli L15 Isolate Nodule
133 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
134 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
135 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
136 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
137 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
138 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
139 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
140 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
141 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
142 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
143 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
144 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
145 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
146 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
147 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
148 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
149 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
150 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
151 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
152 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
153 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
154 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
155 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
156 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
157 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
158 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
159 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
160 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
161 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
162 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
163 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
164 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
165 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
166 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
167 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
168 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
169 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
170 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
171 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
172 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
173 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
174 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
175 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
176 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
177 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
178 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
179 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
180 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
181 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
182 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
183 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
184 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
185 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
186 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
187 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
188 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
189 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
190 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
191 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
192 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
193 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
194 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
195 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
196 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
197 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
198 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
199 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
200 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
201 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
202 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
203 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
204 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
205 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
206 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
207 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
208 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
209 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
210 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
211 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
212 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
213 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
214 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
215 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
216 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
217 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
218 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
219 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
220 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
221 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
222 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
223 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
224 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
225 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
226 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
227 2933599457 Rhizobium phaseoli M3 Isolate Nodule
228 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
229 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
230 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
231 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
232 2936381700 Rhizobium chutanense C16 Isolate Unclassified
233 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
234 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
235 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
236 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
237 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
238 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
239 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
240 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
241 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
242 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
243 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
244 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
245 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
246 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
247 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
248 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
249 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
250 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
251 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
252 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
253 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
254 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
255 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
256 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
257 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
258 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
259 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
260 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
261 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
262 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
263 2970082768 Sinorhizobium meliloti USDA1803 Isolate Nodule
264 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
265 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
266 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
267 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
268 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
269 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
270 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
271 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
272 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
273 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
274 2996893221 Rhizobium sp. R635 Isolate Nodule
275 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
276 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
277 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
278 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
279 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
280 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
281 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
282 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
283 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
284 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
285 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
286 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
287 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
288 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
289 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
290 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
291 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
292 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
293 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
294 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
295 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
296 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
297 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
298 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
299 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
300 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
301 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
302 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
303 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
304 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
305 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
306 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
307 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
308 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
309 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
310 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
311 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
312 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
313 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
314 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
315 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
316 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
317 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
318 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
319 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
320 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
321 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
322 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
323 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
324 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
325 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
326 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
327 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
328 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
329 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
330 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
331 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
332 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
333 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
334 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
335 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
336 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
337 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
338 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
339 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
340 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
341 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
342 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
343 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
344 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
345 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
346 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
347 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
348 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
349 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
350 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
351 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
352 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
353 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
354 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
355 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
356 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
357 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
358 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
359 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
360 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
361 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
362 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
363 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
364 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
365 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
366 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
367 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
368 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
369 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
370 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
371 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
372 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
373 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
374 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
375 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
376 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
377 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
378 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
379 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
380 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
381 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
382 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
383 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
384 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
385 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
386 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
387 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
388 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
389 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
390 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
391 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
392 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
393 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
394 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
395 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
396 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
397 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
398 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
399 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
400 8005275841 Rhizobium sp. N4311 Isolate Nodule
401 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
402 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
403 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
404 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
405 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
406 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
407 8005382845 Rhizobium sp. R634 Isolate Nodule
408 8005395548 Rhizobium sp. R339 Isolate Nodule
409 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
410 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
411 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
412 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
413 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
414 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
415 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
416 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
417 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
418 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
419 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
420 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
421 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
422 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
423 8018176218 Rhizobium sp. N122 Isolate Nodule
424 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
425 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
426 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
427 8024501048 Rhizobium sp. H4 Isolate Nodule
428 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
429 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
430 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
431 8056382006 Rhizobium croatiense 13T Isolate Nodule
432 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 32.92
Metatranscriptomes 0
Isolates 67.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.17
Nodule 50.62
Rhizoplane 2.29
Rhizosphere 18.54
Stem 0
Stem Tuber 0
Unclassified 19.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000021 3300002704 Bacteria 150730
2 JGI25156J39149_1000022 3300002705 Bacteria 150730
3 JGI25154J39366_1000048 3300002738 Bacteria 126252
4 JGI25157J39369_1000025 3300002741 Bacteria 150726
5 rootH2_10043588 3300003320 Bacteria 11235
6 rootL2_10011181 3300003322 Bacteria 40364
7 rootH1_10041468 3300003323 Bacteria 8634
8 JGI25160J50197_1001053 3300003354 Bacteria 14187
9 JGI25161J50226_1002262 3300003374 Bacteria 5049
10 Ga0055524_1002229 3300003775 Bacteria 10153
11 Ga0055531_10001069 3300003794 Bacteria 21511
12 Ga0058692_1001385 3300003856 Bacteria 8966
13 Ga0058692_1001689 3300003856 Bacteria 7913
14 Ga0055543_1002512 3300004625 Bacteria 6002
15 Ga0065165_1003611 3300005262 Bacteria 10619
16 Ga0065165_1008645 3300005262 Bacteria 4718
17 Ga0070668_100133549 3300005347 Bacteria 1994
18 Ga0070665_100012315 3300005548 Bacteria 8619
19 Ga0070665_100195718 3300005548 Bacteria 2022
20 Ga0068856_100077304 3300005614 Bacteria 3298
21 Ga0075365_10025641 3300006038 Bacteria 3733
22 Ga0075368_10000462 3300006042 Bacteria 12012
23 Ga0075362_10003985 3300006177 Bacteria 5252
24 Ga0075367_10002434 3300006178 Bacteria 8501
25 Ga0075367_10028236 3300006178 Bacteria 3199
26 Ga0075369_10004298 3300006186 Bacteria 5248
27 Ga0075366_10007001 3300006195 Bacteria 6205
28 Ga0075366_10015918 3300006195 Bacteria 4317
29 Ga0079104_1000183 3300006946 Bacteria 89496
30 Ga0099826_10002305 3300006948 Bacteria 12228
31 Ga0105240_10000964 3300009093 Bacteria 51301
32 Ga0105243_10006657 3300009148 Bacteria 8919
33 Ga0105237_10000616 3300009545 Bacteria 49643
34 Ga0105239_10001913 3300010375 Bacteria 27120
35 Ga0157373_10016863 3300013100 Bacteria 5326
36 Ga0157373_10055631 3300013100 Bacteria 2810
37 Ga0157371_10000295 3300013102 Bacteria 66319
38 Ga0157370_10001443 3300013104 Bacteria 29391
39 Ga0157370_10001557 3300013104 Bacteria 28415
40 Ga0182007_10005565 3300015262 Bacteria 5515
41 Ga0228711_1000004 3300022739 Bacteria 250146
42 Ga0228710_1000002 3300022740 Bacteria 287279
43 Ga0209435_100033 3300025206 Bacteria 150395
44 Ga0207425_1001552 3300025245 Bacteria 9372
45 Ga0209646_1000116 3300025246 Bacteria 150395
46 Ga0209026_1000103 3300025250 Bacteria 152843
47 Ga0209759_1000105 3300025256 Bacteria 150395
48 Ga0209129_1000659 3300025258 Bacteria 23019
49 Ga0209233_1000403 3300025261 Bacteria 34870
50 Ga0209673_1001070 3300025273 Bacteria 31181
51 Ga0209673_1003539 3300025273 Bacteria 9127
52 Ga0209025_1000166 3300025294 Bacteria 164692
53 Ga0209025_1000964 3300025294 Bacteria 43343
54 Ga0209564_1000469 3300025295 Bacteria 67659
55 Ga0209758_1000130 3300025297 Bacteria 184456
56 Ga0209758_1000218 3300025297 Bacteria 124300
57 Ga0209758_1001563 3300025297 Bacteria 26250
58 Ga0209758_1006513 3300025297 Bacteria 8340
59 Ga0209758_1006915 3300025297 Bacteria 7921
60 Ga0209256_1002035 3300025299 Bacteria 17986
61 Ga0207426_1000039 3300025302 Bacteria 439937
62 Ga0209051_1003545 3300025303 Bacteria 10161
63 Ga0207695_10000423 3300025913 Bacteria 93807
64 Ga0207671_10000148 3300025914 Bacteria 108473
65 Ga0207702_10093807 3300026078 Bacteria 2633
66 Ga0209281_1000030 3300027111 Bacteria 425931
67 Ga0209281_1000295 3300027111 Bacteria 90994
68 Ga0209371_1000864 3300027312 Bacteria 24452
69 Ga0209282_1000004 3300027666 Bacteria 425931
70 Ga0209282_1003411 3300027666 Bacteria 9440
71 Ga0268256_1003417 3300030500 Bacteria 7160
72 Ga0315914_1000001 3300031967 Bacteria 416633
73 Ga0307414_10225339 3300032004 Bacteria 1542
74 Ga0315913_1000004 3300033430 Bacteria 192741
75 Ga0315915_1000002 3300033464 Bacteria 425854
76 Ga0373925_0012327 3300037068 Bacteria 6187
77 Ga0395905_0001358 3300037471 Bacteria 29788
78 Ga0395905_0075793 3300037471 Bacteria 3152
79 Ga0400483_204823 3300039062 Bacteria 4949
80 Ga0400483_215725 3300039062 Bacteria 6628
81 Ga0400489_05923 3300039093 Bacteria 4937
82 Ga0436360_1063799 3300039438 Unclassified 4027
83 Ga0436361_0243360 3300039447 Unclassified 2653
84 Ga0451791_0465505 3300041451 Bacteria 3008
85 Ga0451798_0471622 3300041458 Bacteria 4182
86 Ga0451833_0049965 3300041491 Bacteria 1993
87 Ga0451853_0475934 3300041512 Bacteria 4805
88 Ga0439449_0038146 3300042007 Bacteria 1787
89 Ga0495590_0035055 3300046457 Bacteria 1752
90 Ga0495638_0000220 3300046460 Bacteria 79594
91 Ga0495605_0014820 3300046474 Bacteria 4255
92 Ga0495585_0011635 3300046492 Bacteria 5204
93 Ga0495606_0030513 3300046507 Bacteria 3766
94 Ga0495610_0016957 3300046512 Bacteria 4170
95 Ga0495610_0022149 3300046512 Bacteria 3480
96 Ga0495620_0020176 3300046515 Bacteria 3260
97 Ga0495631_0006544 3300046518 Bacteria 6006
98 Ga0495631_0056176 3300046518 Bacteria 1714
99 Ga0495643_0005083 3300046522 Bacteria 8998
100 Ga0495648_0062367 3300046524 Bacteria 2208
101 Ga0495597_0018086 3300046542 Bacteria 3311
102 Ga0495668_0003300 3300046616 Bacteria 12222
103 Ga0495611_0003713 3300046648 Bacteria 6674
104 Ga0495625_0009008 3300046660 Bacteria 8430
105 Ga0495625_0096426 3300046660 Bacteria 2037
106 Ga0495649_0011908 3300046694 Bacteria 5083
107 Ga0495660_0025535 3300046810 Bacteria 3355
108 Ga0495681_0001068 3300047470 Bacteria 20894
109 Ga0496102_0012923 3300048905 Bacteria 7230
110 Ga0496103_0000938 3300048906 Bacteria 20889
111 Ga0496113_0039368 3300048916 Bacteria 3480
112 Ga0496113_0052453 3300048916 Bacteria 3046
113 Ga0496116_0020825 3300048919 Bacteria 4967
114 Ga0496117_0002215 3300048920 Bacteria 25150
115 Ga0496117_0002644 3300048920 Bacteria 22209
116 Ga0496117_0027537 3300048920 Bacteria 4426
117 Ga0496117_0060923 3300048920 Bacteria 2597
118 Ga0496118_0006075 3300048921 Bacteria 13442
119 Ga0496118_0066401 3300048921 Bacteria 2633
120 Ga0496119_0014821 3300048922 Bacteria 6066
121 Ga0496119_0072739 3300048922 Bacteria 2007
122 Ga0496120_0002700 3300048923 Bacteria 17386
123 Ga0496120_0009895 3300048923 Bacteria 6714
124 Ga0496120_0031768 3300048923 Bacteria 3192
125 Ga0496120_0113230 3300048923 Bacteria 1414
126 Ga0496121_0000836 3300048924 Bacteria 55869
127 Ga0496121_0010755 3300048924 Bacteria 10257
128 Ga0496122_0000068 3300048925 Bacteria 226155
129 Ga0496122_0000072 3300048925 Bacteria 222436
130 Ga0496122_0001113 3300048925 Bacteria 46432
131 Ga0496122_0023177 3300048925 Bacteria 5484
132 Ga0496123_0000035 3300048926 Bacteria 267288
133 Ga0496123_0000059 3300048926 Bacteria 226155
134 Ga0496123_0000911 3300048926 Bacteria 46460
135 Ga0496123_0029874 3300048926 Bacteria 4001
136 Ga0496124_0009691 3300048927 Bacteria 9861
137 Ga0496124_0022609 3300048927 Bacteria 5758
138 Ga0496124_0023883 3300048927 Bacteria 5569
139 Ga0496125_0000034 3300048928 Bacteria 348231
140 Ga0496125_0000264 3300048928 Bacteria 108134
141 Ga0496125_0010149 3300048928 Bacteria 9545
142 Ga0496125_0027735 3300048928 Bacteria 5126
143 Ga0496126_0037930 3300048929 Bacteria 4487
144 Ga0496126_0104345 3300048929 Bacteria 2476
145 Ga0495678_014028 3300049459 Bacteria 3739
146 nmdc:mga03n38_50343_c1 3300050490 Bacteria 1856
147 nmdc:mga00v17_1527_c1 3300050491 Bacteria 12075
148 nmdc:mga0k408_10631_c1 3300050493 Bacteria 4984
149 nmdc:mga04h51_7571_c1 3300050495 Bacteria 2872
150 nmdc:mga07m45_95575_c1 3300050496 Bacteria 1705
151 nmdc:mga0sz30_30999_c1 3300050516 Bacteria 2211
152 Ga0500557_004205 3300053105 Bacteria 2984
153 Ga0500572_001988 3300053111 Bacteria 5105
154 Ga0500658_0001306 3300053134 Bacteria 10092
155 Ga0500568_0000227 3300053139 Bacteria 48279
156 Ga0500573_0005534 3300053140 Bacteria 6773
157 Ga0500622_0000836 3300053156 Bacteria 26294
158 Ga0500636_0001044 3300053177 Bacteria 14856

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2842192696 2842194453 405
2 3300048922 Ga0496119_0072739 Ga0496119_0072739_74_1381 423
3 3300048923 Ga0496120_0113230 Ga0496120_0113230_19_1326 423
4 iso_pu_bacteria 2830075706 2830075786 462
5 3300039438 Ga0436360_1063799 Ga0436360_1063799_847_2316 465
6 3300039447 Ga0436361_0243360 Ga0436361_0243360_300_1769 465
7 iso_pu_bacteria 2995392953 2995396802 465
8 iso_pu_bacteria 3000017691 3000018998 466
9 3300037068 Ga0373925_0012327 Ga0373925_0012327_413_1879 468
10 3300039062 Ga0400483_204823 Ga0400483_204823_1811_3289 470
11 3300039062 Ga0400483_215725 Ga0400483_215725_4561_6033 470
12 3300039093 Ga0400489_05923 Ga0400489_05923_1139_2617 470
13 iso_pu_bacteria 2509276021 2509392607 470
14 iso_pu_bacteria 2841864319 2841866405 470
15 3300025297 Ga0209758_1001563 Ga0209758_10015635 471
16 iso_pu_bacteria 2838680041 2838682153 471
17 iso_pu_bacteria 2838694306 2838696725 471
18 iso_pu_bacteria 2838707686 2838710036 471
19 iso_pu_bacteria 2842077413 2842078209 471
20 iso_pu_bacteria 2842118031 2842119283 471
21 iso_pu_bacteria 2842237096 2842239448 471
22 iso_pu_bacteria 2842291075 2842291871 471
23 iso_pu_bacteria 2842370503 2842372720 471
24 iso_pu_bacteria 2842377471 2842378267 471
25 iso_pu_bacteria 2842384541 2842385792 471
26 iso_pu_bacteria 2935894831 2935897420 471
27 iso_pu_bacteria 2509276021 2509386624 472
28 iso_pu_bacteria 2509276021 2509392865 472
29 iso_pu_bacteria 2509276033 2509443324 472
30 iso_pu_bacteria 2510065019 2510133371 472
31 iso_pu_bacteria 2510461076 2510894756 472
32 iso_pu_bacteria 2510917022 2511136399 472
33 iso_pu_bacteria 2510917028 2511181351 472
34 iso_pu_bacteria 2510917030 2511198295 472
35 iso_pu_bacteria 2513237084 2513572440 472
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435 3300048905 Ga0496102_0012923 Ga0496102_0012923_4331_5803 476
436 3300048906 Ga0496103_0000938 Ga0496103_0000938_17977_19449 476
437 3300048916 Ga0496113_0039368 Ga0496113_0039368_1631_3100 476
438 3300048916 Ga0496113_0052453 Ga0496113_0052453_1334_2806 476
439 3300048919 Ga0496116_0020825 Ga0496116_0020825_71_1543 476
440 3300048920 Ga0496117_0002215 Ga0496117_0002215_7981_9450 476
441 3300048920 Ga0496117_0002644 Ga0496117_0002644_2263_3735 476
442 3300048920 Ga0496117_0027537 Ga0496117_0027537_687_2156 476
443 3300048920 Ga0496117_0060923 Ga0496117_0060923_328_1794 476
444 3300048921 Ga0496118_0006075 Ga0496118_0006075_11600_13072 476
445 3300048921 Ga0496118_0066401 Ga0496118_0066401_696_2162 476
446 3300048922 Ga0496119_0014821 Ga0496119_0014821_1104_2573 476
447 3300048923 Ga0496120_0002700 Ga0496120_0002700_11173_12642 476
448 3300048923 Ga0496120_0009895 Ga0496120_0009895_2894_4366 476
449 3300048923 Ga0496120_0031768 Ga0496120_0031768_181_1653 476
450 3300048924 Ga0496121_0000836 Ga0496121_0000836_124_1596 476
451 3300048924 Ga0496121_0010755 Ga0496121_0010755_1927_3393 476
452 3300048925 Ga0496122_0000068 Ga0496122_0000068_213505_214974 476
453 3300048925 Ga0496122_0001113 Ga0496122_0001113_42493_43962 476
454 3300048925 Ga0496122_0023177 Ga0496122_0023177_2394_3866 476
455 3300048926 Ga0496123_0000059 Ga0496123_0000059_11182_12651 476
456 3300048926 Ga0496123_0000911 Ga0496123_0000911_42521_43990 476
457 3300048926 Ga0496123_0029874 Ga0496123_0029874_104_1576 476
458 3300048927 Ga0496124_0009691 Ga0496124_0009691_644_2113 476
459 3300048927 Ga0496124_0022609 Ga0496124_0022609_1668_3140 476
460 3300048927 Ga0496124_0023883 Ga0496124_0023883_1985_3457 476
461 3300048928 Ga0496125_0000034 Ga0496125_0000034_253467_254939 476
462 3300048928 Ga0496125_0000264 Ga0496125_0000264_2471_3940 476
463 3300048928 Ga0496125_0010149 Ga0496125_0010149_6961_8430 476
464 3300048928 Ga0496125_0027735 Ga0496125_0027735_2117_3589 476
465 3300048929 Ga0496126_0037930 Ga0496126_0037930_1269_2741 476
466 3300048929 Ga0496126_0104345 Ga0496126_0104345_296_1768 476
467 3300049459 Ga0495678_014028 Ga0495678_014028_151_1617 476
468 3300050490 nmdc:mga03n38_50343_c1 nmdc:mga03n38_50343_c1_39_1505 476
469 3300050491 nmdc:mga00v17_1527_c1 nmdc:mga00v17_1527_c1_1383_2855 476
470 3300050493 nmdc:mga0k408_10631_c1 nmdc:mga0k408_10631_c1_3007_4476 476
471 3300050495 nmdc:mga04h51_7571_c1 nmdc:mga04h51_7571_c1_1311_2780 476
472 3300050496 nmdc:mga07m45_95575_c1 nmdc:mga07m45_95575_c1_103_1572 476
473 3300050516 nmdc:mga0sz30_30999_c1 nmdc:mga0sz30_30999_c1_57_1523 476
474 3300053105 Ga0500557_004205 Ga0500557_004205_1080_2546 476
475 3300053111 Ga0500572_001988 Ga0500572_001988_2271_3740 476
476 3300053134 Ga0500658_0001306 Ga0500658_0001306_413_1879 476
477 3300053139 Ga0500568_0000227 Ga0500568_0000227_24297_25763 476
478 3300053140 Ga0500573_0005534 Ga0500573_0005534_4898_6364 476
479 3300053156 Ga0500622_0000836 Ga0500622_0000836_9653_11119 476
480 3300053177 Ga0500636_0001044 Ga0500636_0001044_714_2183 476

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00370

FGGY_N

FGGY family of carbohydrate kinases, N-terminal domain

7

249

0.97

PF02782

FGGY_C

FGGY family of carbohydrate kinases, C-terminal domain

258

446

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5azi-assembly1.cif.gz_A crystal structure of glycerol kinase from trypanosoma brucei gambiense complexed with 4np 0.9482 1 467
5gn5-assembly1.cif.gz_B crystal structure of glycerol kinase from trypanosoma brucei gambiense complexed with cumarin derivative-17 0.944 1 467
3ezw-assembly1.cif.gz_G crystal structure of a hyperactive escherichia coli glycerol kinase mutant gly230 --> asp obtained using microfluidic crystallization devices 0.9433 3 466
2d4w-assembly1.cif.gz_B crystal structure of glycerol kinase from cellulomonas sp. nt3060 0.9339 3 465
5azi-assembly1.cif.gz_A crystal structure of glycerol kinase from trypanosoma brucei gambiense complexed with 4np 0.9289 1 467
ID Description Score Start End Superfamily
af_Q9W095_30_285_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9604 3 242 3.30.420.40
4e1jB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9595 3 242 3.30.420.40
af_Q63060_9_266_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9441 3 240 3.30.420.40
1gleG01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9375 3 242 3.30.420.40
2w40C01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.935 1 242 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A4R9B0T7-F1-model_v4 Glycerol kinase 0.9727 3 103 GO:0004370
GO:0005829
GO:0019563
AF-A0A1U9YWL9-F1-model_v4 ATP:glycerol 3-phosphotransferase 0.9723 2 470 GO:0004370
GO:0005829
GO:0019563
AF-A0A7W1AMH5-F1-model_v4 Glycerol kinase 0.972 1 268 GO:0004370
GO:0005829
GO:0019563
AF-A0A3B9XVS2-F1-model_v4 Glycerol kinase 0.9695 3 273 GO:0004370
GO:0005829
GO:0019563
AF-A0A841MPF0-F1-model_v4 deleted 0.9691 3 218

Feature Viewer

pLDDT pTM Quality
90.39 0.9 High
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Predicted Structure (AlphaFold2)

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